ID:

dsi_22335

 Coordinate:

x:20455678-20455903 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-0.9 -0.4 -0.4

Flybase annnotation

CDS [x_20455904_20457369_-]; exon [x_20455904_20457369_-]; exon [x_20455173_20455677_-]; CDS [x_20455583_20455677_-]; intron [x_20455678_20455903_-]; Antisense to intron [x_20448059_20459333_+]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GCTGACCCCTTCTCTGGAGCACGTTCACATTCAGAACGCGGATTCAGCGGGTGAGCAAAAACTTCCAAGCTAACCCATAAACTATAGTTCTCCTTCTTCACTATTAATATTACTCGCTATTAAAATCTTGTTTTGCTTACGTGAAAATTGTCTTTGTAAAACCTAAAGGAAAAGTTTTGTTTATGAAGAACCAACGTTAACTAAATATTTATATATTAAAACATCAAAAATGTCCCCCCAAATGAAACCAACGCCTAACCAAATTTTACTTTTCAGCAGTTGAATCCAGAAAGGAGAACGTTAATGATAAGGACAAAGAGGCGTCC
*************************************************************************************************************************************************************************************.......................................((((.....))))......................................******************************************************* 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 SRR618934
dsim w501 ovaries
 O002
Head
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
........................TCACATTCAGAACGCGGATTC......................................................................................................................................................................................................................................................................................... 21 0 1 5.00 5 2 3 0 0 0 0 0 0 0
.......................TTCACATTCAGAACGCGGATT.......................................................................................................................................................................................................................................................................................... 21 0 1 2.00 2 0 0 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................GATAAGGACAAAGAGGCGT.. 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................................................................................................CAGTTGAATCCAGAAGGGAGA............................. 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0
.............................TTCAGAACGCGGATTCAGCGGCAGT................................................................................................................................................................................................................................................................................ 25 3 1 1.00 1 0 0 0 0 0 1 0 0 0
..........................................................................................................................................................................................................................................................ACGCCTAACCAAATTTTACTT....................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0
..............TGGAGCACGTTCACATTCAGA................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................TATGAAGAACCAACGTTAACT............................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.CTGACCCCTTCTCTGGAGC.................................................................................................................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................TTAATGATAAGGACAAAGAGGCGTC. 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................................................................................................................GAGAACGTTAATGATAAGGAC............ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................GTTAATGATAAGGACAAAGAG...... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.........TTCTCTGGAGCACGTTCACAT........................................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0
.............................................................................................................................................................................................................................................................................................................TAATGATAAGGACAAAGAGGC.... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.........................................GTTCGGCGGGTGAGCAAA........................................................................................................................................................................................................................................................................... 18 2 8 0.13 1 0 0 0 0 0 1 0 0 0
