ID:

dsi_22292

 Coordinate:

3l:14621358-14621507 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.9 -15.9 -15.7

Flybase annnotation

CDS [3l_14621548_14621845_+]; five_prime_UTR [3l_14621023_14621547_+]; exon [3l_14621023_14621845_+]

No Repeatable elements found

Sense Strand Reads

##########################################################################################################################################################################################################################################################
AAACGAACTGAACTGTATTGGAAGCTCCACGCTGGCACATGTGTAGTGTGTGCTGATAAAAAAAAAAAGACACCGAGAAAAGTACAAGAAACCCCCAATAAAAGCAATGGACTTGTGTACATAACGACGGCCAGTCAGTGTAAATCGGAAAAGTTACCCTATAACAGCATACAAATTCAAAAGGTATTCCGTATTCCAAGAACCACCCATAAAAAACGTCGCACATCTTCCGAGCAAAAAATGGCGCGAG
**************************************************(((((.((..............((((......((((((...((...............)).))))))(((((...(((.....))).)))))..)))).............)).))))).............((....))..........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M023
head
 M025
embryo
 SRR553487
NRT_0-2 hours eggs
.....AACTGAACTGTATTGGAAGCT................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0
..........................................................................................................................AACGACGGCCAGTCAGTGTAAATCGGAA.................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................TAAAAAACGTCGCACATCTTCCGAGC............... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................................................................AAATCGGAAAAGTTACCCTATAACAGC.................................................................................. 27 0 1 1.00 1 0 0 1 0 0 0 0 0
...................................................................................................................................CAGTCAGTGTAAATCGGAAAAGTTACCC........................................................................................... 28 0 1 1.00 1 0 0 0 0 0 1 0 0
............................................................................................................GGACTTGTGTACATAACGACGGCC...................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 1 0
...........ACTGTATTGGAAGCTCCACGCTGG....................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0
..............................................TGTGGGCTGATAAAAAAA.......................................................................................................................................................................................... 18 1 2 0.50 1 1 0 0 0 0 0 0 0
..................................................TGCTGATAGAAAAAAAAA...................................................................................................................................................................................... 18 1 5 0.20 1 0 1 0 0 0 0 0 0
...........................................TAGTGGTTGTTGATAAAAAAAA......................................................................................................................................................................................... 22 3 7 0.14 1 0 0 0 0 0 0 0 1
...........................................................................................................TGGACTTGTGTGCATCACC............................................................................................................................ 19 3 20 0.10 2 2 0 0 0 0 0 0 0
...................GGAAGGTCCATGCTCGCAC.................................................................................................................................................................................................................... 19 3 10 0.10 1 0 0 1 0 0 0 0 0
................................................TGGGCTGTTAAAAAAAAAAA...................................................................................................................................................................................... 20 2 10 0.10 1 0 1 0 0 0 0 0 0
................ATTGGAAGCGCCACGCA......................................................................................................................................................................................................................... 17 2 11 0.09 1 0 0 0 1 0 0 0 0
..................................................TGCTGATAGAAAAAAA........................................................................................................................................................................................ 16 1 17 0.06 1 0 1 0 0 0 0 0 0
..................................................TGCTGATAGAAAAAAAAAAA.................................................................................................................................................................................... 20 2 20 0.05 1 0 0 0 0 1 0 0 0

Anti-sense strand reads

TTTGCTTGACTTGACATAACCTTCGAGGTGCGACCGTGTACACATCACACACGACTATTTTTTTTTTTCTGTGGCTCTTTTCATGTTCTTTGGGGGTTATTTTCGTTACCTGAACACATGTATTGCTGCCGGTCAGTCACATTTAGCCTTTTCAATGGGATATTGTCGTATGTTTAAGTTTTCCATAAGGCATAAGGTTCTTGGTGGGTATTTTTTGCAGCGTGTAGAAGGCTCGTTTTTTACCGCGCTC
**************************************************(((((.((..............((((......((((((...((...............)).))))))(((((...(((.....))).)))))..)))).............)).))))).............((....))..........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M025
embryo
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
 M023
head
.............................................................................................................................................................................................................................GTGTAGAAGGCTCGTTTTTTA........ 21 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................TAAGTTTTCCATAAGGCATAA....................................................... 21 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................................................GTCGTATGTTTAAGTT...................................................................... 16 0 3 0.67 2 0 2 0 0 0 0
....................................................................................................................................................................GTCGTATGTTTAAGT....................................................................... 15 0 3 0.67 2 0 2 0 0 0 0
......................................................................................................................................................................................CCAGAAGGCATCAGGTTCGT................................................ 20 3 4 0.25 1 0 0 1 0 0 0
.............................................................................................................................................................................................................................ATGTAGAAGGCTCGT.............. 15 1 5 0.20 1 0 0 0 1 0 0
..........................................................................................................................................................................................AAGGCATAAGGTTCTG................................................ 16 1 5 0.20 1 0 1 0 0 0 0
......................................................................................................................................................................................CCATCAGGCATCAGGTTCGT................................................ 20 3 8 0.13 1 0 0 1 0 0 0
..............................................................................................................................................................................................................................TGTACAAGGCTCCTCTTTTA........ 20 3 10 0.10 1 0 0 0 0 1 0
...................................................................................................................ACATGTATCGCTGCCCGC..................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:14621308-14621557 + dsi_22292 AAACGA------------ACTGAACTG---TATTGG-AA--------------------GCTCCACGCTGGCACAT-------GTGTAGTGTGTGCTGATAAAAAAAAA--------------A-AG---------ACACC--------------------GAGAAAAGTACAAGAAA---------------------------------------------------------------------------CCCC-------------------------------------------------------CAATAAAAGCAATGGACTTGTGTACATAACG-----------------------A----------------------------------CGGCCAGTCA---------------------------------------GTGT--AAATCGGAAAAGTTACCCTATAA---------------------------CAGCA------------TACAA---------------------------------ATTC------------------AAAA-------------G-GTATTCCGTATTCCAAGAACC---ACC-CAT----AAAA----AACGTCGCA--------------------CAT----------CTTCC----------------------GAGCA-AAAAATGGCGCGAG
