dsi_22493

CDS [3r_6210854_6210870_+]; five_prime_UTR [3r_6210815_6210853_+]; exon [3r_6210815_6210870_+]; intron [3r_6210399_6210814_+]

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## GGCGCAGCGATTTGGCAGCGACACAGAATCACCAAAGTGTTTTTTGGCAGATATATAAATTAAATATAGAAAGTGCGTGCGAAGGTTAAGCGTCGAGTGCAAGTGCATTTACGTTTGGAAATAATAAATGCTACAATTTAGTTGAAATTCGCCAGCGAATTCGCATTAAATCTAATTCTGTATTTTGTACTCTCTCGCAGCGAATCAAGCAGGAAAATACCGGATAATAATTGGCAAAGATGCAGATCAA ************************************************...........((((((((((((...(((((((..((((((((.((((((....))))))))))))))......(((((......)))))((((........))))...))))))).....))..))))))))))...............************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M053 female body	SRR553485 Chicharo_3 day-old ovaries	SRR553488 RT_0-2 hours eggs	SRR553487 NRT_0-2 hours eggs	SRR553486 Makindu_3 day-old ovaries
......................................GTTTTTTGGCAGATATATAAATTAAAT.........................................................................................................................................................................................	27	0	1	1.00	1	1	0	0	0	0
..............................................................................................................................................................................................................................GATAATAATTGGCAAAGATGCAG.....	23	0	1	1.00	1	1	0	0	0	0
.........................................................................................................................................................................................................................TACCGGATAATAATTGGCAAAGATGCAGA....	29	0	1	1.00	1	0	1	0	0	0
.........................................................................................................................................................................................................GAGTCAAGCAGGAAAATACCGGATAAT......................	27	1	1	1.00	1	1	0	0	0	0
..........................................................................................................................................................................................GTACTCTCTCGCAGCGAGTCAAGCAGG.....................................	27	1	1	1.00	1	1	0	0	0	0
..........................................................................................................................................................................................................AATAAAGCAGGAAAATACCGGAT.........................	23	1	1	1.00	1	1	0	0	0	0
................................................................................................................................TGCTACCATTTAGTTGA.........................................................................................................	17	1	2	0.50	1	0	0	1	0	0
.................................................................................................................................GCTACCATTTAGTTGA.........................................................................................................	16	1	7	0.43	3	0	0	3	0	0
.....................CACAGAATCAGCAAAG.....................................................................................................................................................................................................................	16	1	4	0.25	1	0	0	0	1	0
........................................................................................................................................................................................................................ATACCGGATAATATT...................	15	1	8	0.13	1	0	0	0	0	1

CCGCGTCGCTAAACCGTCGCTGTGTCTTAGTGGTTTCACAAAAAACCGTCTATATATTTAATTTATATCTTTCACGCACGCTTCCAATTCGCAGCTCACGTTCACGTAAATGCAAACCTTTATTATTTACGATGTTAAATCAACTTTAAGCGGTCGCTTAAGCGTAATTTAGATTAAGACATAAAACATGAGAGAGCGTCGCTTAGTTCGTCCTTTTATGGCCTATTATTAACCGTTTCTACGTCTAGTT ************************************************...........((((((((((((...(((((((..((((((((.((((((....))))))))))))))......(((((......)))))((((........))))...))))))).....))..))))))))))...............************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR618934 dsim w501 ovaries	SRR553487 NRT_0-2 hours eggs	SRR553485 Chicharo_3 day-old ovaries	SRR553486 Makindu_3 day-old ovaries
...................................................................................................................................................AAGCGGTCGCTTAAGC.......................................................................................	16	0	1	1.00	1	1	0	0	0
....................................................................................................................................................AGCGGTCGCTTAAGC.......................................................................................	15	0	1	1.00	1	1	0	0	0
....................................................................................................................................................TGCGGTCGCTTAAGCGGAAT..................................................................................	20	2	1	1.00	1	1	0	0	0
................................................................................................................CAATCCGTTATTATTTAAGATGT...................................................................................................................	23	3	2	0.50	1	0	1	0	0
.............................................................TTTAAATCTTTCACGCTGGCT........................................................................................................................................................................	21	3	5	0.20	1	0	0	1	0
....................TGTGTCTGACTGGTTCCACA..................................................................................................................................................................................................................	20	3	7	0.14	1	1	0	0	0
........................TCTAAGTGGTTTCAGAAA................................................................................................................................................................................................................	18	2	7	0.14	1	0	0	0	1