.................................GAACACGGATTCATCGGCT.................................................................................................................................................................................................................................................................................. 19 3 16 0.06 1 0 0 0 1 0 0 0 0 0
...............................................................................................................................................AAAATAGTCTTTGTA........................................................................................................................................................................ 15 1 20 0.05 1 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

CGACTGGGGAAGAGACCTCGTGCAAGTGTAAGTCTTGCGCCTAAGTCGCCCACTCGTTTTTGAAGGTTCGATTGGGTATTTGATATCAAGAGGAAGAAGTGATAATTATAATGAGCGATAATTTTAGAACAAAACGAATGCACTTTTAACAGAAACATTTTGGATTTCCTTTTCAAAACAAATACTTCTTGGTTGCAATTGATTTATAAATATATAATTTTGTAGTTTTTACAGGGGGGTTTACTTTGGTTGCGGATTGGTTTAAAATGAAAAGTCGTCAACTTAGGTCTTTCCTCTTGCAATTACTATTCCTGTTTCTCCGCAGG
*******************************************************.......................................((((.....))))......................................************************************************************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 SRR902009
testis
 M024
male body		 M053
female body
 SRR553488
RT_0-2 hours eggs
.....................................................................................................................................................................................................................................................................................................CTCTTGCGGTTACTATTCCTGT........... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................TACTTTGGTTGCGGATTGGTT................................................................ 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0
............AGACCTCGTGCAAGTGTAAGT..................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................CTAGCAATTACTATTCTGGTTTCT....... 24 3 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................TTACAGGGGGGTTTACTTTGGTT........................................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0
........................................................................................AGAGGAAGAAGTGATAAT............................................................................................................................................................................................................................ 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................AGATATAATTTTGTAGTTTTT................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................GTGTAAGTCTTGCGCCTAAGT........................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0
....................TGCAAGTGAAAGTAATGCGC.............................................................................................................................................................................................................................................................................................. 20 3 9 0.89 8 0 0 0 0 1 0 4 3 0
.............................................................GAAGTTTCGTTTGGGTGTTTGAT.................................................................................................................................................................................................................................................. 23 3 2 0.50 1 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................GTCGACTTAGGTCTTTCTTGT............................. 21 3 2 0.50 1 0 0 1 0 0 0 0 0 0
........................................................................................AGAGGAAGAGATGATAAGTAT......................................................................................................................................................................................................................... 21 3 3 0.33 1 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................................................................................................AATGAAAAGGCGTCAACTTTGT....................................... 22 3 5 0.20 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................AGGTCTTTCCTTTTGAAGTTAC.................... 22 3 5 0.20 1 0 0 1 0 0 0 0 0 0
