ID:

dsi_22667

 Coordinate:

3l:7123181-7123464 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-34.5 -34.5 -34.5

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
(CA)nSimple_repeatSimple_repeat+

Sense Strand Reads

TATCTGAGATAAATAACGCGCAGCAAAAGCAACTATTTTTAGCGGATTACGTGAGTGTCATTTGAATTTTTTCGGCGTGAAGTATACGCCCGATCTGCTGGCGAAAAAAAAAGAAAAAGAAAAGAACAAACAGAGTGCTGACCAAATTTGCTGGCCATCTGTATGTGTGTGTGTCTAAGCCAAAGTGTGTGCGCGAGTGTGTTTGTGTGTGTGTGTATTTGTGTGTTGGCCAGCTCCAAAACCTGCTGCTATTATTAGCCTTAGCCAAGATTATGGGCGATTTCATTATGGCGCTGCAATTTGCTGTGCCGCCGCAAAAAGCGAAACAAAAATGTAAAACAGCAGTGCCCGGGCCAAGAAGATTTGAGCCAAGTTAGACGAGTT
***********************************************************************************************************************......(((((((...(((..((((.....(((((((((..........))).)))..))).....)).))..)))....)))))))((((..(((...((((((.(((((((((..........))))(((....))).....))))).)).....))))...)))....))))..**************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 M023
head
 GSM343915
embryo
 M024
male body		 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
....................................................................................TACGCCCGATCTGATGG........................................................................................................................................................................................................................................................................................... 17 1 1 3.00 3 3 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GATTTCATTATGGCGCTG........................................................................................ 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................CTGCCGAAATTTGCTGGCGATCTG............................................................................................................................................................................................................................... 24 3 1 1.00 1 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................GTGCCCGGGCCAAGAAGATTTGA................. 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.......................................................................................................................AAAAGAACAAACAGAGTGCTGA................................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...............................ACTATTTTTAGCAGATTAG.............................................................................................................................................................................................................................................................................................................................................. 19 2 2 0.50 1 0 0 0 0 1 0 0 0 0
................................................................................................GCTGGCGAAAAAAAA................................................................................................................................................................................................................................................................................. 15 0 8 0.38 3 0 3 0 0 0 0 0 0 0
......................................................................................................................................................................GTGTGTGTCTAAGGCA.......................................................................................................................................................................................................... 16 1 3 0.33 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTGTGTTTTTGTGTGTTGG........................................................................................................................................................... 20 1 10 0.20 2 0 0 0 0 0 2 0 0 0
.............................................................................................TCTACTGGAGAAAAAAAAA................................................................................................................................................................................................................................................................................ 19 2 13 0.08 1 0 0 0 0 0 0 0 1 0
.................................................................................................................................................................................................CGAGTCTGTTTGTGAGTGTGTG......................................................................................................................................................................... 22 2 13 0.08 1 0 0 0 0 0 0 1 0 0
...............................................................................................................................................................................................................................................................TATCCTTAGCCAAGA.................................................................................................................. 15 1 14 0.07 1 0 0 0 0 0 0 0 0 1
..........................................................................................................AAAAAAGAAAAAGAGAAGTTCA................................................................................................................................................................................................................................................................ 22 3 20 0.05 1 0 0 0 0 0 0 1 0 0
.....................................................................................................AGACGAAAAAAGAAAAAGAAAAGA................................................................................................................................................................................................................................................................... 24 3 20 0.05 1 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................TCTGTATGTGTGTGTG................................................................................................................................................................................................................... 16 0 20 0.05 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................AAACAGAGTTCTGACAA................................................................................................................................................................................................................................................ 17 2 20 0.05 1 1 0 0 0 0 0 0 0 0
...............................ACTATTTTTAGCAGATTAGT............................................................................................................................................................................................................................................................................................................................................. 20 3 20 0.05 1 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

ATAGACTCTATTTATTGCGCGTCGTTTTCGTTGATAAAAATCGCCTAATGCACTCACAGTAAACTTAAAAAAGCCGCACTTCATATGCGGGCTAGACGACCGCTTTTTTTTTCTTTTTCTTTTCTTGTTTGTCTCACGACTGGTTTAAACGACCGGTAGACATACACACACACAGATTCGGTTTCACACACGCGCTCACACAAACACACACACACATAAACACACAACCGGTCGAGGTTTTGGACGACGATAATAATCGGAATCGGTTCTAATACCCGCTAAAGTAATACCGCGACGTTAAACGACACGGCGGCGTTTTTCGCTTTGTTTTTACATTTTGTCGTCACGGGCCCGGTTCTTCTAAACTCGGTTCAATCTGCTCAA