Species	Coordinate	ID	Alignment
droSim2	3r:6210615-6210864 +	dsi_22493	GG-CGC-----------AGC-------GA--TTTGGCAGCGACAC----------------------------AGAA-----------------------------------------------------------------------------------TCACCA---AAGTGTTTTTT---GGCAGATA-----------------TATAAATTAAATATAGAA----AGTGCG--TGCGAAGGTTAAGCG-----TCGAGTGCAAGTGCATTT--------------------ACGTTTGGAAATAATAAA----TGCT--ACAA------------------TTTAGT------TGA--AAT------------------------------------------------TCGC------CAGCG-----AA----TTCGCAT-TAAATCTAATTCTGTATTTTGTA----------------------------------------------------CTCT-------CTCGCAGCG---------------AA-TCAAGCAGGAA--------------------AATACCGGA----TAAT-AATT-GGCAAAGATGCAGATCAA
droSec2	scaffold_25:713947-714196 +		GG-CGC-----------AGC-------GA--TTTGGCAGCGAAAC----------------------------AGAA-----------------------------------------------------------------------------------ACACCA---AAGTGTTTTTT---GGCAGATA-----------------TATAAATTAAATATAGAA----AGTGCG--TGCGAAGGTTAAGCG-----TCGAGTGCAAGTGCATTT--------------------ACATTTGGAAATAATAAA----TGCT--ACAA------------------TTTAGT------TGA--AAT------------------------------------------------CCGC------CAGCG-----AA----TTCGCAT-TAAATCTAATTCTGTATTTTGTA----------------------------------------------------CTCT-------CTCGCAGCG---------------AA-TCAAGCAGGAA--------------------AATACCGGA----TAAT-AATT-GGCAAAGATGCAGATCAA
dm3	chr3R:15051743-15051995 -		GG-CGC-----------AGC-------GA--TTTGGCAGCGAAAC----------------------------AAAA-----------------------------------------------------------------------------------ACACCA---AAGTGTTA-TT---GGCAGATATATA-------------TGTAAATTAAATATAGAA----AGTGCG--TGCGAAGGTTAAGCG-----TAGAGTGCAAGTGCATTT--------------------ATATTTGGAAATAATAAA----TGCT--ACAA------------------TTTAGT------TGA--AAT------------------------------------------------CCGC------CAGCG-----AA----TTCGCAT-TAAATCTAATTCTGTATTTTGTA----------------------------------------------------CTCT-------CTCGCAGCG---------------AA-TCAAGCAGGAA--------------------AATACCGGA----TAAT-AATT-GGCAAAGATGCAGATCAA
droEre2	scaffold_4770:6580113-6580360 +		GG-TGC-----------AGT-------TT-TTTTGGCAGCGAATC----------------------------AGAA-----------------------------------------------------------------------------------ACACC-----AGTGTTT-TT---GGCAGATA-----------------TATAAATTAAATATAGAA----AGTGCG--TGCGAAGGTTAAGCG-----TCGAGTGCAAGTGCATTT--------------------ACATTTGGAAATAATAAA----TTCT--GCAA------------------TTTAGT------TGA--AAT------------------------------------------------CCGC------CAGCG-----AA----TTCGCAT-TAAATCTAATTCTGTATTTTGTA----------------------------------------------------CTCT-------CTCGCAGCG---------------AA-TCAAGCAGGAA--------------------AATACCGGA----TAAT-AATT-GGCAAAGATGCAGATCAA
droYak3	3R:3753206-3753455 -		GG-TGC-----------AAC-------TT-TTTTGGCAGCGAATC----------------------------CAAA-----------------------------------------------------------------------------------ACACCG---AAGTGTTT-TT---TGCAGATA-----------------TATAAATTAAATATAGAA----AGTGCG--TGCGAAGGTTAAGCG-----TCGAGTGCAAGTGCATTT--------------------ACATTTGGAAATAATAAA----TTCT--ACAA------------------TTTAGT------TGA--AAT------------------------------------------------CCGT------CAGCA-----AA----ATCGCAT-TAAATCTAATTCTGTATTTTGTA----------------------------------------------------CTCT-------CTCGCAGCG---------------AA-TCAAGCAGGAA--------------------AATACCGGA----TAAT-AATT-GGCAAAGATGCAGATCAA
droEug1	scf7180000409804:1314632-1314907 -		AAGTGC-----------AGT-------CT-TTTTGGCAATGAAACAA-----------------------------G-----------------------------------------------------------------------------------GCACTC---TGGTGGTT-TTTTTCGCACATA-----------------TATAAATTAAATTTAGAA----AGTGCGTGTGCGAAGGTTAAGCG-----TCGAGTGCAAGTGCATTA-------------------AACATTTGGAAAGAATAGA----TT-T--AC-----ATACATATATGTATGTACATATGTTACTAACAAAA------------------------------------------------TAGT------CAGCA-----AA----ATCGCAT-TAAATCTAATTTTGTATTTTATA----------------------------------------------------CTCT-------CTCGCAGCG---------------AA-TCAAGCAGGAA--------------------AATACCGGA----TAAT-AATT-GGCAAAGATGCAGATCAA
droBia1	scf7180000302402:812002-812267 -		GG-TGC-----------AGC-------GCTTTTTGGCAGCGAAGC----------------------------AGAA-----------------------------------------------------------------------------------GCACCT---CGGTGGTT-TT---GGCAGATA-----------------TCTAAATTAAATATAGAA----AGTGCG--TGCGAAGGTTAAGCGT--CGTCGGGTCCGAGTGCATTT--------------------ACGTTTGGAAATAATAAG----TTAT--ACACTGCGTACATACAAGCGTG------------TAC--AAT------------------------------------------------ACGC------CAGCG-----AA----TTCGCAT-TAAATCTAATTTTGTATTTTGTA----------------------------------------------------CTCT-------CTCGCAGCG---------------AC-TCAAGCAGGAA--------------------AATACCGGA----TAGC-AATT-GGCAAAGATGCAGATCAA