droSec2 scaffold_0:7097247-7097494 + AAACGA------------ACTGAACTG---TATTGG-AA--------------------GCTCCACGCTGGCACAT-------GTGTAGTGTGTGCTGATAAAAAAAA-----------------AG---------ACACC--------------------GAGAAAAGTACAAGAAA---------------------------------------------------------------------------CCCC-------------------------------------------------------CGATAAAAGCAATGGACTTGTGTACATAACG-----------------------A----------------------------------CGGCCAGTCA---------------------------------------GTGT--AAATCGGAAAAGTTACCCTATAA---------------------------CAGCA------------TACAA---------------------------------ATTC------------------AAAA-------------C-GAATTCCGTATTCCAAGAACC---ACC-CAT----AAAA----AACGTCGCA--------------------TAT----------CTTCC----------------------GAGCA-AAAAATGGCGCGAG
dm3 chr3L:14980807-14981061 + AAACGA------------ACTGAACTG---TATTGG-AA--------------------GCTCCACGCTGGCACAT-------GTCTAGCCTGTGCTGATAAAAAAAAA----------------GAAAAC----GAAACC--------------------GAGAAAAGTACGAGAAA---------------------------------------------------------------------------CCCC-------------------------------------------------------CGATAAAAGCAATGGACTTGTGTACATAACG-----------------------A----------------------------------CGGCCAGTCA---------------------------------------CTGT--AAATCGGAAGAGTTACCCTATAA----------------A----------AATCA------------TAAAA---------------------------------ATTC------------------AAAA-------------A-ATATTCCGTATTCCAAGAACC---ACC-CAT----AAAA----AACGCCGCA--------------------CAT----------CTCCC----------------------GAGCA-AAAAATGGCGCGAG
droEre2 scaffold_4784:14937467-14937698 + AAGCGA------------ACTGAACTG---TATTCG-AA--------------------GCTCCACGCTGGCACAC-----------AGAGTGTGCTGATACAGAAGGA---------------------------AAAGC--------------------GAGAAAAGTACAAGGAA---------------------------------------------------------------------------ACCC-------------------------------------------------------CGATAAAAGCAATGGACTTGTGTACATAACG-----------------------A----------------------------------CGGCCAGCCG---------------------------------------CAGT--GAATCTCAAAAGTTACCCCATAA---------------------------CAGCAC--------------AA---------------------------------ATTC------------------AAAA-------------G-GT-------GTTCTAAGAACC---AGC-CTT----AAAA----AACGCGGCA--------------------CATCT--------ACGGC--------------------------G-AAAAATGGCGCGAG
droYak3 3L:15069535-15069769 + AAACGA------------ACTGAACTGCGGTATTTG-AA--------------------GCTCCACGCTGGCACAC-----------AGAGTGTGCTGATAAAAGAA------------------------------AACT--------------------GAGAAAACTACAAGAAA---------------------------------------------------------------------------ATCC-------------------------------------------------------CGATAAAAGCAATGGACTCGTGTACATAACA-----------------------A----------------------------------CGGCCAGCCA---------------------------------------CAGTAAAAATCGCAAAAGTTACCCCATAA---------------------------CAGCAT--------------AA---------------------------------ATTC------------------AAAA-------------G-GT-------ATTCGAAGAACC---ACC-CAT----AAAA----ACCGCCGCA--------------------CAT----------CGCTC----------------------GA-CA-AAAAATGGCGCGAG
droEug1 scf7180000409177:337222-337459 - AAACGA------------AGTGAACTG---TATTCG-AA--------------------GCTCCACGCTGGCATAA-----------AGAGTGTGCTGATAAAAATAA---AATAA----G---A--AAAGATTAAAATTC--------------------GAGAAAAGTACAAGGAA---------------------------------------------------------------------------ACCC-------------------------------------------------------CGATAAATGCAATGGACTTGTGTACATAAAA-----------------------A------------------------------------AACAGTCA---------------------------------------TAAT--AAATCGGAAAAGTTACCCTAAAA-----------------------------ATAT------------------------------------------------------------------------------AAACCTCAAAGGGT---------TATAGCATCA---ACA-CAT----TTTA----AAAA----TCA------------------TTT----------TTATC--------------------------A-AAAAATGGCGCGAG
droBia1 scf7180000302428:4901699-4901919 - GAGCCA------------ACTGAACTG---TATTCG-AA--------------------GCTCCACGCTGGCACAA-----------AGAGTGAGCTGATAAAAAA-------------------------------AACC--------------------GAGAAAACTGCAAGAAA---------------------------------------------------------------------------ATCC-------------------------------------------------------CCATAAAGGCAATGGACTTGTGCACATAAAT-------------------------------------------------------------CCAGCCC---------------------------------------TAAC--AAACCGTGAAAGTTACCCCAAAA---------------------------A-ATAT--------------AA---------------------------------TT-----------------------------ACACTAAAGGGT---------TATAGGAACA---A----------AGAAAA--AGCCACATCCA------------------AAT----------ATTCC--------------------------C-AAAAATGGCGCGCG
droTak1 scf7180000415149:25230-25453 - AAACGA------------ACTGAACTG---TATTCG-AA--------------------GCTCCACGCTGGCACA---------------GTGTGCTGATAAAGAAGAA----------------A-----------AACC------------------AAGAGAAAAGTACAAGAAA---------------------------------------------------------------------------ACCC-------------------------------------------------------CGATAAAAGCAATGGACTAGTGTACATAAAA-----------------------A-------------------------------------CCAACCA------------------------------------AACCAAA--AAATCGAAAAAGT-ACCCTAAA----------------------------CAGTAG------------------------------------------------------------------------------AAAACCCAAAGGGT---------TTCAAGAACA---ACC-CGT----AAAG--CAAAC-----CCA------------------AAA----------ATATT--------------------------T-AAAAATGGCGCGCG
droEle1 scf7180000491000:258013-258268 + AAACGA------------ACTGAACTG---TTTTCG-AA--------------------GCTCCACATCACCACAA-----------AGAGTGCGCTGATAAAAAAC---ACAAAA----A---------------AAAAAACAAAAAAAAAAAAAACGACGAGAAAATTACAAGAAA---------------------------------------------------------------------------ACCC-------------------------------------------------------CGATAAAAGCAATGGACTTATGTACATAGAA-----------------------A-------------------------------------CCAACCA---------------------------------------CAGT--AAATCGGAAAAGTTACCTTAAAC--------------AAA----------AATTAT------------------------------------------------------------------------------AAATCATAAAGGGT---------TTTTTTTGCT---TGCCCAT----ACAA----CTCATCACA--------------------TAT----------ATCCT--------------------------GAAAAAATGGCGCGCG
droRho1 scf7180000773812:21512-21739 + AATCGA------------ACTGAACTG---TATTCG-AA--------------------GCTCCACATCAGCACAA-----------AGAGAGTGCTGAATAAAAAAAA----------------AA---------AAACA--------------------GAGAACAGTTCATGAAA---------------------------------------------------------------------------ACCC-------------------------------------------------------CGATAAGAGCAATGCACTTAATTACATAAAA-----------------------A-------------------------------------CCAACCG---------------------------------------CAAA--AAATCGGAAAAGTTATCTTAAAA---------------------------A--AT------------------------------------------------------------------------------TAAATCCTTAGGGGT---------CCTAGGAACT---ACC-CCA----ACCA----CTCAACATACA------------------CAT----------ATCCT--------------------------G-AAAAATGGCGCGCG
droFic1 scf7180000453807:437717-437935 + AAACGA------------ACTGAACTG---TATTTG-A---------------------GCTCCACGCTGGCATAA-----------AGAGTGTGCTGATAAAAAAA------------------------------AACG--------------------GAGAAAAGTACAAGAAG---------------------------------------------------------------------------ACCC-------------------------------------------------------CGATAAAAGCAATGGTCTTACATAA----AT-----------------------T-------------------------------------CA------------------------------------------------------------AATTGCTTTAAAT--------------ACA----------AACC----------------AA--------------------------------ATTTA------------------AATAAATAAACCCTAGAGGGT---------TCCGAGAACAATAACC-CAA----TTAA----AACACTACACA------------------TAC----------ATCCT--------------------------G-CAAAATGGCGCGAG
droKik1 scf7180000302383:1137045-1137389 + AACCGA------------ACTGAACTG---TATACG-AA--------------------GCTCCACGCTGGCACAG-----------AGAGAACGCTGATAAAAAAT---ATACAACAAA----C--TCA----------A--------------------GACAAAACCA-ATGTTTAAACCAAGATAAAATATAAAAAAATAAATAAAAATTCAGAGAAGCAAATCTGTAAAGTGAGAACCTTGAAAGGAGAGCCAGGATCAACCTAAATATCACCAAAAATAAAAACACAAAAAGTGCCCAAATATCAAAGCTACAAGCAATGAACTTAACTAAAA-ACC-----------------------TGTATCAATAAATAAACAATAAAAAATATATTAAAATAAAT------------------------------------------------------------------------------------------------------AC------------------------------------------------------------------------------CAGATCCTT-------------------GAT---------------------------CCTCGCT--------------------CAA------CAATATCCC-A------------------------A-AAATATGGCTCGCG
droAna3 scaffold_13337:16133533-16133793 - AAACGA------------ACTGAACTC---TATTCG-AA--------------------GCTCCACGCTGGCACCC-----------CAAGCACGTTGATAAAAAAAAACAAAAAA----T---A--AAA----------A--------------------GCGAAAACCA-AAGAAT---------------------------------------------------------------------------ACCC-------------------------------------------------------CGATAAAAGCTATGGGCTTGTGTTCATAAAA-----------------------T--------------------------AAATA---GAAACAAAAA---------------------------------------CAGC--AAACCGGGAAAATTACCATAAG-------------------------------TAT------------A--------------AAAAACAAATAAAAAAAAAAAACTTA------------------AAAAAGGAAACCATATACGGA---------GCTATATA---------------------------GTAGTA--------------------C-----GGAAAATATCGC--------------------------G-AAAAATGGCGCGCA
droBip1 scf7180000396589:300176-300415 + AAACGA------------ACTGAACTC---TATTCG-AA--------------------GCTCCACGCTGGCACAC-----------CAAGCACGTTGATAAAAAAC---AGACAA----C---A--AAA----------A--------------------ACGAAAACCAAAGAATA---------------------------------------------------------------------------CCCC-------------------------------------------------------CGATAAAAGCTATGAACTTGTGTACATAAAA-----------------------AAC------------------------AAATACAAAAAACAACC-------------------------------------------A--AAACCGGGAAAATTATCATAAAA---------------------------A-ATAGAGAATATTGTACGTAA---------------------------------ATTC------------------AAAA-------------G-G-------------------A---AAC-CAT----ATAG----TACGGAAA----------------------AA----------ATCGC--------------------------G-AAAAATGGCGCGAA
dp5 XR_group6:755094-755406 - AAATAA------------AAAGAACTG---TATTCG-AATCGA--CGGACGAGCTCCACGCTCCACGCTGGCACAGA--GCACGCTGAAACCGTGCTGATACGCAAG---ATCCCACTGG----A--A-------------------------------------------------------------------------------------------------------------------------------AA-------------------------------------------------------CGATAAAAGCAATGGTCTTACAAAA----GCTAACATAAAAATAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATAATAATAAAAC-------AAAAACAAAAAC--CAATAACCATCGCTGAGAGAAACAGGAACCCCTAGAGGGA---------TTCAAGAACCCTACC-TTACCCTT--------AACCCTACCAGCAACCCCTAACTCAAGTCTCT----------GTCTTGAGAGAACCCAAAACCAAAGTTGTGTG-TAAAATGGCGCGTA
droPer2 scaffold_12:1439685-1439994 - AAATAA------------AAAGAACTG---TATTTG-AATCGA--CGGACGAGCTCCACGCTCCACGCTGGCACAGA--GCACGCTGAAACCGTGCTGATACGCAAG---ATCCCACTGG----A--A-------------------------------------------------------------------------------------------------------------------------------AA-------------------------------------------------------CGATAAAAGCAATGGTCTTACAAAA----GCTATCATAAAAATAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAA---TAATAAAAC-------AAAAACAAAAAC--CAATAACCATCGCTGAGAGAAACAGGAACCCCTAGAGGGA---------TTCAAGAACCCTACC-TTACCCTT--------AACCCTACCAGCAACCCCTAACTCAAGTCTCT----------GTCTTGAGAGAACCCAAAACCAAAGTTGTGTG-TAAAATGGCGCGTA
droWil2 scf2_1100000004949:331319-331538 - AAACACAACAACACGAGATAAAAATTG---TATTTG-AAACGTTCCAAATAA-------TATTCACGCTGGCACTA-------GAAGGCGGTGCACTGAAAA-------------------------------------CT--------------------AAG-------------------------------------------------------------------------------------------AA-------------------------------------------------------CGATAAAAGCAATGAAATTATATGAATAACC-----------------------TATAC--ATA---------------------------AATAGATA---------------------------------------AAAA--AAAACG----AGTTGAAATTAAA----------------A----------AAAAA------------------------------------------------------------------------------TAAATCTTTAAGA----------------------------------------------AGCGCT--------------------TAGTTTAGGCAAAATCAC-A------------------------A-AAACATGGCGCGAG
droVir3 scaffold_13049:17753672-17753951 - AAAGTAA--AAC------ACAAAATTG--------A-ACTTCT--TATACGA-------GATCCACGCTGGCAGTGA--GCGCGCCGCGCGCAGACTGATAAATATA---GGAGAA----AAAA-AA---------ATACG--------------------------AATAAAAGGAA---------------------------------------------------------------------------A-CA-------------------------------------------------------TGATA---------------CATGA----ACCGTCAGAAAAATAAACATATTTAA-C------------------------AATTA----------------AAGAACTCAACCAAAG-GACCAATTTATAACCAATT------------------------TAAAAATATCAACACAAACGAGCAACTCTCCAA-ATATCTCATATTGTCAATTG---------------------------------A------------------------------------------------------------------------------------CTCTTGAT--------------------TAC----------GAAGCGC---------A------AA--GAG-T-AAAAATGACACGAA
droMoj3 scaffold_6680:22812448-22812703 - AAACTAA--AAC------TCGAAATTG---TGCTTGAAA--------------------GATCCACGCTGGCAGTGCAAGTGCGGAGAGCGCAGGCTGATAAAGAAATC--------------A-AA---------ATACC--------------------AA----ATTGAAAAGA----------------------------------------------------------------------------AAAA-------------------------------------------------------CGATAAAATTAGTGAGCATAAATATACGTAT----------------------AA----------------------------------CAGTTTATTTTCGAGGATCTTAACCAAAGGGGCCAATTTGTGGCAAAGC------------------------CAAATATTCGAAAACAA---AGTAATTTACTAA-ATATCTTA---------------------------------------------------------------------------------------------------------------------------------CCTCCTGCA--------------------TTC----------GTGTCGA------------------------A-AAATATGACACGCA
droGri2 scaffold_14906:2496157-2496204 + AAAAAA------------AAA--------------------------------------------------------------------------------------A-----------------AA---------AAAAT--------------------GGAAAAAATAGAAGAAC---------------------------------------------------------------------------TACG-------------------------------------------------------AAATAAAAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AAACGA------------ACTGAACTG---TATTGG-AA--------------------GCTCCACGCTGGCACAT-------GTGTAGTGTGTGCTGATAAAAAAAAA--------------A-AG---------ACACC--------------------GAGAAAAGTACAAGAAA---------------------------------------------------------------------------CCCC-------------------------------------------------------CAATAAAAGCAATGGACTTGTGTACATAACG-----------------------A----------------------------------CGGCCAGTCA---------------------------------------GTGT--AAATCGGAAAAGTTACCCTATAA---------------------------CAGCA------------TACAA---------------------------------ATTC------------------AAAA-------------G-GTATTCCGTATTCCAAGAACC---ACC-CAT----AAAA----AACGTCGCA--------------------CAT----------CTTCC----------------------GAGCA-AAAAATGGCGCGAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....A------------ACTGAACTG---TATTGG-AA--------------------GCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
...................................................................................................................................................................................................................................................................................................................................................AACG-----------------------A----------------------------------CGGCCAGTCA---------------------------------------GTGT--AAATCGGAA.............................................................................................................................................................................................................................................................................2811.00100000001000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----AAAA----AACGTCGCA--------------------CAT----------CTTCC----------------------GAGC................2611.00100000000010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCGGAAAAGTTACCCTATAA---------------------------CAGC................................................................................................................................................................................................................................2711.00101000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................CAGTCA---------------------------------------GTGT--AAATCGGAAAAGTTACCC....................................................................................................................................................................................................................................................................2811.00110000000000000000
