ID:

dsi_22418

 Coordinate:

3l:4031105-4031399 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-44.2 -44.2 -44.2

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CGAGGAGGCGGAACCCGCCGGCTGCTCTCGCACGATAGCCGACGGCGCCAGTTAATTGCAAATACTGCTCGATACCCTACACTTGTCAGGGTGTACCCAACCGGCCCTAAAACTATCGTGCACCAATAAATTTTCCTAATGCCTTCGTATTGAATCAGTTTTTAACACTATGTTTGTAACACTATGTTAGTTAATAGTTCATTTTATTACAGGGTATAAAACTGTCTTCAGGCTCACTTCCCCTTCGCTGTTAGTGTGTTTTGGGCCCCACCGTTTTGTTGTTCTTTGGGGCCTGATTAACTTTTTGCGTGCTGCGTGTGCATTTGTCCATGTCCCCATCCTCAGCCCCATCCGTGCCATTCGGGATACATCTTCGTGCTGCAGATGCATTTGGC
***************************************************************************..((((((...((((((((((((....)).............)))))))...(((((....((((((....))))))....))))).....(((((.....(((((...)))))....))))).............(((.......(((....)))........))).....)))..))))))....((((((((................))))))))***************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
...........................................................................CCTACACTTGTCAGGGTG.............................................................................................................................................................................................................................................................................................................. 18 0 1 2.00 2 2 0 0 0 0 0
...................................................................................................................................................................................................................................................................................TTGTTGTTCTTTGGGGCCT..................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................................................TCAGGCTCAGTCCCCCTTCGAT.................................................................................................................................................. 22 3 1 1.00 1 0 1 0 0 0 0
.........................................................................................................................................................................................................TTTTAATGCAGGGTATAAA............................................................................................................................................................................... 19 2 3 0.33 1 0 0 1 0 0 0
..........................CTCGCACGAAAGCCGCC................................................................................................................................................................................................................................................................................................................................................................ 17 2 14 0.29 4 0 0 0 0 4 0
................................................................................................................................................................................................................................ACTTCGGGCTCAATTCCCCT....................................................................................................................................................... 20 3 4 0.25 1 0 0 0 1 0 0
..........................CTCGCACGAAAGCCGCCG............................................................................................................................................................................................................................................................................................................................................................... 18 2 4 0.25 1 0 0 1 0 0 0
..........................CTCGCACGAAAGCCG.................................................................................................................................................................................................................................................................................................................................................................. 15 1 9 0.22 2 0 0 2 0 0 0
...........................TCGCACGAAAGCCGCCG............................................................................................................................................................................................................................................................................................................................................................... 17 2 15 0.13 2 0 0 1 0 1 0
....................................................................................................CCGGCCCTAAGACGA........................................................................................................................................................................................................................................................................................ 15 2 20 0.10 2 0 0 2 0 0 0
..........................................................................................................................................................................................................................................................................................................................................................................GGGATGCATCGTCGTGCCG.............. 19 3 12 0.08 1 0 1 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................................................CTTCGTGATGCAGTTGGATTT... 21 3 13 0.08 1 0 0 0 0 0 1
.....................................................................CGATACCCTATACTTGG..................................................................................................................................................................................................................................................................................................................... 17 2 18 0.06 1 0 0 1 0 0 0
........................................................................TCCCCTACACTTCCCAGGG................................................................................................................................................................................................................................................................................................................ 19 3 18 0.06 1 0 0 1 0 0 0
........................................GACTGCGCCAGGTAATT.................................................................................................................................................................................................................................................................................................................................................. 17 2 19 0.05 1 0 0 0 1 0 0
