dsi_22635

exon [2r_11813638_11814000_+]; CDS [2r_11813638_11814000_+]; exon [2r_11813337_11813466_+]; CDS [2r_11813337_11813466_+]; intron [2r_11813467_11813637_+]

Name	Class	Family	Strand
AT_rich	Low_complexity	Low_complexity	+

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## GCCACCGATGTTTGCACTGCAGATCTGCAGTTGAGGAGCAAGAATGTGAGGTACGTCAATATTTGTCTATTAAAAAGCACCTGTTGTTCGCAAAAGGATGAATTAATTCAGAGAATTAATAAAAATGTATATATTTTTTATACGTTTTTATTACGATTATTAGCACAAAACTTTACAGCACAACTTTCACTTATACAGTGTTACATTTTTCATCTCCACAGCCCCACATACATTTTGGGCAGTGCCGATACACTGCGCCTGAATTACGAGA ************************************************...((.(((((..(((..........)))..)))))..)).....(((((((.((((((...))))))(((((((((((((.......))))))))))))).........((((((...............................)))))).....)))))))......************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553487 NRT_0-2 hours eggs	M025 embryo	M024 male body	SRR553488 RT_0-2 hours eggs	M053 female body	SRR902009 testis	SRR553485 Chicharo_3 day-old ovaries	SRR553486 Makindu_3 day-old ovaries	SRR618934 dsim w501 ovaries	GSM343915 embryo
......................................................................................................................................................................................................TGTTACATTTTGAATCGCCACAG..................................................	23	3	1	4.00	4	4	0	0	0	0	0	0	0	0	0
..............................................................................................AGTATGAACTAATTCAGA...............................................................................................................................................................	18	2	9	2.11	19	15	0	0	1	0	0	2	1	0	0
..CACCGATGTTTGCACTGC...........................................................................................................................................................................................................................................................	18	0	1	2.00	2	0	1	1	0	0	0	0	0	0	0
.............................GTTGAGGAGCAAGAATGTGAGCC...........................................................................................................................................................................................................................	23	2	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.............................................................................................AAGTATGAACTAATTCAGA...............................................................................................................................................................	19	2	5	1.00	5	1	0	0	2	0	0	1	1	0	0
...........TTGCACTGCAGATCTGCAGTTGAGGAGC........................................................................................................................................................................................................................................	28	0	1	1.00	1	0	0	0	0	1	0	0	0	0	0
GCCACCGATGTTTGCACTGCAGATCTGC...................................................................................................................................................................................................................................................	28	0	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.CCACCGATGTTTGCACTGC...........................................................................................................................................................................................................................................................	19	0	1	1.00	1	0	1	0	0	0	0	0	0	0	0
GCCACCGATGTTTGCACTTCAGATCTGC...................................................................................................................................................................................................................................................	28	1	1	1.00	1	0	0	1	0	0	0	0	0	0	0
GCCACCGGTGTTTGCACTG............................................................................................................................................................................................................................................................	19	1	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................TGTGAAGGACGTCAATATATG..............................................................................................................................................................................................................	21	3	2	0.50	1	0	0	0	0	0	1	0	0	0	0
.............................................................................................AAGTATGAACTAATTCAG................................................................................................................................................................	18	2	8	0.38	3	2	0	0	1	0	0	0	0	0	0
...............................TGAGGAAGAAGAATGTCAGGT...........................................................................................................................................................................................................................	21	3	3	0.33	1	1	0	0	0	0	0	0	0	0	0
............................................................................................TAAGTATGAACTAATTCAGA...............................................................................................................................................................	20	3	13	0.31	4	1	0	0	1	0	0	2	0	0	0
...............................TGAAGGGCATGAATGTGAGGT...........................................................................................................................................................................................................................	21	3	4	0.25	1	0	0	0	1	0	0	0	0	0	0
..........................................ATTGTGAAGGACGTCAATAT.................................................................................................................................................................................................................	20	3	8	0.13	1	0	0	0	0	0	1	0	0	0	0
..............................................................TTTTCTATTAAAAACCACC..............................................................................................................................................................................................	19	2	8	0.13	1	0	0	0	0	0	0	0	1	0	0
..................................................................CTATTAAAAAGCGCC..............................................................................................................................................................................................	15	1	11	0.09	1	0	0	0	0	0	0	0	0	1	0
................................................................................................................................................TTTTTATTACAAATAGTAGCA..........................................................................................................	21	3	19	0.05	1	0	0	0	0	0	0	0	0	0	1
...................................................................................TTGTTGGCAAAAGGAGGA..........................................................................................................................................................................	18	2	19	0.05	1	0	0	0	1	0	0	0	0	0	0
..............................................................................................AGTATGAACTAATTCAG................................................................................................................................................................	17	2	20	0.05	1	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................TTCATCTACACAGCCGGAC............................................	19	3	20	0.05	1	0	0	1	0	0	0	0	0	0	0