****************************************************************************************......(((((((...(((..((((.....(((((((((..........))).)))..))).....)).))..)))....)))))))((((..(((...((((((.(((((((((..........))))(((....))).....))))).)).....))))...)))....))))..*********************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 M053
female body
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
 M025
embryo
 SRR618934
dsim w501 ovaries
...............................................................................................................................................................................................................................................................................................................................................................CCGGTTCTTCTAAGCTTG............... 18 2 8 35.88 287 181 97 6 1 1 1 0
..............................................................................................................................................................................................................................................................................................................................................................CCCGGTTGTTCTAATCTCAGTT............ 22 3 2 0.50 1 0 1 0 0 0 0 0
.......................................................................................CGGGCTATACGACCGTTTTT..................................................................................................................................................................................................................................................................................... 20 2 2 0.50 1 1 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................................CTAAACTTGGTTGTATCTGC.... 20 3 6 0.33 2 0 2 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................................CCGGTTCTTCTAATCTTG............... 18 2 4 0.25 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................CTTTGTTGTTTCATGTTGTCGT........................................ 22 3 5 0.20 1 0 0 0 1 0 0 0
............................................................................................................TCTTCTTTTTCTTTTATTGTTT.............................................................................................................................................................................................................................................................. 22 2 6 0.17 1 0 0 0 0 1 0 0
..........................................................................................................................................................................................................................................AGGTTTTGGACGCCG....................................................................................................................................... 15 1 8 0.13 1 0 0 0 1 0 0 0
.......CGATTTAGTGCGCGTCGTTG..................................................................................................................................................................................................................................................................................................................................................................... 20 3 9 0.11 1 0 0 1 0 0 0 0
....ACTCTATTTGTTGTGCGCC......................................................................................................................................................................................................................................................................................................................................................................... 19 3 20 0.10 2 0 0 0 0 0 0 2
...........................................................................................................................................................................................................................................GGTTTTGAACGAAGATAA................................................................................................................................... 18 2 13 0.08 1 0 0 0 0 1 0 0
..........................................................................................................................TCTTGTTGGTCTCAC....................................................................................................................................................................................................................................................... 15 1 15 0.07 1 0 0 0 1 0 0 0
...........................................................................GGACTCCATATGCGGG..................................................................................................................................................................................................................................................................................................... 16 2 18 0.06 1 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:7123131-7123514 - dsi_22667 T----------AT-CTGAGAT--AAATAACGCGCA-----------------------GCAAAAGCAACTATTTTTAGCGGATTACGTGAGTGTCATTTGAATTTT-------------TTCGGCGTGAAGTATACGCCCGATCTGCTGGCGAAAA----A--------AA--A-A---GAAAAAG-AA--AAGAACAA---ACAGAGTGCTG---------------------------------------------ACCAAATTTGCTGG-CCAT--CT-----------GT------A----T--GTGTGT---------------------------GTGTCTAAGCCAAAGT-----------------G--------TGTGCGCGAGTGTG--------TTT--------GTGTGTGTGTGTATTTGT--------------------------------------GTGTTG--------------------GCCAGC----------------------TCCAAAACCT--GCTGCTATTATTAGCCTTAGCCAAGATTATGGGCGATTTCATTATGGCGCTGCAATTTGCTGTGCCGCCGC-------------------------------------------------AAAAAGCGAAAC-----------AAAAATGTAAAA---C---AGCAGT--GCCCGGGCCA-----AGAAGATT--------T----GAGCCAAG-TTAGACG-AGTT------------------------
droSec2 scaffold_2:7182568-7182947 - T-------------CTGAGAT--AAATAACGCGCA-----------------------GCAAAAGCAACTATTTTTAGCGGATTACGTGAGTGTCATTTGAATTTT-------------TTCGGCGTGAAGTATACGCCCGATCTGCTGGCGAAAA----A--------AA--A-A---GAAAAGG-AA--AAGAACAA---ACAGAGTGCTG---------------------------------------------ACCAAATTTGCTCG-CCAT--CT-----------GT------A--------TATGT---------------------------GTGTCTAAGCCAAAGT-----------------G--------TGTGCGCGAGTGTG--------TTT--------GTGTGTGTGTGTATTTGT--------------------------------------GTGTTG--------------------GCCAGC----------------------TCCAAAACCT--GCTGCTATTATTAGCCTTAGCCAAGATTATGGGCGATTTCATTATGGCGCTGCAATTTGCTGTGCCGACGC-------------------------------------------------AAAAAGCGAAAC-----------AAAAATGTAAAA---C---AGCAGT--GTCCGGGCCA-----AGAAGATT--------T----GAGCCAAG-TTAGACG-AGTT------------------------
dm3 chr3L:7256517-7256892 - A----------AT-CTGAGAT--AAATAACGCGCA-----------------------GCAAAAGCAACTATTTTTAGCGGATTACGTGAGTGTCATTTGAATTTT-------------TTCGACGTGAAGTATACGCCCGATCTGTTGGCGAGAA----A--------AA-TA-A---GAAAAAG-AA--AAGAACAA---ACAGAGTGCTG---------------------------------------------GCCAAATTTGCTCG-CCAT--CT-----------GT------A----TGTGTCT-----------------------------GTGTCTAAGCCAAAGT-----------------G--------TGT--GCGAGTGT--------------------GTTTGTGTGTGTATTTGT--------------------------------------GTGTTG--------------------GCCAGC----------------------TCCAAAACCT--GCTGCTATTATTAGCCTTAGCCAAGATTATGGGCGATTTCATTATGGCGCTGCAATTTGCTGTGCCGCCGC-------------------------------------------------AAAAAGCGAAAC-----------AAAAATGTAAAA---C------AGT--GCCTGGGCCA-----AGAAGATT--------T----GAGCCGAG-TTAGACG-AGTT------------------------