.....................................................................................................................................................................................................................................................................................................................................GTCCACGTCCCCATCC...................................................... 16 1 20 0.05 1 0 0 0 1 0 0

Anti-sense strand reads

GCTCCTCCGCCTTGGGCGGCCGACGAGAGCGTGCTATCGGCTGCCGCGGTCAATTAACGTTTATGACGAGCTATGGGATGTGAACAGTCCCACATGGGTTGGCCGGGATTTTGATAGCACGTGGTTATTTAAAAGGATTACGGAAGCATAACTTAGTCAAAAATTGTGATACAAACATTGTGATACAATCAATTATCAAGTAAAATAATGTCCCATATTTTGACAGAAGTCCGAGTGAAGGGGAAGCGACAATCACACAAAACCCGGGGTGGCAAAACAACAAGAAACCCCGGACTAATTGAAAAACGCACGACGCACACGTAAACAGGTACAGGGGTAGGAGTCGGGGTAGGCACGGTAAGCCCTATGTAGAAGCACGACGTCTACGTAAACCG
*****************************************************************************************************..((((((...((((((((((((....)).............)))))))...(((((....((((((....))))))....))))).....(((((.....(((((...)))))....))))).............(((.......(((....)))........))).....)))..))))))....((((((((................))))))))*************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 M053
female body
 O002
Head
 SRR902009
testis
 SRR1275487
Male larvae		 M024
male body		 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 M023
head
 SRR553486
Makindu_3 day-old ovaries
 SRR1275483
Male prepupae		 SRR553485
Chicharo_3 day-old ovaries
...........................................................................................ACGGGGGTTGGCAGGGAT.............................................................................................................................................................................................................................................................................................. 18 3 20 1.25 25 1 19 0 0 1 0 0 0 1 2 1 0
.................................................................................................................................................................................................................................................................................................CCGGACTAACTCAAAAACGCC..................................................................................... 21 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................ACGCACGACGCACACGTA........................................................................ 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................GACACAAGTCCGAGGGAA............................................................................................................................................................ 18 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................CTACGTGGGTTGGCAGGGAT.............................................................................................................................................................................................................................................................................................. 20 3 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................CTACGGGGGTTGGCCGGGAT.............................................................................................................................................................................................................................................................................................. 20 3 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................TACGTGGGCTGGCCGGGAT.............................................................................................................................................................................................................................................................................................. 19 3 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................CCCACATGGGTTCGCCAG................................................................................................................................................................................................................................................................................................. 18 2 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................AGGGGAAGCAGTCGGGGTATG.......................................... 21 3 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0 0
...........................................................................................ACGGGGGCTGGCCGGGAT.............................................................................................................................................................................................................................................................................................. 18 3 20 0.15 3 0 1 0 0 0 1 0 0 1 0 0 0
....................................TCGACTGCCGCGGTC........................................................................................................................................................................................................................................................................................................................................................ 15 1 14 0.07 1 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................................GGACACAAGTCCGAGGGAA............................................................................................................................................................ 19 3 16 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................CATTGGTTGGCAGGGA............................................................................................................................................................................................................................................................................................... 16 2 19 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0
....................CGACGAGAGCGTGCTT....................................................................................................................................................................................................................................................................................................................................................................... 16 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................................................GACACAAGTCCGAGGGAAA........................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1