droTak1	scf7180000410451:72936-73192 -		AG-TGC-----------AGC-------GA--TTTGGCAGC-AGACAG--------------------------AGAA-----------------------------------------------------------------------------------ACACCT---CAGTGGTT-TT---GGCAGATA-----------------TTTAAGTTAAATATAGAA----AGTGCG--TGCGAAGGTTAAGCG-----TCGAGTGCAAGTGCATTT--------------------ACATTTGGAAATAATAAG----TTGT--AT-------ACATATA----TGTATAGC------TGA--AAT------------------------------------------------ACGC------CAGCG-----AA----GTCGCAT-TAAATCTAATTTTGTATTTTGTA----------------------------------------------------CTCT-------CTCGCAGCG---------------AA-TCAAGCAGGAA--------------------AATACCGGA----TAAT-AATT-GGCAAACATGCAGATCAA
droEle1	scf7180000490994:818686-818934 -		AG-TGC-----------ATC-------CA--TTTGGCAGCGAAACAA-----------------------------------------------------------------------------------------------------------------ACACCT---CAGTGGTT-CT---AACAGATA-----------------TATAAATTAAATATAGAA----AGTGCG--TGTGAAGGTTAAGCGG---CTCGAGTGCAAGTGCATTT--------------------ACATTTGGAAATAATAAA----ATC---ACTA------------------GTCAGC------TAA--AAT------------------------------------------------TCGC------CAGCA-----AA----ATCGCATTTAAATCTAATTCTGTATTCTTCA----------------------------------------------------CTCT-------CTCGCAGCG---------------AA-TCAAGCAGGAA--------------------AATACCGGA----TAAT-AATT-GGCAAAGATGCAGATCAA
droRho1	scf7180000777405:22191-22439 +		GG-TGC-----------AGC-------AA--TTTGGCAGCGAAACAA-----------------------------------------------------------------------------------------------------------------ACACCT---CAGTGGTT-CT---AACAGATA-----------------TATAAATTAAATATAGAA----AGTGCG--TGCGAAGGTTAAGCGA---TTCGAGTGCAAGTGCATTT--------------------ACATTTGGAAATAATAAA----TAC---GCTA------------------GTCAGC------TAA--AAT------------------------------------------------TCGC------CAGCA-----AA----TTCGCTTAAAAATCTAATTCTGTATTCTTCA----------------------------------------------------CTCT-------CTCGCAGCG---------------AA-TCAAGCAGGAA--------------------AATACCGGA----TAAT-AATT-GGCAAAGATGCAGATCAA
droFic1	scf7180000454126:28477-28720 -		AG-TGT-----------TTA-------AA--CTTGGCAGCGAAACAA-----------------------------------------------------------------------------------------------------------------ACGCCT---CAGTGGTT-CT---GGCATATATATCTATATATATAAATTATAAATTAAATATAGAA----AGTGCG--TGCGAAGGTTAAGCG-----CCGAGTGCAACCGCATTT--------------------GCATTTGGAAATAATAAG----TT-----------------------------------------------------------------------------------------------CAC------CTGCA-----AA----ATCGCAA-TAAATCTAATTCTGTATTCC-CA----------------------------------------------------CTCT-------CCCGCAGCG---------------AA-TCAAGCAGGAA--------------------AATACCGGA----TAAT-TTTT-CGCCAAGATGCAGATCAA
droKik1	scf7180000302707:268283-268564 -		GT--GC-------GAGCAGAGTTCTGGCA--CTTGGCATCGGATCGA-----------------------------------------------------------------------------------------------------------------A-----------CGGGT-CT---TGCAGATA-----------------TATGAATTAAATATAGCA----AGTGCG--TGCGAAGGTTACGCG-----TCGAGTGCATTTGCAT----------------------ATGTTTGGAACTCGTAGAGAAAAGTTAAAA-------CCCAAAA----TATAAAGGTGCTA----------------------------------------------------------------------CT-----AA----TTTAAAT-AAAGTCTAATTCTCGCTCTTGCCCT---TTCT--------GTCTCCGTATCAC-----------CCCCTACATCATCCG-------CCCGCAGCG---------------AT-TCAAGGGAAAG--------------------AACAACTTG----TAAT-ACTT-GGAAAAGATGCAGATCAA
droAna3	scaffold_13340:15336838-15337128 +		AA-TGC-----------TGT-------GC-----------CAAACGGTACACCACCCCCTTCGGCACCGTCACA-----------------------------------------------------------------------------------------------CAGAGTAT-AA---AAAATATA-----------------TATAAATTAAATATAGAAGAGAAGTGCG--TGCCAAGGTTAGGCG-----TCGAGTGCAAGTGCATTA-------------------TACGTATGGAAAGG-----------CA--AAAA------------------TTTCGC------CAAAAAAA------------------------------------------------ACGTC---GCCAAAGCTTCTAA----TTCAAAT-AATATCTAATTCTGTACTCATCCC-CC--ACTTCCCCTCTATTCCCGT---------------------------CTCT-------AACACAGCA---------------AC-TCAAGGAGGAAGA------------------AGAAAAGCT----AAAT-ATTC-GGAAAAAATGCAGATCAA