droEre2 scaffold_4784:4086436-4086817 + A----------AT-CTGAGAA--AAATAACGCGCA-----------------------GCAAATTCAACTATTTTTAGCGGATTACGTGAGTGTCATTTGAATTT--------------TTCGGCGTGAAGTATACGCCCGATCTGCTGGCGAGAA----ATAGCCGAAGAAT----AA-------A--AA-AG----A---ACAGAGTGCTG---------------------------------------------GCCAAATTTGCTCA-CCATTTCT-----------GT------A--------TGTGTGTGTGTGTGAGTGTGTGGTGTGCGTGTGTGTCTAAGCCAAAGT-----------------------------------------------------------------GTGTGTATTTGT--------------------------------------GTGTTG--------------------TCCAAC----------------------TCCAAAACCT--GCTGCTATTATTAGCCTTAGCCAAGATTATGGGCGATTTCATTATGGCGATGCAATTTGCTGTGCCGCCGC-------------------------------------------------AAAAAGCGAAAC-----------AAAAATGTAAAA---C------AGA--GCTTAGGCCG-----AGAAGATT--------T----GAGCTGAG-TTAGACG-AGTT------------------------
droYak3 3L:7858407-7858804 - GCAAACGAAAAAT-CTGAGAA--AAATAACGCGCA-----------------------ACGAAATCAACTATTTTTAGCGGATTACGTGAGTGTCATTTGAATTTT-------------TTCGGCGTGAAGTATACGCCCGATCTGCTGGCGAGAA----TTAACCAACGAAT----AA-------A--AA-AGAACAA---ACAGAGTGTTG--------------------------------------------GGCCAAATTTGCTCA-CCAT--CTA----CG----GT----GT--GTGT--GTGTGT---------------------------GTGTCTAAGCCAAAGT-----------------G--------TGT--GCGAGTGTGT------------------GTTTGTGTGTATATTTGT--------------------------------------GTGTTG--------------------TCCAAC----------------------TTCAAAACCT--GCTGCTATTATTAGCCTTAGCCAAGATTATGGGCGATTTCATTATGGCGATGCAATTTGCTCTGCCGCCGC-------------------------------------------------AAAAAGCGAAAC-----------AAAAATGTAAAA---C------AGA--GCTTAGGCCG-----AGAAGATT--------T----GAGCTGAG-TTAGACG-AGTT------------------------
droEug1 scf7180000409006:215867-216213 + A----------A----------------------------------------------------TCAACTATTTTTAGCGGATTACGTGAGTGTCATTTGAATTTT-------------TTCGGCGTGAAGTAAACGCCTAACCCGCTGGCGAGAA----A--------AAAT----AA-------A--AC-AGAACAA---ACAGAGTGCTG---------------------------------------------GCCAAATTTGCTCA-CCAT--CT-----------GT------A----T--ATCT-----------------------------GTGTCTAAGCCAGAGT-----------------T--------TGT-CGT---TGTG--------TCTATGTGTGTGTGTG--------TGTGT--------------------------------------GTGTTG--------------------GCCAGC----------------------TCCAAAACCT--GCTGCTATTATTAGCCTTAGCCAAGATTATGGGCGATTTCATTATGGCGCTGCAATTTGCTGTGCCGCCGC-------------------------------------------------AAAAA---TACC-----------AAAAA---AAAACAATATAAGCAAA--GTTTAGGCCG-----AGAAGATT--------T----GAGCTAAG-TTAGACG-AGTT------------------------
droBia1 scf7180000302193:6175487-6175819 - G---------------------------GCGCGCA-----------------------GTAAATTCAACTATTTTTAGCGGATTACGTGAGTGTCATTTGAATTTT-------------TTCGGCGTGAAGTTTACGCCCGATCTGCTGGCCAGCG--------------GGA----AA-------A--AC-AG----A---ACAGAGTGCTG---------------------------------------------GCCAAAATTGCTCA-CCAT--CT-----------GT------A--------TCT-----------------------------GTGTCTAAGGCAG--T-----------------G------------------TG--T--------------GCTTGTGTG--------TGTGT--------------------------------------GTGTTG--------------------GCCAGC----------------------TCCAAAACCT--GCTGCTATTATTAGCCTTAGCCAAGATTATGGGCGATTTCATTATGGCGCTGCAATTTGCTGAGCCGCCGC-------------------------------------------------ACAA------AC-----------AAAAATA--AAAAAACTGAAACCGA--GCTTAGGCCG-----AGAAGATT--------T----GAGCTTAG-TTAGACG-AGTT------------------------
droTak1 scf7180000415773:421609-421944 + C----------A-----------AAAAAACGCGCA-----------------------GCAAATTCAACTATTTTTAGCGGATTACGTGAGTGTCATTTGAATTTT-------------TTCGGCGTGAAGTATACGCCCGATCTGCTGGGCAGAA----A--------AA--AATGGA-------A--AC-AG----A---ACGGAGTGCTG---------------------------------------------GCCAAATTTGCTCA-CCAT--CT-----------GT------A--------TCT-----------------------------GTGTCTAAGCTAA-GT-----------------G--------------------------------------TGTGTTTG--------TGTGT--------------------------------------GTGTTG--------------------GCCAGC----------------------TCCAAAACCT--GCTGCTATTATTAGCCTTAGCCAAGATTATGGGCGATTTCATTATGGCGCTGCAATTTGCTGTGCCGCCGC-------------------------------------------------AAAAA---AACC-----------AAAAAAGAAAAA---C------CGA--GCTTAGGCCG-----AGAAGATT--------T----GAGCTTAG-TTAGACG-AGTT------------------------
droEle1 scf7180000491255:165938-166296 + C----------AA----------ACAAAACGCGTA-----------------------GCAAATTCAACTATTTTTAGCGGATTACGTGAGTGTCATTTGAATTTT-------------TTCGGCGTGAAGTATACGCCCGATCTGCTGGCGAGAA----A--------AA--A------------A--AT-AG----A---ACAGAGTTCCG---------------------------------------------TCCAAATTTGCTCA-CCAT--CT-----------GT------A--------TCT-----------------------------GTGTCTAAGCCAGAGTTTT--CTATATGTA----------------TGTGTGTG--TGTTCGAGTGA----GTGTGTTGG--------TGTGT--------------------------------------GTGTTG--------------------GCCAGC----------------------TCCAAAACCT--GCTGCTATTATTAGCCTTAGCCAAGATTATGGGCGATTTCATTATGGCGCTGCAATTTGCTGAGCCGCCGC-------------------------------------------------AAAAA-----AC-----------AAAA-----AAA---C------CAATGGTTTGGGCCG-----AGAAGATT--------T----GAGCTTAG-TTAGACG-AGTT------------------------
droRho1 scf7180000766916:63050-63422 - A----------C----GAAAACACAAAAACGGGCA-----------------------GCAAATTCAAC-ATTTTTAGCGGATTACGTGAGTGTCATTTGAATTTT-------------TTCGGCGTGAAGTATACGCCCGATCTGCTGGCGAGAA----A--------GA--AA---A-------A--AT-AG----A---ACAGAGTGCTG---------------------------------------------GCCAAAATTGCTCA-CCAT--CT-----------GT------A--------TCT-----------------------------GTGTCTAAGCCAGAGCTTTGCCTGTGTGT------------------GCGAGTGTGTGTGCC----------AGTGTGTG--------TGTGT--------------------------------------GTGTTG--------------------GCCAGC----------------------TCCAAAACCT--GCTGCTATTATTAGCCTTAGCCAAGATTATGGTCCATTTCATTATGGCGCTGCAATTTGCTGAGCCGCCGC-------------------------------------------------AGAAA---A-ACACAAAAACGCCAAA----AAAAA---T------AGA--GTTTGGGCCG-----AGAAGATT--------T----GAGCTTAG-TTAGACG-AGTT------------------------
droFic1 scf7180000453839:1262667-1263014 - A----------C-----------AAAAAACGCGCA-----------------------GTAAATTCAACTATTTTTAGCGGATTACGTGAGTGTCATTTGAATTTT-------------TTCGGCGTGAAGTAAACGCCCGACTTG--------AA----A--------AA--AA---A-------AAC--AAGAACAA---ACAGAGTGCTG---------------------------------------------GCCAAATTTGCTCA-CCAT--CT-----------GT------A--------TCT-----------------------------GTGTCTAAGCCAGAGT-----------------T--------TTGTCGTGTGTG--T--------------GTGTGTGTG--------TGTGT--------------------------------------GTGTTG--------------------GCCAGC----------------------TCCAAAACCT--GCTGCTATTATTAGCCTTAGCCAAGATTATGGGCGATTTCATTATGGCGCTGCAATTTGCTGTTCCGCCGC-------------------------------------------------AAAAAAAAAAAT-----------ACAAAAAAAAAA---C------TAA--CTTTAGGCCG-----AGAAGATT--------T----GAGCTAAG-TTAGACG-AGTT------------------------
droKik1 scf7180000302329:36377-36705 - A-----------------------AAAAGCGCGCA-----------------------GTAAATTCAACTATTTTTAGCGGATTACGTGAGTGTCATTTGAATTTT-------------TTCGGCGTGAAGTATACGCCCGATCGGCTGGCGAGAA----A--------AA--A---------------AC-AGAACAAACAACGGAGTGTTG---------------------------------------------GCCAAATTTGCTAA-CCAT--CT-----------GT------AAATGT--ATCT-----------------------------GTGTCTAAGCCAGAGT-----------------C--------TGTATCCGAG----------------------TGTGTG--------TGTGT--------------------------------------GTGTTG--------------------GCCAGC----------------------TCCAAAACCT--GCTGCTATTATTAGCCTTAGCCAAGATTATGGGCGATTTCATTATGGCGCTGCAATTTGCTGTGCCGCCGC---------------------------------------------------------------------------------------C------AGA--GTTTGGGCCG-----AGAAGATT--------T----GAGCTTAG-TTAGACG-AGTT------------------------