..............................................................................................GGGGCTGGCCGGGAT.............................................................................................................................................................................................................................................................................................. 15 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CAGCGTCAGGAGTCGGGGT............................................. 19 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:4031055-4031449 + dsi_22418 C-----GAGGAGGCGGAACCCGCCGGCTGCTCTCGCACGATAGCCGACGGCGCCAGTTAATTGCAAATACTGCTCGATACCCTACACTTGTCAGGGTGTACCCAACC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCCCTAAAACTATCGT-------------GCACCAATAAATTTTCCTAATGCCTTC-------GTATTG-------------------------------AATCAGTTTT-------------------------TA-----------------------------------------------------------------------------------ACACTATGTTTGTAACAC-------TATGTTAGTTAATAGTTCATT-----------------TTATTACAGGGTATAAAACTGTCTTC-AGGCTCACT-TCCCCT-TC--------------------GCTGTTAGTGTGT-T----TT-GGGC------------------------CCCAC------------CGTT---TTGTTGTTCTTTG----------GGG------------CCTGATTAACTTTTTGCGTGCTGCGTGT----------------------------------------GCATTTGTCCATGTCCCC----------------------ATCCTC------AGCCCCA----------------------------------------------------------------------------------------------------------T------------CCGTGCCATTCG--GGATACATCTTCGTGCTG----------------CAG-------ATGCATTT--GGC
droSec2 scaffold_2:4062982-4063387 + C-----GAGGAGGCGGAACCCGCCGGCTGCTCTCGCACGATAGCCGACGGCGCCAGTTAATTGCAAATACTGCTCGATACCCTACACTTGTCAGGGTGTACCCAACC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCCCTAAAACTATCTG-------------GCACCAATAAATTTTCCTAATGCCTCC-------GTATTG-------------------------------AATCAGTTTTAGCGGAATTAAGATAAATACCG-------------------------------------------------------------------------------------------------TTGTAACAC-------TATGTTAGTTAATAGTTCATT-----------------TTATTACAGTGTATAAAACTGTCTTC-ATGCTCACT-TCCCCT-TC--------------------GCTGTTAGTGTGT-T----TT-GGGC------------------------CCCAC------------CGTT---TTGTTGTTCTTTG----------GGG------------CCTGATTAACTTTTTGCGTGCTGCGTGT----------------------------------------GCATTTGTCCATGTCCCC----------------------ATCCTC------AGACCCA----------------------------------------------------------------------------------------------------------T------------CCGCGCCATTCG--GGATACATCTTCGTGCTG----------------CAG-------ATGCATTT--GGC
dm3 chr3L:4070463-4070871 + C-----GAGGAGGCGGAACCCGCCGGCTGCTCTCGCACGATAGCCGACGGCGCCAGTTAATTGCAAATACTGCTCGATACCCTACACTTGTCAGGGTGTACCCAACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTCTAAAACTATCTTGCATTAAAATCTTGCACCAATAAATTTTCCTAATACTT--------------------------------------------------------AT--GAATTAAGAAAAATCACA-------------------------------------------------------------------------------------------------TTGTAACACAGGAACCTATGTTAGTTTATAGTTCGTT-----------------TTATCACAGGGTATAAAACTGTCTTT-AGGCTCACATTCTCCT-TC--------------------GCTGTTAGTGTGT-T----TT-GGGC------------------------CCCAC------------CGTT---TTGTTGTTCTTTG----------GGG------------CCTGATTAACTTTTTGCGTGCTGCGTGT----------------------------------------GCATTTGTCCATGTCCCC----------------------ATCCTC------AGACACA----------------------------------------------------------------------------------------------------------T------------CCGCGCCATTCGGGGGATACATCTTCGTGCTG----------------CAG-------ATGCATTT--GGC
droEre2 scaffold_4784:6778537-6778933 + C-----GAGAAGGCGGAACCCGCCGGCTGCTCTCGCACGATAGCCGACGGCGCCAGTTAATTGCAAATACTGCCCGATACCCTACACTTGTCAGGGTGTACCCAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGCCGAAATCTATCGT-------------------------TCTCCGCATTCCTTT-------ACATTG-------------------------------AATCAATTTTATGGGAATGAAGAAAAA-CACT-------------------------------------------------------------------------------------------------TTGTGACACTTGAATTTATGTTAGTTAATAGTTAATT-----------------CCATCCCAGGGTATAAAAATGTCACTCATGCTCACTTTCCCCT-TC--------------------GCCGT----GTGT-T----TT-TGGC------------------------ATCAG------------CGTT---TTGTTGTTCTTTG----------GGG------------CCTGATTAACTTTTTGCGTGCTGCGTGT----------------------------------------ACATTTGTCCACGTCCCC----------------------ATCCTC------AACCCCA----------------------------------------------------------------------------------------------------------T------------CCTCGCCATTCG--GGATACATCTTCGTGCTG----------------CAG-------ATGCATTT--GGC
droYak3 3L:4639837-4640264 + C-----GAGGAGGCGGTACCCGCCGGCTGCTCTCGCACGATAGCCGACGGCGCCAGTTAATTGCAAATACTGCCCGATACCCTACACTTGTTGGGGTGTGCCCAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCCCGAAAGCTATCTT-------------GCA---------------------TTC-------GAATTGCATTGCAAACAAACATTTTCCAATTTTCTTTAATCAATTTTGTCGGAATGAAGAAAAAT--------------------------------------------------------------------------------------------------------------------TTATACAAGGCAATAGTTAATT-----------------TTATCGC----------TATGTCACT-ATGCTCACTTTTCCCT-TC--------------------GCTGTCAGTGTGT-T-----------------------------------------------------------TTCTTGTTCTTTG----------GGG------------CCTGATTAACTTTTTGCGTGCTGCGTGT----------------------------------------GCATTTTTCCATGTCCCC----------------------ATCCTC------AATCCCATCCCCAAATCCCATCCGCAATCCCATCCTCAATCCCATCCTCA------------ACAACA---------------------------------------------T------------CCTCGTCATTTG--GGATACATCTTCGTGCTG----------------CAG-------ATGCATTT--GGC
droEug1 scf7180000409466:1834617-1835133 + C-----TAGGAGGAGGGACCCGCCGGCTGCTCTCGCACGATAGCCGACGGCGCCAGTTAATTGCAAATACTGCTTGATTCCCTACATTTGGTAGGGCATAGACAAACATCC---AATCAATAAAAAATATTTGGAATGATAAAT---------TTATCCCAAAAATAAT------CTAA-------------------------TTTGGAATATTATAAGCTAATCTTCCTGTCCTACTAAATTGAACTCTCCTTCTTGTTATTAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATATGTACTAAAAACTCCCTACTACATGATTAATTTCCCTGCATATACTAAATTTAT---------------AGTATTACTT--------------------------------TTA-----CAG-----------------TTCG-CGTAGGGTATGCAAATGTCATCAAAGTTTATTTTTCCAT--CTA------------------CACATTTGTGTGT-T----TG-G--TCCC------------------------CT------C---GC-A-A---ATGTTGTTCTTTG----------GGG------------CCTGATTAACTTTTTGCGTGCTGCGTGT----------------------------------------GCATTTGTCCATGTCCCC----------------------ATCCCC------AGCCTC-------------------------------AACCCCATCCTCACAAGA-ATGCG-ACTGCAGC--------------------------------------------------------CCGAGCGATTCG--GGATCCATCTTCGTTCTA----------------CAG-------ATGCATTT--GGC