droBip1	scf7180000396708:4697309-4697581 -		AG-TGT-----------GAA-------------TGG-----------TG-ACC-CCCCCATC-----------AGCA-----------------------------------------------------------------------------------CCACCG---CCCACCTTAAA---AAAATATA-----------------TATAAATTAAATATAGA-----AGTGCG--TGCCAAGGTTAGGCG-----TCGAGTGCAAGTGCATTA-------------------TATGTATGGAAAGGAAAAT----TT-T--GC--------------------------------CAAAAA-A------------------------------------------------TAATCAAAGCCAAAGCTTCTAAATTCTTCAAAT-AAAATCTAATTCTGTACTTAC-CCTC---ACTTCC-----CCCTCT-----------------------------CTCC-------AACACAGCA---------------AC-TCAAGGAGGAAGA------------------AGAAAAGCT----AAAT-ATTC-GGAAAAAATGCAGATCAA
dp5	2:29498038-29498323 -		TGTTGT-----------AGT-------TT--TTTGGCAGCCAAACAAAAGAGCACCCTCT----------------------------------------------------------------------TCTG-------GTGTGTACCCC--------TCACAAGGCAACCGTTTTGT---TGCTA--A-----------------GATAAATTAAATATAGAATAA-AATGCGTGTTTGAAGGCTGCGCTGCTCTTTGAGTGCAAGTGCATTTATTTATAGTTCCAATTGAATATGTATGGAAAAGAGAGA------------------------------------------------------------------------------------------------------------------------AA----TGCAAAT-TTAATTTATTTCTGTGCTCTC-TCTC---TC--CT-----CTCTCCC-----------------------------TCC-------CTCTCAGCG---------------TTTTCGAAAAGTGA--------------------AATAC----------AA-ATTT-GGAAAAAATGCAGATCAA
droPer2	scaffold_6:4868674-4868959 -		TGTTGT-----------AGT-------TT--TTTGGCAGCCAAACAAAAGAGCACCCTCT----------------------------------------------------------------------TCTG-------GTGTGTACCCC--------TCACCAGGCAACCGTTTTGT---TGCTA--A-----------------GATAAATTAAATATAGAATAA-AATGCGTGTTTGAAGGCTGCGCTGCTCTTTGAGTGCAAGTGCATTTATTTATAGTTCCAATTGAATATGTATGGAAAAGAGAGA------------------------------------------------------------------------------------------------------------------------AA----TGCAAAT-TTAATTTATTTCTGTGCTCTC-TCTC---TC--CT-----CTCTCCC-----------------------------TCC-------CTCTCAGCG---------------TTTTCGAAAAGTGA--------------------AATAC----------AA-ATTT-GGAAAAAATGCAGATCAA
droWil2	scf2_1100000004943:3793257-3793627 -		CA-CAT-----------CAT-------TT--CCTA-------------------------------------------------------CTATTAGCAATG----------------------------------ATTCACTTTGTTTAA-CAAAAAAAGCATCT---ACAAAGAT-TA---ATTCGATA-----------------TAACATTTATATATAGAA----AACGTG--TGCGAAGGCTAAATA----TTTAAGTGCAAGTGCATCTATATATAT--CTAAACATATATATATAAAA-------A----TC-T--TC-----ATAGAAATATATATGTATAAATG------G----ATATTCAATAAAAACGAGAAAATTTATTAAACCAAAAAAAAAAAAAAAACCGA------CAACA-----AT----TTG---A-TAAGTCTTTCC-----------CCT---TTCT--CCCTCTCTCTCTCT-CTC---TCT-----------------CTGT-------TTCTCCCTA---------------TT-TTAGGCAAAAA-ACATTATCAAATAATATTGAAAAGT-GT----TAATAATTTTGGC-AAAATGCAGATTAA
droVir3	scaffold_13047:7277741-7278025 -		AG-AAAAGTGCGAAAACT-----------------------AATG----------------------------AAAA--TATATTTTTT-CTATTGTCATTGAATATAGTCGCAA-AAATTATATCCTCGC-GGTGATCAAGTGTGTGTCT--------------------------------------------------------------------------C----TGTGTG--TGTGAAGGTTGCAT------TCAAGTGCAAC-ACATTC--------------------AATTTC----------------------------------------------------------------------------------------------------------------------------------------------AAA-GAAATCTAAATCCAAGTTTCC-CCTC---TCT--CTCTCTCTCTCTGCTTCACTGTTTTTCGACC--G-------TTCTCCAATCCGTTA---CGCCTGTGCGTGCCACCTG-ACAAGCAGTAA--------------------ATCAACGGAGCAATAAA-ATTG-GGAAAAAATGCAGATCAA
droMoj3	scaffold_6540:3198290-3198593 -		GC-CGC-------AAACTAAT---------------------------------------------------------------TTCTT-CTATTGTCATTGAAAATATAAGCAAT--ATTGCATCCTTGCCCGTGATCGCGTGT----------------------------------A---AACGTGCATGTTTGTGTGTATGCGTGCGAGCTTGAGT---GTT----TGTGTG--TGTGAAGGTTGCAT------TCAAGTGCAAC-AAATTC--------------------AATTTAAAAAAAAATAAG----T----------------------------------------------------------------------------------------------------------------------------AAAT-AAAATCTAAATCAAAATTTCC-CCTC---TCT--T-----CTCCCCGTTTCTCTGTTGTGCCACCCCA-------TTCTCCCATCTGACGAAACGA-C---------ACCTG-TCAAGCAGTAA--------------------ATTAACGGAGCA-ATAC-ATTT-GG-GAAAATGCAGATCAA
droGri2	scaffold_14830:3132156-3132432 -		TG-A--------------------------------AAGTGAATG----------------------------CAAAGCAACATTTTATGTCATTGTCATTGAAAGCATACGCATTAAACTGCATCCTCCCCCGTGATCGCGCGTGTG-------------------------------------------------------TG------------TGTGTGACT----TGTGTG--TGTGAAGGTTGCATT----CTCAAGTGCA--------------------------------------ACCAACACA----TT-----CAA------------------TTTC----------------------------------------------------------------------------------------------TAT-GAAATCTAAATCAAAATTTCCACC-CCTTTCT--CTCTCTATTTCTCT-TCA---TTTTTGGA------------CTCTCGCATTCGTCG---CGC-T---------GCGTG----TGCAGTAA--------------------ATCAACGGAGCAATAAC-ATTT-GGAAAAAATGCAGATCAA