droAna3 scaffold_13337:14712886-14713222 - A----------AC-C--------AACAATCGCGCA-----------------------GTAAATTCAACTATTTTTAGCGGATTACGTGAGTGTCATTTGAATTTT-------------TTCGGCATGAAGTATACGCCCGATCTGTAAGCGAGAA----A--------AA--A---------------AA-AGAACAA---ACAGAGTATTG---------------------------------------------GCCAAATTTGTTAG-CCAT--CT-----------GT----GC--TAGT--ATCTGT---------------------------GTGTCTAAGCCAGAGT-----------------G--------TACTTAAGAGTGTG--------TGT--------GCTTGTGTGTGTGTGTGT--------------------------------------GTGTGG--------------------G---------------------------TCCAAAACCT--GCTGCTATTATTAGCCTTAGCCAAGATTATGGGCGATTTCATTATGGCGCTGCAATTTGCTGGGCAGCC-------------------------------------------------------------------------------------------------------------CGAAAACAGAAGATT--------TTTGCGAGCTTAGCTTAGACG-GGTT------------------------
droBip1 scf7180000396390:208569-208892 - T----------T----AAAAAAAAACAAGCGCGCA-----------------------GTAAATTAAACTATTTTTAGCGGATTACGTGAGTGTCATTTGAATTTT-------------TTCGGCGTCAAGTATACGCCCGATCTGTAGGCAAGAA----A--------AA--A------------------AGAAAAA---TATGAGTATTG---------------------------------------------GGCAAATTTGTTAG-CCAT--CT-----------GT----GA--GAGT--TTCTGT---------------------------TTGTCTAAGCCAGAGT-----------------G--------TAT--CTAAGAG--------------------TGTTTG----------TGT--------------------------------------GTGTG-------------------------GG----------------------TCCAAAACCT--GCTGCTATTATTAGTCTTAGCCAAGATTATGGGCGATTTCATTATAGCGCTGCAATTTGCTGGGCAGCCCG-------------------------------------------------AAAA-------------------------------------------------------C-----AGAAGATT--------TTTGCCAGCATTGCTTAGACG-GGTT------------------------
dp5 XR_group8:3347356-3347729 - -----------------------------CGCGCA-----------------------ATAAATTCCACTATTTTTAGCATATTACGTGAGTGTCATTTGAATTTG-------------TT--GCGTGAAGTGTAGCCCCGGTCCGGGGGCAA--------------------------------------AAGAACAA---ACAGAGTTATA---------------------------------------------CCCAAATTTGTTCA-CCAT--TTGGCTA-ACTCTGTGCCTGC--TTGT--CTCT------------------------------------------------------GTGTATGTG----------------------T------------------GTCTCTGTGTGCGAGTGT--------------------------------------CTGTTG--------------------GCCAGC----------------------TCCAAAACCT--GCTGCTATTATTAGCCTTAGCCAAGATTATGGGCGATTTCATTATGGCGCTGCAATTTGCTGTGCTGCCGCCAGCCCCAGTCCCAGCCCCAGCTCCAGCCCCAGCTCCAGTCCCAGTCCCAGAA-----------------------------------------AGA--GTTTGGGCCG-----AGAAGATTTTAGAGTTT----GAGTTTGG-TTAGACG-AGTT------------------------
droPer2 scaffold_65:151309-151694 - -----------------------------CGCGCA-----------------------ATAAATTCCACTATTTTTAGCATATTACGTGAGTGTCATTTGAATTTG-------------TT--GCGTGAAGTGTAGCCCCGGTCCGGGGGCAA--------------------------------------AAGAACAA---ACAGAGTTATA---------------------------------------------CCCAAATTTGTTCA-CCAT--TTGGCTA-ACTCTGTGGCTGC--TTGT--CTCT------------------------------------------------------GTGTGTGTGTGTCTCTGTGT--GTG--TG----------TGT--------GTGTGTGTGTGCGAGTGT--------------------------------------CTGTTG--------------------GCCAGC----------------------TCCAAAACCT--GCTGCTATTATTAGCCTTAGCCAAGATTATGGGCGATTTCATTATGGCGCTGCAATTTGCTGTGCTGCCGCCAGTCCCAGTCCCAGTCCCAGCCCCAGCTCCAGCTCC------AGTCCCAGAA-----------------------------------------AGA--GTTTGGGCCG-----AGAAGATTTTAGAGTTT----GAGTTTGG-TTAGACG-AGTT------------------------
droWil2 scf2_1100000004511:9095055-9095322 - A----------AA-C---------GAAAAA----------------------------------------------------------------------------------------------------------------------GGAGAGAA----A--------AA--A---------------AT-------------------------------------------------------TGTTTCTAACAAGCAAAAATTGCTAAGCCCT--TTGGCTATAATGTGCATGTGT--TTGA--CTCT------------------------------------------------------GTGTGTGTG----------TGTGCGAA----------------------TGTGTG--------TGTGTGTGTTGGCGTCTTGATGTATTGGTGTGCTGTTGTATATGTGTTG--------------------GC---------------------------CGAAAACCT--GCTGCTATTATTAGCCTAAGCCAAGA-------------GATTATAAGGCTGCAATTTGCTGAAA----AC-------------------------------------------------AACAACAACAAC-----------AAAAATA----A---C------AAC--GAAAAAGCAG-----ACAAGTTT--------T----GCCC-----------------------------------------
droVir3 scaffold_13049:2394915-2395246 - A----------AACTTGAAAA---AAAAAAACACA----------TTTATATATACATATATATTCAACTATTTTTAGCGTATTACGTGAGTGTCATACGAATTTGGGCAGTTGAGCTTTTGAGC---------------GAG----TGTCGAGCGAAAAA--------A----------------------AAAACAA---AAAATGTGTTAAATAGCGTACACTGTAC---------AGCAAA-TGCTTCTAACAAGC-------GCT-G-CCCT--TT-----------GT----GG--GCG----TCT-----------------------------GT-----------------------GTGTGTGTG----------T--GTG--TG----------TGT--------GTGTGTGTGTGTGTATGT--------------------------------------CTGTAG--GCGCATAACTTAGCTTGAGCCAAG----------------------CCAAAAACCT--GCTGCTATTATTAGCCTTAGCCAAGATTATGGCCGATTTG------------------GC----------------------------------------------------------------------------------------------------------------------TG-----AAAAAA--------------------------AAATG-AGTT------------------------
droMoj3 scaffold_6654:1484582-1484903 + A----------AC-TCGAAAA--AAAAAGTGAGCAGGCAGCAGCA-------ATAC--GTATATTCAACTATTTTTAGCGCATTACGTGAGTGTCATACGAATTTG-------------GCAGC--------------------TGAGCGCAAGCA----A--------CA--A---------------AA-AAAGCAAACACAAATGTGCTAAATAGTGTACACTGTACTACAGGCCCAACAAAGTCTTTCTAACAAGC-------GCT-G-CCCT--TT-----------GG------C--------TAT------------------------------------------------------GTGTGTGTG----------T------GTG--T--------------GTGTGTGTG--------TGTGT--------------------------------------GTGTTGAGGCGCATAACTCAGCTTGAGCCAAGCCAAAAAAAAAAAAAAACAAAATACAAAACCT--GCTGCTATTATTAGCTTAAGCCAAGATTATGGCCGATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_4789:4602-4781 - C----------GT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT------GTG------TGT-----------------------------GTGTGTGTGCGTGTGT-----------------GTGTG----TGTGTGTGTGTG--T--------------GTTTGTGTG--------TGTGT----------------GTGTTTGT--------------GTGT-G--------------------CCAAGT----------------------TCTGGATTCTTTATCGCTCGTCTCATCCTCATCCAATG----GGGCAATGATGTTGCTTGGTTGCATGTCGCC----------------------------------------------------------------------------------------------------------------------------------------------------C-------AA--GAGGTCCTGGATAAAAAAGAGATGTAAAAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
T----------AT-CTGAGAT--AAATAACGCGCA-----------------------GCAAAAGCAACTATTTTTAGCGGATTACGTGAGTGTCATTTGAATTTT-------------TTCGGCGTGAAGTATACGCCCGATCTGCTGGCGAAAA----A--------AA--A-A---GAAAAAG-AA--AAGAACAA---ACAGAGTGCTG---------------------------------------------ACCAAATTTGCTGG-CCAT--CT-----------GT------A----T--GTGTGT---------------------------GTGTCTAAGCCAAAGT-----------------G--------TGTGCGCGAGTGTG--------TTT--------GTGTGTGTGTGTATTTGT--------------------------------------GTGTTG--------------------GCCAGC----------------------TCCAAAACCT--GCTGCTATTATTAGCCTTAGCCAAGATTATGGGCGATTTCATTATGGCGCTGCAATTTGCTGTGCCGCCGC-------------------------------------------------AAAAAGCGAAAC-----------AAAAATGTAAAA---C---AGCAGT--GCCCGGGCCA-----AGAAGATT--------T----GAGCCAAG-TTAGACG-AGTT------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTCATTATGGCGCTG.......................................................................................................................................................................................................1811.00110000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT--GCCCGGGCCA-----AGAAGATT--------T----GA...........................................2311.00100000000000100000