droBia1 scf7180000302428:760880-761404 + C-----GCGGAGGGTGGACCCGCCGGCTGCGCTCGCACGATAGCCGACGGCGCCAGTTAATTGCAAATACTGCTTGATTCCCTACATTTTTTCGGGTATAACCACAAAACCAGAAAAC-----------------TAATT---------TTATTTA--TTTAAATAAATGTTATA----------------------------------------------------------------------------CCTTTTTGTTACTAAATTCTCAGATGTATGTACACATCTTTTTAAAATTTAAAATTATTCAAAAATAACCATAGGCCC-----------------------------CGATAAATGCACA----------TTTTCAGGTATTGCA------------------------------------------------------------------CT------ACTTAGAAAATGTA--------------GTAC---TTGT-------------GCAACACTGAAAATAAGTGT-------------------------------------------------------------------TG-ATTAGAGCATGCAAAAGTCACTAACGTTACTCTCTCCC------------------ATTCACGACGTTGGTGTAT-T----TC-G--T-CC------------------------CT------C---AC-T-TTGGTTCTCTTTCTTTG----------GTG------------CCTGATTAACTTTTTGCGTGCTGCGTGT----------------------------------------GCATTTGTCCGCGTCCCC----------------------ATACCCA-----AACGCCATCTCC-------------------------AACCCCATCCCCACAAGAAATGCC-ACTGCAGC--------------------------------------------------------CAAAGTGATTCG--GGACTCATCTTCGTTCTA----------------CAG-------CTGCATTT--GGC
droTak1 scf7180000415778:139780-140069 - A-----ATAGG-------------------------------------------TGTTAATTAATAATTCTGC-----------------------------------------------------------------------------------------------------------------------------------------A--------ACACT----------------------------------------------------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------AATAGA---------------------------------------------------------------------------------------AGTGTTAATTAATAAAA-----------------------------------------------------TTCA-GGTAGGGGATGCAAATGTCATCGAGGTAAATTTTTCTCT------------------TTCTCGATGTTGGTACGT-TCGGTTC-GG-TCCC------------------------CT------C---AC-A-TTTGTTCTTGTTCTTCG----------GGG------------CCTGATTAACTTTTTGCGTGCTGCGTGT----------------------------------------GCATTTGTCCATGTCCCC---------------------------CATCCCCATTTCC-------------------------------ATTCCCATCCTCGCAAAAAATGCG-AATGCAGT--------------------------------------------------------CCCAGCGATTCG--GGATTCATCTTCGTTCTA----------------CAG-------CTGCATTT--GGC
droEle1 scf7180000491249:4914612-4914846 + T-----AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCATT-----------------TCG-TAAAGTGCATGAAAATGTCATCGAAACTCATTCTCCTCTTTC--------------------GCTGTTGGTGCTT-T----GT-G--TTCC------------------------CC------T---GC-A-TTTGTTGTTGGCCTTTG----------GGG------------CCTGATTAACTTTTTGCGTGCTGCGTGT----------------------------------------GCATTTGTCCATGTCCCC----------------------ATCCCC------ATCCCCA-------------------------------TTCCCATCCCTACAAGA-ATGCCAACTGCAGC--------------------------------------------------------CCAAGCGATTCG--GGATTCATCTTCGTTCTA----------------CAG-------CTGCATTT--GGA
droRho1 scf7180000779198:90515-90768 - TTTCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTAGGGCATAGAAATGTCATCGAGGCTCATTCCCCCATTTG--------------------GCTGCTGATGCCT-T----GG-G--TTCC------------------------CT------C---GC-A-TTTGTTGTTGGTTCTTG----------GGG------------CCTGATTAACTTTTTGCGTGCTGTGTGC--------------------------TGCGTGCTGCGTGTGCATTTGTCCATGTCCAT----------------------GTCCCCATCCCCATACTCATTCCC-------------------------ATTCCCATCCCTACAAGA-ATGCCAACTGCAGC--------------------------------------------------------CCGAGCGATTCG--GGATTCATCTTCGTTCTA----------------CAG-------CTGCATTT--GGC
droFic1 scf7180000454113:1283755-1283991 + TTTCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTAGGACATGCATATGCCATTGAAGCTCATTCTCCCCT-TCTG-------C----------ACTATTCTCGCTA-T----TG-G--TTGC------------------------CT------C---GC-A-TTTGATGTTGTTCTTTG----------GGG------------CCTGATTAACTTTTTGCGTGCTGCGTGT----------------------------------------GCATTTGTCCATGTCCCC----------------------AACCCC------ATCGCCATCTTCA-----CATCCAC------------AGCCCCATCCCCACAAGA-ATG-------CAGC--------------------------------------------------------CCGAACGATTCG--GGATCCATCTTCGTTCTA----------------CAG-------CTGCATTT--GGC
droKik1 scf7180000302388:280829-281093 - TTTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAGGGTATACAAATATCTTCGTAGCCCCTATT-CTTT-T---CATACTATGTTT-----------------CTT-----TT-TTGCCCC------------------------CT------T---GT-A-TTTGTTATTTTTA-CTG----------AAG------------CCTGATTAACTTTTTGCGTGCTGCGTGT----------------------------------------GCATTTGTCCATGTCCCC----------------------A-------------------------------------------------------------CAAGA-ATGC----TGCAGTGCATCTGAAATGTGCTCCCTGAGTGTGTGTT--------TGCGTGTGTGCCTGAGTTCGAGTGTTCCGAGGGATTCATCTTCTTTCATTGCTTTTGCGTTCTTTCAG-------CTGCATTT--GGC
droAna3 scaffold_13337:7113413-7113908 + TGGATTGGGGGGCAGGCAGCCGCCGGCTGCTCTCGCACGACAGCCGACGGCGCCAGTTAATTGCAAATACTGCCTGATACACTATGTCAAGGGGG----ATCTACA--ACTAGAAGACAAT-------ATTAAATATGATATTTTAATATTTTTTAGTCAGAAAATATTA----AAAATTTAATAACTATTTCTTTATTTATG-TTG--------ACTAAGTAT----------------------------------------------------------A-------------------------------------CATA----------------------------------------------------------------------------------------------------------------------------G------------CCTACTAGGATTTAAAAAATGTA--------------TTTC---ATATATCCTAAATTTCT---------------A------TTT--------------------------------CCA-----AAG-----------------AGAT-AGAAGGGTACGCTTATGATATTCA------CAG--------------------TTT-----------------CTT-----TTTA--TTTTTTTGCATATGAAAAATATGTAC-TACTGCTGCCCCCT-TCCT---CTGTTTCTG-TTG----------GGG------------CCTGATTAACTTTTTGCGTGCTGCGTGT----------------------------------------GCATTTGTCCATGTCCCC----------------------A-------------------------------------------------------------CAAGA-ATGCG-ACTGCAGAGCAT-------GTGTA---------TCCACGTATGTATTTGTATTTGT--------TCTTGAGTTTCG--GGAT-CTTTTTCGTTATA----------------TA---------CTCCTTT--CCT
droBip1 scf7180000396418:120189-120648 + T-----GGGGGGCAGGCAGCCGCCGGCTGCTCTCGCACGACAGCCAACGGCGCCAGTTAATTGCAAATACTGCTCGATACACTATTTCAAGAGGGTTCT----ATA--GCTACCAGACAGT----------AAATAAATTATTAAAATATTTTTTA--TAAAAAAAATTG----ACAGTTT--------------------TGTTTG--------ACAAGCTAT----------------------------------------------------------T-------------------------------------AAAA----------------------------------------------------------------------------------------------------------------------------G------------ACTACTACGATCTAAGAAC-------------------------------------------------------------------------------------------TAGTTTGTTAATAGTCACTTATTTTTATAAGTAAAAAAGG-ATAAGGGTATTCTAATATCATTGATGATTTTT-A-ATA----T-----------------------------------------A--TTTTTTTGCATTTAAAAAATATATAC-TACTGCTGCT---CC-C-CA--------TGCTCTA----------AGG------------CCTGATTAACTTTTTGCGTGCTGCGTGT----------------------------------------GCATTTGTCCATGTCCAC----------------------A-------------------------------------------------------------GAAGA-ATGCG-ACTGCAGAGCA------------------------TGCT----TGGATGTATTGGG--------GCTTGAGTTTCG--GGAGTCATCTTCTTC----GCTA-----------TACTCCTTTCCTGCATTT--GGC