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

GG-CGC-----------AGC-------GA--TTTGGCAGCGACAC----------------------------AGAA-----------------------------------------------------------------------------------TCACCA---AAGTGTTTTTT---GGCAGATA-----------------TATAAATTAAATATAGAA----AGTGCG--TGCGAAGGTTAAGCG-----TCGAGTGCAAGTGCATTT--------------------ACGTTTGGAAATAATAAA----TGCT--ACAA------------------TTTAGT------TGA--AAT------------------------------------------------TCGC------CAGCG-----AA----TTCGCAT-TAAATCTAATTCTGTATTTTGTA----------------------------------------------------CTCT-------CTCGCAGCG---------------AA-TCAAGCAGGAA--------------------AATACCGGA----TAAT-AATT-GGCAAAGATGCAGATCAA	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.............................................................................................................................................................................GTTTTTT---GGCAGATA-----------------TATAAATTAAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA----TAAT-AATT-GGCAAAGATGCAG.....	23	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCGGA----TAAT-AATT-GGCAAAGATGCAGA....	29	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0

droSec2

GG-CGC-----------AGC-------GA--TTTGGCAGCGAAAC----------------------------AGAA-----------------------------------------------------------------------------------ACACCA---AAGTGTTTTTT---GGCAGATA-----------------TATAAATTAAATATAGAA----AGTGCG--TGCGAAGGTTAAGCG-----TCGAGTGCAAGTGCATTT--------------------ACATTTGGAAATAATAAA----TGCT--ACAA------------------TTTAGT------TGA--AAT------------------------------------------------CCGC------CAGCG-----AA----TTCGCAT-TAAATCTAATTCTGTATTTTGTA----------------------------------------------------CTCT-------CTCGCAGCG---------------AA-TCAAGCAGGAA--------------------AATACCGGA----TAAT-AATT-GGCAAAGATGCAGATCAA	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----TAAT-AATT-GGCAAAGATGC.......	20	1	1.00	1	0	1	0	0
..............................................................................................................................................................................................................................AGAA----AGTGCG--TGCGAAGGTTAAGCG-----.......................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	1
........................................GAAAC----------------------------AGAA-----------------------------------------------------------------------------------ACACCA---AAGTGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0
............................................................................................................................................................................................................................ATAGAA----AGTGCG--TGCGAAG....................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCGGA----TAAT-AATT-GGCAA.............	20	1	1.00	1	1	0	0	0
......................................................................................................................................................................................................................................AGTGCG--TGCGAAGGTTAAG..............................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0

dm3

GG-CGC-----------AGC-------GA--TTTGGCAGCGAAAC----------------------------AAAA-----------------------------------------------------------------------------------ACACCA---AAGTGTTA-TT---GGCAGATATATA-------------TGTAAATTAAATATAGAA----AGTGCG--TGCGAAGGTTAAGCG-----TAGAGTGCAAGTGCATTT--------------------ATATTTGGAAATAATAAA----TGCT--ACAA------------------TTTAGT------TGA--AAT------------------------------------------------CCGC------CAGCG-----AA----TTCGCAT-TAAATCTAATTCTGTATTTTGTA----------------------------------------------------CTCT-------CTCGCAGCG---------------AA-TCAAGCAGGAA--------------------AATACCGGA----TAAT-AATT-GGCAAAGATGCAGATCAA	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.......................................................................................................................................................................................................................................................TAAGCG-----TAGAGTGCAAGTGC.........................................................................................................................................................................................................................................................................................................................................................................	20	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCAGGAA--------------------AATACCGGA----TAAT-.......................	22	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGGA----TAAT-AATT-GGCAAAGATGC.......	25	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--------------------AATACCGGA----TAAT-AATT-GGCA..............	23	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................GAAGGTTAAGCG-----TAGAGTGC...............................................................................................................................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-AATT-GGCAAAGATGCAGATCA.	23	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT-AATT-GGCAAAGATGCAGATC..	23	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAA--------------------AATACCGGA----TAAT-AATT-GG................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-TCAAGCAGGAA--------------------AATACCGGA----TAAT-AATT-..................	29	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................GTGCG--TGCGAAGGTTAAGCG-----.......................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACCGGA----TAAT-AATT-GGCA..............	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................AA----AGTGCG--TGCGAAGGTTAAG..............................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTTGTA----------------------------------------------------CTCT-------CTCGCAG............................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------CTCGCAGCG---------------AA-TCAAGCAGG...............................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................GCG--TGCGAAGGTTAAGCG-----.......................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAATTCTGTATTTTGTG----------------------------------------------------T.............................................................................................................	19	6	0.33	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

GG-TGC-----------AGT-------TT-TTTTGGCAGCGAATC----------------------------AGAA-----------------------------------------------------------------------------------ACACC-----AGTGTTT-TT---GGCAGATA-----------------TATAAATTAAATATAGAA----AGTGCG--TGCGAAGGTTAAGCG-----TCGAGTGCAAGTGCATTT--------------------ACATTTGGAAATAATAAA----TTCT--GCAA------------------TTTAGT------TGA--AAT------------------------------------------------CCGC------CAGCG-----AA----TTCGCAT-TAAATCTAATTCTGTATTTTGTA----------------------------------------------------CTCT-------CTCGCAGCG---------------AA-TCAAGCAGGAA--------------------AATACCGGA----TAAT-AATT-GGCAAAGATGCAGATCAA	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----TAAT-AATT-GGCAAAGATGCA......	21	1	2.00	2	0	0	0	0	2	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------AA-TCAAGCAGGAA--------------------AATACCGGA----TAAT-A......................	28	1	1.00	1	1	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAA--------------------AATACCGGA----TAAT-AATT-GG................	22	1	1.00	1	0	0	0	0	1	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--------------------AATACCGGA----TAAT-AATT-GGCAA.............	24	1	1.00	1	1	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------AA-TCAAGCAGGAA--------------------AATACCGG.................................	22	1	1.00	1	0	0	0	0	0	1	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACCGGA----TAAT-AATT-GGCAAAGATGC.......	27	1	1.00	1	1	0	0	0	0	0	0
.................................................................................................................................................................................................................................................GAAGGTTAAGCG-----TCGAGTGCA..............................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-TCAAGCAGGAA--------------------AATACCGG.................................	21	1	1.00	1	0	0	0	0	0	1	0
....................................................................................................................................................................................................................................................GGTTAAGCG-----TCGAGTGCAAGT...........................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................A----TTCGCAT-TAAATCTAATTCTGTATT.......................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------AA-TCAAGCAGGAA--------------------AATACCGGA----............................	23	1	1.00	1	0	0	0	0	1	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-TCAAGCAGGAA--------------------AATACCGGA----T...........................	22	1	1.00	1	0	0	0	1	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACCGGA----TAAT-AATT-GGC...............	19	1	1.00	1	0	0	0	0	0	1	0