.....................................................................................................................................................................................................................................................................................................................................GGACTTGTGTACATAACG-----------------------A----------------------------------CGGCC........................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
.......................ACTG---TATTGG-AA--------------------GCTCCACGCTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
droSec2
AAACGA------------ACTGAACTG---TATTGG-AA--------------------GCTCCACGCTGGCACAT-------GTGTAGTGTGTGCTGATAAAAAAAA-----------------AG---------ACACC--------------------GAGAAAAGTACAAGAAA---------------------------------------------------------------------------CCCC-------------------------------------------------------CGATAAAAGCAATGGACTTGTGTACATAACG-----------------------A----------------------------------CGGCCAGTCA---------------------------------------GTGT--AAATCGGAAAAGTTACCCTATAA---------------------------CAGCA------------TACAA---------------------------------ATTC------------------AAAA-------------C-GAATTCCGTATTCCAAGAACC---ACC-CAT----AAAA----AACGTCGCA--------------------TAT----------CTTCC----------------------GAGCA-AAAAATGGCGCGAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------TAT----------CTTCC----------------------GAGCA-AAAAATGGC.....2311.0010010
dm3
AAACGA------------ACTGAACTG---TATTGG-AA--------------------GCTCCACGCTGGCACAT-------GTCTAGCCTGTGCTGATAAAAAAAAA----------------GAAAAC----GAAACC--------------------GAGAAAAGTACGAGAAA---------------------------------------------------------------------------CCCC-------------------------------------------------------CGATAAAAGCAATGGACTTGTGTACATAACG-----------------------A----------------------------------CGGCCAGTCA---------------------------------------CTGT--AAATCGGAAGAGTTACCCTATAA----------------A----------AATCA------------TAAAA---------------------------------ATTC------------------AAAA-------------A-ATATTCCGTATTCCAAGAACC---ACC-CAT----AAAA----AACGCCGCA--------------------CAT----------CTCCC----------------------GAGCA-AAAAATGGCGCGAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................................................................................................................................................................................................................................................................................................GATAAAAGCAATGGACTTGTGT...............................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................T-------GTCTAGCCTGTGCTGATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................ATGGACTTGTGTACATAACG-----------------------A----------------------------------.............................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TG---TATTGG-AA--------------------GCTCCACGCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................AGCAATGGACTTGTGTACATAACG-----------------------................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................ACGCTGGCACAT-------GTCTAGCCTGTGCTGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................AAAA----------------GAAAAC----GAAACC--------------------GAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GAACTG---TATTGG-AA--------------------GCTCCAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................CGGCCAGTCA---------------------------------------CTGT--AAATCGGAAGA...........................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................ATGGACTTGTGTACATAACG-----------------------A----------------------------------CG...........................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TATTGG-AA--------------------GCTCCACGCTGGCACAT-------GT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................ACTGAACTG---TATTGG-AA--------------------GCTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
.....A------------ACTGAACTG---TATTGG-AA--------------------GCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................CAGTCA---------------------------------------CTGT--AAATCGGAAGA...........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC---ACC-CAT----AAAA----AACGCC...................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................TACGAGAAA---------------------------------------------------------------------------CCCC-------------------------------------------------------CGATAAAAGCAATG........................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................ATAAAAGCAATGGACTTGTGTAC.............................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................CAATGGACTTGTGTACATAACG-----------------------A----------------------------------C............................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................ATTGG-AA--------------------GCTCCACGCTGGCACAT-------GTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAA---------------------------------ATTC------------------AAAA-------------A-ATATTCCGTATTCC......................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................TAAAAGCAATGGACTTGTGTACATAACG-----------------------................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................TAAAAGCAATGGACTTGTGTAC.............................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTATTCCAAGAACC---ACC-CAT----AAAA----.........................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGTATTCCAAGAACC---ACC-CAT----AAAA----.........................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................GATAAAAGCAATGGACTTGT.................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................G---TATTGG-AA--------------------GCTCCACGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........................................................................................................................................................................................................................................................................................................................CGATAAAAGCAATGGACTTGTGTACA............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AAACGA------------ACTGAACTG---TATTGG-AA--------------------G..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TTGG-AA--------------------GCTCCACGCTGGCACAT-------GTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CGA------------ACTGAACTG---TATTGG-AA--------------------GT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CTG---TATTGG-AA--------------------GCTCCACGCTGGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................AATGGACTTGTGTACATAACG-----------------------................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TCA---------------------------------------CTGT--AAATCGGAAGAGTTACCC....................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................AGCAATGGACTTGTGTACATAACG-----------------------A----------------------------------.............................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................ACTGAACTG---TATTGG-AA--------------------GC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
..........................G---TATTGG-AA--------------------GCTCCACGCTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................ACTGAACTG---TATTGG-AA--------------------GCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
....................................................................................................AAAAAAAAA----------------GAAAAC----GAAACC--------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----------CTCCC----------------------GAGCA-AAAAATGG......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTC------------------AAAA-------------A-ATATTCCGTATTCCAAGAACC---............................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TGTGTACATAACG-----------------------A----------------------------------CGGCCAGTCA---------------------------------------............................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................AAAAAAA----------------GAAAAC----GAAACC--------------------GAGAAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AAACGA------------ACTGAACTG---TATTGG-.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................GTCTAGCCTGTGCTGATAAAAAAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................CCAGTCA---------------------------------------CTGT--AAATCGGA..............................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCAAGAACC---ACC-CAT----AAAA----AACGCC...................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAAGAACC---ACC-CAT----AAAA----AACGCC...................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GAACTG---TATTGG-AA--------------------GCTCCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
droEre2
AAGCGA------------ACTGAACTG---TATTCG-AA--------------------GCTCCACGCTGGCACAC-----------AGAGTGTGCTGATACAGAAGGA---------------------------AAAGC--------------------GAGAAAAGTACAAGGAA---------------------------------------------------------------------------ACCC-------------------------------------------------------CGATAAAAGCAATGGACTTGTGTACATAACG-----------------------A----------------------------------CGGCCAGCCG---------------------------------------CAGT--GAATCTCAAAAGTTACCCCATAA---------------------------CAGCAC--------------AA---------------------------------ATTC------------------AAAA-------------G-GT-------GTTCTAAGAACC---AGC-CTT----AAAA----AACGCGGCA--------------------CATCT--------ACGGC--------------------------G-AAAAATGGCGCGAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................................................................................................................................................................ATGGACTTGTGTACATAACG-----------------------A----------------------------------CGG..........................................................................................................................................................................................................................................................................................................................................2411.0011000000
................................................................................................TGATACAGAAGGA---------------------------AAAGC--------------------GAGAAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
droYak3
AAACGA------------ACTGAACTGCGGTATTTG-AA--------------------GCTCCACGCTGGCACAC-----------AGAGTGTGCTGATAAAAGAA------------------------------AACT--------------------GAGAAAACTACAAGAAA---------------------------------------------------------------------------ATCC-------------------------------------------------------CGATAAAAGCAATGGACTCGTGTACATAACA-----------------------A----------------------------------CGGCCAGCCA---------------------------------------CAGTAAAAATCGCAAAAGTTACCCCATAA---------------------------CAGCAT--------------AA---------------------------------ATTC------------------AAAA-------------G-GT-------ATTCGAAGAACC---ACC-CAT----AAAA----ACCGCCGCA--------------------CAT----------CGCTC----------------------GA-CA-AAAAATGGCGCGAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................GAACTGCGGTATTTG-AA--------------------GCTCCACGCTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................30114.0014000000000014
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAAGAACC---ACC-CAT----AAAA----.........................................................................................2011.00110000000000
.....................GAACTGCGGTATTTG-AA--------------------GCTCCACGCTGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.00100000000001
...........................CGGTATTTG-AA--------------------GCTCCACGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
droEug1
AAACGA------------AGTGAACTG---TATTCG-AA--------------------GCTCCACGCTGGCATAA-----------AGAGTGTGCTGATAAAAATAA---AATAA----G---A--AAAGATTAAAATTC--------------------GAGAAAAGTACAAGGAA---------------------------------------------------------------------------ACCC-------------------------------------------------------CGATAAATGCAATGGACTTGTGTACATAAAA-----------------------A------------------------------------AACAGTCA---------------------------------------TAAT--AAATCGGAAAAGTTACCCTAAAA-----------------------------ATAT------------------------------------------------------------------------------AAACCTCAAAGGGT---------TATAGCATCA---ACA-CAT----TTTA----AAAA----TCA------------------TTT----------TTATC--------------------------A-AAAAATGGCGCGAGSizeHit CountTotal NormTotal
No Reads
droBia1
GAGCCA------------ACTGAACTG---TATTCG-AA--------------------GCTCCACGCTGGCACAA-----------AGAGTGAGCTGATAAAAAA-------------------------------AACC--------------------GAGAAAACTGCAAGAAA---------------------------------------------------------------------------ATCC-------------------------------------------------------CCATAAAGGCAATGGACTTGTGCACATAAAT-------------------------------------------------------------CCAGCCC---------------------------------------TAAC--AAACCGTGAAAGTTACCCCAAAA---------------------------A-ATAT--------------AA---------------------------------TT-----------------------------ACACTAAAGGGT---------TATAGGAACA---A----------AGAAAA--AGCCACATCCA------------------AAT----------ATTCC--------------------------C-AAAAATGGCGCGCGSizeHit CountTotal NormTotal
No Reads
droTak1
AAACGA------------ACTGAACTG---TATTCG-AA--------------------GCTCCACGCTGGCACA---------------GTGTGCTGATAAAGAAGAA----------------A-----------AACC------------------AAGAGAAAAGTACAAGAAA---------------------------------------------------------------------------ACCC-------------------------------------------------------CGATAAAAGCAATGGACTAGTGTACATAAAA-----------------------A-------------------------------------CCAACCA------------------------------------AACCAAA--AAATCGAAAAAGT-ACCCTAAA----------------------------CAGTAG------------------------------------------------------------------------------AAAACCCAAAGGGT---------TTCAAGAACA---ACC-CGT----AAAG--CAAAC-----CCA------------------AAA----------ATATT--------------------------T-AAAAATGGCGCGCGSizeHit CountTotal NormTotal
No Reads
droEle1
AAACGA------------ACTGAACTG---TTTTCG-AA--------------------GCTCCACATCACCACAA-----------AGAGTGCGCTGATAAAAAAC---ACAAAA----A---------------AAAAAACAAAAAAAAAAAAAACGACGAGAAAATTACAAGAAA---------------------------------------------------------------------------ACCC-------------------------------------------------------CGATAAAAGCAATGGACTTATGTACATAGAA-----------------------A-------------------------------------CCAACCA---------------------------------------CAGT--AAATCGGAAAAGTTACCTTAAAC--------------AAA----------AATTAT------------------------------------------------------------------------------AAATCATAAAGGGT---------TTTTTTTGCT---TGCCCAT----ACAA----CTCATCACA--------------------TAT----------ATCCT--------------------------GAAAAAATGGCGCGCGSizeHit CountTotal NormTotal
No Reads
droRho1
AATCGA------------ACTGAACTG---TATTCG-AA--------------------GCTCCACATCAGCACAA-----------AGAGAGTGCTGAATAAAAAAAA----------------AA---------AAACA--------------------GAGAACAGTTCATGAAA---------------------------------------------------------------------------ACCC-------------------------------------------------------CGATAAGAGCAATGCACTTAATTACATAAAA-----------------------A-------------------------------------CCAACCG---------------------------------------CAAA--AAATCGGAAAAGTTATCTTAAAA---------------------------A--AT------------------------------------------------------------------------------TAAATCCTTAGGGGT---------CCTAGGAACT---ACC-CCA----ACCA----CTCAACATACA------------------CAT----------ATCCT--------------------------G-AAAAATGGCGCGCGSizeHit CountTotal NormTotal
No Reads
droFic1
AAACGA------------ACTGAACTG---TATTTG-A---------------------GCTCCACGCTGGCATAA-----------AGAGTGTGCTGATAAAAAAA------------------------------AACG--------------------GAGAAAAGTACAAGAAG---------------------------------------------------------------------------ACCC-------------------------------------------------------CGATAAAAGCAATGGTCTTACATAA----AT-----------------------T-------------------------------------CA------------------------------------------------------------AATTGCTTTAAAT--------------ACA----------AACC----------------AA--------------------------------ATTTA------------------AATAAATAAACCCTAGAGGGT---------TCCGAGAACAATAACC-CAA----TTAA----AACACTACACA------------------TAC----------ATCCT--------------------------G-CAAAATGGCGCGAGSizeHit CountTotal NormTotal
No Reads
droKik1
AACCGA------------ACTGAACTG---TATACG-AA--------------------GCTCCACGCTGGCACAG-----------AGAGAACGCTGATAAAAAAT---ATACAACAAA----C--TCA----------A--------------------GACAAAACCA-ATGTTTAAACCAAGATAAAATATAAAAAAATAAATAAAAATTCAGAGAAGCAAATCTGTAAAGTGAGAACCTTGAAAGGAGAGCCAGGATCAACCTAAATATCACCAAAAATAAAAACACAAAAAGTGCCCAAATATCAAAGCTACAAGCAATGAACTTAACTAAAA-ACC-----------------------TGTATCAATAAATAAACAATAAAAAATATATTAAAATAAAT------------------------------------------------------------------------------------------------------AC------------------------------------------------------------------------------CAGATCCTT-------------------GAT---------------------------CCTCGCT--------------------CAA------CAATATCCC-A------------------------A-AAATATGGCTCGCGSizeHit CountTotal NormTotal
No Reads
droAna3
AAACGA------------ACTGAACTC---TATTCG-AA--------------------GCTCCACGCTGGCACCC-----------CAAGCACGTTGATAAAAAAAAACAAAAAA----T---A--AAA----------A--------------------GCGAAAACCA-AAGAAT---------------------------------------------------------------------------ACCC-------------------------------------------------------CGATAAAAGCTATGGGCTTGTGTTCATAAAA-----------------------T--------------------------AAATA---GAAACAAAAA---------------------------------------CAGC--AAACCGGGAAAATTACCATAAG-------------------------------TAT------------A--------------AAAAACAAATAAAAAAAAAAAACTTA------------------AAAAAGGAAACCATATACGGA---------GCTATATA---------------------------GTAGTA--------------------C-----GGAAAATATCGC--------------------------G-AAAAATGGCGCGCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGGA---------GCTATATA---------------------------GTA...................................................................................1811.001001000
..............................................................................................................................................................................GAAT---------------------------------------------------------------------------ACCC-------------------------------------------------------CGATAAAAGCTATGGGCTTGT.................................................................................................................................................................................................................................................................................................................................................................................................................2911.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC--AAACCGGGAAAATTACC.....................................................................................................................................................................................................................................................................2011.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................A---GAAACAAAAA---------------------------------------CAGC--AAAG..................................................................................................................................................................................................................................................................................1970.141001000
droBip1
AAACGA------------ACTGAACTC---TATTCG-AA--------------------GCTCCACGCTGGCACAC-----------CAAGCACGTTGATAAAAAAC---AGACAA----C---A--AAA----------A--------------------ACGAAAACCAAAGAATA---------------------------------------------------------------------------CCCC-------------------------------------------------------CGATAAAAGCTATGAACTTGTGTACATAAAA-----------------------AAC------------------------AAATACAAAAAACAACC-------------------------------------------A--AAACCGGGAAAATTATCATAAAA---------------------------A-ATAGAGAATATTGTACGTAA---------------------------------ATTC------------------AAAA-------------G-G-------------------A---AAC-CAT----ATAG----TACGGAAA----------------------AA----------ATCGC--------------------------G-AAAAATGGCGCGAASizeHit CountTotal NormTotal
No Reads
dp5
AAATAA------------AAAGAACTG---TATTCG-AATCGA--CGGACGAGCTCCACGCTCCACGCTGGCACAGA--GCACGCTGAAACCGTGCTGATACGCAAG---ATCCCACTGG----A--A-------------------------------------------------------------------------------------------------------------------------------AA-------------------------------------------------------CGATAAAAGCAATGGTCTTACAAAA----GCTAACATAAAAATAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATAATAATAAAAC-------AAAAACAAAAAC--CAATAACCATCGCTGAGAGAAACAGGAACCCCTAGAGGGA---------TTCAAGAACCCTACC-TTACCCTT--------AACCCTACCAGCAACCCCTAACTCAAGTCTCT----------GTCTTGAGAGAACCCAAAACCAAAGTTGTGTG-TAAAATGGCGCGTASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....A------------AAAGAACTG---TATTCG-AATCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040400000000
..........................................A--CGGACGAGCTCCACGCTCCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
...............................................................CACGCTGGCACAGA--GCACGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020200000000
...TAA------------AAAGAACTG---TATTCG-AAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000200
.............................................CGGACGAGCTCCACGCTCCAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
.......................................................................................AAACCGTGCTGATACGCAAG---A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
..............................................................CCACGCTGGCACAGA--GCACGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020010100000
...................AAGAACTG---TATTCG-AATCGA--C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020100000100
.....................................................................................TGAAACCGTGCTGATACGCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
........................................CGA--CGGACGAGCTCCACGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020200000000
.............................................................................................TGCTGATACGCAAG---ATCCCACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020200000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCTGAGAGAAACAGGAACCCCTAG.......................................................................................................................................2612.0020200000000
................................TTCG-AATCGA--CGGACGAGCTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
........................................CGA--CGGACGAGCTCCACGCTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020100100000
.................................TCG-AATCGA--CGGACGAGCTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................ACTG---TATTCG-AATCGA--CGGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010000000
...TAA------------AAAGAACTG---TATTCG-AATA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
............................................................CTCCACGCTGGCACAGA--GCAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAAAGTTGTGTG-TAAAATGGCGC...2511.0010010000000
.........................................GA--CGGACGAGCTCCACGCTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
........................................................................ACAGA--GCACGCTGAAACCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACC-TTACCCTT--------AACCCTACCAGCA............................................................................2511.0010100000000
....................AGAACTG---TATTCG-AATCGA--CGGACGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000001
..................................CG-AATCGA--CGGACGAGCTCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................................................................CACAGA--GCACGCTGAAACCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100000
........................CTG---TATTCG-AATCGA--CGGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...................................G-AATCGA--CGGACGAGCTCCACGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
........................CTG---TATTCG-AATCGA--CGGACG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................................................................CACAGA--GCACGCTGAAACCGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100000
...................................................AGCTCCACGCTCCACGCTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..........................................A--CGGACGAGCTCCACGCTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...........................................................................................CGTGCTGATACGCAAG---ATCCCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..................................CG-AATCGA--CGGACGAGCTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAGAAACAGGAACCCCTG........................................................................................................................................2111.0010100000000
.....................................................................................TGAAACCGTGCTGATACGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...................................................................................GCTGAAACCGTGCTGATACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..............................................................................................GCTGATACGCAAG---ATCCCACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.AATAA------------AAAGAACTG---TATTCG-A........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..................................................................GCTGGCACAGA--GCACGCTGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..................AAAGAACTG---TATTCG-AATCGA--.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.........................................GA--CGGACGAGCTCCACGCTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
........................................................................ACAGA--GCACGCTGAAACCGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
......................................................................GCACAGA--GCACGCTGAAACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...............................ATTCG-AATCGA--CGGACGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100000
......................AACTG---TATTCG-AATCGA--CGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
......................................ATCGA--CGGACGAGCTCCACGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAACCATCGCTGAGAGAAACA..................................................................................................................................................2211.0010100000000
.....................................AATCGA--CGGACGAGCTCCAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACCAGCAACCCCTAACTC.................................................................2011.0010100000000
.....................................................................................TGAAACCGTGCTGATACGCAAG---ATCCCAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAAAAC--CAATAACCATCGC.............................................................................................................................................................2111.0010010000000
droPer2
AAATAA------------AAAGAACTG---TATTTG-AATCGA--CGGACGAGCTCCACGCTCCACGCTGGCACAGA--GCACGCTGAAACCGTGCTGATACGCAAG---ATCCCACTGG----A--A-------------------------------------------------------------------------------------------------------------------------------AA-------------------------------------------------------CGATAAAAGCAATGGTCTTACAAAA----GCTATCATAAAAATAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAA---TAATAAAAC-------AAAAACAAAAAC--CAATAACCATCGCTGAGAGAAACAGGAACCCCTAGAGGGA---------TTCAAGAACCCTACC-TTACCCTT--------AACCCTACCAGCAACCCCTAACTCAAGTCTCT----------GTCTTGAGAGAACCCAAAACCAAAGTTGTGTG-TAAAATGGCGCGTASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................ATACGCAAG---ATCCCACTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.003300000
........................................CGA--CGGACGAGCTCCACGCTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.003210000
........................................................................ACAGA--GCACGCTGAAACCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
.................................TTG-AATCGA--CGGACGAGCTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002110000
........................................CGA--CGGACGAGCTCCACGCTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002200000
.................................................................................ACGCTGAAACCGTGCTGATACGCAAG---................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002200000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCTGAGAGAAACAGGA...............................................................................................................................................1912.002200000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAGGGA---------TTCAAGAACCC..............................................................................................................1912.002200000
..............................................................................................GCTGATACGCAAG---ATCCCACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002020000
.........................TG---TATTTG-AATCGA--CGGACGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
......................................................................................................GCAAG---ATCCCACTGG----A--A-------------------------------------------------------------------------------------------------------------------------------AA-------------------------------------------------------CGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.............................................................TCCACGCTGGCACAGA--GCACG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...................................................................................................TACGCAAG---ATCCCACTGG----A--A-------------------------------------------------------------------------------------------------------------------------------AA-------------------------------------------------------CG....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
.........................................GA--CGGACGAGCTCCACGCTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
........................................................................ACAGA--GCACGCTGAAACCGTGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
........................................CGA--CGGACGAGCTCCACGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
................................TTTG-AATCGA--CGGACGAGCTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCTGAGAGAAACAGGG...............................................................................................................................................1911.001100000
................................................ACGAGCTCCACGCTCCACGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.................................TTG-AATCGA--CGGACGAGCTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTGAGAGAAACAGGAACCCCTAGAGGG...................................................................................................................................2911.001100000
...............................................................CACGCTGGCACAGA--GCACGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...................................................................................GCTGAAACCGTGCTGATACGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.......................ACTG---TATTTG-AATCGA--CGGACG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
droWil2
AAACACAACAACACGAGATAAAAATTG---TATTTG-AAACGTTCCAAATAA-------TATTCACGCTGGCACTA-------GAAGGCGGTGCACTGAAAA-------------------------------------CT--------------------AAG-------------------------------------------------------------------------------------------AA-------------------------------------------------------CGATAAAAGCAATGAAATTATATGAATAACC-----------------------TATAC--ATA---------------------------AATAGATA---------------------------------------AAAA--AAAACG----AGTTGAAATTAAA----------------A----------AAAAA------------------------------------------------------------------------------TAAATCTTTAAGA----------------------------------------------AGCGCT--------------------TAGTTTAGGCAAAATCAC-A------------------------A-AAACATGGCGCGAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................TCACGCTGGCACTA-------GAAGGCGGTGCAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
.........................................................................................GGTGCACTGAAAA-------------------------------------CT--------------------AAG-------------------------------------------------------------------------------------------AA-------------------------------------------------------CGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA----------------A----------AAAAA------------------------------------------------------------------------------TAAATCTTTAAGA----------------------------------------------AGC...................................................................................2411.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAATCAC-A------------------------A-AAACATGGCGCGA.2411.00100010
droVir3
AAAGTAA--AAC------ACAAAATTG--------A-ACTTCT--TATACGA-------GATCCACGCTGGCAGTGA--GCGCGCCGCGCGCAGACTGATAAATATA---GGAGAA----AAAA-AA---------ATACG--------------------------AATAAAAGGAA---------------------------------------------------------------------------A-CA-------------------------------------------------------TGATA---------------CATGA----ACCGTCAGAAAAATAAACATATTTAA-C------------------------AATTA----------------AAGAACTCAACCAAAG-GACCAATTTATAACCAATT------------------------TAAAAATATCAACACAAACGAGCAACTCTCCAA-ATATCTCATATTGTCAATTG---------------------------------A------------------------------------------------------------------------------------CTCTTGAT--------------------TAC----------GAAGCGC---------A------AA--GAG-T-AAAAATGACACGAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................TTCT--TATACGA-------GATCCACGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................TTAA-C------------------------AATTA----------------AAGAACTCAAC.....................................................................................................................................................................................................................................................................................................................2111.001000000000000000010000000000000000000000000000000000000000000000
.............................................................TCCACGCTGGCAGTGA--GCGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................CATATTTAA-C------------------------AATTA----------------AAGAACTCAACCA...................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000100000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------A------AA--GAG-T-AAAAATGACAC...1911.001000000000000000000000000000000000000010000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTG---------------------------------A------------------------------------------------------------------------------------CTCTTGAT--------------------TAC----------GAAGCGC---------...............................2311.001000000000000000000000000000000000000010000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCAACACAAACGAGCAACT.........................................................................................................................................................................................................................................2211.001000000000000010000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TA----------------AAGAACTCAACCAAAG-GA.............................................................................................................................................................................................................................................................................................................2011.001000000000000010000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................ATTA----------------AAGAACTCAACCAAAG-GACC...........................................................................................................................................................................................................................................................................................................2411.001010000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATTG---------------------------------A------------------------------------------------------------------------------------CTCTTGAT--------------------TAC----------GA.............................................2111.001000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG---------------------------------A------------------------------------------------------------------------------------CTCTTGAT--------------------TAC----------GAAGC..........................................1911.001000000000000010000000000000000000000000000000000000000000000000
droMoj3
AAACTAA--AAC------TCGAAATTG---TGCTTGAAA--------------------GATCCACGCTGGCAGTGCAAGTGCGGAGAGCGCAGGCTGATAAAGAAATC--------------A-AA---------ATACC--------------------AA----ATTGAAAAGA----------------------------------------------------------------------------AAAA-------------------------------------------------------CGATAAAATTAGTGAGCATAAATATACGTAT----------------------AA----------------------------------CAGTTTATTTTCGAGGATCTTAACCAAAGGGGCCAATTTGTGGCAAAGC------------------------CAAATATTCGAAAACAA---AGTAATTTACTAA-ATATCTTA---------------------------------------------------------------------------------------------------------------------------------CCTCCTGCA--------------------TTC----------GTGTCGA------------------------A-AAATATGACACGCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................................................................................................................................................................................................TAT----------------------AA----------------------------------CAGTTTATTTTCGAGGATC..........................................................................................................................................................................................................................................................................................................................2411.001100000
...........C------TCGAAATTG---TGCTTGAAA--------------------GATCCAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
.................................................................................................................................................................................................................................................................................................................................................ACGTAT----------------------AA----------------------------------CAGTTTATTTTCGAGGATCT.........................................................................................................................................................................................................................................................................................................................2811.001100000
................................CTTGAAA--------------------GATCCACGCTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................CAGTTTATTTTCGAGGATCT.........................................................................................................................................................................................................................................................................................................................2011.001100000
.................................................................................................................................................................................................................................................................................................................................................ACGTAT----------------------AA----------------------------------CAGTTTATTTTCGAGGATC..........................................................................................................................................................................................................................................................................................................................2711.001100000
droGri2
AAAAAA------------AAA--------------------------------------------------------------------------------------A-----------------AA---------AAAAT--------------------GGAAAAAATAGAAGAAC---------------------------------------------------------------------------TACG-------------------------------------------------------AAATAAAAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 02:24 PM