ID:

dsi_22221

 Coordinate:

x:20453125-20453274 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.9 -8.9 -8.9

Flybase annnotation

Antisense to intron [x_20448059_20459333_+]

No Repeatable elements found

Sense Strand Reads

ATGATGGAACAACACAACATATCGCGTTTTCGGTTCTTAATAATCCAATTGTAAGTCGGAAGTTTCTATATCTGGTTACACCGCAAAAAGGTATCCTGTTTGGTATAATTTCTGTTGGAAGACGTTAGCAAAGAAAATGGGAACCCAATTTGATGTTGTCACAACTGTTTCCCCGGCGTTATTACGACTAAACTGTGCGTTTCGCGACTGTAAGACAAGTTAGCAGGATTTACGTTTCTTAATTACAATT
*******************************************************************************************************************.((.(((((((.((((..(((.(((....))).)))....))))...))).)))).)).........******************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M023
head
 M024
male body		 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 M053
female body
 M025
embryo
 O001
Testis
 GSM343915
embryo
............CACAACTTATTGCGTTTTGGG......................................................................................................................................................................................................................... 21 3 2 6.50 13 0 0 1 12 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TGTGCGTTTCGCGACTGTAAGACAAGT.............................. 27 0 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................CTAAACTGTGCGTTTCGCGAC.......................................... 21 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................TTCGCGACTGTAAGACAAGT.............................. 20 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................TGTTGTCACAACTGTTTCCCCGGCGTTAT.................................................................... 29 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CTGTAAGACAAGTTAGCAGGA...................... 21 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
........................................................................................................................................ATGGGAACCCAATTTGATGTT............................................................................................. 21 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
...................................................................................................................TGGAAGACGTTAGCAAAGAAAATGGGA............................................................................................................ 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GCGACTGTAAGACAAGTTAGCAGGATTTA.................. 29 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................ACGACTAAACTGTGCGTTTCG.............................................. 21 0 1 2.00 2 0 0 0 0 0 0 1 0 1 0 0 0
...................................................................................................TTGGTATAATTTCTGTTGGAA.................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................TGTTTGGTAAATTTTCTGTTGGAAGACGT............................................................................................................................. 29 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................AATGGGAACCCAATTTGATGTTGT........................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
...................................................TAAGTCGGAAGTTTCTATATC.................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
................................................................TCTATATCTGGTTACACCGCAAAAAGG............................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TGTGTTGGAAGACGTTATCAAGGA.................................................................................................................... 24 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................GCGACTGTAAGACAAGTTAGCAGGAT..................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TAGCAAAGAAAATGGGAACCCAATT.................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................TACACCGCAAAAAGGTATCCTGTTTGGTA................................................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................ATTGTAAGTCGGAAGTTTC........................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
.............................................................................................................................TAGCAAAAAAAATGGGAACCC........................................................................................................ 21 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
..........................................ATCCAATTGTAAGTCGGAAGT........................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...................................................TGGGTCGGAGGTTTCTATATC.................................................................................................................................................................................. 21 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................TTATTACGACTAAACTGTGCG................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................TTTCGCGACTGTAAGACAAG............................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................TTTGGTATAATTTCTGTTGGA................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................CAACTGTTTCCCCGGCGTTAT.................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
.............................................................................................TCCTGTTTGGTATAATTTCTGTTGGAAGA................................................................................................................................ 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................TGTTGGAAGACGTTAGCAAAGAAAA................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................AAAGGGTATCCTGTTTGGTAT................................................................................................................................................ 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................................ACAACTGTTTCCCCGGCGTTT..................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................TAATTTCTGTTGGAAGACGTTAGC......................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................AACTGTGCGTTTCGCGACT......................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................GACTGTAAGACAAGTTAGCAGGATTT................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................CTGTTTCCCCGGCGTTATTAC................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.....GGAACAACACAACATATCGCGTTTTCGGTA....................................................................................................................................................................................................................... 30 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TATAATTTCTGTTGGAAGACG.............................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