...............................................................................................................TGAGCGACTATTTTAGAA..................................................................................................................................................................................................... 18 2 8 0.13 1 0 0 0 0 0 0 0 0 1
..................................................................................................................................................................................................................................TTTTACAGGGAGGTTT.................................................................................... 16 1 9 0.11 1 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................................GTTTTTACCGGGGGATTTTC.................................................................................. 20 3 11 0.09 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................TTCTTTGGTTGCGGA...................................................................... 15 1 11 0.09 1 0 0 0 0 0 0 0 0 1
.......................................................................................AAGAGGTAGAAGTGA................................................................................................................................................................................................................................ 15 1 19 0.05 1 0 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:20455628-20455953 - dsi_22335 GCTGACCCCTTCTCTGGAGCACGTTCACATT---CAGAACGCGGATTCAGCGGGTGAGCAAAAACTTCCAAGCTAACCCATAAA----------------CTATAGTTCTC---------------------------------------------------------------CTTCTTC---ACTA-TTA---------------------------------------------ATA-----------------------------------T-------------TACTCGCTATTAAAATCTTGTTTTGCTTA------------------------CG----TGAAAATTGTCTTTGTAAAACCTAAAGGAAAAGTTTTGTTTATGAAGAACCAACGTTA-------ACTAAATATTTATATATTAAAACATCAA-------------------------------------------------------------------AAATGTCCCCCCAAATGAAACCAACGCCTAACCAAA--TTTTACTTTTCAGCAGTTGAATCCAGAAAGGAGAACGTTAATG---AT-------AAGGACAAAGAGGCGTCC
droSec2 scaffold_55:94638-94929 - GCTGACCCCTTCTCTGGAGCACGTTCACATT---CAGAACGCGGATTCAGCGGGTGAGCAAAAACTTCCAAGCTAACCCATAAA----------------CTATAGTTCTC---------------------------------------------------------------CTTCTTC---ACTA-TTA---------------------------------------------ATA-----------------------------------T-------------TACTCGCTATTAAAATCTTGTTTCGCTTA------------------------CG----TGAAAATTGTCTTTGTAAAACCTAAAGGAAAAGTTTTGT-----------------------------------TTCTATATTAAAACATCAA-------------------------------------------------------------------AAATGTCCCCCCAAATGAAACCAACGCCTAACCAAA--TTTTACTTTTCAGCAGTCGAATCCAGAAAGGAG------AATG---AT-------AAGGACAAAGAGGCGTCC
dm3 chrX:21938781-21939141 - GCTGACCCCTTCACTGGAGCAAGTTCACATT---CAGAACGCGGATTCAGCGGGTGAGCAAAAACTTCCAAGCTAACCCATAAA----------------CAATAGTTCTT---------------------------------------------------------------CTTCTTCCTCAC------------------------------------ATA----------------------------------------------------------------TACTCGCTATTATAATGTGTTTTCTTTTA------------------------CG------AAAA---------TAAAATCTAAAGAAAAAGTTTTGTTTATGAAGAACCAACGTTA-------ACTAAATATTTCTATATTAAAACATCAACTAAGCT---ATATAGAACTATGA-TTTTGT--------------AGTTATCATAATTTTTTATAGAAAATTTCCCCCTAAATGAAATCAATGCCTAACCCAA--TTTTACTTTTTAGAAGGCGAATCCAGCAAGGAGAACGTTAATG---AT-------AAGGACAAAGAGGCGTCC
droEre2 scaffold_4690:18310093-18310446 - GTTGACCCCTTCGCTGGAGCAAGTTCAGCTT---AAGGACCCGGATTTAGCGGGTGAGCAAAAACTCCCAAGCTAACACGTAAA----------------CAATAGTTCTTCAAATGAAGTCGTTAAAAAGGAATCAAGCTTATTAATTGCCTCAATCACAGTTGATCA----------------C------------------------------------CTA----------------------------------------------------------------TACTTGCTATA---------------------------------------------------------------------------------TTTTGCTTATCAAGAACCAACGTTA-------ACTGAATATTTCTATAATAAAATGTCGATTTAGCTCCGATAT---ACCAAGAATTTAGT--------------------CATAATTTT--ATGC-AA--GTTTACCCTAATGAGAGCA-CGCCTAACC-AA--TTTTACTTTTCAGCAGCCGAGTCCAGCAAGGAGAAAGTTAATG---AT-------AAGGACAAAGAGGCGTCG
droYak3 X:21378675-21379055 - GCTGACCCCTTCGCTGGAGCAAGTTCATCTT---AAGGACCCGGATACAGCAGGTGAGCAAGACGTCCCAAGCTAACCCTTAAA----------------TAATAGTTCTTCAA---AAGTCATTA---AGGAATCAATCTTAGAAATGAACTCAATCACAGTTGATCA----------------C------------------------------------CCG------------CTA-----------------------------------T-------------CACTCGCTATTATAGTCTAGTTTCTTTTA------------------------CG------------------------------------------TTTATCAAGAACTAACGTTG-------ACTGAACATTTCTGTATTAAAACTGCA-----------ATAA---ACGAAGAGTTTTGTCTGAGAATTACAATAATCATCATTTTTGTATATAA-AAATTTGTACCCTAATGAAAGCAACGCCTAACC-AA--TTCTACTTTTTAGCAGCCGAGTCCAGCAAGGAGAAAACTAATG---AT-------AAGGACAAAGAGGCGGGC