...........................................................................................................................................................................................AA--AAGAACAA---ACAGAGTGCTG---------------------------------------------A..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
.................................................................................................................................................GCTGGCGAAAA----A--------AA--A-......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1580.38300000000003000000
....................................................................................................................................................................................................................................................................................T--CT-----------GT------A----T--GTGTGT---------------------------GTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.05100000000001000000
droSec2
T-------------CTGAGAT--AAATAACGCGCA-----------------------GCAAAAGCAACTATTTTTAGCGGATTACGTGAGTGTCATTTGAATTTT-------------TTCGGCGTGAAGTATACGCCCGATCTGCTGGCGAAAA----A--------AA--A-A---GAAAAGG-AA--AAGAACAA---ACAGAGTGCTG---------------------------------------------ACCAAATTTGCTCG-CCAT--CT-----------GT------A--------TATGT---------------------------GTGTCTAAGCCAAAGT-----------------G--------TGTGCGCGAGTGTG--------TTT--------GTGTGTGTGTGTATTTGT--------------------------------------GTGTTG--------------------GCCAGC----------------------TCCAAAACCT--GCTGCTATTATTAGCCTTAGCCAAGATTATGGGCGATTTCATTATGGCGCTGCAATTTGCTGTGCCGACGC-------------------------------------------------AAAAAGCGAAAC-----------AAAAATGTAAAA---C---AGCAGT--GTCCGGGCCA-----AGAAGATT--------T----GAGCCAAG-TTAGACG-AGTT------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................................................................................................................................................................AGT-----------------G--------TGTGCGCGAGTGTG--------TT..............................................................................................................................................................................................................................................................................................................................................................................................2011.0010001
.......................................................................................................TTT-------------TTCGGCGTGAAGTATACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
dm3
A----------AT-CTGAGAT--AAATAACGCGCA-----------------------GCAAAAGCAACTATTTTTAGCGGATTACGTGAGTGTCATTTGAATTTT-------------TTCGACGTGAAGTATACGCCCGATCTGTTGGCGAGAA----A--------AA-TA-A---GAAAAAG-AA--AAGAACAA---ACAGAGTGCTG---------------------------------------------GCCAAATTTGCTCG-CCAT--CT-----------GT------A----TGTGTCT-----------------------------GTGTCTAAGCCAAAGT-----------------G--------TGT--GCGAGTGT--------------------GTTTGTGTGTGTATTTGT--------------------------------------GTGTTG--------------------GCCAGC----------------------TCCAAAACCT--GCTGCTATTATTAGCCTTAGCCAAGATTATGGGCGATTTCATTATGGCGCTGCAATTTGCTGTGCCGCCGC-------------------------------------------------AAAAAGCGAAAC-----------AAAAATGTAAAA---C------AGT--GCCTGGGCCA-----AGAAGATT--------T----GAGCCGAG-TTAGACG-AGTT------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTATTTGT--------------------------------------GTGTTG--------------------GC.................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001020000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTATTTGT--------------------------------------GTGTTG--------------------G..................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000002000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTGTATTTGT--------------------------------------GTGTTG--------------------G..................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTGTATTTGT--------------------------------------GTGTTG--------------------GCC................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTATTTGT--------------------------------------GTGTTG--------------------GCCAGC----------------------.......................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................TAAGCCAAAGT-----------------G--------TGT--GCGAGT...........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATGGCGCTGCAATTTGCTG.............................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGATTATGGGCGATTTC...................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTGTATTTGT--------------------------------------GTGTTG--------------------...................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.............................................................................................................................................................................................................GAGTGCTG---------------------------------------------GCCAAATTTGCTCG-CC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTGTATTTGT--------------------------------------GTGTTG--------------------GC.................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................TGCTCG-CCAT--CT-----------GT------A----TGTGTCT-----------------------------GTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AGTGT--------------------GTTTGTGTGTGTAT.......................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................GCGAGTGT--------------------GTTTGTGTGT...........................................................................................................................................................................................................................................................................................................................................................................1850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................T--GCGAGTGT--------------------GTTTGTGTG............................................................................................................................................................................................................................................................................................................................................................................1860.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTGTATTTGT--------------------------------------GTGT.........................................................................................................................................................................................................................................................................................................................19110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