...............................................................................................................................................................CACAACTGTTTCCCCGGCGTT...................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................CGCAAAAAGGTATCCTGTTTGGTA................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........CAACACAACATATCGCGTT.............................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................CAAGTTAGCAGGATTTACGTT.............. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................TTCGGTTCTTAATAATCCAATTGTAAGT.................................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................CAAGTTAGCTGGATTAATGTT.............. 21 3 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0
................................................TTGTAAGTCGTAAGTT.......................................................................................................................................................................................... 16 1 9 0.11 1 0 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................AAAGAAAATGGGAAGC......................................................................................................... 16 1 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0
..........................................................................................................AAATTCTGTTGGAAGA................................................................................................................................ 16 1 10 0.10 1 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................................CTTGTTACATCGCAAGAAG................................................................................................................................................................ 19 3 10 0.10 1 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................AGAAAGGAAAGTGGGAACCC........................................................................................................ 20 3 11 0.09 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................TCGAAGACGGTAGCAAAAAA................................................................................................................... 20 3 19 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0
.TGATGAAGCAACACAAC........................................................................................................................................................................................................................................ 17 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................GGATGATTTCTGTTGGA................................................................................................................................... 17 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

TACTACCTTGTTGTGTTGTATAGCGCAAAAGCCAAGAATTATTAGGTTAACATTCAGCCTTCAAAGATATAGACCAATGTGGCGTTTTTCCATAGGACAAACCATATTAAAGACAACCTTCTGCAATCGTTTCTTTTACCCTTGGGTTAAACTACAACAGTGTTGACAAAGGGGCCGCAATAATGCTGATTTGACACGCAAAGCGCTGACATTCTGTTCAATCGTCCTAAATGCAAAGAATTAATGTTAA
********************************************************************.((.(((((((.((((..(((.(((....))).)))....))))...))).)))).)).........******************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 M024
male body		 O002
Head
 SRR902009
testis
 O001
Testis
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
.................................................ACATTCAGCCTTCAAAGATA..................................................................................................................................................................................... 20 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0
......................................................................................................................................................................................................CAAAGCGCTGACATTCTGTT................................ 20 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0
..............................................TTAACATTCAGCCTTGGAAGGT...................................................................................................................................................................................... 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..........TTGTGTTGTAGAGCGC................................................................................................................................................................................................................................ 16 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
....ACCTTGTTGTGTTGTATAGCG................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................................................ACATTCTGTTCAATCGTC........................ 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................CTTCTGCAATCGTTTCTTTTAC............................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................................AGGGGCCGCAATAATGCTGAT............................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................CAAACCATATTAAAGACAAC..................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.............................AGCCAAGAATTATTAGGTTAACAT..................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................TCTGCAATCGTTTCTTTTACC.............................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................TTGACACGCAAAGCGCTGACATTCTGTT................................ 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................CGCAATATTGCTGATTTT......................................................... 18 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................TACAACAGTGTTGACAAAGGGGCCGC........................................................................ 26 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