CGGTGGCTACAAACGTGACGTCTAGACGTCAACTCCTCGTTCTTACACTCCATGCAGTTATAAACAGATAATTTTTCGTGGACAACAAGCGTTTTCCTACTTAATTAAGTCTCTTAATTATTTTTACATATATAAAAAATATGCAAAAATAATGCTAATAATCGTGTTTTGAAATGTCGTGTTGAAAGTGAATATGTCACAATGTAAAAAGTAGAGGTGTCGGGGTGTATGTAAAACCCGTCACGGCTATGTGACGCGGACTTAATGCTCT ************************************************...((.(((((..(((..........)))..)))))..)).....(((((((.((((((...))))))(((((((((((((.......))))))))))))).........((((((...............................)))))).....)))))))......************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M025 embryo	SRR553486 Makindu_3 day-old ovaries	M024 male body	SRR553488 RT_0-2 hours eggs
.........................................................................................................................................................................................................................TGTCGGGGTGTATGTAAAAC..................................	20	0	1	2.00	2	2	0	0	0
.........................................................................................................................................................................................................................GGTCGGGGTGTATGTAAAAC..................................	20	1	1	1.00	1	1	0	0	0
..................................................................................CAACAAGAGTTTTCCT.............................................................................................................................................................................	16	1	9	0.22	2	0	2	0	0
...................................................................................................................................................................................................................................................CGGATAAGTGACGCCGACT.........	19	3	15	0.07	1	0	0	1	0
....................................................TGCAGTTATGAACAGGTC.........................................................................................................................................................................................................	18	3	20	0.05	1	0	0	0	1
.........................................................................................................TAAGTCTCTTAATTAATCC...................................................................................................................................................	19	3	20	0.05	1	0	0	1	0

Species	Coordinate	ID	Alignment
droSim2	2r:11813417-11813687 +	dsi_22635	GCCACCGATGTTTGCACTGCAGATCTGCAGTTGAGGAGCAAGAATGTGAGGTACGTCAATAT-TTGTCTATTAAAA------AGCACCTGTTGTTCGCAAAAGGAT---G--------------------------------------------------------------------------------------------------------------------------------------AATTAATTCAGAGAATTAAT------------------------------------------------AAA--AATGTATATATTTTTTAT--ACGTTTTTATTACGA------TTATTAGCACAAA----ACTTTA---------CAGCAC-------AACTTTCACTTATACAGTGT------------------------------------------------------------------------TACA-----TTTTTCATCTCCACAGCCCCACATACATTTTGGGCAGTGCCGATACACTGCGCCTGAATTACGAGA
droSec2	scaffold_1:8636130-8636400 +	dse_694	GCCACCGATGTTTGCACTGCAGATCTGCAGTTGAGAAGCAAGAATGTGAGGTATGTCAATAT-TTGTTTATTAAAG------AGCACATGTTGTTCGCAACAGGAT---G--------------------------------------------------------------------------------------------------------------------------------------AATTAATTCAGAGATTTAAT------------------------------------------------AAA--AATATATATATTTTTTAC--ACGTTTTTATTACTA------TTATCAGCACACA----ACTTTA---------CATCAC-------AACTTTGACTTATACAGTGT------------------------------------------------------------------------TACA-----TTTTTCATCTCCACAGCCCCACATACATTTTGGGCAGTGCCGATACACTGCGCCTGAATTACGAGA
dm3	chr2R:11143518-11143787 +		GCCACGGATGTTTGCACTGCAGATCTGCAGTTGAGGAGCAAGGATGTGAGGTACGTCAATAT-TTGTCTATTAAAA------AGAACCTCTTGTTCGCAAATGGATTTTG--------------------------------------------------------------------------------------------------------------------------------------AACTAATTGTAAGAATTT-T------------------------------------------------AAAGATATATATAAATATTTTAC--ACGTTTTTATTTACA------TTATTAGCACACA----ATTTTA---------CATCAC-------AACTA-----TATACAGTGT------------------------------------------------------------------------TAAA-----TTGTTCATCTCCACAGCCCCACTTACATTTTGGGCAGTGCCGATACACTGCGCCTGAATTACGAGA
droEre2	scaffold_4845:14726753-14726982 -		GCCACCAATATTTGCACTGCAGATCTGCAGTTGAGGAGCAAGAATGTGAGGTATGTCAATGA-CCATTTGATAGAGATCTTTAGCACATC------------------------------------------------------------------------------------------------------------------TCT---------GCACGTATTGC----------------------------------------------------------------------------------------------------------------------ATCACAATTATACTCGTAAGCACCCC----AATTTA---------CATCAT-------ACCTTTGACTTATAAAGCGT------------------------------------------------------------------------TCCA-----T-TTTCGTTTCCACAGCCCCACTTACATTTTGGGCAGTGCCGATACACTGCGCCTGAACTACGAGA
droYak3	2R:11063814-11064024 +		GCCACCGATGTTTGCACTGCTGATCTGCAGTTGAGGAGCAAGAATGTGAGGTATGTCAAAA-TCAGAG----------------------------------------------CCAT-----------------------------------------------------------------------------------------TCTAGTTTG---------------------------------------------------------------------------------------------------------TTTTTATATTTAAA--ACGTTTTAAT------------------CGCAGT----AATTTA---------GCGTAG-------AACTATGACTTATAATGTGT------------------------------------------------------------------------TATA-----T-TTTTATTTCCCCAGCCCCAATTACATTTTGGGCAGTGCCGATACACTGCGCCTGAACTACGAGA
droEug1	scf7180000409672:6340-6502 +		GCCACCGATATTTGTGTCGTTGATTTGCAGTTAATCAGCAAAAACTGGAGGTATGGTCATG-GA----------------------------------------------AT--ATTATA------------------------------------------------------------------------------------------------------------AGC-----------------------------------------------------------------------------------------ATGTGACTGAAATAG--A----------------------------------TTC------TCT----------------AA-------------------------------------------------------------------------------------------------------ATTATATCTTAATAGCTCTACTTATGTTTTGGGCACTACTAAAGTCCTTGCTCTAAATTACGAGA
droBia1	scf7180000302143:263711-264010 -		GCCGCCGATGTTTGTATTGCAGATCTGCAGTTGAGGAGCAAGAATGTGAGGTAAGTAAGCAA-TAA-------------------------------------------------------CACC-AAGGATATCCTATTAAATGTCAGAAGTCCATTTATTCAGCGTAGAAAAAT-------------------AAAT----AAC----------GTTCTAAATAAT-ACATC------------------A----------------GA------AA----ATTGTATGATAACCCAATACATGTTACTCATGGGTAAATATGAGTGATTTGC--CCAT----------------------------------------TTAATTTTTTATCAG-------AGTTAACATAAATT---------------------------------------------------------------------------------C-----TTTAAAATTTCCATAGCCCCACTTACGTACTGGGAAGTGCCGATACCCTGCGCATCGACTACAAGA
droTak1	scf7180000415609:174176-174428 +		TCCAATGATACTTGCGTGGCTGATCTGAAGCTAAGGATCTCATATGCGAGGTAAGGAAATAT-ATGAGGGT----------------------------------T-G--TGTTCTTATACCCTAAG--------------------------------------------------------------------------------AAAAG-----------------------------------------------------------------------------------------------------------------GTCGT----------------------------------------------------T----------------TAAT-------------T-----TTAACCCGAAGTTTGTAATATATACTTTTTACTATTTTTCTCATTTGAAATAACTGCAAGTTTTATACAGTATTTAAAAGTATTTAATTTTCTCCTAGCTCCGAATTTATTTTGGGTTCTTCCGACACCCTACGTCTGAGATACGACA
droEle1	scf7180000491214:4005941-4006143 +		GCCTCCGATGTTTGTGTCCCTGATCTTCAAATTAGCAGCAAGAATGTGAGGTATGCCAAGT-GCAGGGTAATATATATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATATGAGTAATACGC--A----------------------------------TTC------TGTAATACTTATCAG-------GGTCATGACTCATACTAT-T------------------------------------------------------------------------CGCA------TTTCAATTTTCATAGCTCAAAATATATTTTGGGCAGTTCCGATACCCTGCGTCTGAATTATAAGA
droRho1	scf7180000776849:693313-693638 -		GCCACCGCTGTTTGTACAGCCGATCTGCAGTTGAGGAGCAAAAATGTGGGGTAAGTCAATGT-TGGGGAGC----------------------------------T-----------AAA--TTCAAGAGAAATTGCATTGAAAGTAGGCAAAAGTTGTATTCAAAATAACCACCT-------------------AGATATCCAAC----------GTTGTGGGTGCAGTGATTTATGG----------------GGATCTCATAAGCTGAGCGCTTAACTTTCTTGTTT--------------------------------------------TGT-----TTGATT--CATTA----AATAAGCAAACACTCTCATT-T---------TATCAG-------AGCGATGACTTATACCGTCT------------------------------------------------------------------------TACT-------TTTTTCTTTTCCAGCCCCATTTTTATTTTGGGCAGTGCCAATACACTCCGACTAAATTACGAGA
droFic1	scf7180000453342:782456-782749 -		GCCACCGATGTTTGCACCGCTGATCTGCAGTTGAGGAGCAAGAATGTGAGGTAAGTAACTGT-CACC-----------------------------------------------------------GAATATATTTTATATAACG------------------------------TTTGCTTAAGAAGAAAAAAC--------AACT---------GCACGCGTTGCAGAGATCCGAGCGAATGAATTAACTT----------------GAA--GTTAA----TTTGTATAGTTACTCATTGCT-------------TAAATATGAGTAACTAAA--A----------------------------------TCTTATTTG---------GATGAG-------AGCTATGACTAA-----TGT------------------------------------------------------------------------TTCC-----TCTCTTATATTCCCAGCCCCACTTATATTTTGGGCAGTGCCGATACTCTGCGCCTGAACTACGAGA
droKik1	scf7180000302476:155184-155342 +		GCCAACGATGTCTGCAACGCCGATCTGCAACTTAAGAGCAAGGATGTGAGGTAAGCTGAAA-AC----------------------------------------------ACTTTTTA-----------------------------------------------------------------------------------------ATTTTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTGGTCTTAACA------------------C--T--------------------------------------------------------------------------------TTCCTCTTTTTTAGCTCCACTTATATCCTGGGCAGCGCCGACACTCTCCGCCTGAACTACGAGA
droAna3	scaffold_13266:7565671-7565833 +		GCCACAGCAGTTTGCGTGGCTGATCTCCAGTTGAAGAGCAAGAATGTTAGGTAAGGATG---------------------------------------------------GGTTACCATACTTCCTA--------------------------------------------------------------------------------GGGAA-----------------------------------------------------------------------------------------------------------------ACTGA----------------------------------------------------C----------------TAAC-------------T-----CTCC------------------------------------------------------------------------T-----TAAATGCATCTTACAGCCCCACCTACATCCTGGGCAGTGCAGATATCCTTCGTCTCAACTACGAGA
droBip1	scf7180000396759:1254274-1254336 -		TTTAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTACAGCCCCACGTACATCCTGGGCAGTGCCGATATCCTTCGTCTCAACTACGAGA
dp5	3:539070-539228 +		GCAACTGATATTTGTATTGCAGACTTACAACTGAAAAGCAAGGATGTGAGGTAACCCCGA--TC----------------------------------------------AGTTTCCA-----------------------------------------------------------------------------------------TTTAGTTTG-----------------------------------------------------------------------------------------------------------------GTAAT-------------------------------------------------------------ATTCTAACA------------------G--A--------------------------------------------------------------------------------TTCTTATTTTATAGCCCTACCTACACCTTGGGGAGTGGCAATACTCTCCGCTTGAACTACGAGA
droPer2	scaffold_2:704087-704245 +		GCAACTGATATTTGTATTGCAGACTTACAACTGAAAAGCAAGGATGTGAGGTAACCCCGA--TC----------------------------------------------AGTTTCCA-----------------------------------------------------------------------------------------TTTAGTTTG-----------------------------------------------------------------------------------------------------------------GTAAT-------------------------------------------------------------ATTCTAACA------------------G--A--------------------------------------------------------------------------------TTCTTATTTTATAGCCCTACCTACACCTTGGGGAGTGGCAATACTCTCCGCTTGAACTACGAGA
droWil2	scf2_1100000004510:1308408-1308575 +		GCCAGTGAAATCTGCATAGCTGACTTGCATTTGACCGCCAAGGATGTGAGGTAGGTCACA--TG----------------------------------------------ACTTTGGA-----------------------------------------------------------------------------------------TTGAC-----------------------------------------------------------------------------------------------------------------ACTGAAAGAA--G---------------------------------------TCCACA----------------TAAT-------------T-----AACC------------------------------------------------------------------------T-----TTTCTTTCTCTATTAGCTCCACTTTCACTTTGGGTAGTGCCAATGTCCTGCGTTTGAATTACGAAA
droVir3	scaffold_10324:907958-908134 -	dvi_823	GCCACCGACGTGTGCATTGCCGACCTGAAGCTGAGCGCCAAGGATGTGAGGTAACTAAGAAA-AAC---------------------------------------------------------------------------AACT------------------------------TTTGACAAAAAAAAAAAAAA--------AA---------------------------------------------ACT----------------GAA--GT-----------------------------------------------------------------------------------------------------------------------------------------TA--TAATGA------------------------------------------------------------------------TTCG-----TTTTTTATCCTTACAGCTCCAGCTATATACTGGGCAGCGACAAGACGCTGCGCCTGAACTACGAGG
droMoj3	scaffold_6496:2775436-2775598 -		GCCACAGACGTTTGCATAGCCGATCTAAAGCTGACTGCCAAGGACTTTAGGTAAGCCAGAG--A----------------------------------------------AC--AGTA--------------------------------------------------------------------------------------------------GAACTTGT----------------------------------------------------------------------------------------------------------------------------------------------AGAAC----AGTTTG---------TAT-------AACAG--------------------C------------------------------------------------------------------------T-----TTCTCTATTCCAACAGTCCGAGCTATATTCTGGGCAGTGGCAAAACCCTCCGCATCAACTATGAGG
droGri2	scaffold_15245:8590961-8591125 -		AAGACAGATATATGCGTTGCCGATCTGCAGCTGAGCGCCAAGGATGTGAGGTAAGGCAGCA-GC-------------------------------------------------TCTCA-----------------------------------------------------------------------------------------TAT------------GC-------------------------------------------------------------TGTAT--------------------------------------------AGA-----TTGCAT--CATTA---------------------------------------------AATG------------------A--T----------------------------------------------------------------------TTG-------CTCTTTAACTCTAGCTCCAGCTACATACTGGGCAGCGACAAGACTCTGCGCATCAATTACGAGG

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

GCCACCGATGTTTGCACTGCAGATCTGCAGTTGAGGAGCAAGAATGTGAGGTACGTCAATAT-TTGTCTATTAAAA------AGCACCTGTTGTTCGCAAAAGGAT---G--------------------------------------------------------------------------------------------------------------------------------------AATTAATTCAGAGAATTAAT------------------------------------------------AAA--AATGTATATATTTTTTAT--ACGTTTTTATTACGA------TTATTAGCACAAA----ACTTTA---------CAGCAC-------AACTTTCACTTATACAGTGT------------------------------------------------------------------------TACA-----TTTTTCATCTCCACAGCCCCACATACATTTTGGGCAGTGCCGATACACTGCGCCTGAATTACGAGA	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
..CACCGATGTTTGCACTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	2.00	2	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................GTTGAGGAGCAAGAATGTGAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	2	1.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........TTGCACTGCAGATCTGCAGTTGAGGAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
GCCACCGATGTTTGCACTGCAGATCTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.CCACCGATGTTTGCACTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSec2

GCCACCGATGTTTGCACTGCAGATCTGCAGTTGAGAAGCAAGAATGTGAGGTATGTCAATAT-TTGTTTATTAAAG------AGCACATGTTGTTCGCAACAGGAT---G--------------------------------------------------------------------------------------------------------------------------------------AATTAATTCAGAGATTTAAT------------------------------------------------AAA--AATATATATATTTTTTAC--ACGTTTTTATTACTA------TTATCAGCACACA----ACTTTA---------CATCAC-------AACTTTGACTTATACAGTGT------------------------------------------------------------------------TACA-----TTTTTCATCTCCACAGCCCCACATACATTTTGGGCAGTGCCGATACACTGCGCCTGAATTACGAGA	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
..................GCAGATCTGCAGTTGAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	3.00	3	0	0	3	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGATACACTGCGCCTGA.........	20	1	2.00	2	0	0	2	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCGATACACTGCGCCTG..........	20	1	2.00	2	0	0	2	0
.............................GTTGAGAAGCAAGAATGTGAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0
....................AGATCTGCAGTTGAGAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGATACACTGCGCCTG..........	19	1	1.00	1	0	0	1	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGATACACTGCGCCT...........	18	1	1.00	1	0	0	1	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGGCAGTGCCGATACACT.................	22	1	1.00	1	0	0	1	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCGATACACTGCGCCTGAA........	22	1	1.00	1	1	0	0	0

dm3

GCCACGGATGTTTGCACTGCAGATCTGCAGTTGAGGAGCAAGGATGTGAGGTACGTCAATAT-TTGTCTATTAAAA------AGAACCTCTTGTTCGCAAATGGATTTTG--------------------------------------------------------------------------------------------------------------------------------------AACTAATTGTAAGAATTT-T------------------------------------------------AAAGATATATATAAATATTTTAC--ACGTTTTTATTTACA------TTATTAGCACACA----ATTTTA---------CATCAC-------AACTA-----TATACAGTGT------------------------------------------------------------------------TAAA-----TTGTTCATCTCCACAGCCCCACTTACATTTTGGGCAGTGCCGATACACTGCGCCTGAATTACGAGA	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
....................AGATCTGCAGTTGAGGAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	2	0	0	0	0	0	2	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGATACACTGCGCCTG..........	19	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	1	0	0	0	0	0	0
..........TTTGCACTGCAGATCTGCAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
GCCACGGATGTTTGCACTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGATACACTGCGCCTGA.........	20	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.....................GATCTGCAGTTGAGGAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGCCTGAATTACGAG.	18	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................TGAGGAGCAAGGATGTGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
............................AGTTGAGGAGCAAGGATGTGAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
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....................AGATCTGCAGTTGAGGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.............................GTTGAGGAGCAAGGATGTGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............GCACTGCAGATCTGCAGTTGAGGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGATACACTGCGCCTGAATTA.....	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................GCAGATCTGCAGTTGAGGAGCAAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCCACTTACATTTTGGGC...............................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................GCAGTTGAGGAGCAAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................CTGCAGTTGAGGAGCAAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

GCCACCAATATTTGCACTGCAGATCTGCAGTTGAGGAGCAAGAATGTGAGGTATGTCAATGA-CCATTTGATAGAGATCTTTAGCACATC------------------------------------------------------------------------------------------------------------------TCT---------GCACGTATTGC----------------------------------------------------------------------------------------------------------------------ATCACAATTATACTCGTAAGCACCCC----AATTTA---------CATCAT-------ACCTTTGACTTATAAAGCGT------------------------------------------------------------------------TCCA-----T-TTTCGTTTCCACAGCCCCACTTACATTTTGGGCAGTGCCGATACACTGCGCCTGAACTACGAGA	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
........................CTGCAGTTGAGGAGCAAGAATGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	4.00	4	3	0	1	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCGATACACTGCGCCTG..........	20	1	2.00	2	0	0	0	1	0	1	0
........................CTGCAGTTGAGGAGCAAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	0	0	0	0	1	1	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCGATACACTGCGCCTGA.........	21	1	1.00	1	0	0	0	0	1	0	0
..........................GCAGTTGAGGAGCAAGAATGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCCGATACACTGCGCCTGAA........	23	1	1.00	1	1	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACACTGCGCCTGAACTACGA..	23	1	1.00	1	1	0	0	0	0	0	0
..........................GCAGTTGAGGAGCAAGAATGTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCGATACACTGCGCCT...........	19	1	1.00	1	0	0	0	1	0	0	0
.............................GTTGAGGAGCAAGAATGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	1	0	0
....................AGATCTGCAGTTGAGGAGCAAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0	0
.....................GATCTGCAGTTGAGGAGCAAGAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCGATACACTGCGCCTGAAC.......	23	1	1.00	1	0	1	0	0	0	0	0
GCCACCAATATTTGCACTGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
..................GCAGATCTGCAGTTGAGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0
GCCACCAATATTTGCACTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0

droYak3

GCCACCGATGTTTGCACTGCTGATCTGCAGTTGAGGAGCAAGAATGTGAGGTATGTCAAAA-TCAGAG----------------------------------------------CCAT-----------------------------------------------------------------------------------------TCTAGTTTG---------------------------------------------------------------------------------------------------------TTTTTATATTTAAA--ACGTTTTAAT------------------CGCAGT----AATTTA---------GCGTAG-------AACTATGACTTATAATGTGT------------------------------------------------------------------------TATA-----T-TTTTATTTCCCCAGCCCCAATTACATTTTGGGCAGTGCCGATACACTGCGCCTGAACTACGAGA	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
...........TTGCACTGCTGATCTGCAGTTGAGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	13.00	13	0	0	1	0	0	0	0	0	0	0	12
............TGCACTGCTGATCTGCAGTTGAGGAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	2.00	2	0	0	1	0	0	0	1	0	0	0	0
..................GCTGATCTGCAGTTGAGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTACATTTTGGGCAGTGC..........................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...........TTGCACTGCTGATCTGCAGTTGAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........GTTTGCACTGCTGATCTGCAGTTGAGGAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	30	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
GCCACCGATGTTTGCACTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
........................CTGCAGTTGAGGAGCAAGAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGATACACTGCGCCTGAA........	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGATACACTGCGCCTGAAC.......	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGCCGATACACTGCGCCTG..........	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..............CACTGCTGATCTGCAGTTGAGGAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACATTTTGGGCAGTGCCGAT......................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGATACACTGCGCCT...........	18	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATACACTGCGCCTGAACTACGA..	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTACATTTTGGGCAGTGCC.........................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..................GCTGATCTGCAGTTGAGGAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0

droEug1

GCCACCGATATTTGTGTCGTTGATTTGCAGTTAATCAGCAAAAACTGGAGGTATGGTCATG-GA----------------------------------------------AT--ATTATA------------------------------------------------------------------------------------------------------------AGC-----------------------------------------------------------------------------------------ATGTGACTGAAATAG--A----------------------------------TTC------TCT----------------AA-------------------------------------------------------------------------------------------------------ATTATATCTTAATAGCTCTACTTATGTTTTGGGCACTACTAAAGTCCTTGCTCTAAATTACGAGA	Size	Hit Count	Total Norm	Total
No Reads

droBia1

GCCGCCGATGTTTGTATTGCAGATCTGCAGTTGAGGAGCAAGAATGTGAGGTAAGTAAGCAA-TAA-------------------------------------------------------CACC-AAGGATATCCTATTAAATGTCAGAAGTCCATTTATTCAGCGTAGAAAAAT-------------------AAAT----AAC----------GTTCTAAATAAT-ACATC------------------A----------------GA------AA----ATTGTATGATAACCCAATACATGTTACTCATGGGTAAATATGAGTGATTTGC--CCAT----------------------------------------TTAATTTTTTATCAG-------AGTTAACATAAATT---------------------------------------------------------------------------------C-----TTTAAAATTTCCATAGCCCCACTTACGTACTGGGAAGTGCCGATACCCTGCGCATCGACTACAAGA	Size	Hit Count	Total Norm	Total
No Reads

droTak1

TCCAATGATACTTGCGTGGCTGATCTGAAGCTAAGGATCTCATATGCGAGGTAAGGAAATAT-ATGAGGGT----------------------------------T-G--TGTTCTTATACCCTAAG--------------------------------------------------------------------------------AAAAG-----------------------------------------------------------------------------------------------------------------GTCGT----------------------------------------------------T----------------TAAT-------------T-----TTAACCCGAAGTTTGTAATATATACTTTTTACTATTTTTCTCATTTGAAATAACTGCAAGTTTTATACAGTATTTAAAAGTATTTAATTTTCTCCTAGCTCCGAATTTATTTTGGGTTCTTCCGACACCCTACGTCTGAGATACGACA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

GCCTCCGATGTTTGTGTCCCTGATCTTCAAATTAGCAGCAAGAATGTGAGGTATGCCAAGT-GCAGGGTAATATATATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATATGAGTAATACGC--A----------------------------------TTC------TGTAATACTTATCAG-------GGTCATGACTCATACTAT-T------------------------------------------------------------------------CGCA------TTTCAATTTTCATAGCTCAAAATATATTTTGGGCAGTTCCGATACCCTGCGTCTGAATTATAAGA	Size	Hit Count	Total Norm	Total
No Reads

droRho1

GCCACCGCTGTTTGTACAGCCGATCTGCAGTTGAGGAGCAAAAATGTGGGGTAAGTCAATGT-TGGGGAGC----------------------------------T-----------AAA--TTCAAGAGAAATTGCATTGAAAGTAGGCAAAAGTTGTATTCAAAATAACCACCT-------------------AGATATCCAAC----------GTTGTGGGTGCAGTGATTTATGG----------------GGATCTCATAAGCTGAGCGCTTAACTTTCTTGTTT--------------------------------------------TGT-----TTGATT--CATTA----AATAAGCAAACACTCTCATT-T---------TATCAG-------AGCGATGACTTATACCGTCT------------------------------------------------------------------------TACT-------TTTTTCTTTTCCAGCCCCATTTTTATTTTGGGCAGTGCCAATACACTCCGACTAAATTACGAGA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