........................................................................................................................................................................................................................................................................................................................................................................................................GTGT--------------------GTTTGTGTGTGTAT.......................................................................................................................................................................................................................................................................................................................................................................18120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
A----------AT-CTGAGAA--AAATAACGCGCA-----------------------GCAAATTCAACTATTTTTAGCGGATTACGTGAGTGTCATTTGAATTT--------------TTCGGCGTGAAGTATACGCCCGATCTGCTGGCGAGAA----ATAGCCGAAGAAT----AA-------A--AA-AG----A---ACAGAGTGCTG---------------------------------------------GCCAAATTTGCTCA-CCATTTCT-----------GT------A--------TGTGTGTGTGTGTGAGTGTGTGGTGTGCGTGTGTGTCTAAGCCAAAGT-----------------------------------------------------------------GTGTGTATTTGT--------------------------------------GTGTTG--------------------TCCAAC----------------------TCCAAAACCT--GCTGCTATTATTAGCCTTAGCCAAGATTATGGGCGATTTCATTATGGCGATGCAATTTGCTGTGCCGCCGC-------------------------------------------------AAAAAGCGAAAC-----------AAAAATGTAAAA---C------AGA--GCTTAGGCCG-----AGAAGATT--------T----GAGCTGAG-TTAGACG-AGTT------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................................................................................................................................................TGTGTGTGTGTGAGTGTGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000100
droYak3
GCAAACGAAAAAT-CTGAGAA--AAATAACGCGCA-----------------------ACGAAATCAACTATTTTTAGCGGATTACGTGAGTGTCATTTGAATTTT-------------TTCGGCGTGAAGTATACGCCCGATCTGCTGGCGAGAA----TTAACCAACGAAT----AA-------A--AA-AGAACAA---ACAGAGTGTTG--------------------------------------------GGCCAAATTTGCTCA-CCAT--CTA----CG----GT----GT--GTGT--GTGTGT---------------------------GTGTCTAAGCCAAAGT-----------------G--------TGT--GCGAGTGTGT------------------GTTTGTGTGTATATTTGT--------------------------------------GTGTTG--------------------TCCAAC----------------------TTCAAAACCT--GCTGCTATTATTAGCCTTAGCCAAGATTATGGGCGATTTCATTATGGCGATGCAATTTGCTCTGCCGCCGC-------------------------------------------------AAAAAGCGAAAC-----------AAAAATGTAAAA---C------AGA--GCTTAGGCCG-----AGAAGATT--------T----GAGCTGAG-TTAGACG-AGTT------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................CAACTATTTTTAGCGGATTACGTGAGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
........................AATAACGCGCA-----------------------ACGAAATCAACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
......................................................................ATTTTTAGCGGATTACGTGAGTGTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
...........................AACGCGCA-----------------------ACGAAATCAACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
droEug1
A----------A----------------------------------------------------TCAACTATTTTTAGCGGATTACGTGAGTGTCATTTGAATTTT-------------TTCGGCGTGAAGTAAACGCCTAACCCGCTGGCGAGAA----A--------AAAT----AA-------A--AC-AGAACAA---ACAGAGTGCTG---------------------------------------------GCCAAATTTGCTCA-CCAT--CT-----------GT------A----T--ATCT-----------------------------GTGTCTAAGCCAGAGT-----------------T--------TGT-CGT---TGTG--------TCTATGTGTGTGTGTG--------TGTGT--------------------------------------GTGTTG--------------------GCCAGC----------------------TCCAAAACCT--GCTGCTATTATTAGCCTTAGCCAAGATTATGGGCGATTTCATTATGGCGCTGCAATTTGCTGTGCCGCCGC-------------------------------------------------AAAAA---TACC-----------AAAAA---AAAACAATATAAGCAAA--GTTTAGGCCG-----AGAAGATT--------T----GAGCTAAG-TTAGACG-AGTT------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
G---------------------------GCGCGCA-----------------------GTAAATTCAACTATTTTTAGCGGATTACGTGAGTGTCATTTGAATTTT-------------TTCGGCGTGAAGTTTACGCCCGATCTGCTGGCCAGCG--------------GGA----AA-------A--AC-AG----A---ACAGAGTGCTG---------------------------------------------GCCAAAATTGCTCA-CCAT--CT-----------GT------A--------TCT-----------------------------GTGTCTAAGGCAG--T-----------------G------------------TG--T--------------GCTTGTGTG--------TGTGT--------------------------------------GTGTTG--------------------GCCAGC----------------------TCCAAAACCT--GCTGCTATTATTAGCCTTAGCCAAGATTATGGGCGATTTCATTATGGCGCTGCAATTTGCTGAGCCGCCGC-------------------------------------------------ACAA------AC-----------AAAAATA--AAAAAACTGAAACCGA--GCTTAGGCCG-----AGAAGATT--------T----GAGCTTAG-TTAGACG-AGTT------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
C----------A-----------AAAAAACGCGCA-----------------------GCAAATTCAACTATTTTTAGCGGATTACGTGAGTGTCATTTGAATTTT-------------TTCGGCGTGAAGTATACGCCCGATCTGCTGGGCAGAA----A--------AA--AATGGA-------A--AC-AG----A---ACGGAGTGCTG---------------------------------------------GCCAAATTTGCTCA-CCAT--CT-----------GT------A--------TCT-----------------------------GTGTCTAAGCTAA-GT-----------------G--------------------------------------TGTGTTTG--------TGTGT--------------------------------------GTGTTG--------------------GCCAGC----------------------TCCAAAACCT--GCTGCTATTATTAGCCTTAGCCAAGATTATGGGCGATTTCATTATGGCGCTGCAATTTGCTGTGCCGCCGC-------------------------------------------------AAAAA---AACC-----------AAAAAAGAAAAA---C------CGA--GCTTAGGCCG-----AGAAGATT--------T----GAGCTTAG-TTAGACG-AGTT------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
C----------AA----------ACAAAACGCGTA-----------------------GCAAATTCAACTATTTTTAGCGGATTACGTGAGTGTCATTTGAATTTT-------------TTCGGCGTGAAGTATACGCCCGATCTGCTGGCGAGAA----A--------AA--A------------A--AT-AG----A---ACAGAGTTCCG---------------------------------------------TCCAAATTTGCTCA-CCAT--CT-----------GT------A--------TCT-----------------------------GTGTCTAAGCCAGAGTTTT--CTATATGTA----------------TGTGTGTG--TGTTCGAGTGA----GTGTGTTGG--------TGTGT--------------------------------------GTGTTG--------------------GCCAGC----------------------TCCAAAACCT--GCTGCTATTATTAGCCTTAGCCAAGATTATGGGCGATTTCATTATGGCGCTGCAATTTGCTGAGCCGCCGC-------------------------------------------------AAAAA-----AC-----------AAAA-----AAA---C------CAATGGTTTGGGCCG-----AGAAGATT--------T----GAGCTTAG-TTAGACG-AGTT------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
A----------C----GAAAACACAAAAACGGGCA-----------------------GCAAATTCAAC-ATTTTTAGCGGATTACGTGAGTGTCATTTGAATTTT-------------TTCGGCGTGAAGTATACGCCCGATCTGCTGGCGAGAA----A--------GA--AA---A-------A--AT-AG----A---ACAGAGTGCTG---------------------------------------------GCCAAAATTGCTCA-CCAT--CT-----------GT------A--------TCT-----------------------------GTGTCTAAGCCAGAGCTTTGCCTGTGTGT------------------GCGAGTGTGTGTGCC----------AGTGTGTG--------TGTGT--------------------------------------GTGTTG--------------------GCCAGC----------------------TCCAAAACCT--GCTGCTATTATTAGCCTTAGCCAAGATTATGGTCCATTTCATTATGGCGCTGCAATTTGCTGAGCCGCCGC-------------------------------------------------AGAAA---A-ACACAAAAACGCCAAA----AAAAA---T------AGA--GTTTGGGCCG-----AGAAGATT--------T----GAGCTTAG-TTAGACG-AGTT------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