..........TTGTGTTGTATAGCGCAAAAGCCAAGA..................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..CTACCTTGTTGTGTTGTAT..................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.....................................................TCAGCCTTCAAAGATATAGACCAAT............................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................TCAAAGATATAGACC............................................................................................................................................................................... 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................AGCGCAAAAGCCAAGAATTA................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............GTTGTATAGCGCAAAAGCCAAGAA.................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................................................CACGCAAAGCGCTGACATTCT................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................AGCCAAGAATTATTAGGTTA......................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................AGACAACCTTCTGCAATCGTT....................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................TTGTGGATTTTTTCCATAGGAC........................................................................................................................................................ 22 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.......................CGCAAAAGCCAAGAATTATT............................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......................GCGCAAGAGCCAAGAATTATT............................................................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
............GTGTTGAATAACGCAAAACCC......................................................................................................................................................................................................................... 21 3 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0
...................................GGATTATTAGGTTAAC....................................................................................................................................................................................................... 16 1 7 0.14 1 0 0 0 0 0 0 0 0 0 0 1
..CTGCCATGTTGTGTTGT....................................................................................................................................................................................................................................... 17 2 15 0.07 1 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................ACAGTCTTGACAAAG............................................................................... 15 1 15 0.07 1 0 1 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:20453075-20453324 - dsi_22221 ATGA-TGGAACAACA--CAACA----------TATCGCGTTTTCGGTTCTTAATAATCCAATTGTAAGTCGGAAGTTTCTATATCTGGTTACACCGCAAAAAGGTA-----TCCTGTTTGGTATAATTTCTGTTGGAAGACGTTAGCAAAGA--AAATGG-GAACCCAATTTGATGTTGTCACAACTGTTTCCCCGGCGTTATTACGACTAAACTGTGCGTTTCGCGACTGTAAGACAAGTTAG-----------CAG-GATTTACGTTTCTT-------AATTACAATT--------------
droSec2 scaffold_55:92114-92363 - ATGA-TGGAACAACA--CAACA----------TATCGCGTTTTCGGTTCTTAATAATCCAATTGTAAGTCTGAACTTTCTATATCTGGTTACACCGCAAAAAGGTA-----TCCTGTTTGGTATAATTTCTGTTGGAAGACGTTAGCAAAGA--AAATGG-GAACCCAATTTGATGTTGTCACAACTGTTTCCCCGGCGTTATTACGACTAAACTGTGCGTTTCGCGACTATAAGACAAGTTAG-----------CAG-GATTTACGTTTCTT-------AATTACAATT--------------
dm3 chrX:21936245-21936486 - ATGA-TGGAATA--------------------TATCGCGGTTTCGGTTCTAAATCATCCAATGGTAAGTCGGAACTTTCTATATCTGGTTACAGCGCAAAAAGGTA-----TATTGTTTGATATAATTTCTGTTGGAAGACGTTAGCAAACA--AAATGG-AAACCCAATTTGATGTTGTCACAACTGTTTCCCCGGCGTTATTACAACTAAACTGTGCGTTTCGCGACTGTAAGACAAGTTAG-----------CAG-GATTTACGTTTCTT-------AATTACAATT--------------
droEre2 scaffold_4690:18307686-18307944 - ATGA-TGGATTATCATCGAA-GCCCGCTCGATTATCGCGGCTTCGGCTCTAAGTCGGCAAATTGTGGTTTGGAACTTTCTATATATGGTTACAGCGCAAAAAGGTG-----TGCCGAATGATACAACTTCTGTTGGAAGACTTTAGCAAACT--AAGTGG-AAAACCAATTCGGTGTTGTCACAACTGTTTC-TCGGCATTTTTACGTCTAAACTGTGCATTTCGGGACTATAAGTCAAGTTAG-----------CAG-GATGTACGTTT-TT-------AATTACAATT--------------
droYak3 X:21375734-21375965 - ATGA-AGGAACAACT--AG-------CTCGAATAGAGCGGTTTCGGTTCTAAATCGTC-----------------TTTCTTTATCTGGTTACAGCGCAAAAGGGAA-----TGCTGAATGGTAAAATGTATGTTGGAAGACTTTAGCAAACG--AAATGG-GAAACCAATTTGATG---TCACAACTGTTGC-TCGGCATTTTTACGACTAAACTGTGCATTTCGGGACTTTAAGGCAAGTTAG-----------CAG-GATTTACGCTTCTT-------AATTACAATT--------------
droEug1 scf7180000408987:495734-495979 + ATATGTAGAAGAAGA--TCCCA-----TAGATTTTTACGGCTTGGGTTATGAGCCACTCCATTCTAATTCAGAAAACTACCCATCTGATTACAATAATTAAGGTAA-----TGTAAAACGGTACAACTTATCATGGAAGACATCAGCGAATG--AAATAA-GAAACCAAGTTGATGTCTTAACAACTATTTTTTGGGCA----TATGATCAAGCTGTGCATTTTAGGACCATCAAA--AGCTGA-----------CATAGGTTTG-GATT-----------ATCAAATTT--------------
droBia1 scf7180000302244:161496-161607 - ATA--------------------------------------------------------------------------------CCTGGTTG----------AGGGTTTCTATGTGGGAGGATGC-ACTTCTGCTGGAAGACATC---AAACC--AAATGGGGAAACCACTTCGATGCTTTCGCAGCTGT--------------------------------------------------------------------------TACGTTTTTG-------ATTTATAAT---------------
droTak1 scf7180000415324:187824-188061 - ATGA-C---------------------------TTTACGACTTCGGTTCTGAACCACCGTAGTGTAATTTAGAACATTCAAG------TT----------AAGGTA----TTGTAAAGCGATACAACTTCTGTTGGAAGACATCAGCAAACG--AAATGG-GAAACCAATTTGATGTTGTCACAACTGTTTTTTCAGTATGTACACGATGAGATGAAAC-TTTTAGTACTATAAGACAG-TGAACATGTTGGATGTAG-GATTTATATCCTTGCAGAGGATATTATAATT------------TC
droEle1 scf7180000491087:857312-857514 + TTG---GAAATGACT--TCA-A-----T---------CGAATTATTTTCTGAGTCATCCTATGGTAATTCGTAACTTTCTAAATCTAGTTACAGTGCGTTATGGTA----TTGTATAACGATACAACTTTAGTTGGAAGACATCAGCGAACG--AAATGG-GAAACCAATTTTGTGTGGTCACAACTGTTTT---------------------------------AAACTATAATTCAGCTGCG-----------CAG-AATTTACCTTT---------------GAATA--------------
droRho1 scf7180000778730:20069-20325 + TTG---GAAACGACT--CCA-A-----T---------CAATTTATGTTCTGAGTCATCTTGCTGTAATTCGAACCTTTCTATATCTAGTTACAGTGCATTATGGTA----TTGTAGAACGATACAACTTCTGTTGGAAGACATCGGCGAACG--AAATTA-GAAACCAATTCTATGTTGTCACATCTGTTTT-TCGGCATGTGTACGATCAAACTGTGCGTTTCAGGACTATAAGACAGCTGCG-----------CAG-AATTTGCGATTTTA-------AATTAAAATCCGAATTCAATGTTG
droFic1 scf7180000454116:201274-201498 - TTTG--GGAATGACT--GAA-G-----TCAATATTCACGCCTGCGCTTCTGATTTATTCTAGTGTATTTCGGAACTTTTAGC------CTGTAGCCCAGAAA--------------TCGGATACAACTCCAGTTGGAAGACACCAGAAATCG--AGATGGAGAAACCAATTTTGTGTTGCCACAACTGTTCT-TCGGCGTATTCGCTATCATACTGTGCGTTTCAGGACTATAAGACAGTTGCG-----------CTG-GACC--------TT-------AAGCA-------------------
droBip1 scf7180000396425:171606-171706 - -----------------------------------------------------------------------------------------------------------------------GATACAACTTCAGTTGGAAGACATTGGCGAACGCGAAGTGG-GAAACCAATTTTCTAT--TCACAACTGTGT-------------GCTCCAGGACAGTGCGTTTCAAGAGTGTACGA--------------------------------------------------------------------
droWil2 scf2_1100000004401:369519-369560 + TGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACAATTTAA-----------GAG-AGTTTGCGTTTCTT-------CATTTCATTT--------------
droMoj3 scaffold_6496:6120417-6120425 + ATTA-TATGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATGA-TGGAACAACA--CAACA----------TATCGCGTTTTCGGTTCTTAATAATCCAATTGTAAGTCGGAAGTTTCTATATCTGGTTACACCGCAAAAAGGTA-----TCCTGTTTGGTATAATTTCTGTTGGAAGACGTTAGCAAAGA--AAATGG-GAACCCAATTTGATGTTGTCACAACTGTTTCCCCGGCGTTATTACGACTAAACTGTGCGTTTCGCGACTGTAAGACAAGTTAG-----------CAG-GATTTACGTTTCTT-------AATTACAATT--------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................TGTGCGTTTCGCGACTGTAAGACAAGT...............................................................2713.00300000021000000000