dp5 XR_group6:6401539-6401791 - C-----GAAGAG-------CCGCCGGGTGCTCCCGCACGATAGCCGACGGCGCCAGTTAATTGCAAATGCTGCTCGCCACCCTGTCCAACGTGGGGTATGCCTGA---------------------------------------------------------------------------------------------------TTCAGAA--------GCGGT----------------------------------------------------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------AAGACA---CACTTTTAA-----------------------------------------------------------------------------------CTACTGTGA-----------------------------------------------------CCGC-AAAAGGGTATGCAAGTGTCGGTGAAGCTCTGT-T-CTC----TATGCGTTGCGTTTATT----------------------CT-------------------------------CGTTGCTGCT---GC-A-TT------TGTTG-TTG----------GGG------------CCTGATTAACTTTTTGCG-------TGTGCAT---------------------------------------TTTGTCCATGTCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_82:196247-196509 + TGGGGTGGTTC--GAAGAGCCGCCGGGTGCTCCCGCACGATAGCCGACGGCGCCAGTTAATTGCAAATGCTGCTCGCCACCCTGTCCAACGTGGGGTATGTCTGA---------------------------------------------------------------------------------------------------TTCAGAA--------GTGGT----------------------------------------------------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------AAGAAA---CACTTTTAA-----------------------------------------------------------------------------------CTACTGTGA-----------------------------------------------------CCGC-AAAAGGGTATGCAAGTGTCGGTGAAGCTCTGT-T-CTC----TATGCGTTGCGTTTATT----------------------CT-------------------------------CGTTGCTGCT---GC-A-TT------TGTTG-TTG----------GGG------------CCTGATTAACTTTTTGCGTG-------TGCGT---------------------------------------TTTGTCCATGTCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004822:2859845-2860043 - A-----GAGTATCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTTCGTCATTACTCACTTTCAATTTTCTATACCATTCTTATAT-------GT----TTCTT-----TT-TGGC-------------------------ATAT------------CGTT---TTCTTGTTG-TTG----------GGG------------ACTGATTAACTTTTTGCATGCTGTTTGTGCATTTTTACCCACTCCAAATGGTGTTG------------------------------------------------------------------------------------------------------------------------------CATTCTGT--------------------------------------------------------GTGTGTGTGTGT--GTGTATGTTTTTTTTTTT----------------TTG-------GCTCATCT--TCC
droVir3 scaffold_13049:15351762-15351907 - T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--GCTGTTGCGTAT-----------------CTT-----TT-T--A------------------------CTCGT------------TG--TTGTTGTTGTTGTTGA----------GGGACTGTGCAGTTTGCTGATTAACTTTTTGCATGCTGAGAGTGTGT---------------------------------------TTTGTCTCAGTGC------------------------------------------------------------------------------------------------------------A------------------------TGTT----------------------------------TGT--GTGTGTGTGTACTCTCTG----------------CAG--------TGCATCTGCGGC
droMoj3 scaffold_6680:21505000-21505159 + C-----CAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--GCTGTTGCGTAT-----------------CTT-----TT-T--A------------------------CTCGCT---------GC-T-ATTGTTGTTGTTG-TTGAGGCTGTTGGGGGACTGTGCAGTCTGCTGATTAACTTTTTGCATGCTGAGCGTGTGG-----------------------------TATGTGTGCATATGTATGT--------------------ATGTCTCTGTGTGT--------------------------------------------------------------------------------------------------------------------------------------------GTGT--GTGTACTTCTCTGT-----------------------------------------GC
droGri2 scaffold_14397:16719-16897 + C-----CAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--GCTGTTGCGCGT-----------------ATT-----TT-T--------------------------------------------CGTG---TCGTTGTTGTTGG----------GGGACTGTGCAGTGAGCTGATTAACTTTCTGCTTGCTGAGTGT----------------------------------------GCGTTTAGTTATATATACATATATATATATATATGTG--------------------------------------------------------------------------------------------------------------TGTGTGTGTGTGTGTGTGTTTAT--------TTGTGTATTTTG--GTGCGCATCTTTG---------------------C-----------AAATGC--GAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
C-----GAGGAGGCGGAACCCGCCGGCTGCTCTCGCACGATAGCCGACGGCGCCAGTTAATTGCAAATACTGCTCGATACCCTACACTTGTCAGGGTGTACCCAACC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCCCTAAAACTATCGT-------------GCACCAATAAATTTTCCTAATGCCTTC-------GTATTG-------------------------------AATCAGTTTT-------------------------TA-----------------------------------------------------------------------------------ACACTATGTTTGTAACAC-------TATGTTAGTTAATAGTTCATT-----------------TTATTACAGGGTATAAAACTGTCTTC-AGGCTCACT-TCCCCT-TC--------------------GCTGTTAGTGTGT-T----TT-GGGC------------------------CCCAC------------CGTT---TTGTTGTTCTTTG----------GGG------------CCTGATTAACTTTTTGCGTGCTGCGTGT----------------------------------------GCATTTGTCCATGTCCCC----------------------ATCCTC------AGCCCCA----------------------------------------------------------------------------------------------------------T------------CCGTGCCATTCG--GGATACATCTTCGTGCTG----------------CAG-------ATGCATTT--GGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................CCTACACTTGTCAGGGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00220000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGTTCTTTG----------GGG------------CCT..........................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
droSec2
C-----GAGGAGGCGGAACCCGCCGGCTGCTCTCGCACGATAGCCGACGGCGCCAGTTAATTGCAAATACTGCTCGATACCCTACACTTGTCAGGGTGTACCCAACC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCCCTAAAACTATCTG-------------GCACCAATAAATTTTCCTAATGCCTCC-------GTATTG-------------------------------AATCAGTTTTAGCGGAATTAAGATAAATACCG-------------------------------------------------------------------------------------------------TTGTAACAC-------TATGTTAGTTAATAGTTCATT-----------------TTATTACAGTGTATAAAACTGTCTTC-ATGCTCACT-TCCCCT-TC--------------------GCTGTTAGTGTGT-T----TT-GGGC------------------------CCCAC------------CGTT---TTGTTGTTCTTTG----------GGG------------CCTGATTAACTTTTTGCGTGCTGCGTGT----------------------------------------GCATTTGTCCATGTCCCC----------------------ATCCTC------AGACCCA----------------------------------------------------------------------------------------------------------T------------CCGCGCCATTCG--GGATACATCTTCGTGCTG----------------CAG-------ATGCATTT--GGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
dm3
C-----GAGGAGGCGGAACCCGCCGGCTGCTCTCGCACGATAGCCGACGGCGCCAGTTAATTGCAAATACTGCTCGATACCCTACACTTGTCAGGGTGTACCCAACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTCTAAAACTATCTTGCATTAAAATCTTGCACCAATAAATTTTCCTAATACTT--------------------------------------------------------AT--GAATTAAGAAAAATCACA-------------------------------------------------------------------------------------------------TTGTAACACAGGAACCTATGTTAGTTTATAGTTCGTT-----------------TTATCACAGGGTATAAAACTGTCTTT-AGGCTCACATTCTCCT-TC--------------------GCTGTTAGTGTGT-T----TT-GGGC------------------------CCCAC------------CGTT---TTGTTGTTCTTTG----------GGG------------CCTGATTAACTTTTTGCGTGCTGCGTGT----------------------------------------GCATTTGTCCATGTCCCC----------------------ATCCTC------AGACACA----------------------------------------------------------------------------------------------------------T------------CCGCGCCATTCGGGGGATACATCTTCGTGCTG----------------CAG-------ATGCATTT--GGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................ACCAATAAATTTTCCTAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18114.001400000000000000000000000000000000000000000000000000000000010400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTTG----------GGG------------CCTGATTAACTTTTT..............................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAGTTCGTT-----------------TTATCACAGGGTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGCCATTCGGGGGATACATCTTCG............................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACA----------------------------------------------------------------------------------------------------------T------------CCGCGCCATTCGGGGG.......................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATAGTTCGTT-----------------TTATCACAGGGTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAGTTCGTT-----------------TTATCACAGGGTATA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCT-TC--------------------GCTGTTAGTGTGT-T----TT-GGGC------------------------...........................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATTCGGGGGATACATCTTCGTGC.........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGCGTGCTGCGTGT----------------------------------------G........................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGAAAAATCACA-------------------------------------------------------------------------------------------------TTGTAACACAGGAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCCT-TC--------------------GCTGTTAGTGTGT-T----T.........................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCATGTCCCC----------------------ATCCTC------AGACACA----------------------------------------------------------------------------------------------------------....................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAGTTCGTT-----------------TTATCACAGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACA-------------------------------------------------------------------------------------------------TTGTAACACAGGAACCTATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAGTTTATAGTTCGTG-----------------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
droEre2
C-----GAGAAGGCGGAACCCGCCGGCTGCTCTCGCACGATAGCCGACGGCGCCAGTTAATTGCAAATACTGCCCGATACCCTACACTTGTCAGGGTGTACCCAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGCCGAAATCTATCGT-------------------------TCTCCGCATTCCTTT-------ACATTG-------------------------------AATCAATTTTATGGGAATGAAGAAAAA-CACT-------------------------------------------------------------------------------------------------TTGTGACACTTGAATTTATGTTAGTTAATAGTTAATT-----------------CCATCCCAGGGTATAAAAATGTCACTCATGCTCACTTTCCCCT-TC--------------------GCCGT----GTGT-T----TT-TGGC------------------------ATCAG------------CGTT---TTGTTGTTCTTTG----------GGG------------CCTGATTAACTTTTTGCGTGCTGCGTGT----------------------------------------ACATTTGTCCACGTCCCC----------------------ATCCTC------AACCCCA----------------------------------------------------------------------------------------------------------T------------CCTCGCCATTCG--GGATACATCTTCGTGCTG----------------CAG-------ATGCATTT--GGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............GAACCCGCCGGCTGCTCTCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
droYak3
C-----GAGGAGGCGGTACCCGCCGGCTGCTCTCGCACGATAGCCGACGGCGCCAGTTAATTGCAAATACTGCCCGATACCCTACACTTGTTGGGGTGTGCCCAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCCCGAAAGCTATCTT-------------GCA---------------------TTC-------GAATTGCATTGCAAACAAACATTTTCCAATTTTCTTTAATCAATTTTGTCGGAATGAAGAAAAAT--------------------------------------------------------------------------------------------------------------------TTATACAAGGCAATAGTTAATT-----------------TTATCGC----------TATGTCACT-ATGCTCACTTTTCCCT-TC--------------------GCTGTCAGTGTGT-T-----------------------------------------------------------TTCTTGTTCTTTG----------GGG------------CCTGATTAACTTTTTGCGTGCTGCGTGT----------------------------------------GCATTTTTCCATGTCCCC----------------------ATCCTC------AATCCCATCCCCAAATCCCATCCGCAATCCCATCCTCAATCCCATCCTCA------------ACAACA---------------------------------------------T------------CCTCGTCATTTG--GGATACATCTTCGTGCTG----------------CAG-------ATGCATTT--GGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................GTTGGGGTGTGCCCAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATT-----------------TTATCGC----------TATGTCACT-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---------------------------------------------T------------CCTCGTCATTTG--GGATAC...................................................2111.00101000000000
droEug1
C-----TAGGAGGAGGGACCCGCCGGCTGCTCTCGCACGATAGCCGACGGCGCCAGTTAATTGCAAATACTGCTTGATTCCCTACATTTGGTAGGGCATAGACAAACATCC---AATCAATAAAAAATATTTGGAATGATAAAT---------TTATCCCAAAAATAAT------CTAA-------------------------TTTGGAATATTATAAGCTAATCTTCCTGTCCTACTAAATTGAACTCTCCTTCTTGTTATTAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATATGTACTAAAAACTCCCTACTACATGATTAATTTCCCTGCATATACTAAATTTAT---------------AGTATTACTT--------------------------------TTA-----CAG-----------------TTCG-CGTAGGGTATGCAAATGTCATCAAAGTTTATTTTTCCAT--CTA------------------CACATTTGTGTGT-T----TG-G--TCCC------------------------CT------C---GC-A-A---ATGTTGTTCTTTG----------GGG------------CCTGATTAACTTTTTGCGTGCTGCGTGT----------------------------------------GCATTTGTCCATGTCCCC----------------------ATCCCC------AGCCTC-------------------------------AACCCCATCCTCACAAGA-ATGCG-ACTGCAGC--------------------------------------------------------CCGAGCGATTCG--GGATCCATCTTCGTTCTA----------------CAG-------ATGCATTT--GGCSizeHit CountTotal NormTotal
No Reads
droBia1
C-----GCGGAGGGTGGACCCGCCGGCTGCGCTCGCACGATAGCCGACGGCGCCAGTTAATTGCAAATACTGCTTGATTCCCTACATTTTTTCGGGTATAACCACAAAACCAGAAAAC-----------------TAATT---------TTATTTA--TTTAAATAAATGTTATA----------------------------------------------------------------------------CCTTTTTGTTACTAAATTCTCAGATGTATGTACACATCTTTTTAAAATTTAAAATTATTCAAAAATAACCATAGGCCC-----------------------------CGATAAATGCACA----------TTTTCAGGTATTGCA------------------------------------------------------------------CT------ACTTAGAAAATGTA--------------GTAC---TTGT-------------GCAACACTGAAAATAAGTGT-------------------------------------------------------------------TG-ATTAGAGCATGCAAAAGTCACTAACGTTACTCTCTCCC------------------ATTCACGACGTTGGTGTAT-T----TC-G--T-CC------------------------CT------C---AC-T-TTGGTTCTCTTTCTTTG----------GTG------------CCTGATTAACTTTTTGCGTGCTGCGTGT----------------------------------------GCATTTGTCCGCGTCCCC----------------------ATACCCA-----AACGCCATCTCC-------------------------AACCCCATCCCCACAAGAAATGCC-ACTGCAGC--------------------------------------------------------CAAAGTGATTCG--GGACTCATCTTCGTTCTA----------------CAG-------CTGCATTT--GGCSizeHit CountTotal NormTotal
No Reads
droTak1
A-----ATAGG-------------------------------------------TGTTAATTAATAATTCTGC-----------------------------------------------------------------------------------------------------------------------------------------A--------ACACT----------------------------------------------------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------AATAGA---------------------------------------------------------------------------------------AGTGTTAATTAATAAAA-----------------------------------------------------TTCA-GGTAGGGGATGCAAATGTCATCGAGGTAAATTTTTCTCT------------------TTCTCGATGTTGGTACGT-TCGGTTC-GG-TCCC------------------------CT------C---AC-A-TTTGTTCTTGTTCTTCG----------GGG------------CCTGATTAACTTTTTGCGTGCTGCGTGT----------------------------------------GCATTTGTCCATGTCCCC---------------------------CATCCCCATTTCC-------------------------------ATTCCCATCCTCGCAAAAAATGCG-AATGCAGT--------------------------------------------------------CCCAGCGATTCG--GGATTCATCTTCGTTCTA----------------CAG-------CTGCATTT--GGCSizeHit CountTotal NormTotal
No Reads
droEle1
T-----AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCATT-----------------TCG-TAAAGTGCATGAAAATGTCATCGAAACTCATTCTCCTCTTTC--------------------GCTGTTGGTGCTT-T----GT-G--TTCC------------------------CC------T---GC-A-TTTGTTGTTGGCCTTTG----------GGG------------CCTGATTAACTTTTTGCGTGCTGCGTGT----------------------------------------GCATTTGTCCATGTCCCC----------------------ATCCCC------ATCCCCA-------------------------------TTCCCATCCCTACAAGA-ATGCCAACTGCAGC--------------------------------------------------------CCAAGCGATTCG--GGATTCATCTTCGTTCTA----------------CAG-------CTGCATTT--GGASizeHit CountTotal NormTotal
No Reads
droRho1
TTTCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTAGGGCATAGAAATGTCATCGAGGCTCATTCCCCCATTTG--------------------GCTGCTGATGCCT-T----GG-G--TTCC------------------------CT------C---GC-A-TTTGTTGTTGGTTCTTG----------GGG------------CCTGATTAACTTTTTGCGTGCTGTGTGC--------------------------TGCGTGCTGCGTGTGCATTTGTCCATGTCCAT----------------------GTCCCCATCCCCATACTCATTCCC-------------------------ATTCCCATCCCTACAAGA-ATGCCAACTGCAGC--------------------------------------------------------CCGAGCGATTCG--GGATTCATCTTCGTTCTA----------------CAG-------CTGCATTT--GGCSizeHit CountTotal NormTotal
No Reads
droFic1
TTTCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTAGGACATGCATATGCCATTGAAGCTCATTCTCCCCT-TCTG-------C----------ACTATTCTCGCTA-T----TG-G--TTGC------------------------CT------C---GC-A-TTTGATGTTGTTCTTTG----------GGG------------CCTGATTAACTTTTTGCGTGCTGCGTGT----------------------------------------GCATTTGTCCATGTCCCC----------------------AACCCC------ATCGCCATCTTCA-----CATCCAC------------AGCCCCATCCCCACAAGA-ATG-------CAGC--------------------------------------------------------CCGAACGATTCG--GGATCCATCTTCGTTCTA----------------CAG-------CTGCATTT--GGCSizeHit CountTotal NormTotal
No Reads
droKik1
TTTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAGGGTATACAAATATCTTCGTAGCCCCTATT-CTTT-T---CATACTATGTTT-----------------CTT-----TT-TTGCCCC------------------------CT------T---GT-A-TTTGTTATTTTTA-CTG----------AAG------------CCTGATTAACTTTTTGCGTGCTGCGTGT----------------------------------------GCATTTGTCCATGTCCCC----------------------A-------------------------------------------------------------CAAGA-ATGC----TGCAGTGCATCTGAAATGTGCTCCCTGAGTGTGTGTT--------TGCGTGTGTGCCTGAGTTCGAGTGTTCCGAGGGATTCATCTTCTTTCATTGCTTTTGCGTTCTTTCAG-------CTGCATTT--GGCSizeHit CountTotal NormTotal
No Reads
droAna3
TGGATTGGGGGGCAGGCAGCCGCCGGCTGCTCTCGCACGACAGCCGACGGCGCCAGTTAATTGCAAATACTGCCTGATACACTATGTCAAGGGGG----ATCTACA--ACTAGAAGACAAT-------ATTAAATATGATATTTTAATATTTTTTAGTCAGAAAATATTA----AAAATTTAATAACTATTTCTTTATTTATG-TTG--------ACTAAGTAT----------------------------------------------------------A-------------------------------------CATA----------------------------------------------------------------------------------------------------------------------------G------------CCTACTAGGATTTAAAAAATGTA--------------TTTC---ATATATCCTAAATTTCT---------------A------TTT--------------------------------CCA-----AAG-----------------AGAT-AGAAGGGTACGCTTATGATATTCA------CAG--------------------TTT-----------------CTT-----TTTA--TTTTTTTGCATATGAAAAATATGTAC-TACTGCTGCCCCCT-TCCT---CTGTTTCTG-TTG----------GGG------------CCTGATTAACTTTTTGCGTGCTGCGTGT----------------------------------------GCATTTGTCCATGTCCCC----------------------A-------------------------------------------------------------CAAGA-ATGCG-ACTGCAGAGCAT-------GTGTA---------TCCACGTATGTATTTGTATTTGT--------TCTTGAGTTTCG--GGAT-CTTTTTCGTTATA----------------TA---------CTCCTTT--CCTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
T-----GGGGGGCAGGCAGCCGCCGGCTGCTCTCGCACGACAGCCAACGGCGCCAGTTAATTGCAAATACTGCTCGATACACTATTTCAAGAGGGTTCT----ATA--GCTACCAGACAGT----------AAATAAATTATTAAAATATTTTTTA--TAAAAAAAATTG----ACAGTTT--------------------TGTTTG--------ACAAGCTAT----------------------------------------------------------T-------------------------------------AAAA----------------------------------------------------------------------------------------------------------------------------G------------ACTACTACGATCTAAGAAC-------------------------------------------------------------------------------------------TAGTTTGTTAATAGTCACTTATTTTTATAAGTAAAAAAGG-ATAAGGGTATTCTAATATCATTGATGATTTTT-A-ATA----T-----------------------------------------A--TTTTTTTGCATTTAAAAAATATATAC-TACTGCTGCT---CC-C-CA--------TGCTCTA----------AGG------------CCTGATTAACTTTTTGCGTGCTGCGTGT----------------------------------------GCATTTGTCCATGTCCAC----------------------A-------------------------------------------------------------GAAGA-ATGCG-ACTGCAGAGCA------------------------TGCT----TGGATGTATTGGG--------GCTTGAGTTTCG--GGAGTCATCTTCTTC----GCTA-----------TACTCCTTTCCTGCATTT--GGCSizeHit CountTotal NormTotal
No Reads
dp5
C-----GAAGAG-------CCGCCGGGTGCTCCCGCACGATAGCCGACGGCGCCAGTTAATTGCAAATGCTGCTCGCCACCCTGTCCAACGTGGGGTATGCCTGA---------------------------------------------------------------------------------------------------TTCAGAA--------GCGGT----------------------------------------------------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------AAGACA---CACTTTTAA-----------------------------------------------------------------------------------CTACTGTGA-----------------------------------------------------CCGC-AAAAGGGTATGCAAGTGTCGGTGAAGCTCTGT-T-CTC----TATGCGTTGCGTTTATT----------------------CT-------------------------------CGTTGCTGCT---GC-A-TT------TGTTG-TTG----------GGG------------CCTGATTAACTTTTTGCG-------TGTGCAT---------------------------------------TTTGTCCATGTCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
TGGGGTGGTTC--GAAGAGCCGCCGGGTGCTCCCGCACGATAGCCGACGGCGCCAGTTAATTGCAAATGCTGCTCGCCACCCTGTCCAACGTGGGGTATGTCTGA---------------------------------------------------------------------------------------------------TTCAGAA--------GTGGT----------------------------------------------------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------AAGAAA---CACTTTTAA-----------------------------------------------------------------------------------CTACTGTGA-----------------------------------------------------CCGC-AAAAGGGTATGCAAGTGTCGGTGAAGCTCTGT-T-CTC----TATGCGTTGCGTTTATT----------------------CT-------------------------------CGTTGCTGCT---GC-A-TT------TGTTG-TTG----------GGG------------CCTGATTAACTTTTTGCGTG-------TGCGT---------------------------------------TTTGTCCATGTCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
A-----GAGTATCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTTCGTCATTACTCACTTTCAATTTTCTATACCATTCTTATAT-------GT----TTCTT-----TT-TGGC-------------------------ATAT------------CGTT---TTCTTGTTG-TTG----------GGG------------ACTGATTAACTTTTTGCATGCTGTTTGTGCATTTTTACCCACTCCAAATGGTGTTG------------------------------------------------------------------------------------------------------------------------------CATTCTGT--------------------------------------------------------GTGTGTGTGTGT--GTGTATGTTTTTTTTTTT----------------TTG-------GCTCATCT--TCCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--GCTGTTGCGTAT-----------------CTT-----TT-T--A------------------------CTCGT------------TG--TTGTTGTTGTTGTTGA----------GGGACTGTGCAGTTTGCTGATTAACTTTTTGCATGCTGAGAGTGTGT---------------------------------------TTTGTCTCAGTGC------------------------------------------------------------------------------------------------------------A------------------------TGTT----------------------------------TGT--GTGTGTGTGTACTCTCTG----------------CAG--------TGCATCTGCGGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
C-----CAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--GCTGTTGCGTAT-----------------CTT-----TT-T--A------------------------CTCGCT---------GC-T-ATTGTTGTTGTTG-TTGAGGCTGTTGGGGGACTGTGCAGTCTGCTGATTAACTTTTTGCATGCTGAGCGTGTGG-----------------------------TATGTGTGCATATGTATGT--------------------ATGTCTCTGTGTGT--------------------------------------------------------------------------------------------------------------------------------------------GTGT--GTGTACTTCTCTGT-----------------------------------------GCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGAGCGTGTGG-----------------------------TATGTGTG........................................................................................................................................................................................................................................................2211.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGTTG-TTGAGGCTGTT..............................................................................................................................................................................................................................................................................................................................................2011.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTTG-TTGAGGCTGTTGGGT..........................................................................................................................................................................................................................................................................................................................................2311.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-ATTGTTGTTGTTG-TTGAGG...................................................................................................................................................................................................................................................................................................................................................2020.501000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGTTGTTG-TTGAGGCTGT...............................................................................................................................................................................................................................................................................................................................................2220.501100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTTG-TTGAGGCTGTTGGT...........................................................................................................................................................................................................................................................................................................................................2230.331000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTTGTTG-TTGAGGCTG................................................................................................................................................................................................................................................................................................................................................2040.251100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGTTG-TTGAGGCTG................................................................................................................................................................................................................................................................................................................................................1850.201100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGTTG-TTGAGGCTGTTT.............................................................................................................................................................................................................................................................................................................................................2180.131100000
droGri2
C-----CAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--GCTGTTGCGCGT-----------------ATT-----TT-T--------------------------------------------CGTG---TCGTTGTTGTTGG----------GGGACTGTGCAGTGAGCTGATTAACTTTCTGCTTGCTGAGTGT----------------------------------------GCGTTTAGTTATATATACATATATATATATATATGTG--------------------------------------------------------------------------------------------------------------TGTGTGTGTGTGTGTGTGTTTAT--------TTGTGTATTTTG--GTGCGCATCTTTG---------------------C-----------AAATGC--GACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 01:31 AM