ID:

dsi_22644

 Coordinate:

3r:16796401-16796550 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.4 -14.3

Flybase annnotation

exon [3r_16796551_16796632_-]; five_prime_UTR [3r_16796551_16796632_-]; intron [3r_16796223_16796550_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTGCACTTTTGTCGGCATTTCTTAACTGCATATTTTCTCACTTTTAAAAGGTAAGTACGCACGAAATTCCTTGCTTATTATGTTTTCCAGTTAAAACACGAATACCCGGTGGGTTTTTGTTTATTTTGCGATTGACTAACCACGTAGTTCTTAAACATTCACATATCCCGTGGGCTCTGCCAGTTCTTCACGTTTTCGGGCTCCATATTAGCCATAGTTTTGTTTTCTATATTCTTTTGGTAAAACGCCG
***************************************************************************************************.....((((..((((...((((((..(((((..((......)))))))....)))))).......))))..))))........******************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body		 SRR618934
dsim w501 ovaries
 M053
female body
 O001
Testis
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 O002
Head
 GSM343915
embryo
..........GTCGGCATTTCTTAACTG.............................................................................................................................................................................................................................. 18 0 1 48.00 48 46 2 0 0 0 0 0 0 0
..........GTCGGCATTTCTTAACTGC............................................................................................................................................................................................................................. 19 0 1 12.00 12 10 1 0 0 0 0 0 1 0
..GCACTTTTGTCGGCATTTCTTAACT............................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0
..........GTCGGCATTTCTTAACTGG............................................................................................................................................................................................................................. 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.........TGTCGGCATTTCTTAACTGCATATT........................................................................................................................................................................................................................ 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.TGCACTTTTGTCGGCATTTCT.................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0
.........................................TTTTAAAAGGTAAGTACG............................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0
...................................................................................................GAATACCCGGTGGGTTTTTG................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.............................................AAAAGGTAAGTACGCACGAA......................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0
TTGCACTTTTGTCGGCATTTC..................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0
.TGCACTTTTGTCGGCATTTC..................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0
....ACTTTTGTCGGCATTTCTTAA................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................CATATCCCGTGGGCTCTGCCA.................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
....ACTTTTGTCGGCATTTCTTAACTGC............................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................CACATATCCCGTGGGCTCTGC...................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..GCACTTTTGTCGGCATTTCTTAACTGC............................................................................................................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................ATCTTCCGTGGGCTCTGCAAG................................................................... 21 3 2 0.50 1 0 0 0 0 0 0 1 0 0
.....................................................................................................................................................................................................................GTGGTTTTGTTTTTTATATTCTTTTG........... 26 3 3 0.33 1 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................ATCCCGTCGGCTCCGCCA.................................................................... 18 2 3 0.33 1 0 0 0 0 0 0 1 0 0
..................................................................................................................................................................ATCTTCCGTGGGCTCTGC...................................................................... 18 2 3 0.33 1 0 0 0 0 0 0 1 0 0
.................................TTTCTCACTTTTAAAAGCTG..................................................................................................................................................................................................... 20 2 3 0.33 1 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................TCCCGTGGGCTCTGCTAGGC................................................................. 20 3 4 0.25 1 1 0 0 0 0 0 0 0 0
..........GTCGGCATTTCTTAGGTGCC............................................................................................................................................................................................................................ 20 3 5 0.20 1 0 0 0 0 0 0 0 0 1