................................................................................................................................................................................................................CTAAACTGTGCGTTTCGCGAC...........................................................................2112.00201000010000000000
.............................................................................................................................................................................................................................TTCGCGACTGTAAGACAAGT...............................................................2012.00210000010000000000
..............................................................................................................................................................................TGTTGTCACAACTGTTTCCCCGGCGTTAT.....................................................................................................2912.00200000000000002000
....................................................................................................................................................................................................................................CTGTAAGACAAGTTAG-----------CAG-GA...........................................2112.00200000002000000000
............................................................................................................................................................ATGG-GAACCCAATTTGATGTT..............................................................................................................................2112.00200000002000000000
.....................................................................................................................................TGGAAGACGTTAGCAAAGA--AAATGG-GA.............................................................................................................................................2712.00200000020000000000
................................................................................................................................................................................................................................GCGACTGTAAGACAAGTTAG-----------CAG-GATTTA.......................................2912.00200000000000002000
............................................................................................................................................................................................................ACGACTAAACTGTGCGTTTCG...............................................................................2112.00200010000001000000
.....................................................................................................................TTGGTATAATTTCTGTTGGAA......................................................................................................................................................................2111.00100000010000000000
...........................................................................................................................................................AATGG-GAACCCAATTTGATGTTGT............................................................................................................................2411.00100000000000100000
................................................................TAAGTCGGAAGTTTCTATATC...........................................................................................................................................................................................................................2111.00110000000000000000
.............................................................................TCTATATCTGGTTACACCGCAAAAAGG........................................................................................................................................................................................................2711.00100000010000000000
................................................................................................................................................................................................................................GCGACTGTAAGACAAGTTAG-----------CAG-GAT..........................................2611.00100000000000001000
...............................................................................................................................................TAGCAAAGA--AAATGG-GAACCCAATT.....................................................................................................................................2511.00100000010000000000
.........................................................................................TACACCGCAAAAAGGTA-----TCCTGTTTGGTA.....................................................................................................................................................................................2911.00100000010000000000
............................................................ATTGTAAGTCGGAAGTTTC.................................................................................................................................................................................................................................1911.00100100000000000000
.......................................................ATCCAATTGTAAGTCGGAAGT....................................................................................................................................................................................................................................2111.00110000000000000000
.......................................................................................................................................................................................................TTATTACGACTAAACTGTGCG....................................................................................2111.00101000000000000000
............................................................................................................................................................................................................................TTTCGCGACTGTAAGACAAG................................................................2011.00100000001000000000
....................................................................................................................TTTGGTATAATTTCTGTTGGA.......................................................................................................................................................................2111.00100000010000000000