droYak3

GG-TGC-----------AAC-------TT-TTTTGGCAGCGAATC----------------------------CAAA-----------------------------------------------------------------------------------ACACCG---AAGTGTTT-TT---TGCAGATA-----------------TATAAATTAAATATAGAA----AGTGCG--TGCGAAGGTTAAGCG-----TCGAGTGCAAGTGCATTT--------------------ACATTTGGAAATAATAAA----TTCT--ACAA------------------TTTAGT------TGA--AAT------------------------------------------------CCGT------CAGCA-----AA----ATCGCAT-TAAATCTAATTCTGTATTTTGTA----------------------------------------------------CTCT-------CTCGCAGCG---------------AA-TCAAGCAGGAA--------------------AATACCGGA----TAAT-AATT-GGCAAAGATGCAGATCAA	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.....................................AGCGAATC----------------------------CAAA-----------------------------------------------------------------------------------ACACCG---AAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................AAGCG-----TCGAGTGCAAGTGC.........................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................GCG--TGCGAAGGTTAAGCG-----TCGAG..................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0
............................................................................................................................................................................................................................ATAGAA----AGTGCG--TGCGAAGGTTAAGCG-----T......................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
............................T-TTTTGGCAGCGAATC----------------------------CAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACCGGA----TAAT-AATT-GG................	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATCTAATTCTGTATTTTGTA----------------------------------------------------CTCT-------...................................................................................................	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGGA----TAAT-AATT-GGCAAAGAT.........	22	2	0.50	1	0	0	0	0	0	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACCGGA----TAAT-AATT-GGCAAAGATGC.......	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACCGGA----TAAT-AATT-GGC...............	20	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0

droEug1

AAGTGC-----------AGT-------CT-TTTTGGCAATGAAACAA-----------------------------G-----------------------------------------------------------------------------------GCACTC---TGGTGGTT-TTTTTCGCACATA-----------------TATAAATTAAATTTAGAA----AGTGCGTGTGCGAAGGTTAAGCG-----TCGAGTGCAAGTGCATTA-------------------AACATTTGGAAAGAATAGA----TT-T--AC-----ATACATATATGTATGTACATATGTTACTAACAAAA------------------------------------------------TAGT------CAGCA-----AA----ATCGCAT-TAAATCTAATTTTGTATTTTATA----------------------------------------------------CTCT-------CTCGCAGCG---------------AA-TCAAGCAGGAA--------------------AATACCGGA----TAAT-AATT-GGCAAAGATGCAGATCAA	Size	Hit Count	Total Norm	Total
No Reads

droBia1

GG-TGC-----------AGC-------GCTTTTTGGCAGCGAAGC----------------------------AGAA-----------------------------------------------------------------------------------GCACCT---CGGTGGTT-TT---GGCAGATA-----------------TCTAAATTAAATATAGAA----AGTGCG--TGCGAAGGTTAAGCGT--CGTCGGGTCCGAGTGCATTT--------------------ACGTTTGGAAATAATAAG----TTAT--ACACTGCGTACATACAAGCGTG------------TAC--AAT------------------------------------------------ACGC------CAGCG-----AA----TTCGCAT-TAAATCTAATTTTGTATTTTGTA----------------------------------------------------CTCT-------CTCGCAGCG---------------AC-TCAAGCAGGAA--------------------AATACCGGA----TAGC-AATT-GGCAAAGATGCAGATCAA	Size	Hit Count	Total Norm	Total
No Reads

droTak1

AG-TGC-----------AGC-------GA--TTTGGCAGC-AGACAG--------------------------AGAA-----------------------------------------------------------------------------------ACACCT---CAGTGGTT-TT---GGCAGATA-----------------TTTAAGTTAAATATAGAA----AGTGCG--TGCGAAGGTTAAGCG-----TCGAGTGCAAGTGCATTT--------------------ACATTTGGAAATAATAAG----TTGT--AT-------ACATATA----TGTATAGC------TGA--AAT------------------------------------------------ACGC------CAGCG-----AA----GTCGCAT-TAAATCTAATTTTGTATTTTGTA----------------------------------------------------CTCT-------CTCGCAGCG---------------AA-TCAAGCAGGAA--------------------AATACCGGA----TAAT-AATT-GGCAAACATGCAGATCAA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

AG-TGC-----------ATC-------CA--TTTGGCAGCGAAACAA-----------------------------------------------------------------------------------------------------------------ACACCT---CAGTGGTT-CT---AACAGATA-----------------TATAAATTAAATATAGAA----AGTGCG--TGTGAAGGTTAAGCGG---CTCGAGTGCAAGTGCATTT--------------------ACATTTGGAAATAATAAA----ATC---ACTA------------------GTCAGC------TAA--AAT------------------------------------------------TCGC------CAGCA-----AA----ATCGCATTTAAATCTAATTCTGTATTCTTCA----------------------------------------------------CTCT-------CTCGCAGCG---------------AA-TCAAGCAGGAA--------------------AATACCGGA----TAAT-AATT-GGCAAAGATGCAGATCAA	Size	Hit Count	Total Norm	Total
No Reads

droRho1

GG-TGC-----------AGC-------AA--TTTGGCAGCGAAACAA-----------------------------------------------------------------------------------------------------------------ACACCT---CAGTGGTT-CT---AACAGATA-----------------TATAAATTAAATATAGAA----AGTGCG--TGCGAAGGTTAAGCGA---TTCGAGTGCAAGTGCATTT--------------------ACATTTGGAAATAATAAA----TAC---GCTA------------------GTCAGC------TAA--AAT------------------------------------------------TCGC------CAGCA-----AA----TTCGCTTAAAAATCTAATTCTGTATTCTTCA----------------------------------------------------CTCT-------CTCGCAGCG---------------AA-TCAAGCAGGAA--------------------AATACCGGA----TAAT-AATT-GGCAAAGATGCAGATCAA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

AG-TGT-----------TTA-------AA--CTTGGCAGCGAAACAA-----------------------------------------------------------------------------------------------------------------ACGCCT---CAGTGGTT-CT---GGCATATATATCTATATATATAAATTATAAATTAAATATAGAA----AGTGCG--TGCGAAGGTTAAGCG-----CCGAGTGCAACCGCATTT--------------------GCATTTGGAAATAATAAG----TT-----------------------------------------------------------------------------------------------CAC------CTGCA-----AA----ATCGCAA-TAAATCTAATTCTGTATTCC-CA----------------------------------------------------CTCT-------CCCGCAGCG---------------AA-TCAAGCAGGAA--------------------AATACCGGA----TAAT-TTTT-CGCCAAGATGCAGATCAA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