A----------C-----------AAAAAACGCGCA-----------------------GTAAATTCAACTATTTTTAGCGGATTACGTGAGTGTCATTTGAATTTT-------------TTCGGCGTGAAGTAAACGCCCGACTTG--------AA----A--------AA--AA---A-------AAC--AAGAACAA---ACAGAGTGCTG---------------------------------------------GCCAAATTTGCTCA-CCAT--CT-----------GT------A--------TCT-----------------------------GTGTCTAAGCCAGAGT-----------------T--------TTGTCGTGTGTG--T--------------GTGTGTGTG--------TGTGT--------------------------------------GTGTTG--------------------GCCAGC----------------------TCCAAAACCT--GCTGCTATTATTAGCCTTAGCCAAGATTATGGGCGATTTCATTATGGCGCTGCAATTTGCTGTTCCGCCGC-------------------------------------------------AAAAAAAAAAAT-----------ACAAAAAAAAAA---C------TAA--CTTTAGGCCG-----AGAAGATT--------T----GAGCTAAG-TTAGACG-AGTT------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
A-----------------------AAAAGCGCGCA-----------------------GTAAATTCAACTATTTTTAGCGGATTACGTGAGTGTCATTTGAATTTT-------------TTCGGCGTGAAGTATACGCCCGATCGGCTGGCGAGAA----A--------AA--A---------------AC-AGAACAAACAACGGAGTGTTG---------------------------------------------GCCAAATTTGCTAA-CCAT--CT-----------GT------AAATGT--ATCT-----------------------------GTGTCTAAGCCAGAGT-----------------C--------TGTATCCGAG----------------------TGTGTG--------TGTGT--------------------------------------GTGTTG--------------------GCCAGC----------------------TCCAAAACCT--GCTGCTATTATTAGCCTTAGCCAAGATTATGGGCGATTTCATTATGGCGCTGCAATTTGCTGTGCCGCCGC---------------------------------------------------------------------------------------C------AGA--GTTTGGGCCG-----AGAAGATT--------T----GAGCTTAG-TTAGACG-AGTT------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
A----------AC-C--------AACAATCGCGCA-----------------------GTAAATTCAACTATTTTTAGCGGATTACGTGAGTGTCATTTGAATTTT-------------TTCGGCATGAAGTATACGCCCGATCTGTAAGCGAGAA----A--------AA--A---------------AA-AGAACAA---ACAGAGTATTG---------------------------------------------GCCAAATTTGTTAG-CCAT--CT-----------GT----GC--TAGT--ATCTGT---------------------------GTGTCTAAGCCAGAGT-----------------G--------TACTTAAGAGTGTG--------TGT--------GCTTGTGTGTGTGTGTGT--------------------------------------GTGTGG--------------------G---------------------------TCCAAAACCT--GCTGCTATTATTAGCCTTAGCCAAGATTATGGGCGATTTCATTATGGCGCTGCAATTTGCTGGGCAGCC-------------------------------------------------------------------------------------------------------------CGAAAACAGAAGATT--------TTTGCGAGCTTAGCTTAGACG-GGTT------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................AAATTCAACTATTTTTAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
droBip1
T----------T----AAAAAAAAACAAGCGCGCA-----------------------GTAAATTAAACTATTTTTAGCGGATTACGTGAGTGTCATTTGAATTTT-------------TTCGGCGTCAAGTATACGCCCGATCTGTAGGCAAGAA----A--------AA--A------------------AGAAAAA---TATGAGTATTG---------------------------------------------GGCAAATTTGTTAG-CCAT--CT-----------GT----GA--GAGT--TTCTGT---------------------------TTGTCTAAGCCAGAGT-----------------G--------TAT--CTAAGAG--------------------TGTTTG----------TGT--------------------------------------GTGTG-------------------------GG----------------------TCCAAAACCT--GCTGCTATTATTAGTCTTAGCCAAGATTATGGGCGATTTCATTATAGCGCTGCAATTTGCTGGGCAGCCCG-------------------------------------------------AAAA-------------------------------------------------------C-----AGAAGATT--------TTTGCCAGCATTGCTTAGACG-GGTT------------------------SizeHit CountTotal NormTotal
No Reads
dp5
-----------------------------CGCGCA-----------------------ATAAATTCCACTATTTTTAGCATATTACGTGAGTGTCATTTGAATTTG-------------TT--GCGTGAAGTGTAGCCCCGGTCCGGGGGCAA--------------------------------------AAGAACAA---ACAGAGTTATA---------------------------------------------CCCAAATTTGTTCA-CCAT--TTGGCTA-ACTCTGTGCCTGC--TTGT--CTCT------------------------------------------------------GTGTATGTG----------------------T------------------GTCTCTGTGTGCGAGTGT--------------------------------------CTGTTG--------------------GCCAGC----------------------TCCAAAACCT--GCTGCTATTATTAGCCTTAGCCAAGATTATGGGCGATTTCATTATGGCGCTGCAATTTGCTGTGCTGCCGCCAGCCCCAGTCCCAGCCCCAGCTCCAGCCCCAGCTCCAGTCCCAGTCCCAGAA-----------------------------------------AGA--GTTTGGGCCG-----AGAAGATTTTAGAGTTT----GAGTTTGG-TTAGACG-AGTT------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................................A-CCAT--TTGGCTA-ACTCTGTGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001000000
droPer2
-----------------------------CGCGCA-----------------------ATAAATTCCACTATTTTTAGCATATTACGTGAGTGTCATTTGAATTTG-------------TT--GCGTGAAGTGTAGCCCCGGTCCGGGGGCAA--------------------------------------AAGAACAA---ACAGAGTTATA---------------------------------------------CCCAAATTTGTTCA-CCAT--TTGGCTA-ACTCTGTGGCTGC--TTGT--CTCT------------------------------------------------------GTGTGTGTGTGTCTCTGTGT--GTG--TG----------TGT--------GTGTGTGTGTGCGAGTGT--------------------------------------CTGTTG--------------------GCCAGC----------------------TCCAAAACCT--GCTGCTATTATTAGCCTTAGCCAAGATTATGGGCGATTTCATTATGGCGCTGCAATTTGCTGTGCTGCCGCCAGTCCCAGTCCCAGTCCCAGCCCCAGCTCCAGCTCC------AGTCCCAGAA-----------------------------------------AGA--GTTTGGGCCG-----AGAAGATTTTAGAGTTT----GAGTTTGG-TTAGACG-AGTT------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTGTGCGAGTGT--------------------------------------CC...........................................................................................................................................................................................................................................................................................................................19170.122000002
..................................................................................................................................................................................................................................................................................................................................................................................GTGTGTGTCTCTGTGT--GTG--T...........................................................................................................................................................................................................................................................................................................................................................................................................20200.102000002
droWil2
A----------AA-C---------GAAAAA----------------------------------------------------------------------------------------------------------------------GGAGAGAA----A--------AA--A---------------AT-------------------------------------------------------TGTTTCTAACAAGCAAAAATTGCTAAGCCCT--TTGGCTATAATGTGCATGTGT--TTGA--CTCT------------------------------------------------------GTGTGTGTG----------TGTGCGAA----------------------TGTGTG--------TGTGTGTGTTGGCGTCTTGATGTATTGGTGTGCTGTTGTATATGTGTTG--------------------GC---------------------------CGAAAACCT--GCTGCTATTATTAGCCTAAGCCAAGA-------------GATTATAAGGCTGCAATTTGCTGAAA----AC-------------------------------------------------AACAACAACAAC-----------AAAAATA----A---C------AAC--GAAAAAGCAG-----ACAAGTTT--------T----GCCC-----------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................................................................................................................................................................................................................................................................................................................................GTGCGAA----------------------TGTGTG--------TGTGTGTGTTG.............................................................................................................................................................................................................................................................................................................................................................2411.00100001
................................................................................................................................................................................................................................................................................................................................................................................GTGTGTG----------TGTGCGAA----------------------TGTGTG--------TGTGTGT.................................................................................................................................................................................................................................................................................................................................................................2830.33100100
.........................AAAAA----------------------------------------------------------------------------------------------------------------------GGAGAGAA----A--------AA--A---------------A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18160.06100010
................................................................................................................................................................................................................................................................................................................GA--CTCT------------------------------------------------------GTGTGTGTG----------TGT.................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100100
droVir3
A----------AACTTGAAAA---AAAAAAACACA----------TTTATATATACATATATATTCAACTATTTTTAGCGTATTACGTGAGTGTCATACGAATTTGGGCAGTTGAGCTTTTGAGC---------------GAG----TGTCGAGCGAAAAA--------A----------------------AAAACAA---AAAATGTGTTAAATAGCGTACACTGTAC---------AGCAAA-TGCTTCTAACAAGC-------GCT-G-CCCT--TT-----------GT----GG--GCG----TCT-----------------------------GT-----------------------GTGTGTGTG----------T--GTG--TG----------TGT--------GTGTGTGTGTGTGTATGT--------------------------------------CTGTAG--GCGCATAACTTAGCTTGAGCCAAG----------------------CCAAAAACCT--GCTGCTATTATTAGCCTTAGCCAAGATTATGGCCGATTTG------------------GC----------------------------------------------------------------------------------------------------------------------TG-----AAAAAA--------------------------AAATG-AGTT------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTGTGTATGT--------------------------------------CTGT.........................................................................................................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
A----------AC-TCGAAAA--AAAAAGTGAGCAGGCAGCAGCA-------ATAC--GTATATTCAACTATTTTTAGCGCATTACGTGAGTGTCATACGAATTTG-------------GCAGC--------------------TGAGCGCAAGCA----A--------CA--A---------------AA-AAAGCAAACACAAATGTGCTAAATAGTGTACACTGTACTACAGGCCCAACAAAGTCTTTCTAACAAGC-------GCT-G-CCCT--TT-----------GG------C--------TAT------------------------------------------------------GTGTGTGTG----------T------GTG--T--------------GTGTGTGTG--------TGTGT--------------------------------------GTGTTGAGGCGCATAACTCAGCTTGAGCCAAGCCAAAAAAAAAAAAAAACAAAATACAAAACCT--GCTGCTATTATTAGCTTAAGCCAAGATTATGGCCGATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................................................................................................................................................................................................................................................................TGTGTGTG----------T------GTG--T--------------GTGTGTGTG--------TGT.....................................................................................................................................................................................................................................................................................................................................................................25200.051000010
droGri2
C----------GT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT------GTG------TGT-----------------------------GTGTGTGTGCGTGTGT-----------------GTGTG----TGTGTGTGTGTG--T--------------GTTTGTGTG--------TGTGT----------------GTGTTTGT--------------GTGT-G--------------------CCAAGT----------------------TCTGGATTCTTTATCGCTCGTCTCATCCTCATCCAATG----GGGCAATGATGTTGCTTGGTTGCATGTCGCC----------------------------------------------------------------------------------------------------------------------------------------------------C-------AA--GAGGTCCTGGATAAAAAAGAGATGTAAAACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGT----------------GTGTTTGT--------------GTGT-G--------------------CCA................................................................................................................................................................................................................................................................................................2150.20101
....................................................................................................................................................................................................................................................................................................................................................................................................................................G--------TGTGT----------------GTGTTTGT--------------GTGT-G--------------------CCA................................................................................................................................................................................................................................................................................................2250.20101
...................................................................................................................................................................................................................................................................................................................................................................................................................................TG--------TGTGT----------------GTGTTTGT--------------GTGT-G--------------------CC.................................................................................................................................................................................................................................................................................................22130.08101
....................................................................................................................................................................................................................................................................................................................................................................................................................................G--------TGTGT----------------GTGTTTGT--------------GTGT-G--------------------CC.................................................................................................................................................................................................................................................................................................21140.07101

Generated: 05/17/2015 at 06:54 PM