droEug1 scf7180000408987:491741-492070 + ACTGACCCCATCACTGGAGCAGGTTCAACTT---AAAGATACCGATTCAACAGGTAAGCGAGTTGT--TA--------------------------------------------------------AACTAAAATCTT-----------A----TCTTATAGTTGATCGCTTTGATTTCAATTCAT------------------------------------AAA----------------------------------------------------------------CAAAGACTATATAAATATATTTCCTTATAATAATAAGTGATTTGTAATTTAGATTTAAGTGAAA--TGCCAAAGTAAAAATAAA---------------------CAAAGCATTCACTATAAGA------ATTTTAACTTCATAGACTTTAA-------------------------------------------------------------------AACTGTCATCTAAAATTAAAGAG-TATTTTTACTAATATCATATATTTTAGCGGATGACTTTTGCAAGGAT------AAGG---AT-------AAGGACAGAGTCGATTCA
droBia1 scf7180000302244:163975-164374 - ACTGAGCCCCACGCTGGAGCAAGTGCAGCTT---AAAGACAAGGATGTTGCAGGTAAGGGTAAGCTACAAAGACATTTCCCGAG----------------CGGTAA--------------------ACTCAAACTTTG-----------A----ACCC----------------CTACTTT---AATGAGTAACGTGTACAACTAACTACATGCAAATATCGAAACAAATATTTTAAATAATACCTGACTTTATTAAGTCCAAGGATAACTTTTTCATCTGGCCATTAAATGTGGTTTTTGTAGCGAGTTCT---------------------TAATTCCTATG------CAAT---------TAAAAAGCAAGTAACAAAATT---ACATGAAGAGGCCACCCAATTCAAGA---------------------------A-------------------------------------------------------------------AACCCTTTTTAAATAC-AAAACAATACTGATTCTAATTTCATACATTTTAGCGTCCGACACGGTTCAGGAGAAGGATGATG---AT-------AAGGACAAAGAGGCGT--
droTak1 scf7180000415324:191462-191604 - TCTGACCCCTTCGCTGGAGCAGGTGCAGCTA---AATGACACGGATTTAGCAGGTAAGCGCAAACGTCCAAGTTATTCCACAAAAAAGTAGTTTTGACAACTCTAAATCTC---------------------------------------------------------------CTAATCA---AAGG-TCA---------------------------------------------AAA-----------------------------------T-------------AATACGTTTTTCAAATC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491087:854880-854949 + ATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACATTCCAGCGGCAGATTCCGGCAAGGAAGAGGATAATG---GTAAGGAG-CAGGAAAAGGAGGCGACG
droRho1 scf7180000778730:17222-17301 + GCTGACCCCCTCGCTGGAGCAGGTGCAGCTA---AAGGACACGGATTCAGCAGGTGAGCGCTTACTCCCCGGCCATTTCACAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454116:204230-204301 - GCTGACCCCTTCGTTGGAGCAGGTGCAGTTG---AAAGAACCGGATTCAGGAGGTGAGTCATAGGTGCCCAGTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302577:1662463-1662513 - TTTTATTTTTTAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCAGGAAAAGGAGGAGG---AT-------AAGGACAAGGAGACCGCT
droAna3 scaffold_13117:1890723-1890757 + A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGAAGGATAACG---AT-------TCGAACAAGGATGCGACG
droBip1 scf7180000396425:173693-173731 - ACTGGCGCCGTCGCTGGAACGAGTGCAATTA---GAGGACAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 XL_group1a:1060269-1060322 + GATAACTACATCGCCTGAACAATCAGAGTCCCGGGAGAGCGCAGCCTCCACGGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_26:1172972-1173025 + GATAAGTACATCGCCTGAACAATCAGAGTCCCGGGAGAGCGCAGCCTCCACGGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004909:7264971-7264980 - AGACACGCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C
droGri2 scaffold_14853:8892119-8892171 + CAGCAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCCGAGA-CGACAACAAC------AACAATAAC----AATA---GC--AGCGACGACA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GCTGACCCCTTCTCTGGAGCACGTTCACATT---CAGAACGCGGATTCAGCGGGTGAGCAAAAACTTCCAAGCTAACCCATAAA----------------CTATAGTTCTC---------------------------------------------------------------CTTCTTC---ACTA-TTA---------------------------------------------ATA-----------------------------------T-------------TACTCGCTATTAAAATCTTGTTTTGCTTA------------------------CG----TGAAAATTGTCTTTGTAAAACCTAAAGGAAAAGTTTTGTTTATGAAGAACCAACGTTA-------ACTAAATATTTATATATTAAAACATCAA-------------------------------------------------------------------AAATGTCCCCCCAAATGAAACCAACGCCTAACCAAA--TTTTACTTTTCAGCAGTTGAATCCAGAAAGGAGAACGTTAATG---AT-------AAGGACAAAGAGGCGTCCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................TCACATT---CAGAACGCGGATTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.00520300000000000000
.......................TTCACATT---CAGAACGCGGATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000011000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---AT-------AAGGACAAAGAGGCGT..1911.00101000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCCTAACCAAA--TTTTACTT.................................................................2111.00100000100000000000
..............TGGAGCACGTTCACATT---CAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TATGAAGAACCAACGTTA-------ACT...........................................................................................................................................................................................................2111.00110000000000000000
.CTGACCCCTTCTCTGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATG---AT-------AAGGACAAAGAGGCGTC.2511.00101000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAACGTTAATG---AT-------AAGGAC............2111.00110000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAATG---AT-------AAGGACAAAGAG......2111.00100100000000000000
.........TTCTCTGGAGCACGTTCACAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATG---AT-------AAGGACAAAGAGGC....2111.00100000010000000000
droSec2
GCTGACCCCTTCTCTGGAGCACGTTCACATT---CAGAACGCGGATTCAGCGGGTGAGCAAAAACTTCCAAGCTAACCCATAAA----------------CTATAGTTCTC---------------------------------------------------------------CTTCTTC---ACTA-TTA---------------------------------------------ATA-----------------------------------T-------------TACTCGCTATTAAAATCTTGTTTCGCTTA------------------------CG----TGAAAATTGTCTTTGTAAAACCTAAAGGAAAAGTTTTGT-----------------------------------TTCTATATTAAAACATCAA-------------------------------------------------------------------AAATGTCCCCCCAAATGAAACCAACGCCTAACCAAA--TTTTACTTTTCAGCAGTCGAATCCAGAAAGGAG------AATG---AT-------AAGGACAAAGAGGCGTCCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAATCCAGAAAGGAG------AATG---...........................2011.0010010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAGAAAGGAG------AATG---AT-------AAGGA.............2411.0010100
..................................CAGAACGCGGATTCAGCGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
.........................CACATT---CAGAACGCGGATTCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGAAAGGAG------AATG---AT-------AAGGAC............2311.0010100
dm3
GCTGACCCCTTCACTGGAGCAAGTTCACATT---CAGAACGCGGATTCAGCGGGTGAGCAAAAACTTCCAAGCTAACCCATAAA----------------CAATAGTTCTT---------------------------------------------------------------CTTCTTCCTCAC------------------------------------ATA----------------------------------------------------------------TACTCGCTATTATAATGTGTTTTCTTTTA------------------------CG------AAAA---------TAAAATCTAAAGAAAAAGTTTTGTTTATGAAGAACCAACGTTA-------ACTAAATATTTCTATATTAAAACATCAACTAAGCT---ATATAGAACTATGA-TTTTGT--------------AGTTATCATAATTTTTTATAGAAAATTTCCCCCTAAATGAAATCAATGCCTAACCCAA--TTTTACTTTTTAGAAGGCGAATCCAGCAAGGAGAACGTTAATG---AT-------AAGGACAAAGAGGCGTCCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACGTTAATG---AT-------AAGGA.............1916.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTTAATG---AT-------AAGGACAAAG........2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATG---AT-------AAGGACAAAGAGGCG...2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000110000000000010000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACGTTAATG---AT-------AAGGACA...........2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGAACGTTAATG---AT-------AAGGA.............2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACGTTAATG---AT-------AAGGACAA..........2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................ATT---CAGAACGCGGATTCAGCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000100000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAGAACGTTAATG---AT-------AAGGAC............2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAGCAAGGAGAACGTT..................................1912.0020000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATG---AT-------AAGGACAAAGAGGC....2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000100000
..................................CAGAACGCGGATTCAGCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
...................................AGAACGCGGATTCAGCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAATG---AT-------AAGGACAAAGA.......2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGAATCCAGCAAGGAGAAC.....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TGGAGCAAGTTCACATT---CAGAACGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATCAACTAAGCT---ATATAG..................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGTTAATG---AT-------AAGGACAAAG........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAGCAAGGAGAACGTTAAT...............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-TTTTGT--------------AGTTATCATAA..........................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATG---AT-------AAGGACAAAGAG......1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCGAATCCAGCAAGGAGAA......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTTAATG---AT-------AAGGACAAAGAGGCGT..2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGAGAACGTTAATG---AT-------AAGG..............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.......................TTCACATT---CAGAACGCGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAAGGAGAACGTTAATG---A..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCGAATCCAGCAAGGAGAG......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................AGAACGCGGATTCAGCGGGTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TTCACTGGAGCAAGTTCACATT---CAGAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TA-------ACTAAATATTTCTATAT.............................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................ATCTAAAGAAAAAGTTTTGTT.......................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
..........TCACTGGAGCAAGTTCACATT---CAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATG---AT-------AAGGACAAAG........1811.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................AAA---------TAAAATCTAAAGAAAAAGT.............................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAACGTTAATG---AT-------AAGGACAAAGA.......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATG---AT-------AAGGACAAAGAGGCGTCC2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTTAATG---AT-------AAGGACAAAG........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGCGAATCCAGCAAGGAGA.......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCGAATCCAGCAAGGAGAACGT...................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGGAGAACGTTAATG---AT-------AAGGA.............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTATAGAAAATTTCCCCCTAAA................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CACATT---CAGAACGCGGATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTTAATG---AT-------AAGGACAAAGA.......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTTAATG---AT-------AAGGACAAA.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAGCAAGGAGAACGTTAATG---AT-------AAGGA.............2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................ATTCAGCGGGTGAGCAAAAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGTTAATG---AT-------AAGGACAA..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATG---AT-------AAGGACAAAGAGGCGTC.2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGAACGTTAATG---AT-------AAGGA.............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................ATT---CAGAACGCGGATTCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AGCAAGTTCACATT---CAGAACGCGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCGAATCCAGCAAGGAGAACG....................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGCGAATCCAGCAAGGAGAAC.....................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TT---CAGAACGCGGATTCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
droEre2
GTTGACCCCTTCGCTGGAGCAAGTTCAGCTT---AAGGACCCGGATTTAGCGGGTGAGCAAAAACTCCCAAGCTAACACGTAAA----------------CAATAGTTCTTCAAATGAAGTCGTTAAAAAGGAATCAAGCTTATTAATTGCCTCAATCACAGTTGATCA----------------C------------------------------------CTA----------------------------------------------------------------TACTTGCTATA---------------------------------------------------------------------------------TTTTGCTTATCAAGAACCAACGTTA-------ACTGAATATTTCTATAATAAAATGTCGATTTAGCTCCGATAT---ACCAAGAATTTAGT--------------------CATAATTTT--ATGC-AA--GTTTACCCTAATGAGAGCA-CGCCTAACC-AA--TTTTACTTTTCAGCAGCCGAGTCCAGCAAGGAGAAAGTTAATG---AT-------AAGGACAAAGAGGCGTCGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................T---AAGGACCCGGATTTAGCGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
droYak3
GCTGACCCCTTCGCTGGAGCAAGTTCATCTT---AAGGACCCGGATACAGCAGGTGAGCAAGACGTCCCAAGCTAACCCTTAAA----------------TAATAGTTCTTCAA---AAGTCATTA---AGGAATCAATCTTAGAAATGAACTCAATCACAGTTGATCA----------------C------------------------------------CCG------------CTA-----------------------------------T-------------CACTCGCTATTATAGTCTAGTTTCTTTTA------------------------CG------------------------------------------TTTATCAAGAACTAACGTTG-------ACTGAACATTTCTGTATTAAAACTGCA-----------ATAA---ACGAAGAGTTTTGTCTGAGAATTACAATAATCATCATTTTTGTATATAA-AAATTTGTACCCTAATGAAAGCAACGCCTAACC-AA--TTCTACTTTTTAGCAGCCGAGTCCAGCAAGGAGAAAACTAATG---AT-------AAGGACAAAGAGGCGGGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTTTGTCTGAGAATTACA.......................................................................................................................................2111.00101000000000
...................CAAGTTCATCTT---AAGGACCCGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
...GACCCCTTCGCTGGAGCAAGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTAATG---AT-------AAGGACAAAGAGGC....2611.00100000010000
.........................................................................................................................................................................................................................................................................................................ATTATAGTCTAGTTTCTTTTA------------------------CG------------------------------------------TT.......................................................................................................................................................................................................................................2511.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAGGAGAAAACTAAT...............................1811.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-AAATTTGTACCCTAATGAAAGCA........................................................................................2511.00100100000000
droEug1
ACTGACCCCATCACTGGAGCAGGTTCAACTT---AAAGATACCGATTCAACAGGTAAGCGAGTTGT--TA--------------------------------------------------------AACTAAAATCTT-----------A----TCTTATAGTTGATCGCTTTGATTTCAATTCAT------------------------------------AAA----------------------------------------------------------------CAAAGACTATATAAATATATTTCCTTATAATAATAAGTGATTTGTAATTTAGATTTAAGTGAAA--TGCCAAAGTAAAAATAAA---------------------CAAAGCATTCACTATAAGA------ATTTTAACTTCATAGACTTTAA-------------------------------------------------------------------AACTGTCATCTAAAATTAAAGAG-TATTTTTACTAATATCATATATTTTAGCGGATGACTTTTGCAAGGAT------AAGG---AT-------AAGGACAGAGTCGATTCASizeHit CountTotal NormTotal
No Reads
droBia1
ACTGAGCCCCACGCTGGAGCAAGTGCAGCTT---AAAGACAAGGATGTTGCAGGTAAGGGTAAGCTACAAAGACATTTCCCGAG----------------CGGTAA--------------------ACTCAAACTTTG-----------A----ACCC----------------CTACTTT---AATGAGTAACGTGTACAACTAACTACATGCAAATATCGAAACAAATATTTTAAATAATACCTGACTTTATTAAGTCCAAGGATAACTTTTTCATCTGGCCATTAAATGTGGTTTTTGTAGCGAGTTCT---------------------TAATTCCTATG------CAAT---------TAAAAAGCAAGTAACAAAATT---ACATGAAGAGGCCACCCAATTCAAGA---------------------------A-------------------------------------------------------------------AACCCTTTTTAAATAC-AAAACAATACTGATTCTAATTTCATACATTTTAGCGTCCGACACGGTTCAGGAGAAGGATGATG---AT-------AAGGACAAAGAGGCGT--SizeHit CountTotal NormTotal
No Reads
droTak1
TCTGACCCCTTCGCTGGAGCAGGTGCAGCTA---AATGACACGGATTTAGCAGGTAAGCGCAAACGTCCAAGTTATTCCACAAAAAAGTAGTTTTGACAACTCTAAATCTC---------------------------------------------------------------CTAATCA---AAGG-TCA---------------------------------------------AAA-----------------------------------T-------------AATACGTTTTTCAAATC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
ATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACATTCCAGCGGCAGATTCCGGCAAGGAAGAGGATAATG---GTAAGGAG-CAGGAAAAGGAGGCGACGSizeHit CountTotal NormTotal
No Reads
droRho1
GCTGACCCCCTCGCTGGAGCAGGTGCAGCTA---AAGGACACGGATTCAGCAGGTGAGCGCTTACTCCCCGGCCATTTCACAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
GCTGACCCCTTCGTTGGAGCAGGTGCAGTTG---AAAGAACCGGATTCAGGAGGTGAGTCATAGGTGCCCAGTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TTTTATTTTTTAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCAGGAAAAGGAGGAGG---AT-------AAGGACAAGGAGACCGCTSizeHit CountTotal NormTotal
No Reads
droAna3
A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGAAGGATAACG---AT-------TCGAACAAGGATGCGACGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGATAACG---AT-------TCGAAC............1911.001010000
droBip1
ACTGGCGCCGTCGCTGGAACGAGTGCAATTA---GAGGACAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
GATAACTACATCGCCTGAACAATCAGAGTCCCGGGAGAGCGCAGCCTCCACGGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................AACAATCAGAGTCCCGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
GATAACTACATCGCCTGAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
droPer2
GATAAGTACATCGCCTGAACAATCAGAGTCCCGGGAGAGCGCAGCCTCCACGGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........CATCGCCTGAACAATCAGAGTCCCGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
........CATCGCCTGAACAATCAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
droWil2
AGACACGCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droGri2
CAGCAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCCGAGA-CGACAACAAC------AACAATAAC----AATA---GC--AGCGACGACASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 06:24 PM