GT--GC-------GAGCAGAGTTCTGGCA--CTTGGCATCGGATCGA-----------------------------------------------------------------------------------------------------------------A-----------CGGGT-CT---TGCAGATA-----------------TATGAATTAAATATAGCA----AGTGCG--TGCGAAGGTTACGCG-----TCGAGTGCATTTGCAT----------------------ATGTTTGGAACTCGTAGAGAAAAGTTAAAA-------CCCAAAA----TATAAAGGTGCTA----------------------------------------------------------------------CT-----AA----TTTAAAT-AAAGTCTAATTCTCGCTCTTGCCCT---TTCT--------GTCTCCGTATCAC-----------CCCCTACATCATCCG-------CCCGCAGCG---------------AT-TCAAGGGAAAG--------------------AACAACTTG----TAAT-ACTT-GGAAAAGATGCAGATCAA	Size	Hit Count	Total Norm	Total
No Reads

droAna3

AA-TGC-----------TGT-------GC-----------CAAACGGTACACCACCCCCTTCGGCACCGTCACA-----------------------------------------------------------------------------------------------CAGAGTAT-AA---AAAATATA-----------------TATAAATTAAATATAGAAGAGAAGTGCG--TGCCAAGGTTAGGCG-----TCGAGTGCAAGTGCATTA-------------------TACGTATGGAAAGG-----------CA--AAAA------------------TTTCGC------CAAAAAAA------------------------------------------------ACGTC---GCCAAAGCTTCTAA----TTCAAAT-AATATCTAATTCTGTACTCATCCC-CC--ACTTCCCCTCTATTCCCGT---------------------------CTCT-------AACACAGCA---------------AC-TCAAGGAGGAAGA------------------AGAAAAGCT----AAAT-ATTC-GGAAAAAATGCAGATCAA	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------AC-TCAAGGAGGAAGA------------------AGAAAA...................................	22	1	1.00	1	0	0	0	0	1	0
.................................................................................................................................................................................................................................AGAGAAGTGCG--TGCCAAGGTTA................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1
...........................GC-----------CAAACGGTACACCACCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------AC-TCAAGGAGGAAGA------------------AGAAA....................................	21	1	1.00	1	0	0	0	0	1	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTACTCATCCC-CC--ACTT........................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0

droBip1

AG-TGT-----------GAA-------------TGG-----------TG-ACC-CCCCCATC-----------AGCA-----------------------------------------------------------------------------------CCACCG---CCCACCTTAAA---AAAATATA-----------------TATAAATTAAATATAGA-----AGTGCG--TGCCAAGGTTAGGCG-----TCGAGTGCAAGTGCATTA-------------------TATGTATGGAAAGGAAAAT----TT-T--GC--------------------------------CAAAAA-A------------------------------------------------TAATCAAAGCCAAAGCTTCTAAATTCTTCAAAT-AAAATCTAATTCTGTACTTAC-CCTC---ACTTCC-----CCCTCT-----------------------------CTCC-------AACACAGCA---------------AC-TCAAGGAGGAAGA------------------AGAAAAGCT----AAAT-ATTC-GGAAAAAATGCAGATCAA	Size	Hit Count	Total Norm	Total
No Reads

dp5

TGTTGT-----------AGT-------TT--TTTGGCAGCCAAACAAAAGAGCACCCTCT----------------------------------------------------------------------TCTG-------GTGTGTACCCC--------TCACAAGGCAACCGTTTTGT---TGCTA--A-----------------GATAAATTAAATATAGAATAA-AATGCGTGTTTGAAGGCTGCGCTGCTCTTTGAGTGCAAGTGCATTTATTTATAGTTCCAATTGAATATGTATGGAAAAGAGAGA------------------------------------------------------------------------------------------------------------------------AA----TGCAAAT-TTAATTTATTTCTGTGCTCTC-TCTC---TC--CT-----CTCTCCC-----------------------------TCC-------CTCTCAGCG---------------TTTTCGAAAAGTGA--------------------AATAC----------AA-ATTT-GGAAAAAATGCAGATCAA	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCCC-----------------------------TCC-------CTCTCAGCG---------------TTT........................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................GTTCCAATTGAATATGTATGGAAAAGAG..................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................GCGTGTTTGAAGGCTGCGCTG...........................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTCTC-TCTC---TC--CT-----CTCTC............................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TGAAGGCTGCGCTGCTCTTTG....................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0
..........................................................................................................................................................................ACCGTTTTGT---TGCTA--A-----------------GATA.....................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................CAAAAGAGCACCCTCT----------------------------------------------------------------------TCTG-------G...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................TGTATGGAAAAGAGAGA------------------------------------------------------------------------------------------------------------------------AA----TG...............................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0
.......................................................................................................................................................................................................................................................................................................TATGTATGGAAAAGAGAGA------------------------------------------------------------------------------------------------------------------------AA----.................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................TGCGTGTTTGAAGGCTGCGCTGCTCTT......................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0

droPer2

TGTTGT-----------AGT-------TT--TTTGGCAGCCAAACAAAAGAGCACCCTCT----------------------------------------------------------------------TCTG-------GTGTGTACCCC--------TCACCAGGCAACCGTTTTGT---TGCTA--A-----------------GATAAATTAAATATAGAATAA-AATGCGTGTTTGAAGGCTGCGCTGCTCTTTGAGTGCAAGTGCATTTATTTATAGTTCCAATTGAATATGTATGGAAAAGAGAGA------------------------------------------------------------------------------------------------------------------------AA----TGCAAAT-TTAATTTATTTCTGTGCTCTC-TCTC---TC--CT-----CTCTCCC-----------------------------TCC-------CTCTCAGCG---------------TTTTCGAAAAGTGA--------------------AATAC----------AA-ATTT-GGAAAAAATGCAGATCAA	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG---------------TTTTCGAAAAGTGA--------------------AAT......................................	19	1	1.00	1	0	0	1	0	0	0
.......................................................................................................................................................................................................................................ATGCGTGTTTGAAGGCTGC...............................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0