..................................................................................................................................................................ATCTGCCGTGGGCTCTG....................................................................... 17 2 14 0.07 1 0 0 1 0 0 0 0 0 0
................................................................................................................GTTTTTGATTTTTTTGAGATTG.................................................................................................................... 22 3 14 0.07 1 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................GGTCTCTGCCAGGTCT............................................................... 16 2 20 0.05 1 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

AACGTGAAAACAGCCGTAAAGAATTGACGTATAAAAGAGTGAAAATTTTCCATTCATGCGTGCTTTAAGGAACGAATAATACAAAAGGTCAATTTTGTGCTTATGGGCCACCCAAAAACAAATAAAACGCTAACTGATTGGTGCATCAAGAATTTGTAAGTGTATAGGGCACCCGAGACGGTCAAGAAGTGCAAAAGCCCGAGGTATAATCGGTATCAAAACAAAAGATATAAGAAAACCATTTTGCGGC
********************************************************************.....((((..((((...((((((..(((((..((......)))))))....)))))).......))))..))))........*************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 SRR553488
RT_0-2 hours eggs
 M023
head
 SRR618934
dsim w501 ovaries
...................................................ATTCATGCGTGCTTTAAGGAA.................................................................................................................................................................................. 21 0 1 2.00 2 2 0 0 0 0 0
..............................................................................................................................................................................AATACGGTCAAGAAGTGCAAAAGC.................................................... 24 2 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................................................................TACCCGAGACGGTCAAGAAGT............................................................ 21 1 1 1.00 1 1 0 0 0 0 0
...................................................TTTCATGCGTGCTTTAAGGA................................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
...............................................TTCCATTCATGCGTGCTTTAA...................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
.....................................................TCATGCGTGCTTTAAGGAAC................................................................................................................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0
...............................................................................................................................................................................AGACGGTCAAGAAGTGCAAAA...................................................... 21 0 1 1.00 1 1 0 0 0 0 0
.......................................................ATGCGTGCTTTAAGGAATGAT.............................................................................................................................................................................. 21 2 1 1.00 1 1 0 0 0 0 0
........................................................................................................................................................TTTGAAAGGGTATAGGACACC............................................................................. 21 3 4 0.75 3 0 3 0 0 0 0
..............................................................................................................................................................................................GCAAAAGTCCGAGGTA............................................ 16 1 3 0.33 1 0 1 0 0 0 0
.........................................................................................................................................................TTGAAAGGGTATAGGACACC............................................................................. 20 3 10 0.10 1 0 1 0 0 0 0
......................................................................................................................................................AATTTGTAAGTGAATAAGGTA............................................................................... 21 3 15 0.07 1 1 0 0 0 0 0
...........................................................................................................................................................................................AGTGCCAAATCCCGAG............................................... 16 2 17 0.06 1 0 0 0 1 0 0
......................................................................................GGTTAATTTTGTACTTATG................................................................................................................................................. 19 2 19 0.05 1 0 1 0 0 0 0
..........................................................................................................................................................................CCCGGGGACGGTCAAGAAG............................................................. 19 3 20 0.05 1 0 0 0 0 1 0
............................................................................................................................................................................CTGAGACGGTCAAGAGG............................................................. 17 2 20 0.05 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:16796351-16796600 - dsi_22644 TTGCACT--TTTGTCGGCA---TTTCT-TA-------AC------TGCATAT-TTTCTCACTTTTAAAAGGTAAGTACGCACGAAATTCCTTGCTTATTAT----GTTTTCCAGTT-AAAACACGAA--TACCCGGTGGGT-TTTTG----------------------------TTTATTTT----------------------------GCGATTGACTAACC---ACGTAGTTCT-TAAACATTCA----CAT-AT-CCCG-TGGGC-----------------------TCTGCCAGTTC-------------------TT----------------------------CACGTTTTCGGGCTCCATATTAGCCATAGTT-TTG-TTTT---C--TA--TATTCTT-TTGGTAA----------------------------------------AACGCCG
droSec2 scaffold_0:17659000-17659249 - TTGCACT--TTTGTCGGCA---TTTCT-TA-------AC------TGCATAT-TTTTTCACTTTTAAAAGGTAAGTACGCACGAAATTCCTTACTAATTAT----GTTTTCCAGTT-AAAACACGAA--TACCCGGTGGGT-TTTTG----------------------------TTTGTTTT----------------------------GCGATTGACTAACC---TCGTAGTTTT-TAAACATTCA----CTT-AT-TCCA-TGGGA-----------------------TCTGCCAGTTC-------------------TT----------------------------CACGTTTTCGGGCTCCATATTAGCCATAGTT-TTG-TTTT---C--TA--TATTCTT-TTGGTAA----------------------------------------AACGCCG
dm3 chr3R:4170156-4170405 + TTGCACT--TTTGTCGGCA---TTTCT-TA-------AC------TGCATAT-TTTCTCACTTTTTAAAGGTAAGTACGCACGAAATTACTTATTGATTAT----CTTTTCCACTT-AAAACACGAA--TGCCCGGTGGGT-TTTTG----------------------------TTTGTTTT----------------------------GCGATTGACTAACC---ACGTAGTTCT-TAAACATTCA----CAT-TT-TCCT-TGGGC-----------------------TCTGCCAGTTC-------------------TT----------------------------CACGTTTTCGGGCTCCATTTTAGCCATAGTT-TTG-TTTT---C--TA--TATTCTT-GTGGTAA----------------------------------------AACGCCG
droEre2 scaffold_4770:17399734-17399969 - ----ACA--TTTGTCGGCA---TTTCT-TA-------AT------TGCATAT-TTTCTCACTTTTAAAAGGTAAGTCCGCACGATATTCATTATTAATTAT----ATTTTCCCGTT-GAAACACGAA--TTCCTGA----T-TTTTG----------------------------TTTGCTTT----------------------------GCAATTGACTAACC---ATGTAATTCC-CGAACATTCA----CAT-TT-TCT-----GA-----------------------TCTGACGGTTC-------------------TT----------------------------CACGTTTTCGGTCTCCATTTTAGCCATAGTT-TTG-TTTT---C--TA--TATTCTT-AAG--AC----------------------------------------AATGCCG
droYak3 3R:8247471-8247721 + TTGCACT--TTTGTCGGCA---TTTCT-TA-------AC------TGCATAT-TTTCTCACTTTTAAAAGGTAAGAACGCACGAAATTCATTATTGATTAT----GTTTTCCCGTT-GAAACACGAC--TGCCTGACGGGTTTTTTG----------------------------TTTGCTTT----------------------------GCGATTGACTAACC---ATGTAGTTCT-CAAGCAATTA----CAT-TT-TCCG-TGGTA-----------------------TATGACGGTCC-------------------TT----------------------------TACGTTTTCGGGCTCCATCTCAGCCATAGTT-TTG-TTTT---C--TA--TATTCTT-TTGGTAA----------------------------------------AACGCCG
droEug1 scf7180000409490:548699-548945 - TTGCAAT--TTTGTCGGCA---TTTTT-T--------AT------TGCATTT-TTTCTCACTTTTAAAAGGTAAGTAAGCACGAAATGCAAATTTAAATAT----CTTTTCCCGAT-AAAACACCAT--TGCCTGACAGGG-TTTTG----------------------------TTTGCTTT----------------------------T-GAATGACTAACC----CGTT-TTTT-CAAACATTCA----CAT-TTTTCTG-TGTAA-----------------------TCTGATAGTTC-------------------TT----------------------------CACGTTTTTGGGCTCCATTTAAGCCATAGTT-TTG-TTTT---G--TA--GATTCTT-TTGGTAA----------------------------------------AACGTCG
droBia1 scf7180000302402:6864744-6864994 + TTGCAAT--TTTGTCGGCA---TTTTC-TTT------AT------TGCAT-T-TTTCTCACT-TTAAAAGGTAAGTAAGCACGAAATTGTATTTTTACTAC----GTCCACCAGAT-AAAACTGGAT--TGCCTGACGGGT-TTTTG----------------------------TTTGTTCT----------------------------GCG-CTGACTAACC---ACGTAGTTCTTGAGACATCCA----CAT-TTTTCCG-TGTGG-----------------------TCTGAAAGTTC-------------------CC----------------------------CACATTTTCGGGCTCCATTTTGGCCACAGTT-TTG-TTTT---C--TT--TATTCTT-TTGGTTA--------------------------------------A-AATCCCG
droTak1 scf7180000415750:92885-93139 + TTGCAATTTTTTGTCGGCA---TTTTC-T--------AC------TGCAT-T-TTTCTCACCTTTAAAAGGTAAGTAAGCACGAAATAATATTTTAACTAT----GTTTACCCGAT-AAAACACGAT--TGCCTGACGGGT-TTTTG----------------------------TTTGTTCT----------------------------GCGACTGACTAACC---ACGTAGTTTTCCAAGCATTCA----CAT-TTTTCGG-TGTGA-----------------------TCCGAAAGCTT-------------------TT----------------------------CACGTTTTCGGGCTCCATTTTAGCCACAGTTTTTGTTTTT---C--TA--TATTCTT-CTGGCAA--------------------------------------A-AACCCCG
droEle1 scf7180000491212:1652942-1653199 - TTGCAAT--TTTGTCGGCA---TTTTT-TT-------AC------TGCAT-T-TTTCTTACTTTCAAAAGGTACGTAAGCACGAAATTCCAACTAAACTATGTATTTTTACCTGAT-TTAACACTTT--TGCCGGAGAGGT-TTTCG----------------------------TTTGTTCT----------------------------GCAATTGTCTAACC---ATGTAGATTTATAATCACTCA----CAT-TTTCCCA-AGTGA-----------------------GCAGCTAGTT--------------------TT----------------------------CACGTTTTCGGGCTTCATTTTAGCCATAGATTTTGGTTTT---C--CA--TATTCTC-TTGGCAA--------------------------------------AAAACCCCG
droRho1 scf7180000779995:148902-149152 + TTGCAAT--TTTGTCGGCA---TTTTT-TT-------AC------TGCAT-T-TTTCTTACTTTCAAAAGGTACGTAAGCACGAAATTATATTTAAAT--T----GTTTTCCTAAT-AAAACACGAT--TGCCTGACAGGGTTTTTG----------------------------TTTGTTTT----------------------------TCAATTGTCTAACC---ACGTACTTTT-TAATCACTCA----CAT-GTTTCCG-AGTGA-----------------------TCAGCAAGTTT-------------------TC----------------------------AACGTTTACGGGTTTCATTATAGCCATAGTTTTTGATTTC---C--CA--TATTCTC-TTGGTAA----------------------------------------AACCCCG
droFic1 scf7180000454073:3277055-3277305 - TTGCAAT--TTTGTCGGCA---TTTTC--C-------AC------TGCAT-T-TTTCTTACTTTTAAAAGGTACGTAAGCACGAAATTGCATTTTTAATAC----TTTTACCCGAAAAAAACACGAT--TGCCTGACGGGG-TTTTG----------------------------TTTGCTTT----------------------------GCTGTTGACTAACC---ACTTAGTTTTTCAAACCCCCA----TAC-AT-TCCGTTTGGA-----------------------TCTGTCAGTTG-------------------TT----------------------------CACGTTTTGGAACTCCATTTTAGCCAGAGTA-TTG-TTTT---C--TA--CATTATT-TCGGCAA----------------------------------------AATTTCG
droKik1 scf7180000302810:849700-849966 - TTGCAAAAATCTGTCGGCGGAATCCTT-TT-------AT------TTCTTCA-GTTC-TTCTTTTCCGAGGTACGTAAGGACGGAGCTCGACCTGGTAGGT----GTTTCGGACCC-CAAAA--GCTAGTC---GACGAAG-T--GT----------------------------TTTGTTTT----------------------------GCGATAGACTAACCAGCACGTTGTTGT-TCAGCATCCATCAACCT-TGCTCCG-TGTGAGCAGGGGCTTCCTGCCTT-----------------------------------GT----------------------------CATCCATGCGGTGTCCATTTTAGCCG--GCT-CTG-ATTTAAACTACA--TATTTTTGTTGGT-T----------------------------------------TACGCCC
droAna3 scaffold_13340:13271914-13272135 + TTGCAGT--TTTGCCGGAA---CTTTT-TT-------TA------AACATTT-TTCCTCACTTTTTAAAGGTACGTATGCATGCATTTTAAGCTTGATTAT----GTTTCCCAGCC-TA-ATAAATC--TGTTCGACGAAG-TTTAT----------------------------TTTACTTT----------------------------GCAATTGATTAACA---ACGTAGTTTC-AATGCATCCA----CAT-TTTTCCA---------------------------------------C-------------------TA----------------------------CACGTTCCTAGG---------------AGTC-TTG-CACT---C--CAATTATTCTT-TTGGTTA----------------------------------------TAACCCG
droBip1 scf7180000396691:2142717-2142940 + TTGCAGT--TTTGCCGGAA---TTTTATTT-------TA------AGCATTTTTTCCTCTCTTTTTAAAGGTACGTATGCATGAAAGTTAAGCTCAATTAT----GTTTTCTGGCC-TA-ATAAATT--GGTTCGACGAAG-TTTCT----------------------------TTTACTTT----------------------------GCTTTTGACTAACA---ATGTAGTTTC-AATGCATCCA----CAT-TTTTTCA---------------------------------------CAAGGCGTTC----------CTC---------------------------AGATTTTTCGCACTCCGTTTA--------------------------------TCTT-TTGGTTA----------------------------------------TAACCCG
dp5 2:14041798-14042111 - T---------TTGTCGGCA---TTTCA-TTTAGTTTTATTCAAATTTTAATT-TTTTAAACATTTACAAGGTTAGTACGCACGCAATTTGAGG--AATT---------------------------------TTGTTTGGT-TTTTGTTCTTTTTTGTTGGCTGAGAGCCTCTGTACTGCTTT----------------------------ACAATTGACTAACC---AAGTAGTTCC---GGCATTGAGTGACCTCCACTCCG-TGGAATCCATCCCATCCTCATTTTTCAT----------GCAGGAGCCCCCATTTGCTCCA----------------------------TATTTTTTCGGGCTCAATTTGTGG---------------------------ACATTT-TCGGTGTAGATGTACGTGAATACTGTTAAATAATACATGTGTATCAGGGCTCTG
droPer2 scaffold_0:6399760-6400072 + T---------TTGTCGGCA---TTTCA-TTTAGTTTTATTCAAATTTTAATT-TTTTAAACATTTACAAGGTTAGTACGCACGCAATTTGAGG--AATT---------------------------------TTGTTTGGT-TTTTGTTCTTTTTTGTTGGCTGAAAGCCTCAGTACTGCTTT----------------------------ACAATTGACTAACC---AAGTAGTTTC---GGCATTGAGTGACCTCCACTCCG-TGGTATCCATTCCATCCTCATTTTTCAT----------GCAGGAGCCC-CATTTGCTCCA----------------------------TATTTTTTCGGGCTCAATTTGTGG---------------------------AAATTT-TCGGTGTAGATGTACGTGAATACTGTTAAATAATACATGTGTATCAGGTCTCCG
droWil2 scf2_1100000004943:9081802-9082001 - TTAGAC----TTGTCGGCT---TTTTT-TT--GTTTTAT------TGCAT-T-TTTCTCA--TTCATACGGTACGTACAAT-----TTGGTTG--------------------------------------------------------------------------------------CTTTTAAAAACTATTAAAATCTTAATGAGTTTATTGTTGACTAATT----CGTAGTTG------CATCCC----CAT-TT-------GATA-----------------------ATTACCCCTAC-------------------TCCCCATTTTTGGGGAGAAATGTTTGTTTTTAAGTT--------------------------------TT-----------CTTCTT-T----------------------------------------------TTCTCCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTGCACT--TTTGTCGGCA---TTTCT-TA-------AC------TGCATAT-TTTCTCACTTTTAAAAGGTAAGTACGCACGAAATTCCTTGCTTATTAT----GTTTTCCAGTT-AAAACACGAA--TACCCGGTGGGT-TTTTG----------------------------TTTATTTT----------------------------GCGATTGACTAACC---ACGTAGTTCT-TAAACATTCA----CAT-AT-CCCG-TGGGC-----------------------TCTGCCAGTTC-------------------TT----------------------------CACGTTTTCGGGCTCCATATTAGCCATAGTT-TTG-TTTT---C--TA--TATTCTT-TTGGTAA----------------------------------------AACGCCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............GTCGGCA---TTTCT-TA-------AC------TG..................................................................................................................................................................................................................................................................................................................................................................................................................................18148.0048462000000000000000
............GTCGGCA---TTTCT-TA-------AC------TGC.................................................................................................................................................................................................................................................................................................................................................................................................................................19112.0012101000100000000000
..GCACT--TTTGTCGGCA---TTTCT-TA-------AC------T...................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
............GTCGGCA---TTTCT-TA-------AC------TGG.................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
...........TGTCGGCA---TTTCT-TA-------AC------TGCATAT-T...........................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
.TGCACT--TTTGTCGGCA---TTTCT-.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
.............................................................TTTTAAAAGGTAAGTACG..................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
............................................................................................................................GAA--TACCCGGTGGGT-TTTTG----------------------------..................................................................................................................................................................................................................................................................................................2011.00100000000001000000
.................................................................AAAAGGTAAGTACGCACGAA............................................................................................................................................................................................................................................................................................................................................................................................2011.00100001000000000000
TTGCACT--TTTGTCGGCA---TTTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
.TGCACT--TTTGTCGGCA---TTTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100001000000000000
....ACT--TTTGTCGGCA---TTTCT-TA-------A...........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
.............................................................................................................................................................................................................................................................CAT-AT-CCCG-TGGGC-----------------------TCTGCCA.....................................................................................................................................................................2111.00101000000000000000
....ACT--TTTGTCGGCA---TTTCT-TA-------AC------TGC.................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110000000000000000
.......................................................................................................................................................................................................................................................CA----CAT-AT-CCCG-TGGGC-----------------------TCTGC.......................................................................................................................................................................2111.00101000000000000000
..GCACT--TTTGTCGGCA---TTTCT-TA-------AC------TGC.................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
droSec2
TTGCACT--TTTGTCGGCA---TTTCT-TA-------AC------TGCATAT-TTTTTCACTTTTAAAAGGTAAGTACGCACGAAATTCCTTACTAATTAT----GTTTTCCAGTT-AAAACACGAA--TACCCGGTGGGT-TTTTG----------------------------TTTGTTTT----------------------------GCGATTGACTAACC---TCGTAGTTTT-TAAACATTCA----CTT-AT-TCCA-TGGGA-----------------------TCTGCCAGTTC-------------------TT----------------------------CACGTTTTCGGGCTCCATATTAGCCATAGTT-TTG-TTTT---C--TA--TATTCTT-TTGGTAA----------------------------------------AACGCCGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................GTAAGTACGCACGAAATTCCT......................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
dm3
TTGCACT--TTTGTCGGCA---TTTCT-TA-------AC------TGCATAT-TTTCTCACTTTTTAAAGGTAAGTACGCACGAAATTACTTATTGATTAT----CTTTTCCACTT-AAAACACGAA--TGCCCGGTGGGT-TTTTG----------------------------TTTGTTTT----------------------------GCGATTGACTAACC---ACGTAGTTCT-TAAACATTCA----CAT-TT-TCCT-TGGGC-----------------------TCTGCCAGTTC-------------------TT----------------------------CACGTTTTCGGGCTCCATTTTAGCCATAGTT-TTG-TTTT---C--TA--TATTCTT-GTGGTAA----------------------------------------AACGCCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................ACTTTTTAAAGGTAAGTA....................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000100000000000000100000000000000000000000000000000000000000000000
...........................................................ACTTTTTAAAGGTAAGTACGC.................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000100000000000001000000000000000000000
...........................................................ACTTTTTAAAGGTAAGTACG..................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000020000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................ACTTTTTAAAGGTAAGTACGCACGAAA...........................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000
....ACT--TTTGTCGGCA---TTTCT-TA-------AC------T...................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GTCGGCA---TTTCT-TA-------AC------TGC.................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
.....CT--TTTGTCGGCA---TTTCT-TA-------............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............TCGGCA---TTTCT-TA-------AC------TGCATAT-TTTC........................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....ACT--TTTGTCGGCA---TTTCT-.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................ACACGAA--TGCCCGGTGGG.....................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TGTCGGCA---TTTCT-TA-------AC------TGCATAT-TT..........................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TGCACT--TTTGTCGGCA---TTTCT-T....................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................CTTTTTAAAGGTAAGTACGC.................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
...............................................................................................................................................TTTG----------------------------TTTGTTTT----------------------------GCGATTG.......................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................................................................AT-TT-TCCT-TGGGC-----------------------TCTGCCAGTTC-------------------TT----------------------------CAC.............................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......T--TTTGTCGGCA---TTTCT-TA-------AC------TGC.................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....ACT--TTTGTCGGCA---TTTCT-TA-------AC------TG..................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
......T--TTTGTCGGCA---TTTCT-TA-------AC------TGCA................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................ACTTTTTAAAGGTAAGTACGCACGA.............................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
..GCACT--TTTGTCGGCA---TTTCT-TA-------AC------TG..................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
.........TTTGTCGGCA---TTTCT-TA-------AC------TGCAT...............................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................ACACGAA--TGCCCGGTGGGT-TTTTG----------------------------T.................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....ACT--TTTGTCGGCA---TTTCT-T....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.........................................................................................................CTTTTCCACTT-AAAACACGAA--TGCC............................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....ACT--TTTGTCGGCA---TTTCT-TA-------AC------TGCA................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................GTTC-------------------TT----------------------------CACGTTTTCGGGCTCC................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TTTTAAAGGTAAGTACGCACGA.............................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
......................................................................................................................................GGTGGGT-TTTTG----------------------------TTTGTTTT----------------------------GCG...........................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TTTCT-TA-------AC------TGCATAT-TTTCTCACTTT.................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...................................................T-TTTCTCACTTTTTAAAGGTA........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CACT--TTTGTCGGCA---TTTCT-TA-------AC------TG..................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..............................................................................................................................................TTTTG----------------------------TTTGTTTT----------------------------GCGATTG.......................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......T--TTTGTCGGCA---TTTCT-TA-------AC------TGCATAT-............................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................CTTTTTAAAGGTAAGTACGCACGA.............................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................CTTTTTAAAGGTAAGTACG..................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
........................TCT-TA-------AC------TGCATAT-TTTCTCACTTTTT...............................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................ACTTTTTAAAGGTAAGTAC...................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........TTTGTCGGCA---TTTCT-TA-------AC------....................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................GATTAT----CTTTTCCACTT-A...........................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TTTTTAAAGGTAAGTACG..................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................AAAGGTAAGTACGCACGA.............................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
................................................................TTAAAGGTAAGTACGCACG..............................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
................................................ATAT-TTTCTCACTTTTTAAAGGTAAGTA....................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTCT-TA-------AC------TGCATAT-TTTCTCACT...................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....ACT--TTTGTCGGCA---TTTCT-TA-------AC------TGCAT...............................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TTTTAAAGGTAAGTACGC.................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................ATAT-TTTCTCACTTTTTAAAGG..........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................CGGGCTCCATTTTAGCGC......................................................................................1890.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
----ACA--TTTGTCGGCA---TTTCT-TA-------AT------TGCATAT-TTTCTCACTTTTAAAAGGTAAGTCCGCACGATATTCATTATTAATTAT----ATTTTCCCGTT-GAAACACGAA--TTCCTGA----T-TTTTG----------------------------TTTGCTTT----------------------------GCAATTGACTAACC---ATGTAATTCC-CGAACATTCA----CAT-TT-TCT-----GA-----------------------TCTGACGGTTC-------------------TT----------------------------CACGTTTTCGGTCTCCATTTTAGCCATAGTT-TTG-TTTT---C--TA--TATTCTT-AAG--AC----------------------------------------AATGCCGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
TTGCACT--TTTGTCGGCA---TTTCT-TA-------AC------TGCATAT-TTTCTCACTTTTAAAAGGTAAGAACGCACGAAATTCATTATTGATTAT----GTTTTCCCGTT-GAAACACGAC--TGCCTGACGGGTTTTTTG----------------------------TTTGCTTT----------------------------GCGATTGACTAACC---ATGTAGTTCT-CAAGCAATTA----CAT-TT-TCCG-TGGTA-----------------------TATGACGGTCC-------------------TT----------------------------TACGTTTTCGGGCTCCATCTCAGCCATAGTT-TTG-TTTT---C--TA--TATTCTT-TTGGTAA----------------------------------------AACGCCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................................................TTGACTAACC---ATGTAGTTCT-CAAGCAAT..........................................................................................................................................................................................................................2812.00220000000000
....ACT--TTTGTCGGCA---TTTCT-TA-------AC------TGCATAT-............................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
......................................................TTCTCACTTTTAAAAGGTAAGAAC...................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000
.......................................................................................................................AACACGAC--TGCCTGACGG......................................................................................................................................................................................................................................................................................................................................1811.00110000000000
.......................................................................................................................................................................................................................................................................G-TGGTA-----------------------TATGACGGTCC-------------------T.............................................................................................................................................1811.00100000100000
.............TCGGCA---TTTCT-TA-------AC------TGCAT...............................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
droEug1
TTGCAAT--TTTGTCGGCA---TTTTT-T--------AT------TGCATTT-TTTCTCACTTTTAAAAGGTAAGTAAGCACGAAATGCAAATTTAAATAT----CTTTTCCCGAT-AAAACACCAT--TGCCTGACAGGG-TTTTG----------------------------TTTGCTTT----------------------------T-GAATGACTAACC----CGTT-TTTT-CAAACATTCA----CAT-TTTTCTG-TGTAA-----------------------TCTGATAGTTC-------------------TT----------------------------CACGTTTTTGGGCTCCATTTAAGCCATAGTT-TTG-TTTT---G--TA--GATTCTT-TTGGTAA----------------------------------------AACGTCGSizeHit CountTotal NormTotal
No Reads
droBia1
TTGCAAT--TTTGTCGGCA---TTTTC-TTT------AT------TGCAT-T-TTTCTCACT-TTAAAAGGTAAGTAAGCACGAAATTGTATTTTTACTAC----GTCCACCAGAT-AAAACTGGAT--TGCCTGACGGGT-TTTTG----------------------------TTTGTTCT----------------------------GCG-CTGACTAACC---ACGTAGTTCTTGAGACATCCA----CAT-TTTTCCG-TGTGG-----------------------TCTGAAAGTTC-------------------CC----------------------------CACATTTTCGGGCTCCATTTTGGCCACAGTT-TTG-TTTT---C--TT--TATTCTT-TTGGTTA--------------------------------------A-AATCCCGSizeHit CountTotal NormTotal
No Reads
droTak1
TTGCAATTTTTTGTCGGCA---TTTTC-T--------AC------TGCAT-T-TTTCTCACCTTTAAAAGGTAAGTAAGCACGAAATAATATTTTAACTAT----GTTTACCCGAT-AAAACACGAT--TGCCTGACGGGT-TTTTG----------------------------TTTGTTCT----------------------------GCGACTGACTAACC---ACGTAGTTTTCCAAGCATTCA----CAT-TTTTCGG-TGTGA-----------------------TCCGAAAGCTT-------------------TT----------------------------CACGTTTTCGGGCTCCATTTTAGCCACAGTTTTTGTTTTT---C--TA--TATTCTT-CTGGCAA--------------------------------------A-AACCCCGSizeHit CountTotal NormTotal
No Reads
droEle1
TTGCAAT--TTTGTCGGCA---TTTTT-TT-------AC------TGCAT-T-TTTCTTACTTTCAAAAGGTACGTAAGCACGAAATTCCAACTAAACTATGTATTTTTACCTGAT-TTAACACTTT--TGCCGGAGAGGT-TTTCG----------------------------TTTGTTCT----------------------------GCAATTGTCTAACC---ATGTAGATTTATAATCACTCA----CAT-TTTCCCA-AGTGA-----------------------GCAGCTAGTT--------------------TT----------------------------CACGTTTTCGGGCTTCATTTTAGCCATAGATTTTGGTTTT---C--CA--TATTCTC-TTGGCAA--------------------------------------AAAACCCCGSizeHit CountTotal NormTotal
No Reads
droRho1
TTGCAAT--TTTGTCGGCA---TTTTT-TT-------AC------TGCAT-T-TTTCTTACTTTCAAAAGGTACGTAAGCACGAAATTATATTTAAAT--T----GTTTTCCTAAT-AAAACACGAT--TGCCTGACAGGGTTTTTG----------------------------TTTGTTTT----------------------------TCAATTGTCTAACC---ACGTACTTTT-TAATCACTCA----CAT-GTTTCCG-AGTGA-----------------------TCAGCAAGTTT-------------------TC----------------------------AACGTTTACGGGTTTCATTATAGCCATAGTTTTTGATTTC---C--CA--TATTCTC-TTGGTAA----------------------------------------AACCCCGSizeHit CountTotal NormTotal
No Reads
droFic1
TTGCAAT--TTTGTCGGCA---TTTTC--C-------AC------TGCAT-T-TTTCTTACTTTTAAAAGGTACGTAAGCACGAAATTGCATTTTTAATAC----TTTTACCCGAAAAAAACACGAT--TGCCTGACGGGG-TTTTG----------------------------TTTGCTTT----------------------------GCTGTTGACTAACC---ACTTAGTTTTTCAAACCCCCA----TAC-AT-TCCGTTTGGA-----------------------TCTGTCAGTTG-------------------TT----------------------------CACGTTTTGGAACTCCATTTTAGCCAGAGTA-TTG-TTTT---C--TA--CATTATT-TCGGCAA----------------------------------------AATTTCGSizeHit CountTotal NormTotal
No Reads
droKik1
TTGCAAAAATCTGTCGGCGGAATCCTT-TT-------AT------TTCTTCA-GTTC-TTCTTTTCCGAGGTACGTAAGGACGGAGCTCGACCTGGTAGGT----GTTTCGGACCC-CAAAA--GCTAGTC---GACGAAG-T--GT----------------------------TTTGTTTT----------------------------GCGATAGACTAACCAGCACGTTGTTGT-TCAGCATCCATCAACCT-TGCTCCG-TGTGAGCAGGGGCTTCCTGCCTT-----------------------------------GT----------------------------CATCCATGCGGTGTCCATTTTAGCCG--GCT-CTG-ATTTAAACTACA--TATTTTTGTTGGT-T----------------------------------------TACGCCCSizeHit CountTotal NormTotal
No Reads
droAna3
TTGCAGT--TTTGCCGGAA---CTTTT-TT-------TA------AACATTT-TTCCTCACTTTTTAAAGGTACGTATGCATGCATTTTAAGCTTGATTAT----GTTTCCCAGCC-TA-ATAAATC--TGTTCGACGAAG-TTTAT----------------------------TTTACTTT----------------------------GCAATTGATTAACA---ACGTAGTTTC-AATGCATCCA----CAT-TTTTCCA---------------------------------------C-------------------TA----------------------------CACGTTCCTAGG---------------AGTC-TTG-CACT---C--CAATTATTCTT-TTGGTTA----------------------------------------TAACCCGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......T--TTTGCCGGAA---CTTTT-TT-------TA------AAC.................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000
droBip1
TTGCAGT--TTTGCCGGAA---TTTTATTT-------TA------AGCATTTTTTCCTCTCTTTTTAAAGGTACGTATGCATGAAAGTTAAGCTCAATTAT----GTTTTCTGGCC-TA-ATAAATT--GGTTCGACGAAG-TTTCT----------------------------TTTACTTT----------------------------GCTTTTGACTAACA---ATGTAGTTTC-AATGCATCCA----CAT-TTTTTCA---------------------------------------CAAGGCGTTC----------CTC---------------------------AGATTTTTCGCACTCCGTTTA--------------------------------TCTT-TTGGTTA----------------------------------------TAACCCGSizeHit CountTotal NormTotal
No Reads
dp5
T---------TTGTCGGCA---TTTCA-TTTAGTTTTATTCAAATTTTAATT-TTTTAAACATTTACAAGGTTAGTACGCACGCAATTTGAGG--AATT---------------------------------TTGTTTGGT-TTTTGTTCTTTTTTGTTGGCTGAGAGCCTCTGTACTGCTTT----------------------------ACAATTGACTAACC---AAGTAGTTCC---GGCATTGAGTGACCTCCACTCCG-TGGAATCCATCCCATCCTCATTTTTCAT----------GCAGGAGCCCCCATTTGCTCCA----------------------------TATTTTTTCGGGCTCAATTTGTGG---------------------------ACATTT-TCGGTGTAGATGTACGTGAATACTGTTAAATAATACATGTGTATCAGGGCTCTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................................AACC---AAGTAGTTCC---GGCATTG.........................................................................................................................................................................................................................2111.0010000000010
droPer2
T---------TTGTCGGCA---TTTCA-TTTAGTTTTATTCAAATTTTAATT-TTTTAAACATTTACAAGGTTAGTACGCACGCAATTTGAGG--AATT---------------------------------TTGTTTGGT-TTTTGTTCTTTTTTGTTGGCTGAAAGCCTCAGTACTGCTTT----------------------------ACAATTGACTAACC---AAGTAGTTTC---GGCATTGAGTGACCTCCACTCCG-TGGTATCCATTCCATCCTCATTTTTCAT----------GCAGGAGCCC-CATTTGCTCCA----------------------------TATTTTTTCGGGCTCAATTTGTGG---------------------------AAATTT-TCGGTGTAGATGTACGTGAATACTGTTAAATAATACATGTGTATCAGGTCTCCGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................AACATTTACAAGGTTAGTACG..................................................................................................................................................................................................................................................................................................................................................................................................2112.002000002
...................................................................................................................................................................................................................................................................................................................................................................................TTGTGG---------------------------AAATTT-TCGGTGTAG.............................................2111.001000001
droWil2
TTAGAC----TTGTCGGCT---TTTTT-TT--GTTTTAT------TGCAT-T-TTTCTCA--TTCATACGGTACGTACAAT-----TTGGTTG--------------------------------------------------------------------------------------CTTTTAAAAACTATTAAAATCTTAATGAGTTTATTGTTGACTAATT----CGTAGTTG------CATCCC----CAT-TT-------GATA-----------------------ATTACCCCTAC-------------------TCCCCATTTTTGGGGAGAAATGTTTGTTTTTAAGTT--------------------------------TT-----------CTTCTT-T----------------------------------------------TTCTCCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................ACGGTACGTACAAT-----TTGGTTG--------------------------------------------------------------------------------------CT............................................................................................................................................................................................................................................................................................2311.00100010

Generated: 05/18/2015 at 08:52 AM