ID:

dsi_22283

 Coordinate:

3l:21348968-21349117 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-25.4 -25.2 -25.2

Flybase annnotation

five_prime_UTR [3l_21348866_21348967_-]; exon [3l_21348801_21348967_-]; intron [3l_21348968_21350308_-]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTTCTTGCAAGTGCGCATACTTTTGGTTCGCAGTGTTTTGGTTTTGCGCCTTATCTGGGGGGTGTGTCGTCGTCGGGAGCTTCACGTTTGGCTGCTTATCAAAATCACGCGACTCGACGCGGACCCCCAATGAATTGCCAAGGTTGCTGATAAATGAATACTAATCAAACGTTTGCTCTTTTCGCTGGCCTATCGCTCAGATAGCAAAATTCTAGGTGGTACGAGCCGACGACGACGAAGAATCTGAGAA
************************************************************************..((((((...((((((((.......(((..((((.((((((....((((............))))...))))))))))...))).......))))))))..))))))..........************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 M053
female body
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
 O001
Testis
 SRR553487
NRT_0-2 hours eggs
 M025
embryo
 GSM343915
embryo
 SRR1275487
Male larvae
.....................................................TCTGGGGGGAGTATGGTCG.................................................................................................................................................................................. 19 3 12 19.08 229 87 40 79 14 0 1 0 1 0 1 3 2 1
.....................................................TCTGGGGGGAGTATGGTC................................................................................................................................................................................... 18 3 20 13.15 263 148 43 57 11 0 0 0 0 0 0 0 4 0
..........................................................................................................................................................................................................................GTACGAGCCGACGACGACGAAG.......... 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................GTGTGGCGTAGTCGGTAGC.......................................................................................................................................................................... 19 3 10 1.40 14 11 0 0 0 0 0 1 0 0 2 0 0 0
..............................................................................................................................................................................................................................GAGCCGACGACGACGAAGA......... 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................TAGGTGGTACGAGCCGACGACGACGA............ 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................TCGGGAGCTTCACGTTTGGCTGC........................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................GTTTGCTCTTTTCGCTGGCC............................................................ 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................GGGGTGTGGCGTAGTCGGTA............................................................................................................................................................................ 20 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GGTACGAGCCGACGACGACGAA........... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................ACGAGCCGACGACGACGAAGAATCTG.... 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................CGACTCGACGCGGACCCC........................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................GACCCCCAATGAATTGCC............................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.....................................................TCTGGGGGGAGTATCGTCG.................................................................................................................................................................................. 19 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................GCGCCTTATCTGGGGGGTG.......................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................GACGACGAAGAATCTGAGAA 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AATTCTAGGTGGTACGAG......................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................CAAGATCACGCGACTCGAAGTGG................................................................................................................................ 23 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................................TCTCTGGGGGGTGCATCGTCG.................................................................................................................................................................................. 21 3 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0
..........................................................TGGGTGTGTCGTCATCGGG............................................................................................................................................................................. 19 2 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................TCTGGGGGGAGTATGGTCGT................................................................................................................................................................................. 20 3 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................TCTGGGGGGTGTATGGTCGC................................................................................................................................................................................. 20 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 1 0 0
....................................................TTCTGGGGGGAGTGTGGTCG.................................................................................................................................................................................. 20 3 10 0.10 1 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................CTGGGGGGAGTATCGTCG.................................................................................................................................................................................. 18 2 10 0.10 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................CTCGTGGTCGGGAGC.......................................................................................................................................................................... 15 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................ATTCAAGGTAGTACGAGA........................ 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................ATTCTAATCAAACGT.............................................................................. 15 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

AAAGAACGTTCACGCGTATGAAAACCAAGCGTCACAAAACCAAAACGCGGAATAGACCCCCCACACAGCAGCAGCCCTCGAAGTGCAAACCGACGAATAGTTTTAGTGCGCTGAGCTGCGCCTGGGGGTTACTTAACGGTTCCAACGACTATTTACTTATGATTAGTTTGCAAACGAGAAAAGCGACCGGATAGCGAGTCTATCGTTTTAAGATCCACCATGCTCGGCTGCTGCTGCTTCTTAGACTCTT
************************************************************..((((((...((((((((.......(((..((((.((((((....((((............))))...))))))))))...))).......))))))))..))))))..........************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 SRR553486
Makindu_3 day-old ovaries
 SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
....................................................................................................................................................................AGTTTGCAAACGAGAAAAGCGACCGG............................................................ 26 0 1 1.00 1 0 1 0 0 0
.................................................................................................................................................................................................................................GGCTGCTGCTGCTTCTTAGAC.... 21 0 1 1.00 1 0 0 1 0 0
..........................................................................................................................................................................................................................CATGCTCGGCTGCTGCTG.............. 18 0 1 1.00 1 1 0 0 0 0
..................................................................................GTGCAAACTGTCGAATAGT..................................................................................................................................................... 19 2 6 0.17 1 0 0 0 1 0
.........................................................................................................................................................................................................................................CTGCTTGTTAGACTC.. 15 1 10 0.10 1 0 0 0 1 0
.........................................................................................................AGGCGCTGAGCTGCGCCTT.............................................................................................................................. 19 3 13 0.08 1 0 0 0 0 1
..............................................................................................................................................................................CGAGAAAAGCGAGCGG............................................................ 16 1 16 0.06 1 0 0 0 1 0
...................................................................................................................................................................TAGGTGGCAAACGAGAA...................................................................... 17 2 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:21348918-21349167 - dsi_22283 TTTCTTGCAAGTGCGCATAC-------------------TT---------TTGGTTCGCAGTGTTTTGGTTTTGCGCCTTATCT-------------------GGG-GGGTG--TGTC--GTCGTCGGG--AGCTTCACGTTTGGCTGCTTATCAA------AATCACGCGACT------------------CGAC------------------------------------------------G-CGGACCCCCA--ATGAAT----T---GCCAAGGTTGC--TGATAAA--------------------TGAAT---ACTAATCA------AACGTT-TGC-----TC-----TTTT--------------------------------------------------------CG-----------C---TGGCCTATCGCT--CAGA---------TAGCAAAAT---TCTAGGTGGTACGAG------CCGACGA------CGACGAAGAATCT-GAGAA------
droSec2 scaffold_11:1754046-1754295 - TTTCTTGCAAGTGCGCATAC-------------------TT---------TTGGTTCGCAGTGTTTGGGTTTTGCGCCTTATCT-------------------GGG-GGGTG--TGTC--GTCGTCGGG--AGCTTCACGTTTGGCTGCTTATCAA------AATCACGCGACT------------------CGTC------------------------------------------------G-CGGACCCCCA--ATGAAT----T---GCCAAGGTTGC--TGATAAA--------------------TGAAT---ACTAATCA------AACGTT-TGC-----TC-----TTTT--------------------------------------------------------CG-----------C---TGGCCTATCGCT--CAGA---------TAGCAAAAT---TCTAGGTGGTACGAG------CCGACGA------CGACGAAGAATCT-GAGAG------
dm3 chr3L:21832882-21833131 - TTTCTTGCAAGTGCACATTC-------------------TT---------TTGGTTCGCAGTGTTTCTGTTTTGCGCCTTATCT-------------------GGG-GGGTG--TGTC--GTCGTCGGG--AGCTTCACGTTTGGCTGGTTATCAA------AATCACGCGACT------------------TGAC------------------------------------------------G-CGGACCCCCA--GTGAAT----T---GCCAAGGTTGC--TGATAAA--------------------TGAAT---ACTAATCA------AACGTT-TGC-----TC-----TTTT--------------------------------------------------------CG-----------C---GGGCCTATCGCT--CAGA---------TAGCAAAAT---TCTAGGTGGTACGAG------CCGACGA------CGACGAAGAATCT-GAGAG------
droEre2 scaffold_4784:21505479-21505709 - TTGCATGTTAGTGCGCATAC-------------------TT---------TTGGGTCGCAT-GT------TTTGCGTCTTATCT-------------------GGG-GGGTG--TGTC-----GTCGGG--AGCTTCACGTTTGGCTGCTTATCAA------AATCACGCGACT------------------CGAC------------------------------------------------G-CGGACCCCCA--GTGAAT----T---GCCAAGGTTGC--TGATAAG--------------------TGCAT---ACTAATCA------AACTTT-TGT-------------------------------------------------------------------------------------C---TCGCCTATCGCT--CAGA---------TAGCAAAAT---TCTAGGTGGACCGAG------CCGACGA------CGACGAAGAATAT--AGAG------
droYak3 3L:22098585-22098825 - TTGCATGGAAGTGCGCATAC-------------------TT---------TTGGGTTGCACTGTT-------TGCGCCTTATCT-------------------GG--GGGTG--TGTC-----GTCGGG--AGCTTCACGTTTGGCTGCTTATCAA------AATCACGCGACT------------------CGAC------------------------------------------------G-CGGACCCCCA--GTGAAT----T---GCCAAGGTTGC--TGATAAA--------------------TGAAT---ACTAATCA------AACGCT-TGC-----TC-----GTTT--------------------------------------------------------TG-----------CT--TGGTCTATCGCT--TAGA---------TAGCAAAAT---TCTAGGTGATACGAG------CCGACGA------CGACGAAAAATCTACAGAG------
droEug1 scf7180000409472:660424-660658 - TAGCGCTGCAGTACGTATAT-------------------TT---------TTGTTTCGCAGTGTT----------TTCTTATCT-------------------GG--GGGTG--TGT--------TGGG--TGCTTCACGTTTGGCTGCTTATCAG------AATCACGCGACT------------------CGTC------------------------------------------------T-CGGACCCCCA--ATGAAT----G---GTCAAGGTTGC--TGATAAA--------------------TGAAT---ACTAATCA------AACGCT-TGC-----TC-----GCTT-------------------------------------------------------TCG-----------C---TGCCTTATCGGT--CAGA---------TAGCAAAAT---TCTAGGTGATACGAG------CCGACGA------CGACGAAAAATCTAGAGAG------
droBia1 scf7180000302377:1467641-1467874 + TCGCTCGGCAGTACGTACTT-------------------TT---------TCGCCTCGCAGTGTT----------GCCTTATCT-------------------GGG--GGAG--TGT--------CTGG--GGCTTCACGTTTGGCTGCTTATCAA------AATCACGCGACT------------------CAAC------------------------------------------------G-CGGACCCCCA--ATGAAT----T---GCCAAGGTTGC--TGATAAA--------------------TGAAT---GCTAATCG------AAAGTT-TGT-----CC-----GTTC--------------------------------------------------------CG-----------C---TGGCTTATCGCC--CAGA---------TAGCAAAAT---TCTAGGTGGTACGAG------CCGACGA------CGACAAAGAACTCTCTAAG------
droTak1 scf7180000411178:62757-62989 + TTGCTTGGCAGTACGTATAT-------------------TT---------TTGCGCCGCAGTGTT----------GCCTTATCT-------------------GGG-GGGTG--TGT--------CGGG--TGCTTCACGTTTGGCTGCTTATCAA------AATCACGCGACT------------------CGAA------------------------------------------------G-CGGACCCCCA--ATGAAT----T---GTCAAGGTTGC--TGATAAA--------------------TGAAT---ACTAATCA------GAAGTT-TGT-----TC-----GTTT--------------------------------------------------------TG-----------C---TGGCTTATCACT--CAGA---------TAGCAAAAT---TCTAGGTGGTACGAG------CCGACGA------CGACGAATAATCT--ACAG------
droEle1 scf7180000491199:1031094-1031342 + TTACTCGACAGTACGTACATATGTACATGCATATGTAGATT---------TTCCGATGCGGTGTA----------GCCTTATCT-------------------GGG--GGGG--TGTG----T--C--G--TGCTTCACGTTTGGCTGCTTATCAA------AATCACGCGACT------------------CGAC------------------------------------------------G-CGGACCCCCA--ATGAAT----T---GTCAAGGTTGC--TGATAAA--------------------TGAAT---ACTAATCA------AAAGTT-TGT-----TC-----GTCT--------------------------------------------------------CG-----------C---TGCCTTATCGCT--CAGA---------TAGCGAAAC---TCTAGGTGGTGCGAG------CCGACGC------C---GAAGA-TCCAGACAG------
droRho1 scf7180000762499:13557-13789 + TTTCTCCGCAGTACGTACAT-------------------TT---------TCGCGACGCAGTGTT----------GCTTTATCT-------------------AGG-GGGTG--TGTC----------G--TGCTTCACGTTTGGCTTCTTATCAA------AATCACGCGACT------------------CGAC------------------------------------------------G-CGGACCCCCA--ATGAAT----T---GTCAAGGTTGC--TGATAAA--------------------TGAAT---ACTAATCA------AAAGTT-TGT-----TC-----GCTT--------------------------------------------------------CG-----------C---TGTCTTATCGCT--CAGC---------TAGCGAAAT---TCTAGGTGGTGCGAG------CCGACGA------CGCCAAAGAATCCAGAGAG------
droFic1 scf7180000453831:673864-674102 - TCTCTGGCCGGTACGTACAA-------------------TT---------TCGCCACGCAGTGTT----------CCCTTATCT-------------------CGGGGGGCGTGTGT--------CGGG--TAGTTCACGTTTGGCTGCTTATCAA------AATCACGCGACT------------------CGGC------------------------------------------------G-CGGACCCCCA--ACGAAT----T---GTCAAGGTTGC--TGATAAA--------------------TGACT---AGTAATCA------AAAGTT-TGT-----TC-----GTTT--------------------------------------------------------CA-----------C---TTGCTCGTCGCG--CAGA---------TAGCTACAT-----AAGTTGCCACGAG------CCGACAACGA---CGACGAAGACTTTAGCGAG------
droKik1 scf7180000302441:2244643-2244946 + GTGCCCGAAAGTAGAAAAAG-------------------TTGGTAATATTACGCGAGGCAGTGTGT----GTT--GTCTTATCAG--CG-----TTCAG---CAGG-GGGCG--TGTG----TGGCGGT--GGCTTCACGTTTGGCCGCTTATCAAAATCGGAATCACGCGACT------------------AGCC------------------------------------------------G-CGGACCCCCA--ACGAAT----T---GCCAAGGTCGC--TGATAAA--------------------TAAGA---ACTAATCA------AATGTT-TTA-----TA-TTTCGTTTC-----------------------------GCCCCGCGCTGTCGCTGTGTCTACCTTG-----------C---TGGCTTATCGCC--CAGA---------TAGCTGAGT---TCTAGGTGGAACGTG------CCATTGA------AGTCGAGGAATCCAGAGAGTGAGAC
droAna3 scaffold_13337:20936067-20936302 - TGTAAGGCCAGTAGGTGAAA-------------------TT---------GCGCGACTCAGTGTT----------TCCTTATCT-------------------GGG-GGGTG--TGT--------CGGG--CGCTACACGTTCCGCCGCTTATCAA------AATCACGCGACT------------------CGCC------------------------------------------------G-CAGACCCCCA--ATGAAG----T---CTCAAGGTTGC--CTATAAA--------------------TAAAA---TCTAATCA------AATGTT-TGT-----TT----CGGT----------------------------------CTC--CTCTCTCTC----GGCTCTG-----------C---TGGCTTATCACTCGCAGA---------TAGCAGCAT---TCTAGGTGGTACGAG------CCGACGC------C------------------------
droBip1 scf7180000396707:481768-482010 + TGTAAGGCCAGTAAACGAAA-------------------CT---------ACGCGACCCAGTGTC-----------TCTTATCT-------------------GGG-GGGTG--TGT--------CGGC--CACTACACGTTCCGCCGCTTATCAG------AATCACGCGACT------------------CGCC------------------------------------------------G-CGGACCCCCA--ATGAAG----T---CCCAAGGTTGC--CTATAAA--------------------TAAAA---AATAATCA------AATGTT-TGT-----TT-----GTTTC-----------------------------GGTCTC--CTCTCTCTCTGTTGGCTGTG-----------C---TGGCTTATCACTCTCAGA---------TAGCAGCAT---TCTAGGTGGTACGAG------CCGACGC------C------------------------
dp5 XR_group6:5276203-5276524 + TTACATGCAAGTACAGAAAA-------------------TT---------ACTTGATCAAGTGTG----------GCCTTATCTT--GG-----TTTAGGCCCGGG-GGGTG--TGTC----TGTCGGTCTCTCTTCACGTTTGGCTCCTTATCAA------AATCACGCGACGGTGACGGTGACGCTGCC---------GCTGCCGCTCGTGCGACTCG--------------CCCGAGCAGTG-TAGCCCCCCA--ATGAAT----T---TTCAAGGCTGCGCTGATAAA--------------------TGAAA---ACTAATCA------AATGTT-T-T-----TCGTTTCGTTTTGT----------A---------------------------------------CCTTTCGCCTGCCGCC-TTTGTGCTTATCACA--CAGA---------TAGCAAAAT---TCTAGTTGAAACGAAGCACCGCTGACACCGACGACGACAAC------------------
droPer2 scaffold_9:3586639-3586960 + TTACATGCAAGTACAGAAAA-------------------TT---------ACTTGATCAAGTGTG----------GCCTTATCTT--GG-----TTTAGGCCCGGG-GGGTG--TGTC----TGTCGGTCTCTCTTCACGTTTGGCTCCTTATCAA------AATCACGCGACGGTGACGGTGACGCTGCC---------GCTGCTGCTCGTGCGACTCG--------------CCCGAGCAGTG-TAGCCCCCCA--ATGAAT----T---TTCAAGGCTGCGCTGATAAA--------------------TGAAA---ACTAATCA------AATGTT-T-T-----TCGTTTCGTTTTGT----------A---------------------------------------CCTTTCGCCTGCCGCC-TTTGTGCTTATCACA--CAGA---------TAGCAAAAT---TCTAGTTGAAACGAAGCACCGCTGACACCGACGACGACAAC------------------
droWil2 scf2_1100000004762:2050251-2050574 + TC-------------------------------------------------------CCAGTGTG----------CTCTTCTGATAGCT-----TT------TCGG-GGGTG--TGTCAAGTTGTGGGGGCTTCTTCACGTTTGGCTGCTTATCAA------AATCACGCGACA---------------CCGCTGCGCCGGGCGC-------GCGACTCCTCAGATTGCGGGACCCC---------GAGACCCCCCACAAGAAT----TCTTTTCAAGGCTACAGTGATAAA--------------------TGAAT---ACTAATCATTTGCAAATTTT-TGT-----TT---TCGTTT-----GTTTCCATGTCTTATCTCCCACTCTCCCTCTCGCTCTCTCTCTGTC----TCTCACTTG----C-TTTGTCTTTAT-GCT--AAGGAAGAAGAAGAAGCCAATACATTCTAGTTGA--------------------------------GAACCACCTGAA------
droVir3 scaffold_13049:12366412-12366654 + TTATACGTAAATGCAAATTT-------------------G----------ATTTGTTTTGGTATT----------TTATTATCTT----TAACGTTGA----AAGT-GGGTG--TGTC-----------------TCACGTTTGGCTGCTTATCAAG-TG-TAATCACGCGTCG------------------TTTCGCCTGCTGCC-----------------------------------AGCGTCAGACCCCCA--ATGAACA---T---TTCAAGGTTGC--TGATAAA--C-G--GTGCTG--TTCTATAAATGGAATTAATGA------AACTTTTTGT-----TT-----GTGT-------------A---------------------------------------CTATT-----------C---T--GTTATCTCA--CAGA--------GCAACAACAT---TTTGGTT----------------------------------------------------
droMoj3 scaffold_6680:15104583-15104815 - --------------------------------------------------------------------------------------------------------GA-GGGTG--TGTC-----------------TCGCGTTTGGCTGCTTATCAAA-TC-AATTCACGTTACG------------------TTTCGCCGGCTGCCGCTA--------------------------------ATGCTAGACCCCCA--ATGAACGAACG---GCCAAGGTTGC--TGATAAACACCGATGTGCTGTGTTCTATAAATGGCATTAATAA------AAAACTGTGT-----TT-----GTAT-------------GCGTTAT---------------T--TTC--------------TC-------------------GTTATCTCA--CAGG--------GCAACGAAAT---TA--GACAAAAAAA-TA----AAAACAA------AAACAAAAAA----AAAAG------
droGri2 scaffold_15110:22947840-22948118 + TTGGTTGTAAATATATATAAACGTAAATGAAA-------GT---------ATTTTAA-TAGTAC------------TTTGATATC--GGTAACATTGA----CAGT-GGGCGTGTGG--------C-----TGCCGCACGTTTGGCTGCTTATCAAG-TAAAAATCACGCGACG------------------CTGCGCCGGCTGCC-----------------------------------AGAGTCAGACCCCCA--ATGAAC----G---TTCAAGGTTGC--TGATAAAAAC-G--CTGCCG----CTATAAATGGAATTAATGA--------CGTC-TTTTTTTTTC-----TTTTTTTTTGTTTGTATTTTTTTT------------------------------------TT-----------C---AACGTTATCTCG--CAGA--------GCGACAAAAT---TCTAG------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTTCTTGCAAGTGCGCATAC-------------------TT---------TTGGTTCGCAGTGTTTTGGTTTTGCGCCTTATCT-------------------GGG-GGGTG--TGTC--GTCGTCGGG--AGCTTCACGTTTGGCTGCTTATCAA------AATCACGCGACT------------------CGAC------------------------------------------------G-CGGACCCCCA--ATGAAT----T---GCCAAGGTTGC--TGATAAA--------------------TGAAT---ACTAATCA------AACGTT-TGC-----TC-----TTTT--------------------------------------------------------CG-----------C---TGGCCTATCGCT--CAGA---------TAGCAAAAT---TCTAGGTGGTACGAG------CCGACGA------CGACGAAGAATCT-GAGAA------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGAG------CCGACGA------CGACGAAG.................2212.00202000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAG------CCGACGA------CGACGAAGA................1911.00100000010000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGTGGTACGAG------CCGACGA------CGACGA...................2611.00100000001000000000
............................................................................................................................TCGGG--AGCTTCACGTTTGGCTGC..............................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000000000
.................................................................................................................................................................................................................................................................................................................................................GTT-TGC-----TC-----TTTT--------------------------------------------------------CG-----------C---TGGCC.............................................................................................2011.00110000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTACGAG------CCGACGA------CGACGAA..................2211.00101000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAG------CCGACGA------CGACGAAGAATCT-G..........2611.00100000000000001000
.........................................................................................................................................................................CGACT------------------CGAC------------------------------------------------G-CGGACCCC.....................................................................................................................................................................................................................................................................................1811.00110000000000000000
........................................................................................................................................................................................................................................................GACCCCCA--ATGAAT----T---GCC................................................................................................................................................................................................................................................................1811.00100001000000000000
.........................................................................GCGCCTTATCT-------------------GGG-GGGTG--.................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA------CGACGAAGAATCT-GAGAA------2011.00110000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT---TCTAGGTGGTACGAG------......................................1811.00100000000001000000
droSec2
TTTCTTGCAAGTGCGCATAC-------------------TT---------TTGGTTCGCAGTGTTTGGGTTTTGCGCCTTATCT-------------------GGG-GGGTG--TGTC--GTCGTCGGG--AGCTTCACGTTTGGCTGCTTATCAA------AATCACGCGACT------------------CGTC------------------------------------------------G-CGGACCCCCA--ATGAAT----T---GCCAAGGTTGC--TGATAAA--------------------TGAAT---ACTAATCA------AACGTT-TGC-----TC-----TTTT--------------------------------------------------------CG-----------C---TGGCCTATCGCT--CAGA---------TAGCAAAAT---TCTAGGTGGTACGAG------CCGACGA------CGACGAAGAATCT-GAGAG------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGTGGTACGAG------CCGACGA------CGACG....................2511.0011000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGA------CGACGAAGAATCT-...........1811.0010001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT---TCTAGGTGGTACGAG------CCGACG................................2311.0011000
dm3