droWil2

CA-CAT-----------CAT-------TT--CCTA-------------------------------------------------------CTATTAGCAATG----------------------------------ATTCACTTTGTTTAA-CAAAAAAAGCATCT---ACAAAGAT-TA---ATTCGATA-----------------TAACATTTATATATAGAA----AACGTG--TGCGAAGGCTAAATA----TTTAAGTGCAAGTGCATCTATATATAT--CTAAACATATATATATAAAA-------A----TC-T--TC-----ATAGAAATATATATGTATAAATG------G----ATATTCAATAAAAACGAGAAAATTTATTAAACCAAAAAAAAAAAAAAAACCGA------CAACA-----AT----TTG---A-TAAGTCTTTCC-----------CCT---TTCT--CCCTCTCTCTCTCT-CTC---TCT-----------------CTGT-------TTCTCCCTA---------------TT-TTAGGCAAAAA-ACATTATCAAATAATATTGAAAAGT-GT----TAATAATTTTGGC-AAAATGCAGATTAA	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGT-GT----TAATAATTTTGGC-..............	19	1	1.00	1	0	0	0	1	0
..............................................................................................................................................................................................................................AGAA----AACGTG--TGCGAAGGCTA................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATAATATTGAAAAGT-GT----............................	20	1	1.00	1	0	0	0	1	0
.......................................................................................................................................................................................................................................................................................................................................................................................AAAACGAGAAAATTTATTAAACC...........................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1

droVir3

AG-AAAAGTGCGAAAACT-----------------------AATG----------------------------AAAA--TATATTTTTT-CTATTGTCATTGAATATAGTCGCAA-AAATTATATCCTCGC-GGTGATCAAGTGTGTGTCT--------------------------------------------------------------------------C----TGTGTG--TGTGAAGGTTGCAT------TCAAGTGCAAC-ACATTC--------------------AATTTC----------------------------------------------------------------------------------------------------------------------------------------------AAA-GAAATCTAAATCCAAGTTTCC-CCTC---TCT--CTCTCTCTCTCTGCTTCACTGTTTTTCGACC--G-------TTCTCCAATCCGTTA---CGCCTGTGCGTGCCACCTG-ACAAGCAGTAA--------------------ATCAACGGAGCAATAAA-ATTG-GGAAAAAATGCAGATCAA	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACTGTTTTTCGACC--G-------T.............................................................................................................	18	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACC--G-------TTCTCCAATCCGTTA---CGCCT.......................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGAGCAATAAA-ATTG-G.................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................CAAGTGCAAC-ACATTC--------------------AATTTC----------------------------------------------------------------------------------------------------------------------------------------------AAA-GA.......................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...............................................................................................................................................................................................................................................GTGAAGGTTGCAT------TCAAGTGCAAC-AC.........................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAAA-ATTG-GGAAAAAA..........	18	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAAA-ATTG-GGAAAAAAT.........	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGGAGCAATAAA-ATTG-GGA...............	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................A-AAATTATATCCTCGC-GGTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA-ATTG-GGAAAAAATGCAGATC..	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGAGCAATAAA-ATTG-GGAAAAA...........	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--------------------ATCAACGGAGCAATAAA-ATTG-..................	23	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................ATTGTCATTGAATATAGTCGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-ATTG-GGAAAAAATGCAGATCAA	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................GTCGCAA-AAATTATATCCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................C----TGTGTG--TGTGAAGGTTGC...............................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

GC-CGC-------AAACTAAT---------------------------------------------------------------TTCTT-CTATTGTCATTGAAAATATAAGCAAT--ATTGCATCCTTGCCCGTGATCGCGTGT----------------------------------A---AACGTGCATGTTTGTGTGTATGCGTGCGAGCTTGAGT---GTT----TGTGTG--TGTGAAGGTTGCAT------TCAAGTGCAAC-AAATTC--------------------AATTTAAAAAAAAATAAG----T----------------------------------------------------------------------------------------------------------------------------AAAT-AAAATCTAAATCAAAATTTCC-CCTC---TCT--T-----CTCCCCGTTTCTCTGTTGTGCCACCCCA-------TTCTCCCATCTGACGAAACGA-C---------ACCTG-TCAAGCAGTAA--------------------ATTAACGGAGCA-ATAC-ATTT-GG-GAAAATGCAGATCAA	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACGA-C---------ACCTG-TCAAGCAGT...............................................................	22	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAACGA-C---------ACCTG-TCAAGCAG................................................................	22	1	1.00	1	0	0	0	1	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------TTCTCCCATCTGACGAAACGA-C---------ACC...........................................................................	26	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCA-ATAC-ATTT-GG-GAAA...........	20	1	1.00	1	0	0	0	0	0	1
.............................................................................................................................................................................................CATGTTTGTGTGTATGCGTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
.........................................................................................................................................................................................................................AGT---GTT----TGTGTG--TGTGAAGGTTGCA..............................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	1
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCA-ATAC-ATTT-GG-GA.............	18	1	1.00	1	1	0	0	0	0	0

droGri2

TG-A--------------------------------AAGTGAATG----------------------------CAAAGCAACATTTTATGTCATTGTCATTGAAAGCATACGCATTAAACTGCATCCTCCCCCGTGATCGCGCGTGTG-------------------------------------------------------TG------------TGTGTGACT----TGTGTG--TGTGAAGGTTGCATT----CTCAAGTGCA--------------------------------------ACCAACACA----TT-----CAA------------------TTTC----------------------------------------------------------------------------------------------TAT-GAAATCTAAATCAAAATTTCCACC-CCTTTCT--CTCTCTATTTCTCT-TCA---TTTTTGGA------------CTCTCGCATTCGTCG---CGC-T---------GCGTG----TGCAGTAA--------------------ATCAACGGAGCAATAAC-ATTT-GGAAAAAATGCAGATCAA	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

dsi_22493

3r:6210665-6210814 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads