ID:

dsi_22582

 Coordinate:

3l:20353449-20353602 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.6 -8.6 -8.5

Flybase annnotation

exon [3l_20353603_20354541_+]; CDS [3l_20353603_20354450_+]; CDS [3l_20353250_20353448_+]; exon [3l_20353167_20353448_+]; intron [3l_20353449_20353602_+]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TCGGCGGCGTTTTCTGGCTGTGCCCGTCATCTGTCCAAGTCTCGTCAAGCGTAATCTATCCGTACATACGTGTTTAATCTAATCTCTGCCTGCGCTGCACTTCCATTTCCCAGTATCTACGCTTTTTGTGCGTCCGTAGCTAGTCAGTCTGTTTATCTGTTGGCCATCTATGTAGCTAAATGTGAAACCATCGCTTCGTTTCAGTGCAAAAACTACGCAAAGTCGGCTTCAGAGGCATGCACAGCACATTGGAG
********************************************************************************************************************************(((((..((.(((((.(((.........)))))))).))..))))).................*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902008
ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M023
head
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 M053
female body
 O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
.....................................................................................................................................................................................................................TACGCAAAGTCGGCTTCAGAGGCA................. 24 0 1 3.00 3 0 1 0 0 0 2 0 0 0 0 0
.....................................................................................................................................................................................................................TACGCAAAGTCGGCTTCAGAGGCATG............... 26 0 1 3.00 3 2 0 0 0 0 0 0 0 0 0 1
.....................................................................................................................................................................................................................TACGCAAAGTCGGCTTCAGAGGCATGCAC............ 29 0 1 2.00 2 1 0 0 0 0 0 0 0 1 0 0
............................................................................................................................................................................................................TGCAAAAACTACGCAAAGTCGGCTTC........................ 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................ACTACGCAAAGTCGGCTTCAGAGGCA................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................ACTACGCAAAGTCGGCTTCAGAGGGA................. 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................TCCAATGCAAAAACTACGCAAAGTCGGC........................... 28 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TCCTGCAAAAACTACGCAAAGTCGGC........................... 26 3 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
..............................CTGTCCAAGTCTCGTCAAGCG........................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TCGGCTTCAGAGGCATGCACAGCACA...... 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................................ATCTATGTAGCTAAATGTGAAACCAT............................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TTCAGAGGCATGCACAGCACATTGGA. 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
..GGCGGCGTTTTCTGGCTG.......................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................TGCGTCCGTAGCTAGTCAGTC......................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................................................................CAATGCAAAAACTACGCAAAGTCGGC........................... 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TCCAGAGGCATGCACAGCACATTGGA. 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AAAAACTACGCAAAGTCGGC........................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................AAAAACTACGCAAAGTCGGCT.......................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................................................................................................................................................AAAGTCGGCTTCAGAGGC.................. 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................TGTTTATCTGTTGGCCATCTATGTAG............................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................TAAATGTGAAACCATCGCT........................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TTGCAAAAACTACGCAAAGTCGGCTTC........................ 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................AGCTGCAAAAACTACGCAAAGTCGGC........................... 26 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........TTTTCTGGCTGTGCCCGTCATCTGTC........................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TACGCAAAGTCGGCTTCAGAGGGATGCC............. 28 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................AACTACGCAAAGTCGGCTTCAGAGGCA................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................TCCGTAGCTAGTCTG........................................................................................................... 15 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................CGGTAGCTTGTCAGTCT........................................................................................................ 17 2 7 0.14 1 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................................................................................................GTAGCTAATTGTGTAACC................................................................. 18 2 8 0.13 1 0 0 0 1 0 0 0 0 0 0 0
...............................AGTTCAAGTCTCGTCAACC............................................................................................................................................................................................................ 19 3 12 0.08 1 0 0 0 1 0 0 0 0 0 0 0
................................GTTCAGGTCTCGTCAACC............................................................................................................................................................................................................ 18 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................ACTTGGATTTCCCAGTA........................................................................................................................................... 17 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

AGCCGCCGCAAAAGACCGACACGGGCAGTAGACAGGTTCAGAGCAGTTCGCATTAGATAGGCATGTATGCACAAATTAGATTAGAGACGGACGCGACGTGAAGGTAAAGGGTCATAGATGCGAAAAACACGCAGGCATCGATCAGTCAGACAAATAGACAACCGGTAGATACATCGATTTACACTTTGGTAGCGAAGCAAAGTCACGTTTTTGATGCGTTTCAGCCGAAGTCTCCGTACGTGTCGTGTAACCTC
***************************************************************(((((..((.(((((.(((.........)))))))).))..))))).................******************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
.......................GGCAGTAGACAGGTTCAGAGC.................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0
.........................CAGTAGACAGGGACAGAGCAGTT.............................................................................................................................................................................................................. 23 2 1 1.00 1 1 0 0 0 0
.....................................................................................................................ATGCGAAAAAGCCGCAGG....................................................................................................................... 18 2 2 0.50 1 0 0 1 0 0
...........................................................................................CGCGACGAGAAGGTAAAGGA............................................................................................................................................... 20 2 7 0.14 1 1 0 0 0 0
...............................................................................................CCGTGAAGGTAAAGGGT.............................................................................................................................................. 17 1 8 0.13 1 0 0 1 0 0
...............................................TCGCATTTGATAGGC................................................................................................................................................................................................ 15 1 9 0.11 1 0 0 0 1 0
.............................................GGTCGCATTTGATAGGCTT.............................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 1 0
................................................................GTAGGCACAAGGTAGATTA........................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:20353399-20353652 + dsi_22582 TCGGCGGCGTTTTCTGGCTGTGCCCGTCATCTGTCC---------------AAGTC--TCGTCAAGCGTAATCTATCCG---------------------TACATAC-GTGTTTAATCTAATCTCTG--------------------------------------------------------------------------------------CCTGC--GC-------TGCACTT----------C----C----------------------A-TTTCCCAGTATC----TACGCTTTT-TGTGC----GTCCGTAGCTAGTCAGTCTGTTTAT---------------------CTGTTG-GCCATC---------TA-TGT-----------------------AGC--------------TAAATGTGAAACC------------------A-----TC------------GCTTC-GTTTCAGTGCAAAAACTACGCAAAGTCGGCTTCAGAGGCATGCACAGCACATTGGAG
droSec2 scaffold_11:691079-691332 + TCGGCGGCGTTTTCTGGCTGTGCCCGTCATCTGTCC---------------AAGTC--TCGTCAAGCGTAATCTATCCG---------------------TACATAC-GTGTTTAATCTAATCTCTG--------------------------------------------------------------------------------------CCTGC--GC-------TGCACTT----------C----C----------------------A-TTTCCCAGTATC----TACGCTTTT-TGTTC----GTCCGTAGCTAGTCAGTCTGTTTAT---------------------CTGTTG-GCCATC---------TA-TGT-----------------------AGC--------------TAAATGTGAAACC------------------A-----TC------------GCTTC-GTTTCAGTGCAAAAACTACGCAAAGTCGGCTTCAGAGGCATGCACAGCACATTGGAG
dm3 chr3L:20792039-20792292 + TCGGCGGCGTTTTCTGGCTGTGCCCGTCATCTGTCC---------------AAGTC--TCGTCAAGCGTAATCTATCCG---------------------TACATAC-GTGTTTAATCTAATCTCTC--------------------------------------------------------------------------------------CCGGT--GC-------TGCAATT----------T----C----------------------A-TTTCCCAGTATC----TACGCTTTT-TGTTC----GTCCGTAGCTAGTCAGTCTGTTTAT---------------------CTGTTG-GCCATC---------TA-TGT-----------------------AGC--------------TAAATGTGAAACC------------------A-----TC------------GCTTC-GTTTCAGTGCAAAAACTACGAAAAGTCGGCTTCAGAGGCATGCACAGCACATTGGAG
droEre2 scaffold_4784:20482558-20482804 + TGAGCGGCGGTTTCTGGCTGTGCCCGTCATCTGTCC---------------AAGTC--TCGTCAAGCGTAATCTATCCG---------------------TACATAT-GTGTTTAATCTAATCTCTG--------------------------------------------------------------------------------------CCTGC--GC-------TGCATTT----------C----C----------------------A-TTTCCAAATATC----TACGCTTTT-TGTTC----GTCTGTAGTTAGACAGTCTGGTTAT---------------------CTGTTGGGCCAT-------------------------------------------------------CTAAATGTGAAATC------------------A-----TC------------GCCTC-GTTACAGTGCAAAAACTTCGCAAAGTCGGCTTCAGAGGCATGCACAGCACCGTGGAG
droYak3 3L:19745461-19745708 - TCAGCGGCGGTTTCTGGCTGTGCCCGTCATCTGTCC---------------AAGTC--TCGTCAAGCGTAATCTATCCG---------------------TACATAT-GTGTTTAATCTAATCTCTG--------------------------------------------------------------------------------------CCTGC--GC-------TGCATTT----------A----C----------------------A-TTTCCAAATATC----TACGCTTTTATGTTC----GTCTGTAGTTAGTCAGTGTGCTTAT---------------------CTGTTGGGCCAT-------------------------------------------------------CTAAATGTGAAACC------------------A-----TC------------GCCTC-GTTACAGTGCAAAAACTGCGCAAAGTCGGCTTTAGAGGCATGCACAGCACCTTGGAG
droEug1 scf7180000409711:5202939-5203173 - TCACAGGCGATTTCTGGCTGTGCCC---GTCTGTTC---------------AAGTC--TCGTCAACCGTAATCTATCCG---------------------TACAAAT-GTGTTTAATCTAATCTCTAT-------------------------------------------------------------------------------------CCCAC--GC-------TGCGCTT----------C----C----------------------A-TT----------TATCGTTGCTTTT-TGTTT----GTT---------------------------------GC---CA----TGTTTACCCCT--------------TTT-----GATT--T---T-------------TGTC--AATCTGAATGTCAAAT-------------------A-----TT------------ATCTT-ATTTCAGTGCAAAAACTGCGCAAAGTGGGATTTAGAGGCATGCACAGCACTTTGGAG
droBia1 scf7180000302193:5255948-5256186 - GCGAAGACGATTTCTGGCTGTGCCC---GTCCGTCC---------------AAGTC--TCGTCAACCGTAATCTATCCG---------------------TACATAT-GTGTTTAATCTAATCTCTT------------------------------------------------------------------------------CTCTTCTACCCCC--GC-------TGCATTT----------C----C----------------------A-TT----------CATCGTTGCCTGT-TGCCC----GT------------------------------------TG-------------CCCGCC----------T----TGTTTAGATAGT------------------TGTC--AATCTACATGTGAAATT------------------G-----CT------------ATCTC-GTTTCAGTGCAAAAACTGCGAAAAGTCGGACTGAGAGGCATGCATAGCACACTGGAG
droTak1 scf7180000415420:159118-159378 + TCGAAGACGATTTCTGGCTGTGCCC---GTCCGTCC---------------AAGTC--TCGTCAAGCGTAATCTATCCGT----ACC-------GTACCGTATATAT-GTGTTTAATCTAATCTCTGCCCT-GCTCTTCTCCCCCGGCTACATTACCATGTTCA---------------------------------------------------------------------------------------T----------------------A-TT----------TATCGTTGCTTTT-TGTTT----GC---------------------------------TGCTG-------------C----C----------T----AGTTT-------TGTCATCGA---------------AATCTGAATGTCAAC----------------GGCTG-----TA------------ATCTC-ATTTCAGTGCAAAAACTGCGAAAAGTCGGACTGAGAGGCATGCATAGCACTTTGGAG
droEle1 scf7180000491193:5178321-5178548 + TCGAAGACGATTTCTGGCTGTGCCC---GTCTGTCC---------------AAGTC--TCGTCAACCGTAATCTATCTGT-------------------GTATATTT-GTGTTTAATCTAATCTCTT-----------------------------------------------------------------------------------------GC--CC-------TGCATTT----------C----C----------------------A-TT----------TATCGTTGCTT----GTTTGCCC-----------------------------------TGCTA-------------C----C----------TGTTTT---T-------TTTCG-------------TGTC--AATCTCAATGTCAAACCGA----------------------AT------------ATCTG-ATTTCAGTGCAAAAACTCAGAAAAGTGGGATTGAGAGGCATGCATAGCACATTGGAG
droRho1 scf7180000767651:4361-4582 + TCGAAGACGATTTCTGGCTGTGCCC---GTCTGTCC---------------AAGTC--TCGTCAACCGTAATCTATCTGT-------------------GTATATAT-GTGCTTAATCTAATCTCTT-----------------------------------------------------------------------------------------GT--CC-------TGCATTT----------C----C----------------------A-TT----------TAT---TGCCT----GTTTGCCC-----------------------------------TGCTC-------------C----C----------TGTTTT---T-------T---G-------------TGTC--AAACTCAATGTCAAACCCT----------------------TT------------ATCTC-ATTTCAGTGCAAAAACTGCGAAAAGTCGGCTTGAGAGGCATGCATAGCACTACGGAG
droFic1 scf7180000454065:1293324-1293560 + TCGAAGACGATTTCTGGCTGTGCCC---GTCTGTCA---------------AAGTC--TCGTCAACCGTAATCTATCCG---------------------TACATAT-GTGTTTAATCTAATCTCTA--------------------------------------------------------------------------------------CCCCC--AC-------TGCATTT----------C----C----------------------A-TT----------TATCGTTGTTTTT-TGTTTGCCT-----------------------------------TACTT-------------C----C----------TGC--------------------------------TGTCAGAATCTAAATGTCAAAATCCAT------A-T-CT--GTGT-ATC-----------TCCCTT-ATTACAGTGCAAAAACTGCGCAAAGTCGGCTTTAGAGGCATGCATAGCACTTTGGAG
droKik1 scf7180000301706:6651-6904 + GCAAAGGCGATTTCTGGCTGTGCCC---GTCTGTCC---------------AAGTC--TCGTCATGCGTAATCTATCCA---------------------AGCATAT-GTGTATAATCTAATCTCCT--------------------------------------------------------------------------------------CCTGCTGGC-------GGCTC-GCCATTTGTGTT----C----------------------T-TT----------TATCGTAGCTTGT-TGT----------------------CT-----------------------------TGTTTGCCCGTTCCAGTGTTCCAGTGAC---C-------T----------TTCCGTATGTC--AATCTCACCT-------------------------GTAA-ATCG-----------TTCTC-TTTTTAGTTCAAAAACTCCGAAAAGTCGGCTTGAGAGGCATGCACAGCACTTTAGAA
droAna3 scaffold_13337:11144661-11144908 + GCAGAGACGATTTCTGGCTGTGCCC---GTCTGTCC---------------AAGTC--TCGTCAAGCGTAATCTATCTA---------------------TATATAT-GTGTTTAATCTAATCTCCG--------------------------------------------------------------------------------------CCTC------------TCTCTTT----------C----C-------AACTTGTTCTCCCCCATTT----------GGTCGTTGATTTT-TGTTT----GC---------------T-----------------------------TGTTTTGCCGCC----------T----AATTTCGCGAATT------TTGTATA--------------CATATGTTAATT-------------------T-----TC------------TTCTG-GTTGCAGTTCAAAAACTACGAAAAGTAGGATTCAGAGGCATGCACAGCACTTTGGAG
droBip1 scf7180000396569:242062-242307 - GCAGAGACGATATCTGGCTGTGCCC---GTCTGTCC---------------AAGTC--TCGTCAAGCGTAATCTATC-A---------------------TACATAT-GTGTTTAATCTAATCTCTG--------------------------------------------------------------------------------------CCCCC--GC-------TTC--------------C----C-------AACGTTCTCTCCCCGATTT----------GGTCGTTGATTTT-TGTTT----GC---------------T-----------------------------TGTTTTTCCGCC----------T----TTTTGTGCAAATT------TGGAGTA--------------CATATGTTAAT--------------------T-----TC-----------CCTCTG-ATTGCAGTTCAAAAGCTACGCAAGGTAGGATTCAGAGGCATGCATAGCACTTTGGAG
dp5 XR_group8:8215703-8215968 + ACGAAGACGATTTCTGGCTGTTCCTCCCGTCTGTCA---------------AAGTC--CCGTCAACCGTAATCTATACAT----ACT-----------CGTACATTTAATGTTTAATCTAATCTCTGGGCCC-----------TAAGCTTTTTTGCCATAGTCACTGTGTTTAGTTTTTGTTTTGTTTTCTTGTTGCACCTCTGTTTCCTCTATCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--------------------CG---------------CCATGCCATGTGCTATAA-CCCATTC-----TCCGTCTT-GTTTCAGTTCAGAAACTGCGTAAAGTTGGTCTTAGAGGCATGCATAGCACATTGGAG
droPer2 scaffold_40:407161-407426 + ACGAAGACGATTTCTGGCTGTTCCTCCCGTCTGTCA---------------AAGTC--CCGTCAACCGTAATCTATACAT----ACT-----------CGTACATTTAATGTTTAATCTAATCTCTGGGCCC-----------TAAGCTTTTTTGCCATAGTCACTGTGTTTAGTTTTTGTTTTGTTTGCTTGTTGCACCTCTGTTTCCTCTATCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--------------------CG---------------CCATGCCATGTGCTATAA-CCCATTC-----TCCGTCTT-GTTTCAGTTCAGAAACTGCGTAAAGTTGGTCTTAGAGGCATGCATAGCACATTGGAG
droWil2 scf2_1100000004762:2530495-2530714 - TC-----------------------------TGTTCAAGTCCAAGTCGCAGAAGTC--TCGTCAATTGTAATATATATAT----ATA-----------TGT--ATAT-GTGTAT--------ATGTA--------------------------------------------------------------------------------------TTTGT--GT-------TATAATC----------T---------------------------------------------------------------------TATCTAGTT--------------------TAGTTGATGTTGTTGTTG-GTTAAC---------TG-TAT-----------------------ATC--------------TG---------------TCATAATTT-----GCAATATTGTTTTCTGTTCATTCTTGTTGGCAGTTCAAAAGTTACGCACCGTTGGTTTAAGAGGCATGCATAGCACTTTGGAG
droVir3 scaffold_13049:18553839-18554028 - ---AAGACGGTTTCTGGTTGTCCCG---TTCT---------------------GTC--GCGTCAATTGTAATCTAT------------------------------T-GTCTTTAATCTAATCTATG--------------------------------------------------------------------------------------TTTGA--T-GTGC----------------------------------------------------------------------------------------------------------TTATTTTTTGCAT-G---------------------------------A-CGT-----------------------TGC--------------GCACTCTTAAACCTT--TTTTCAA-T-TT--GCC---TA------------CTCGC-TTTGCAGTGCAAAAGGTGAGGACTGTCGGTTTTAGAGGTATGCATAGCTCACTGGAG
droMoj3 scaffold_6680:12693987-12694197 + A---AAGCGGTGTCTGGTTGTCCC--------GTTA---------------TTGTCTCGCGTCAATTGTAATCTTTTTTTGTCTCCTAATCTAATCAACATAATTAT-CTGTTTAAT---------------------------------------------------------------------------------------------------------GTGCATG-------C---------------------------------AAT--------------------------------CACTT-----------------------------------TAGTTACTAT-------T-GTAATT---------CA-TAT-----------------------ACA--------------TATATGTGTATTT---------AT-------T-----TA------------ATTTT-TTCGCAGTACAAAAATTGAGAACAGTTGGATTAAGAGGCATGCATAGCTCTTTGGAA
droGri2 scaffold_15110:15625687-15625926 + A---AAGCGGTTTCTGGGTGTCCAA---AACT---------------------GTC--ACGTCAATTGTAATCTATGCC---------------------TAT--TA-TTCTTTAATCTTATCTGTT----------------------------------------------------------------------------------------TGA--T-GTGCTTG-------CTGTTGCTGTTTTTTTTCTTTCAATCTT----------A-TT----------TATATTTGCAT----GTCGCTGC-----------------------------------AGCTG-------------C----C----------ATTGTT---T-------TTTAATTTA---------------ATTATTATTATTTAT------------------------------AT-----TTTTAATT-GTTGCAGTACAAAAGCTTCGAACAATTGGCGTTAGAGGCATGCATAGCTCACTGGAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TCGGCGGCGTTTTCTGGCTGTGCCCGTCATCTGTCC---------------AAGTC--TCGTCAAGCGTAATCTATCCG---------------------TACATAC-GTGTTTAATCTAATCTCTG--------------------------------------------------------------------------------------CCTGC--GC-------TGCACTT----------C----C----------------------A-TTTCCCAGTATC----TACGCTTTT-TGTGC----GTCCGTAGCTAGTCAGTCTGTTTAT---------------------CTGTTG-GCCATC---------TA-TGT-----------------------AGC--------------TAAATGTGAAACC------------------A-----TC------------GCTTC-GTTTCAGTGCAAAAACTACGCAAAGTCGGCTTCAGAGGCATGCACAGCACATTGGAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGCAAAGTCGGCTTCAGAGGCA.................2413.00300000001200000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGCAAAGTCGGCTTCAGAGGCATG...............2613.00300000010000020000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGCAAAGTCGGCTTCAGAGGCATGCAC............2912.00200010000000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAAAACTACGCAAAGTCGGCTTC........................2612.00200000000000020000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACGCAAAGTCGGCTTCAGAGGCA.................2611.00100000000000010000
..............................CTGTCC---------------AAGTC--TCGTCAAGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGCTTCAGAGGCATGCACAGCACA......2611.00100000000000001000
...............................................................................................................................................................................................................................................................................................................................................................................ATC---------TA-TGT-----------------------AGC--------------TAAATGTGAAACC------------------A-----T............................................................................2611.00110000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGAGGCATGCACAGCACATTGGA.2611.00100000000010000000
..GGCGGCGTTTTCTGGCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
................................................................................................................................................................................................................................................................................................................TGC----GTCCGTAGCTAGTCAGTC..................................................................................................................................................................................................................2111.00100001000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAACTACGCAAAGTCGGC...........................2011.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAACTACGCAAAGTCGGCT..........................2111.00100000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTCGGCTTCAGAGGC..................1811.00101000000000000000
.........................................................................................................................................................................................................................................................................................................................................TGTTTAT---------------------CTGTTG-GCCATC---------TA-TGT-----------------------AG.................................................................................................................................2611.00101000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATGTGAAACC------------------A-----TC------------GCT............................................................1911.00100000000001000000
.........TTTTCTGGCTGTGCCCGTCATCTGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTACGCAAAGTCGGCTTCAGAGGCA.................2711.00100000001000000000
droSec2
TCGGCGGCGTTTTCTGGCTGTGCCCGTCATCTGTCC---------------AAGTC--TCGTCAAGCGTAATCTATCCG---------------------TACATAC-GTGTTTAATCTAATCTCTG--------------------------------------------------------------------------------------CCTGC--GC-------TGCACTT----------C----C----------------------A-TTTCCCAGTATC----TACGCTTTT-TGTTC----GTCCGTAGCTAGTCAGTCTGTTTAT---------------------CTGTTG-GCCATC---------TA-TGT-----------------------AGC--------------TAAATGTGAAACC------------------A-----TC------------GCTTC-GTTTCAGTGCAAAAACTACGCAAAGTCGGCTTCAGAGGCATGCACAGCACATTGGAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAGTCGGCTTCAGAGGCATGC..............2411.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGCAAAGTCGGCTTCAG......................2011.0010100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGCAAAGTCGGCTTCAGAGG...................2311.0011000
.CGGCGGCGTTTTCTGGCTGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGCAAAGTCGGCTTCAGAGG...................2211.0010100
...............................TGTCC---------------AAGTC--TCGTCAAGCGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
.........................GTCATCTGTCC---------------AAGTC--TCGTCAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGCAAAGTCGGCTTC........................1811.0011000
............................................................................................................................................................................................................................................................................................................................................................................................A-TGT-----------------------AGC--------------TAAATGTGAAACC------------------A-----T............................................................................2211.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAGTCGGCTTCAGAGGC..................2011.0010010
dm3
TCGGCGGCGTTTTCTGGCTGTGCCCGTCATCTGTCC---------------AAGTC--TCGTCAAGCGTAATCTATCCG---------------------TACATAC-GTGTTTAATCTAATCTCTC--------------------------------------------------------------------------------------CCGGT--GC-------TGCAATT----------T----C----------------------A-TTTCCCAGTATC----TACGCTTTT-TGTTC----GTCCGTAGCTAGTCAGTCTGTTTAT---------------------CTGTTG-GCCATC---------TA-TGT-----------------------AGC--------------TAAATGTGAAACC------------------A-----TC------------GCTTC-GTTTCAGTGCAAAAACTACGAAAAGTCGGCTTCAGAGGCATGCACAGCACATTGGAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAACTACGAAAAGTCGGCTTC........................2318.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAAAAGTCGGCTTCAGAGGC..................2216.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTACGAAAAGTCGGCTTCAGAGGCA.................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGAAAAGTCGGCTTCAGAGGCA.................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTCGGCTTCAGAGGCATGCA.............2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACGAAAAGTCGGCTTCAGAGGCA.................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAAAGTCGGCTTCAGAGGCATGC..............2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
............................ATCTGTCC---------------AAGTC--TCGTCAAGCGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAACTACGAAAAGTCGGCTT.........................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TTTT-TGTTC----GTCCGTAGCTAGT.......................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGCTTCAGAGGCATGCACAGCAC.......2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTCGGCTTCAGAGGCA.................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCTTCAGAGGCATGCACAG..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACGAAAAGTCGGCTTCAGAGG...................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAAAGTCGGCTTCAGAGGCATG...............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TCC---------------AAGTC--TCGTCAAGCGTAATCTATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGCATGCACAGCACATT....2011.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAACTACGAAAAGTCGGCTTCAGA.....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TCAGTCTGTTTAT---------------------CTGTTG-GCCATC---------................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTTCAGAGGCATGCACAGC.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................TTC----GTCCGTAGCTAGTCAGTCTT................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTCGGCTTCAGAGGCATGC..............2311.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAGTCGGCTTCAGAGG...................1911.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGAAAAGTCGGCTTCAGAGG...................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TCAAGCGTAATCTATCCG---------------------TAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAGTCGGCTTCAGAGGCATGC..............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTACGAAAAGTCGGCTTC........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TCC---------------AAGTC--TCGTCAAGCGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAACTACGAAAAGTCGGCT..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTCGGCTTCAGAGGCATG...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGGCTTCAGAGGCATGC..............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTCGGCTTCAGAGGCATG...............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGAAAAGTCGGCTTCAGAGGCAT................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACGAAAAGTCGGCTTCAGAGGCATG...............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGCTTCAGAGGCATGCACA...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTCGGCTTCAGAGG...................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAAAAGTCGGCTTCAGAGGCAT................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CGTTTTCTGGCTGTGCCCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGAAAAGTCGGCTTCAGAGGCATG...............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAGTCGGCTTCAGAGGCA.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCTTCAGAGGCATGCACAGCACA......2511.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAAAAGTCGGCTTCAGA.....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAAAAGTCGGCTTCAGAGG...................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTCGGCTTCAGAGGCATGCACAGCAC.......2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................ATC---------TA-TGT-----------------------AGC--------------TAAATGTGAA........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
...................GTGCCCGTCATCTGTCC---------------AAGTC--TCGTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................ATCTAATCTCTC--------------------------------------------------------------------------------------CCGGT--GC-------TG....................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
....................................................................................................................................................................................................................................................................................................TACGCTTTT-TGTTC----GTCCGTAGCTATG.......................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................TC----GTCCGTAGCTAGTCAGTCTGTTTAT---------------------C.....................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTACGAAAAGTCGGCTTCAGAGG...................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................TTTAATCTAATCTCTC--------------------------------------------------------------------------------------CCGGT--GC-------TGC...................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTCGGCTTCAGAGGCATGCACA...........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCGGCTTCAGAGGCATGCACAGCA........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................GTTTAT---------------------CTGTTG-GCCATC---------TA-TGT-----------------------AG.................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTCGGCTTCAGAGGCATGCAC............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCGGCTTCAGAGGCATC...............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGAAAAGTCGGCTTCAGAGGCATGCA.............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACGAAAAGTCGGCTTCAGAGGCAT................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................GTCAAGCGTAATCTATCCG---------------------TAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAAAGTCGGCTTCAGAGGCATT...............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAAAAGTCGGCTTCAGAGGCATGC..............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TT----------T----C----------------------A-TTTCCCAGTATC----.......................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTCGGCTTCAGAGGCG.................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TCAGTCTGTTTAT---------------------CTGTAC-T..............................................................................................................................................................................20170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TGAGCGGCGGTTTCTGGCTGTGCCCGTCATCTGTCC---------------AAGTC--TCGTCAAGCGTAATCTATCCG---------------------TACATAT-GTGTTTAATCTAATCTCTG--------------------------------------------------------------------------------------CCTGC--GC-------TGCATTT----------C----C----------------------A-TTTCCAAATATC----TACGCTTTT-TGTTC----GTCTGTAGTTAGACAGTCTGGTTAT---------------------CTGTTGGGCCAT-------------------------------------------------------CTAAATGTGAAATC------------------A-----TC------------GCCTC-GTTACAGTGCAAAAACTTCGCAAAGTCGGCTTCAGAGGCATGCACAGCACCGTGGAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAACTTCGCAAAGTCGGCTTC........................2311.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................CAT-------------------------------------------------------CTAAATGTGAAATC------------------A-----TC------------GCCT...........................................................2411.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAAACTTCGCAAAGTCGG............................2111.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCGGCTTCAGAGGCATGCACAGCACC......2811.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGAGGCATGCACAGCACCGTGGAG2611.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGGCTTCAGAGGCATGCACA...........2211.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGCAAAGTCGGCTTCAGAGGCA.................2411.0011000000
............................ATCTGTCC---------------AAGTC--TCGTCAAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
............................ATCTGTCC---------------AAGTC--TCGTCAAGCTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
droYak3
TCAGCGGCGGTTTCTGGCTGTGCCCGTCATCTGTCC---------------AAGTC--TCGTCAAGCGTAATCTATCCG---------------------TACATAT-GTGTTTAATCTAATCTCTG--------------------------------------------------------------------------------------CCTGC--GC-------TGCATTT----------A----C----------------------A-TTTCCAAATATC----TACGCTTTTATGTTC----GTCTGTAGTTAGTCAGTGTGCTTAT---------------------CTGTTGGGCCAT-------------------------------------------------------CTAAATGTGAAACC------------------A-----TC------------GCCTC-GTTACAGTGCAAAAACTGCGCAAAGTCGGCTTTAGAGGCATGCACAGCACCTTGGAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAGTCGGCTTTAGAGGC..................2021.00200000020000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTGCGCAAAGTCGGCTTTAGAGGCAT................3021.00200000000002
................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACC------------------A-----TC------------GCCTC-GTTACAGTGC...............................................2420.50101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAGTCGGCTTTAGAGG...................1920.50101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCGGCTTTAGAGGCATGC..............2020.50101000000000
.................................................................................................................................................................................................................................................................................................................TC----GTCTGTAGTTAGTCAGTGTGCTTAT---------------------CT....................................................................................................................................................................................2920.50100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGCTTTAGAGGCATGCACAGCACC......2620.50100100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGCTTTAGAGGCATGCACAGCACCT.....2720.50101000000000
droEug1
TCACAGGCGATTTCTGGCTGTGCCC---GTCTGTTC---------------AAGTC--TCGTCAACCGTAATCTATCCG---------------------TACAAAT-GTGTTTAATCTAATCTCTAT-------------------------------------------------------------------------------------CCCAC--GC-------TGCGCTT----------C----C----------------------A-TT----------TATCGTTGCTTTT-TGTTT----GTT---------------------------------GC---CA----TGTTTACCCCT--------------TTT-----GATT--T---T-------------TGTC--AATCTGAATGTCAAAT-------------------A-----TT------------ATCTT-ATTTCAGTGCAAAAACTGCGCAAAGTGGGATTTAGAGGCATGCACAGCACTTTGGAGSizeHit CountTotal NormTotal
No Reads
droBia1
GCGAAGACGATTTCTGGCTGTGCCC---GTCCGTCC---------------AAGTC--TCGTCAACCGTAATCTATCCG---------------------TACATAT-GTGTTTAATCTAATCTCTT------------------------------------------------------------------------------CTCTTCTACCCCC--GC-------TGCATTT----------C----C----------------------A-TT----------CATCGTTGCCTGT-TGCCC----GT------------------------------------TG-------------CCCGCC----------T----TGTTTAGATAGT------------------TGTC--AATCTACATGTGAAATT------------------G-----CT------------ATCTC-GTTTCAGTGCAAAAACTGCGAAAAGTCGGACTGAGAGGCATGCATAGCACACTGGAGSizeHit CountTotal NormTotal
No Reads
droTak1
TCGAAGACGATTTCTGGCTGTGCCC---GTCCGTCC---------------AAGTC--TCGTCAAGCGTAATCTATCCGT----ACC-------GTACCGTATATAT-GTGTTTAATCTAATCTCTGCCCT-GCTCTTCTCCCCCGGCTACATTACCATGTTCA---------------------------------------------------------------------------------------T----------------------A-TT----------TATCGTTGCTTTT-TGTTT----GC---------------------------------TGCTG-------------C----C----------T----AGTTT-------TGTCATCGA---------------AATCTGAATGTCAAC----------------GGCTG-----TA------------ATCTC-ATTTCAGTGCAAAAACTGCGAAAAGTCGGACTGAGAGGCATGCATAGCACTTTGGAGSizeHit CountTotal NormTotal
No Reads
droEle1
TCGAAGACGATTTCTGGCTGTGCCC---GTCTGTCC---------------AAGTC--TCGTCAACCGTAATCTATCTGT-------------------GTATATTT-GTGTTTAATCTAATCTCTT-----------------------------------------------------------------------------------------GC--CC-------TGCATTT----------C----C----------------------A-TT----------TATCGTTGCTT----GTTTGCCC-----------------------------------TGCTA-------------C----C----------TGTTTT---T-------TTTCG-------------TGTC--AATCTCAATGTCAAACCGA----------------------AT------------ATCTG-ATTTCAGTGCAAAAACTCAGAAAAGTGGGATTGAGAGGCATGCATAGCACATTGGAGSizeHit CountTotal NormTotal
No Reads
droRho1
TCGAAGACGATTTCTGGCTGTGCCC---GTCTGTCC---------------AAGTC--TCGTCAACCGTAATCTATCTGT-------------------GTATATAT-GTGCTTAATCTAATCTCTT-----------------------------------------------------------------------------------------GT--CC-------TGCATTT----------C----C----------------------A-TT----------TAT---TGCCT----GTTTGCCC-----------------------------------TGCTC-------------C----C----------TGTTTT---T-------T---G-------------TGTC--AAACTCAATGTCAAACCCT----------------------TT------------ATCTC-ATTTCAGTGCAAAAACTGCGAAAAGTCGGCTTGAGAGGCATGCATAGCACTACGGAGSizeHit CountTotal NormTotal
No Reads
droFic1
TCGAAGACGATTTCTGGCTGTGCCC---GTCTGTCA---------------AAGTC--TCGTCAACCGTAATCTATCCG---------------------TACATAT-GTGTTTAATCTAATCTCTA--------------------------------------------------------------------------------------CCCCC--AC-------TGCATTT----------C----C----------------------A-TT----------TATCGTTGTTTTT-TGTTTGCCT-----------------------------------TACTT-------------C----C----------TGC--------------------------------TGTCAGAATCTAAATGTCAAAATCCAT------A-T-CT--GTGT-ATC-----------TCCCTT-ATTACAGTGCAAAAACTGCGCAAAGTCGGCTTTAGAGGCATGCATAGCACTTTGGAGSizeHit CountTotal NormTotal
No Reads
droKik1
GCAAAGGCGATTTCTGGCTGTGCCC---GTCTGTCC---------------AAGTC--TCGTCATGCGTAATCTATCCA---------------------AGCATAT-GTGTATAATCTAATCTCCT--------------------------------------------------------------------------------------CCTGCTGGC-------GGCTC-GCCATTTGTGTT----C----------------------T-TT----------TATCGTAGCTTGT-TGT----------------------CT-----------------------------TGTTTGCCCGTTCCAGTGTTCCAGTGAC---C-------T----------TTCCGTATGTC--AATCTCACCT-------------------------GTAA-ATCG-----------TTCTC-TTTTTAGTTCAAAAACTCCGAAAAGTCGGCTTGAGAGGCATGCACAGCACTTTAGAASizeHit CountTotal NormTotal
No Reads
droAna3
GCAGAGACGATTTCTGGCTGTGCCC---GTCTGTCC---------------AAGTC--TCGTCAAGCGTAATCTATCTA---------------------TATATAT-GTGTTTAATCTAATCTCCG--------------------------------------------------------------------------------------CCTC------------TCTCTTT----------C----C-------AACTTGTTCTCCCCCATTT----------GGTCGTTGATTTT-TGTTT----GC---------------T-----------------------------TGTTTTGCCGCC----------T----AATTTCGCGAATT------TTGTATA--------------CATATGTTAATT-------------------T-----TC------------TTCTG-GTTGCAGTTCAAAAACTACGAAAAGTAGGATTCAGAGGCATGCACAGCACTTTGGAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGATTCAGAGGCATGCACAGCACT......2611.001100000
.......................................................................................................................................................................................................................................................................................................................................................................GTTTTGCCGCC----------T----AATTTCGC..................................................................................................................................................2011.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATTCAGAGGCATGCACA...........2011.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAAAAGTAGGATTCAGAGGC..................2211.001000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATGCACAGCACTTTGGA.2011.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTAGGATTCAGAGGCATGCACAGCA........2611.001010000
.....GACGATTTCTGGCTGTGCCC---...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
droBip1
GCAGAGACGATATCTGGCTGTGCCC---GTCTGTCC---------------AAGTC--TCGTCAAGCGTAATCTATC-A---------------------TACATAT-GTGTTTAATCTAATCTCTG--------------------------------------------------------------------------------------CCCCC--GC-------TTC--------------C----C-------AACGTTCTCTCCCCGATTT----------GGTCGTTGATTTT-TGTTT----GC---------------T-----------------------------TGTTTTTCCGCC----------T----TTTTGTGCAAATT------TGGAGTA--------------CATATGTTAAT--------------------T-----TC-----------CCTCTG-ATTGCAGTTCAAAAGCTACGCAAGGTAGGATTCAGAGGCATGCATAGCACTTTGGAGSizeHit CountTotal NormTotal
No Reads
dp5
ACGAAGACGATTTCTGGCTGTTCCTCCCGTCTGTCA---------------AAGTC--CCGTCAACCGTAATCTATACAT----ACT-----------CGTACATTTAATGTTTAATCTAATCTCTGGGCCC-----------TAAGCTTTTTTGCCATAGTCACTGTGTTTAGTTTTTGTTTTGTTTTCTTGTTGCACCTCTGTTTCCTCTATCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--------------------CG---------------CCATGCCATGTGCTATAA-CCCATTC-----TCCGTCTT-GTTTCAGTTCAGAAACTGCGTAAAGTTGGTCTTAGAGGCATGCATAGCACATTGGAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTAAAGTTGGTCTTAGAGGCATGC..............2712.0020000000200
....AGACGATTTCTGGCTGTTCCTCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGTTGGTCTTAGAGGCATGCA.............2411.0010000000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTTGGTCTTAGAGGCATG...............2111.0010000000010
....AGACGATTTCTGGCTGTTCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTAAAGTTGGTCTTAGAGGC..................2311.0010000000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTCTTAGAGGCATGCA.............1911.0010000000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTAAAGTTGGTCTTAGAGGCATGC..............2611.0010000000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTTGGTCTTAGAGGCATGCA.............2311.0010000000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAGTTGGTCTTAGAGGCATGCATA...........2711.0010000000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCAGAAACTGCGTAAAGTT..............................2111.0010100000000
droPer2
ACGAAGACGATTTCTGGCTGTTCCTCCCGTCTGTCA---------------AAGTC--CCGTCAACCGTAATCTATACAT----ACT-----------CGTACATTTAATGTTTAATCTAATCTCTGGGCCC-----------TAAGCTTTTTTGCCATAGTCACTGTGTTTAGTTTTTGTTTTGTTTGCTTGTTGCACCTCTGTTTCCTCTATCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--------------------CG---------------CCATGCCATGTGCTATAA-CCCATTC-----TCCGTCTT-GTTTCAGTTCAGAAACTGCGTAAAGTTGGTCTTAGAGGCATGCATAGCACATTGGAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........ATTTCTGGCTGTTCCTCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.003300000
........GATTTCTGGCTGTTCCTCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.003300000
.....GACGATTTCTGGCTGTTCCTCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002200000
.........ATTTCTGGCTGTTCCTCCCGTCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002200000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAGTTGGTCTTAGAG....................1812.002200000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTTCAGAAACTGCGTAAAGTTGGTC..........................2711.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTAAAGTTGGTCTTAGAGG...................2211.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAA-CCCATTC-----TCCGTCTT-GTT......................................................2211.001100000
droWil2
TC-----------------------------TGTTCAAGTCCAAGTCGCAGAAGTC--TCGTCAATTGTAATATATATAT----ATA-----------TGT--ATAT-GTGTAT--------ATGTA--------------------------------------------------------------------------------------TTTGT--GT-------TATAATC----------T---------------------------------------------------------------------TATCTAGTT--------------------TAGTTGATGTTGTTGTTG-GTTAAC---------TG-TAT-----------------------ATC--------------TG---------------TCATAATTT-----GCAATATTGTTTTCTGTTCATTCTTGTTGGCAGTTCAAAAGTTACGCACCGTTGGTTTAAGAGGCATGCATAGCACTTTGGAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTTACGCACCGTTGGTTTAAG......................2311.00100100
.........................................CAAGTCGCAGAAGTC--TCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGCACCGTTGGTTTAAGAGGC..................2311.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGTTCAAAAGTTACGCACCG................................2311.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACGCACCGTTGGTTTAAGAGG...................2411.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGTTGGTTTAAGAGGCA.................1911.00100010
....................................................................................................................................................................................................................................................................................................................................T--------------------TAGTTGATGTTGTTGTTG-...............................................................................................................................................................................1950.20101000
droVir3
---AAGACGGTTTCTGGTTGTCCCG---TTCT---------------------GTC--GCGTCAATTGTAATCTAT------------------------------T-GTCTTTAATCTAATCTATG--------------------------------------------------------------------------------------TTTGA--T-GTGC----------------------------------------------------------------------------------------------------------TTATTTTTTGCAT-G---------------------------------A-CGT-----------------------TGC--------------GCACTCTTAAACCTT--TTTTCAA-T-TT--GCC---TA------------CTCGC-TTTGCAGTGCAAAAGGTGAGGACTGTCGGTTTTAGAGGTATGCATAGCTCACTGGAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAGGTGAGGACTGTCGGT...........................2112.002001000000000000000000000000000000000010000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGAGGTATGCATAGCTCACT....2212.002001000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................T-GTGC----------------------------------------------------------------------------------------------------------TTATTTTTTGCAT-G---------------------------------A-CGT-----------------------TGC--------------..................................................................................................................2611.001000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGAGGTATGCATAGCTCACTGG..2411.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAGAGGTATGCATAGCTC.......2111.001000000000000000000000000100000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGTGAGGACTGTCGG............................1811.001000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-T-TT--GCC---TA------------CTCGC-TTTGCAGTGCAA.............................................2711.001001000000000000000000000000000000000000000000000000000000000000
...............................T---------------------GTC--GCGTCAATTGTAATCTAT------------------------------T-GTCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACTGTCGGTTTTAGAGGTATGC..............2411.001000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCATAGCTCACTGGAG1811.001000000000000001000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAGGTGAGGACTGTCGGTT..........................2211.001000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................................................................................................................................................................TGCAT-G---------------------------------A-CGT-----------------------TGC--------------GCACTCTTAAACCT....................................................................................................2711.001000000000000000000000000100000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGTGAGGACTGTCGGT...........................1911.001000000000000000000000010000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGCATAGCTCACTGGAG1911.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................TTGA--T-GTGC----------------------------------------------------------------------------------------------------------TTATTTTTTGCAT-G---------------------------------A-CGT-----------------------...................................................................................................................................2711.001000000000000000000000000000000010000000000000000000000000000000
droMoj3
A---AAGCGGTGTCTGGTTGTCCC--------GTTA---------------TTGTCTCGCGTCAATTGTAATCTTTTTTTGTCTCCTAATCTAATCAACATAATTAT-CTGTTTAAT---------------------------------------------------------------------------------------------------------GTGCATG-------C---------------------------------AAT--------------------------------CACTT-----------------------------------TAGTTACTAT-------T-GTAATT---------CA-TAT-----------------------ACA--------------TATATGTGTATTT---------AT-------T-----TA------------ATTTT-TTCGCAGTACAAAAATTGAGAACAGTTGGATTAAGAGGCATGCATAGCTCTTTGGAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAGAACAGTTGGATT.........................1811.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGTTGGATTAAGAGGC..................1911.001100000
droGri2
A---AAGCGGTTTCTGGGTGTCCAA---AACT---------------------GTC--ACGTCAATTGTAATCTATGCC---------------------TAT--TA-TTCTTTAATCTTATCTGTT----------------------------------------------------------------------------------------TGA--T-GTGCTTG-------CTGTTGCTGTTTTTTTTCTTTCAATCTT----------A-TT----------TATATTTGCAT----GTCGCTGC-----------------------------------AGCTG-------------C----C----------ATTGTT---T-------TTTAATTTA---------------ATTATTATTATTTAT------------------------------AT-----TTTTAATT-GTTGCAGTACAAAAGCTTCGAACAATTGGCGTTAGAGGCATGCATAGCTCACTGGAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
A---AAGCGGTTTCTGGGTGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGAACAATTGGCGTTAGAG....................2111.00110
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGCGTTAGAGGCATGCATAGCTC.......2611.00101
A---AAGCGGTTTCTGGGTGTCCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGCTTCGAACAATTGGCG..........................2111.00110
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAGCTTCGAACAATTGGCGTT........................2411.00101

Generated: 05/19/2015 at 01:36 AM