GCCACCGATGTTTGCACCGCTGATCTGCAGTTGAGGAGCAAGAATGTGAGGTAAGTAACTGT-CACC-----------------------------------------------------------GAATATATTTTATATAACG------------------------------TTTGCTTAAGAAGAAAAAAC--------AACT---------GCACGCGTTGCAGAGATCCGAGCGAATGAATTAACTT----------------GAA--GTTAA----TTTGTATAGTTACTCATTGCT-------------TAAATATGAGTAACTAAA--A----------------------------------TCTTATTTG---------GATGAG-------AGCTATGACTAA-----TGT------------------------------------------------------------------------TTCC-----TCTCTTATATTCCCAGCCCCACTTATATTTTGGGCAGTGCCGATACTCTGCGCCTGAACTACGAGA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

GCCAACGATGTCTGCAACGCCGATCTGCAACTTAAGAGCAAGGATGTGAGGTAAGCTGAAA-AC----------------------------------------------ACTTTTTA-----------------------------------------------------------------------------------------ATTTTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTGGTCTTAACA------------------C--T--------------------------------------------------------------------------------TTCCTCTTTTTTAGCTCCACTTATATCCTGGGCAGCGCCGACACTCTCCGCCTGAACTACGAGA	Size	Hit Count	Total Norm	Total
No Reads

droAna3

GCCACAGCAGTTTGCGTGGCTGATCTCCAGTTGAAGAGCAAGAATGTTAGGTAAGGATG---------------------------------------------------GGTTACCATACTTCCTA--------------------------------------------------------------------------------GGGAA-----------------------------------------------------------------------------------------------------------------ACTGA----------------------------------------------------C----------------TAAC-------------T-----CTCC------------------------------------------------------------------------T-----TAAATGCATCTTACAGCCCCACCTACATCCTGGGCAGTGCAGATATCCTTCGTCTCAACTACGAGA	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATATCCTTCGTCTCAAC.......	19	1	1.00	1	0	1	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGCAGTGCAGATATCCTTCGTCC...........	26	1	1.00	1	0	1	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCACCTACATCCTGGGC...............................	19	1	1.00	1	0	1	0	0	0	0
...........TTGCGTGGCTGATCTCCAGTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGTGCAGATATCCTTCGTCTCAAC.......	26	1	1.00	1	0	1	0	0	0	0

droBip1

TTTAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTACAGCCCCACGTACATCCTGGGCAGTGCCGATATCCTTCGTCTCAACTACGAGA	Size	Hit Count	Total Norm	Total
No Reads

dp5

GCAACTGATATTTGTATTGCAGACTTACAACTGAAAAGCAAGGATGTGAGGTAACCCCGA--TC----------------------------------------------AGTTTCCA-----------------------------------------------------------------------------------------TTTAGTTTG-----------------------------------------------------------------------------------------------------------------GTAAT-------------------------------------------------------------ATTCTAACA------------------G--A--------------------------------------------------------------------------------TTCTTATTTTATAGCCCTACCTACACCTTGGGGAGTGGCAATACTCTCCGCTTGAACTACGAGA	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATACTCTCCGCTTGAACTACGAG.	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCAATACTCTCCGCTTGAACT......	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................CAACTGAAAAGCAAGGATGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCAATACTCTCCGCTTGAACTACGA..	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................TGAAAAGCAAGGATGTGAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACACCTTGGGGAGTGGC.........................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............GTATTGCAGACTTACAACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTACACCTTGGGGAGTGGC.........................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................ACTGAAAAGCAAGGATGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGGGGAGTGGCAATACTCTCCGCTT...........	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................ACAACTGAAAAGCAAGGATGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	1
........................TTACAACTGAAAAGCAAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................GAAAAGCAAGGATGTGAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	2	0.50	1	0	0	1	0	0	0	0	0	0	0

droPer2

GCAACTGATATTTGTATTGCAGACTTACAACTGAAAAGCAAGGATGTGAGGTAACCCCGA--TC----------------------------------------------AGTTTCCA-----------------------------------------------------------------------------------------TTTAGTTTG-----------------------------------------------------------------------------------------------------------------GTAAT-------------------------------------------------------------ATTCTAACA------------------G--A--------------------------------------------------------------------------------TTCTTATTTTATAGCCCTACCTACACCTTGGGGAGTGGCAATACTCTCCGCTTGAACTACGAGA	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
...........................CAACTGAAAAGCAAGGATGTGAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	2.00	2	2	0	0	0	0	0
...............ATTGCAGACTTACAACTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
....................AGACTTACAACTGAAAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0
.............GTATTGCAGACTTACAACTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACACCTTGGGGAGTGGCA........................	20	1	1.00	1	0	1	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACTCTCCGCTTGAACTACGA..	23	1	1.00	1	0	0	1	0	0	0
...............ATTGCAGACTTACAACTGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0

droWil2

GCCAGTGAAATCTGCATAGCTGACTTGCATTTGACCGCCAAGGATGTGAGGTAGGTCACA--TG----------------------------------------------ACTTTGGA-----------------------------------------------------------------------------------------TTGAC-----------------------------------------------------------------------------------------------------------------ACTGAAAGAA--G---------------------------------------TCCACA----------------TAAT-------------T-----AACC------------------------------------------------------------------------T-----TTTCTTTCTCTATTAGCTCCACTTTCACTTTGGGTAGTGCCAATGTCCTGCGTTTGAATTACGAAA	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTCACTTTGGGTAGTGCCAAT......................	24	1	2.00	2	0	1	1	0	0
....GTGAAATCTGCATAGCTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0
...AGTGAAATCTGCATAGCTGACTTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0
..........................GCATTTGACCGCCAAGGATGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTCCTGCGTTTGAATTA.....	20	1	1.00	1	0	0	0	0	1
..............................TTGACCGCCAAGGATGTGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0
........................TTGCATTTGACCGCCAAGGATGTGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	1	0	0
..........................GCATTTGACCGCCAAGGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCCAATGTCCTGCGTTTG..........	21	1	1.00	1	0	0	1	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCAATGTCCTGCGTTT...........	19	1	1.00	1	0	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTCACTTTGGGTAGTGCCAAT......................	23	1	1.00	1	0	0	0	1	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTAGTGCCAATGTCCTGCGT.............	23	1	1.00	1	0	0	1	0	0
....GTGAAATCTGCATAGCTGACTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0
...............ATAGCTGACTTGCATTTGACCGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0
.............................TTTGACCGCCAAGGATGTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCACTTTGGGTAGTGCCAAT......................	22	1	1.00	1	0	0	1	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCACTTTGGGTAGTGCCA........................	19	1	1.00	1	0	0	0	1	0

droVir3

GCCACCGACGTGTGCATTGCCGACCTGAAGCTGAGCGCCAAGGATGTGAGGTAACTAAGAAA-AAC---------------------------------------------------------------------------AACT------------------------------TTTGACAAAAAAAAAAAAAA--------AA---------------------------------------------ACT----------------GAA--GT-----------------------------------------------------------------------------------------------------------------------------------------TA--TAATGA------------------------------------------------------------------------TTCG-----TTTTTTATCCTTACAGCTCCAGCTATATACTGGGCAGCGACAAGACGCTGCGCCTGAACTACGAGG	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
...............ATTGCCGACCTGAAGCTGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................TGAGCGCCAAGGATGTGAGGTAACT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAAGACGCTGCGCCTGAACTACGA..	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................TGCCGACCTGAAGCTGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....CCGACGTGTGCATTGCCGACCTGAAGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGACGCTGCGCCTGAA........	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAAGACGCTGCGCCT...........	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................CGACCTGAAGCTGAGCGCCAAGGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...ACCGACGTGTGCATTGCCGACCTGAAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................CGACCTGAAGCTGAGCGCCAAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
................................GAGCGCCAAGGATGTGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
GCCACCGACGTGTGCATTGCCGACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGGCAGCGACAAGACG...................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................CGACCTGAAGCTGAGCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATACTGGGCAGCGACA........................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

GCCACAGACGTTTGCATAGCCGATCTAAAGCTGACTGCCAAGGACTTTAGGTAAGCCAGAG--A----------------------------------------------AC--AGTA--------------------------------------------------------------------------------------------------GAACTTGT----------------------------------------------------------------------------------------------------------------------------------------------AGAAC----AGTTTG---------TAT-------AACAG--------------------C------------------------------------------------------------------------T-----TTCTCTATTCCAACAGTCCGAGCTATATTCTGGGCAGTGGCAAAACCCTCCGCATCAACTATGAGG	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
...........TTGCATAGCCGATCTAAAGCTGACTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	2.00	2	2	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGTGGCAAAACCCTCCGC.............	20	1	1.00	1	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGAGCTATATTCTGGGCAGT............................	21	1	1.00	1	1	0	0	0	0	0
............TGCATAGCCGATCTAAAGCTGACTGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
.....................GATCTAAAGCTGACTGCCAAGGACTTTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
..................GCCGATCTAAAGCTGACTGCCAAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0

droGri2

AAGACAGATATATGCGTTGCCGATCTGCAGCTGAGCGCCAAGGATGTGAGGTAAGGCAGCA-GC-------------------------------------------------TCTCA-----------------------------------------------------------------------------------------TAT------------GC-------------------------------------------------------------TGTAT--------------------------------------------AGA-----TTGCAT--CATTA---------------------------------------------AATG------------------A--T----------------------------------------------------------------------TTG-------CTCTTTAACTCTAGCTCCAGCTACATACTGGGCAGCGACAAGACTCTGCGCATCAATTACGAGG	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

dsi_22635

2r:11813467-11813637 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Repeatable elements

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads