ID:dsi_22715 |
Coordinate:3r:10256079-10256228 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
CDS [3r_10256229_10256320_+]; exon [3r_10256229_10256683_+]; intron [3r_10255795_10256228_+]
No Repeatable elements found
| --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## GCAACTTTAGATTTGCTCTTGAGTGTAATTCTATCATATTTGCTGATAAAGCCTAATAGACAACTAATGTTTTTAGCAACCGAATTAGAATGCATATACCTTCAAGGCGAAAATGAAAATATTTAACTAATGAGCGATGTTGCTGATACTATAGAAACGATAAATGCATGTCTAATAATGTTTATAATGTTTATCACCAGGGCACACCACTCCAGCTCCATCGGTTCACGGTTCGGATGACGAGGACTCC **************************************************.....(((((((.((((.....)))).(((...((((((((((((...(((...)))......................((.((((....)))).))................)))))).))))))...))).....)))))))......************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
SRR553488 RT_0-2 hours eggs |
M023 head |
SRR902008 ovaries |
SRR553487 NRT_0-2 hours eggs |
SRR553486 Makindu_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................................................................................................................AGCTCCATCGGTTCACGGTTCGGATGA.......... | 27 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ........................................................................................................................................................................................................................TCCATCGGTTCACGGTTCGGATGACGAA...... | 28 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| ..............................................................................................................................................................................................................................GGTTCACGGTTCGGATGAC......... | 19 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ..................................................................................................................................................................................................................TCCAGCTCCATCGGTTCACGGTTCGGA............. | 27 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................................................................................................................................................................ACACCACTCCAGCTCCATC............................ | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................................................................................................................................................................................................GGATGACGAGGACTCC | 16 | 0 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................................................................................................................................................TGTTTAGCACCAGGG................................................ | 15 | 1 | 5 | 0.20 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................TATCATATTTGCTGA............................................................................................................................................................................................................ | 15 | 0 | 5 | 0.20 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ........................................................................................................................................................................TGACTAATAATGTTTA.................................................................. | 16 | 1 | 9 | 0.11 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| ..........................................................................AGCAACCGACTTAGAAC............................................................................................................................................................... | 17 | 2 | 10 | 0.10 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| ...................................................................................................................................................................ATGCATGTCTAAAAA........................................................................ | 15 | 1 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| .................................TCATATTTGCTGAGA.......................................................................................................................................................................................................... | 15 | 1 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
|
CGTTGAAATCTAAACGAGAACTCACATTAAGATAGTATAAACGACTATTTCGGATTATCTGTTGATTACAAAAATCGTTGGCTTAATCTTACGTATATGGAAGTTCCGCTTTTACTTTTATAAATTGATTACTCGCTACAACGACTATGATATCTTTGCTATTTACGTACAGATTATTACAAATATTACAAATAGTGGTCCCGTGTGGTGAGGTCGAGGTAGCCAAGTGCCAAGCCTACTGCTCCTGAGG
**************************************************.....(((((((.((((.....)))).(((...((((((((((((...(((...)))......................((.((((....)))).))................)))))).))))))...))).....)))))))......************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M024 male body |
SRR553486 Makindu_3 day-old ovaries |
SRR902009 testis |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................................................................................CGAGGTAGCCAAGTGCCAAGC............... | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| .....................................................................AAAAATCGTTGCCTTAAACT................................................................................................................................................................. | 20 | 2 | 2 | 0.50 | 1 | 0 | 0 | 1 | 0 |
| .......................................................................................................................................................................................................................................AAGGCTACTGCTCCGGAG. | 18 | 2 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 |
| .......................................................................................................................................................................................................................................AAGGCTAATGCTCCTGAG. | 18 | 2 | 6 | 0.17 | 1 | 0 | 1 | 0 | 0 |
| ....................................................................................AATCTTCTGTATATGGA..................................................................................................................................................... | 17 | 2 | 14 | 0.07 | 1 | 0 | 1 | 0 | 0 |
| ...................................................................................................................................................................................................TGGTCGCGTATGATGAGGT.................................... | 19 | 3 | 16 | 0.06 | 1 | 0 | 0 | 0 | 1 |
| .......................................................................................................................................................................................................................................AAGGCTAATGCTCCTGAGA | 19 | 3 | 18 | 0.06 | 1 | 0 | 1 | 0 | 0 |
| ......................................................................................................................................................................................................................................CAAGGCTAATGCTCCGGAG. | 19 | 3 | 20 | 0.05 | 1 | 0 | 1 | 0 | 0 |
Generated: 04/24/2015 at 10:39 AM