TTTCTTGCAAGTGCACATTC-------------------TT---------TTGGTTCGCAGTGTTTCTGTTTTGCGCCTTATCT-------------------GGG-GGGTG--TGTC--GTCGTCGGG--AGCTTCACGTTTGGCTGGTTATCAA------AATCACGCGACT------------------TGAC------------------------------------------------G-CGGACCCCCA--GTGAAT----T---GCCAAGGTTGC--TGATAAA--------------------TGAAT---ACTAATCA------AACGTT-TGC-----TC-----TTTT--------------------------------------------------------CG-----------C---GGGCCTATCGCT--CAGA---------TAGCAAAAT---TCTAGGTGGTACGAG------CCGACGA------CGACGAAGAATCT-GAGAG------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGGTGGTACGAG------CCGACGA------.........................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TT---------TTGGTTCGCAGTGTTTCTGTTTTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAT---TCTAGGTGGTACGAG------CCG...................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------TAGCAAAAT---TCTAGGTGGT.................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGTGGTACGAG------CCGACGA------CGAC.....................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTACGAG------CCGACGA------CGACG....................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................GCCTTATCT-------------------GGG-GGGTG--TG...............................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................CCTTATCT-------------------GGG-GGGTG--TG...............................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGGTGGTACGAG------CCGACGA------CGA......................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TGGTTCGCAGTGTTTCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................GGGTG--TGTC--GTCGTCGGG--AGC.............................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTACGAG------CCGACGA------CGACGAAG.................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................AA------AATCACGCGACT------------------TGAC------------------------------------------------G-.............................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................T-TGC-----TC-----TTTT--------------------------------------------------------CG-----------C---GGGCCTATCGCT--CA..................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................TC-----TTTT--------------------------------------------------------CG-----------C---GGGCCTATCGCT--....................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................AAT---ACTAATCA------AACGTT-TGC-----......................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCAAAAT---TCTAGGTGGTACGAG------C.....................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT---TCTAGGTGGTACGAG------......................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................TC--GTCGTCGGG--AGCTTCACGTTTG...................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................CT------------------TGAC------------------------------------------------G-CGGACCCCCA--GTGAAT----T---G..................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTACGAG------CCGACGA------CGA......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
..TCTTGCAAGTGCACATTC-------------------TT---------TTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................A------AACGTT-TGC-----TC-----TTTT--------------------------------------------------------CG-----------C---G.................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGA------CGACGAAGAATCT-GAG........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................TT--------------------------------------------------------CG-----------C---GGGCCTATCGCT--CAG.................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAT---TCTAGGTGGTACGAG------......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................CGCCTTATCT-------------------GGG-GGGTG--TGTC--GT.........................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..............ACATTC-------------------TT---------TTGGTTCGCAGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT---TCTAGGTGGTACGAG------C.....................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGGTACGAG------CCGACGA------.........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAT---TCTAGGTGGTACGAG------CCGACGA------.........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................GC-----TC-----TTTT--------------------------------------------------------CG-----------C---GGGCCTA...........................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGGTACGAG------CCGACGA------CG.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG------CCGACGA------CGACGAAGAATCT-GAGAC------2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAAAT---TCTAGGTGGTACG..............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGAG------CCGACGA------CGACGAAGAATC.............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAT---TCTAGGTGGTACGAG------CCGACGG------.........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................TTTT--------------------------------------------------------CG-----------C---GGGCCTATCGCT--CAGA---------.......................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAG------CCGACGA------CGACGAAGAATCT-GA.........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGA------CGACGAAGAATCT-GAGA.......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAAT---TCTAGGTGGTACGAG------......................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................C------------------------------------------------G-CGGACCCCCA--GTGAAT----.......................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................TTT--------------------------------------------------------CG-----------C---GGGCCTATCGCT--CAG.................................................................................2111.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................TTT--------------------------------------------------------CG-----------C---GGGCCTATCGCT--CAGT---------.......................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................CGCCTTATCT-------------------GGG-GGGTG--TG...............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGA------CGACGAAGAATCT-GA.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................CG-----------C---GGGCCTATCGCT--CAGA---------.......................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG------CCGACGA------CGACGAAGAATCT-GAG........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGTGGTACGAG------CCGACGA------CGA......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................C-----TC-----TTTT--------------------------------------------------------CG-----------C---GGGCCTATCGCT--CAG.................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TT---------TTGGTTCGCAGTGTTTCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGA------CGACGAAGAATCT-GAGAG------2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGGTGGTACGAG------CCGAC.................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................AAGGTTGC--TGATAAA--------------------TGAA.......................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAT---TCTAGGTGGTACGAG------C.....................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAG------CCGACGA------CGACGAAGAATC.............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................TTT--------------------------------------------------------CG-----------C---GGGCCTATCGCT--CAGA---------TAGCA..................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG------CCGACGA------CGACGAAGAATC.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................GTC--GTCGTCGGG--AGCTTCAC........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAT---TCTAGGTGGTACGAG------C.....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT---TCTAGGTGGTACGAG------CCG...................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
......................................................................TTTGCGCCTTATCT-------------------GGG-GGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTACGAG------CCGACGA------CGACGA...................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................C-------------------TT---------TTGGTTCGCAGTGTTTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAGGTGGTACGAG------CCGACGA------CGAC.....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................AATCACGCGACT------------------TGAC------------------------------------------------G-CGGA.........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................................................GCGCCTTATCT-------------------GGG-GGGTG--TG...............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTACGAG------CCGACGA------CGACGAAGA................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAGGTGGTACGAG------CCGAC.................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTACGAG------CCGACGA------CGA......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................TCTGTTTTGCGCCTTATCT-------------------GGG-GGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
............................................................................CCTTATCT-------------------GGG-GGGTG--TGTC--G..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CATTC-------------------TT---------TTGGTTCGCAGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................................................................................................................................GCCAAGGTTGC--TGATAAA--------------------TGAAT---AC.................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTACGAG------CCGACGA------CGACGAAGA................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................TG--TGTC--GTCGTCGGG--AGC.............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCAAAAT---TCTAGGTGGTACG..............................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.............CACATTC-------------------TT---------TTGGTTCGCAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................TC--GTCGTCGGG--AGCTTCACGTTTGGA.................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................CAAGGTTGC--TGATAAA--------------------TG.........................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG------CCGACGA------CGACGAAGAATCT-GAGA.......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TTGCATGTTAGTGCGCATAC-------------------TT---------TTGGGTCGCAT-GT------TTTGCGTCTTATCT-------------------GGG-GGGTG--TGTC-----GTCGGG--AGCTTCACGTTTGGCTGCTTATCAA------AATCACGCGACT------------------CGAC------------------------------------------------G-CGGACCCCCA--GTGAAT----T---GCCAAGGTTGC--TGATAAG--------------------TGCAT---ACTAATCA------AACTTT-TGT-------------------------------------------------------------------------------------C---TCGCCTATCGCT--CAGA---------TAGCAAAAT---TCTAGGTGGACCGAG------CCGACGA------CGACGAAGAATAT--AGAG------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGA------CGACGAAGAATAT--AGA.......2211.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAT---TCTAGGTGGACCGAG------CC....................................2111.0010000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAAAT---TCTAGGTGGACCG..............................................2111.0010010000
droYak3
TTGCATGGAAGTGCGCATAC-------------------TT---------TTGGGTTGCACTGTT-------TGCGCCTTATCT-------------------GG--GGGTG--TGTC-----GTCGGG--AGCTTCACGTTTGGCTGCTTATCAA------AATCACGCGACT------------------CGAC------------------------------------------------G-CGGACCCCCA--GTGAAT----T---GCCAAGGTTGC--TGATAAA--------------------TGAAT---ACTAATCA------AACGCT-TGC-----TC-----GTTT--------------------------------------------------------TG-----------CT--TGGTCTATCGCT--TAGA---------TAGCAAAAT---TCTAGGTGATACGAG------CCGACGA------CGACGAAAAATCTACAGAG------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................GGTG--TGTC-----GTCGGG--AGCTTCACG.......................................................................................................................................................................................................................................................................................................................................................................................................2311.00100001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAAAT---TCTAGGTGATACG..............................................2111.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT---TCTAGGTGATACGAG------CC....................................1911.00101000000000
droEug1
TAGCGCTGCAGTACGTATAT-------------------TT---------TTGTTTCGCAGTGTT----------TTCTTATCT-------------------GG--GGGTG--TGT--------TGGG--TGCTTCACGTTTGGCTGCTTATCAG------AATCACGCGACT------------------CGTC------------------------------------------------T-CGGACCCCCA--ATGAAT----G---GTCAAGGTTGC--TGATAAA--------------------TGAAT---ACTAATCA------AACGCT-TGC-----TC-----GCTT-------------------------------------------------------TCG-----------C---TGCCTTATCGGT--CAGA---------TAGCAAAAT---TCTAGGTGATACGAG------CCGACGA------CGACGAAAAATCTAGAGAG------SizeHit CountTotal NormTotal
No Reads
droBia1
TCGCTCGGCAGTACGTACTT-------------------TT---------TCGCCTCGCAGTGTT----------GCCTTATCT-------------------GGG--GGAG--TGT--------CTGG--GGCTTCACGTTTGGCTGCTTATCAA------AATCACGCGACT------------------CAAC------------------------------------------------G-CGGACCCCCA--ATGAAT----T---GCCAAGGTTGC--TGATAAA--------------------TGAAT---GCTAATCG------AAAGTT-TGT-----CC-----GTTC--------------------------------------------------------CG-----------C---TGGCTTATCGCC--CAGA---------TAGCAAAAT---TCTAGGTGGTACGAG------CCGACGA------CGACAAAGAACTCTCTAAG------SizeHit CountTotal NormTotal
No Reads
droTak1
TTGCTTGGCAGTACGTATAT-------------------TT---------TTGCGCCGCAGTGTT----------GCCTTATCT-------------------GGG-GGGTG--TGT--------CGGG--TGCTTCACGTTTGGCTGCTTATCAA------AATCACGCGACT------------------CGAA------------------------------------------------G-CGGACCCCCA--ATGAAT----T---GTCAAGGTTGC--TGATAAA--------------------TGAAT---ACTAATCA------GAAGTT-TGT-----TC-----GTTT--------------------------------------------------------TG-----------C---TGGCTTATCACT--CAGA---------TAGCAAAAT---TCTAGGTGGTACGAG------CCGACGA------CGACGAATAATCT--ACAG------SizeHit CountTotal NormTotal
No Reads
droEle1
TTACTCGACAGTACGTACATATGTACATGCATATGTAGATT---------TTCCGATGCGGTGTA----------GCCTTATCT-------------------GGG--GGGG--TGTG----T--C--G--TGCTTCACGTTTGGCTGCTTATCAA------AATCACGCGACT------------------CGAC------------------------------------------------G-CGGACCCCCA--ATGAAT----T---GTCAAGGTTGC--TGATAAA--------------------TGAAT---ACTAATCA------AAAGTT-TGT-----TC-----GTCT--------------------------------------------------------CG-----------C---TGCCTTATCGCT--CAGA---------TAGCGAAAC---TCTAGGTGGTGCGAG------CCGACGC------C---GAAGA-TCCAGACAG------SizeHit CountTotal NormTotal
No Reads
droRho1
TTTCTCCGCAGTACGTACAT-------------------TT---------TCGCGACGCAGTGTT----------GCTTTATCT-------------------AGG-GGGTG--TGTC----------G--TGCTTCACGTTTGGCTTCTTATCAA------AATCACGCGACT------------------CGAC------------------------------------------------G-CGGACCCCCA--ATGAAT----T---GTCAAGGTTGC--TGATAAA--------------------TGAAT---ACTAATCA------AAAGTT-TGT-----TC-----GCTT--------------------------------------------------------CG-----------C---TGTCTTATCGCT--CAGC---------TAGCGAAAT---TCTAGGTGGTGCGAG------CCGACGA------CGCCAAAGAATCCAGAGAG------SizeHit CountTotal NormTotal
No Reads
droFic1
TCTCTGGCCGGTACGTACAA-------------------TT---------TCGCCACGCAGTGTT----------CCCTTATCT-------------------CGGGGGGCGTGTGT--------CGGG--TAGTTCACGTTTGGCTGCTTATCAA------AATCACGCGACT------------------CGGC------------------------------------------------G-CGGACCCCCA--ACGAAT----T---GTCAAGGTTGC--TGATAAA--------------------TGACT---AGTAATCA------AAAGTT-TGT-----TC-----GTTT--------------------------------------------------------CA-----------C---TTGCTCGTCGCG--CAGA---------TAGCTACAT-----AAGTTGCCACGAG------CCGACAACGA---CGACGAAGACTTTAGCGAG------SizeHit CountTotal NormTotal
No Reads
droKik1
GTGCCCGAAAGTAGAAAAAG-------------------TTGGTAATATTACGCGAGGCAGTGTGT----GTT--GTCTTATCAG--CG-----TTCAG---CAGG-GGGCG--TGTG----TGGCGGT--GGCTTCACGTTTGGCCGCTTATCAAAATCGGAATCACGCGACT------------------AGCC------------------------------------------------G-CGGACCCCCA--ACGAAT----T---GCCAAGGTCGC--TGATAAA--------------------TAAGA---ACTAATCA------AATGTT-TTA-----TA-TTTCGTTTC-----------------------------GCCCCGCGCTGTCGCTGTGTCTACCTTG-----------C---TGGCTTATCGCC--CAGA---------TAGCTGAGT---TCTAGGTGGAACGTG------CCATTGA------AGTCGAGGAATCCAGAGAGTGAGACSizeHit CountTotal NormTotal
No Reads
droAna3
TGTAAGGCCAGTAGGTGAAA-------------------TT---------GCGCGACTCAGTGTT----------TCCTTATCT-------------------GGG-GGGTG--TGT--------CGGG--CGCTACACGTTCCGCCGCTTATCAA------AATCACGCGACT------------------CGCC------------------------------------------------G-CAGACCCCCA--ATGAAG----T---CTCAAGGTTGC--CTATAAA--------------------TAAAA---TCTAATCA------AATGTT-TGT-----TT----CGGT----------------------------------CTC--CTCTCTCTC----GGCTCTG-----------C---TGGCTTATCACTCGCAGA---------TAGCAGCAT---TCTAGGTGGTACGAG------CCGACGC------C------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAT---TCTAGGTGGTACGAG------CC....................................2411.001000001
droBip1
TGTAAGGCCAGTAAACGAAA-------------------CT---------ACGCGACCCAGTGTC-----------TCTTATCT-------------------GGG-GGGTG--TGT--------CGGC--CACTACACGTTCCGCCGCTTATCAG------AATCACGCGACT------------------CGCC------------------------------------------------G-CGGACCCCCA--ATGAAG----T---CCCAAGGTTGC--CTATAAA--------------------TAAAA---AATAATCA------AATGTT-TGT-----TT-----GTTTC-----------------------------GGTCTC--CTCTCTCTCTGTTGGCTGTG-----------C---TGGCTTATCACTCTCAGA---------TAGCAGCAT---TCTAGGTGGTACGAG------CCGACGC------C------------------------SizeHit CountTotal NormTotal
No Reads
dp5
TTACATGCAAGTACAGAAAA-------------------TT---------ACTTGATCAAGTGTG----------GCCTTATCTT--GG-----TTTAGGCCCGGG-GGGTG--TGTC----TGTCGGTCTCTCTTCACGTTTGGCTCCTTATCAA------AATCACGCGACGGTGACGGTGACGCTGCC---------GCTGCCGCTCGTGCGACTCG--------------CCCGAGCAGTG-TAGCCCCCCA--ATGAAT----T---TTCAAGGCTGCGCTGATAAA--------------------TGAAA---ACTAATCA------AATGTT-T-T-----TCGTTTCGTTTTGT----------A---------------------------------------CCTTTCGCCTGCCGCC-TTTGTGCTTATCACA--CAGA---------TAGCAAAAT---TCTAGTTGAAACGAAGCACCGCTGACACCGACGACGACAAC------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGTTGAAACGAAGCACCGCTG...................................2311.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTGACACCGACGACGAC.....................1911.0010100000000
...........................................................................................................................................................................ACGGTGACGGTGACGC........................................................................................................................................................................................................................................................................................................................................................1680.1310000000001
droPer2
TTACATGCAAGTACAGAAAA-------------------TT---------ACTTGATCAAGTGTG----------GCCTTATCTT--GG-----TTTAGGCCCGGG-GGGTG--TGTC----TGTCGGTCTCTCTTCACGTTTGGCTCCTTATCAA------AATCACGCGACGGTGACGGTGACGCTGCC---------GCTGCTGCTCGTGCGACTCG--------------CCCGAGCAGTG-TAGCCCCCCA--ATGAAT----T---TTCAAGGCTGCGCTGATAAA--------------------TGAAA---ACTAATCA------AATGTT-T-T-----TCGTTTCGTTTTGT----------A---------------------------------------CCTTTCGCCTGCCGCC-TTTGTGCTTATCACA--CAGA---------TAGCAAAAT---TCTAGTTGAAACGAAGCACCGCTGACACCGACGACGACAAC------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAAGCACCGCTGACACCGACGACGA......................2711.001000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCACCGCTGACACCGACGACGAC.....................2611.001100000
droWil2
TC-------------------------------------------------------CCAGTGTG----------CTCTTCTGATAGCT-----TT------TCGG-GGGTG--TGTCAAGTTGTGGGGGCTTCTTCACGTTTGGCTGCTTATCAA------AATCACGCGACA---------------CCGCTGCGCCGGGCGC-------GCGACTCCTCAGATTGCGGGACCCC---------GAGACCCCCCACAAGAAT----TCTTTTCAAGGCTACAGTGATAAA--------------------TGAAT---ACTAATCATTTGCAAATTTT-TGT-----TT---TCGTTT-----GTTTCCATGTCTTATCTCCCACTCTCCCTCTCGCTCTCTCTCTGTC----TCTCACTTG----C-TTTGTCTTTAT-GCT--AAGGAAGAAGAAGAAGCCAATACATTCTAGTTGA--------------------------------GAACCACCTGAA------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................GCTTCTTCACGTTTGGCT................................................................................................................................................................................................................................................................................................................................................................................................1812.00220000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAGTTGA--------------------------------GAACCACCT.........1811.00110000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCTAGTTGA--------------------------------GAACCACCT.........2111.00101000
droVir3
TTATACGTAAATGCAAATTT-------------------G----------ATTTGTTTTGGTATT----------TTATTATCTT----TAACGTTGA----AAGT-GGGTG--TGTC-----------------TCACGTTTGGCTGCTTATCAAG-TG-TAATCACGCGTCG------------------TTTCGCCTGCTGCC-----------------------------------AGCGTCAGACCCCCA--ATGAACA---T---TTCAAGGTTGC--TGATAAA--C-G--GTGCTG--TTCTATAAATGGAATTAATGA------AACTTTTTGT-----TT-----GTGT-------------A---------------------------------------CTATT-----------C---T--GTTATCTCA--CAGA--------GCAACAACAT---TTTGGTT----------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................................................................GCTGCC-----------------------------------AGCGTCAGACCC......................................................................................................................................................................................................................................................................................1812.002020000000000000000000000000000000000000000000000000000000000000
..........................................................................................AACGTTGA----AAGT-GGGTG--TG...............................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000001000000000000000000000000000000000000000000000000000000
............................................................................................................................................TTTGGCTGCTTATCAAG-TG-TAATCACGC.........................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000100000000000000000000000000000000000
..............................................................................TTATCTT----TAACGTTGA----AAGT-G.......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................ACGCGTCG------------------TTTCGCCTGCTGC......................................................................................................................................................................................................................................................................................................................................2111.001010000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................GTTGC--TGATAAA--C-G--GTGCTG--TTCTAT..........................................................................................................................................................................................................................2611.001000000000000000000000000000000100000000000000000000000000000000
.......................................................................................................................................................................................................TGCTGCC-----------------------------------AGCGTCAGACCCCCA--ATGAAC...........................................................................................................................................................................................................................................................................2811.001010000000000000000000000000000000000000000000000000000000000000
..................TT-------------------G----------ATTTGTTTTGGTATT----------TTATTATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................TCGCCTGCTGCC-----------------------------------AGCGTCAGA.........................................................................................................................................................................................................................................................................................2111.001000001000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................TTATCAAG-TG-TAATCACGCGTCG------------------TT.................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000010000000000000000000000000000000000000
...........................................................................................................................................................AG-TG-TAATCACGCGTCG------------------TTTCGCC............................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000001000000000000000000000000000000000000
..................................................................................CTT----TAACGTTGA----AAGT-GGGTG--TG...............................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000010000000000000000000000000000000000
droMoj3
--------------------------------------------------------------------------------------------------------GA-GGGTG--TGTC-----------------TCGCGTTTGGCTGCTTATCAAA-TC-AATTCACGTTACG------------------TTTCGCCGGCTGCCGCTA--------------------------------ATGCTAGACCCCCA--ATGAACGAACG---GCCAAGGTTGC--TGATAAACACCGATGTGCTGTGTTCTATAAATGGCATTAATAA------AAAACTGTGT-----TT-----GTAT-------------GCGTTAT---------------T--TTC--------------TC-------------------GTTATCTCA--CAGG--------GCAACGAAAT---TA--GACAAAAAAA-TA----AAAACAA------AAACAAAAAA----AAAAG------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
TTGGTTGTAAATATATATAAACGTAAATGAAA-------GT---------ATTTTAA-TAGTAC------------TTTGATATC--GGTAACATTGA----CAGT-GGGCGTGTGG--------C-----TGCCGCACGTTTGGCTGCTTATCAAG-TAAAAATCACGCGACG------------------CTGCGCCGGCTGCC-----------------------------------AGAGTCAGACCCCCA--ATGAAC----G---TTCAAGGTTGC--TGATAAAAAC-G--CTGCCG----CTATAAATGGAATTAATGA--------CGTC-TTTTTTTTTC-----TTTTTTTTTGTTTGTATTTTTTTT------------------------------------TT-----------C---AACGTTATCTCG--CAGA--------GCGACAAAAT---TCTAG------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 02:17 PM