......................................................................................................................................................................................CAACTGTTTCCCCGGCGTTAT.....................................................................................................2111.00100001000000000000
...............................................................................................................TCCTGTTTGGTATAATTTCTGTTGGAAGA....................................................................................................................................................................2911.00100000010000000000
..................................................................................................................................TGTTGGAAGACGTTAGCAAAGA--AAA...................................................................................................................................................2511.00100000010000000000
.....................................................................................................................................................................................ACAACTGTTTCCCCGGCGTTT......................................................................................................2111.00100000000000010000
...........................................................................................................................TAATTTCTGTTGGAAGACGTTAGC.............................................................................................................................................................2411.00100000010000000000
...................................................................................................................................................................................................................AACTGTGCGTTTCGCGACT..........................................................................1911.00101000000000000000
..................................................................................................................................................................................................................................GACTGTAAGACAAGTTAG-----------CAG-GATTT........................................2611.00100000000000001000
.........................................................................................................................................................................................CTGTTTCCCCGGCGTTATTAC..................................................................................................2111.00110000000000000000
......GGAACAACA--CAACA----------TATCGCGTTTTCGGTA................................................................................................................................................................................................................................................................3011.00100000010000000000
.........................................................................................................................TATAATTTCTGTTGGAAGACG..................................................................................................................................................................2111.00100010000000000000
....................................................................................................................................................................................CACAACTGTTTCCCCGGCGTT.......................................................................................................2111.00100000010000000000
..............................................................................................CGCAAAAAGGTA-----TCCTGTTTGGTA.....................................................................................................................................................................................2411.00100000010000000000
..........CAACA--CAACA----------TATCGCGTT.......................................................................................................................................................................................................................................................................1911.00100000000001000000
............................................................................................................................................................................................................................................CAAGTTAG-----------CAG-GATTTACGTT...................................2111.00100000010000000000
.........................................TTCGGTTCTTAATAATCCAATTGTAAGT...........................................................................................................................................................................................................................................2811.00100000010000000000
droSec2
ATGA-TGGAACAACA--CAACA----------TATCGCGTTTTCGGTTCTTAATAATCCAATTGTAAGTCTGAACTTTCTATATCTGGTTACACCGCAAAAAGGTA-----TCCTGTTTGGTATAATTTCTGTTGGAAGACGTTAGCAAAGA--AAATGG-GAACCCAATTTGATGTTGTCACAACTGTTTCCCCGGCGTTATTACGACTAAACTGTGCGTTTCGCGACTATAAGACAAGTTAG-----------CAG-GATTTACGTTTCTT-------AATTACAATT--------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................GTTGTCACAACTGTTTCCCCGG...........................................................................................................2211.0011000
...............................................TCTTAATAATCCAATTGTAAG............................................................................................................................................................................................................................................2111.0011000
..............................................................................................................................................................................TGTTGTCACAACTGTTTCCCC.............................................................................................................2111.0011000
.....................................................................................................................................................................................ACAACTGTTTCCCCGGCGTTA......................................................................................................2111.0011000
.......................................................................................................................GGTATAATTTCTGTTGGAAGA....................................................................................................................................................................2111.0010100
................................................................................................CAAAAAGGTA-----TCCTGTTTGGT......................................................................................................................................................................................2111.0010001
dm3
ATGA-TGGAATA--------------------TATCGCGGTTTCGGTTCTAAATCATCCAATGGTAAGTCGGAACTTTCTATATCTGGTTACAGCGCAAAAAGGTA-----TATTGTTTGATATAATTTCTGTTGGAAGACGTTAGCAAACA--AAATGG-AAACCCAATTTGATGTTGTCACAACTGTTTCCCCGGCGTTATTACAACTAAACTGTGCGTTTCGCGACTGTAAGACAAGTTAG-----------CAG-GATTTACGTTTCTT-------AATTACAATT--------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................TCTATATCTGGTTACAGCGCAAAAAGG........................................................................................................................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001030000100000000000000000000000000
............................................................................TTCTATATCTGGTTACAGCGCAAAAAGG........................................................................................................................................................................................................2815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
.................................................................................TATCTGGTTACAGCGCAAAAAGGTA-----.................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................TCATCCAATGGTAAGTCGGAACTTTC.................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................TATCTGGTTACAGCGCAAAAA..........................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000
................................................................................................................................TCTGTTGGAAGACGTTAGCAAACA--AAA...................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................ATCCAATGGTAAGTCGGAACT....................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................AATGG-AAACCCAATTTGATGT...............................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000010000000000000000000000000000000000000000000000000000
.TGA-TGGAATA--------------------TATCGCGGTTTCGGT.................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000100000000000000000
...................................................AATCATCCAATGGTAAGTCGG........................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................CGCGACTGTAAGACAAGTTAG-----------.................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................................................................TAAGACAAGTTAG-----------CAG-GATTT........................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000
..........................................................................................................................................................................................................................................GACAAGTTAG-----------CAG-GATTTACG.....................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................TGTGCGTTTCGCGACTGTAAGACAAGT...............................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................TCTGGTTACAGCGCAAAAAGGTA-----TA...............................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................ATCTGGTTACAGCGCAAAAAG.........................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................TCGCGACTGTAAGACAAGTTAG-----------CAG-GA...........................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002
......................................................................................................................................................................................................................TGTGCGTTTCGCGACTGTAAGACAAG................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................TGTAAGACAAGTTAG-----------CAG-GAT..........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................TTGGAAGACGTTAGCAAACA--AA....................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....TGGAATA--------------------TATCGCGGTTTCGT..................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................GTTGGAAGACGTTAGCAAACA--......................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................TTACAGCGCAAAAAGGTA-----TATTG............................................................................................................................................................................................2311.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................TTTCGCGACTGTAAGACAAGT...............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
.......................................................................................................................................................................................................................................TAAGACAAGTTAG-----------CAG-GATTTACGTT...................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................TGTTGTCACAACTGTTTCCCCGGCGT........................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................AACTGTGCGTTTCGCGACTGT........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................TTGATATAATTTCTGTTGGAAGACGT.................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................AAATCATCCAATGGTAAGTCGG........................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
................................TATCGCGGTTTCGGTTCTAAA...........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................................................................................................GTTTCGCGACTGTAAGAC...................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................TCGGTTCTAAATCATCCAAT..................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................GTTCTAAATCATCCAATGGT...............................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................ATATCTGGTTACAGCGCAAAAA..........................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................ACTGTAAGACAAGTTAG-----------CAG-G............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................................................TCATCCAATGGTAAGTCGGA.......................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........ATA--------------------TATCGCGGTTTCGGTTCT..............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................CAAGTTAG-----------CAG-GATTTACGTTTCT................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TTACAACTAAACTGTGCGTTT.................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................CGGCGTTATTACAACTAAACT.........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................................................TGGTAAGTCGGAACTTTCTATATCTGGT.......................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TAAGTCGGAACTTTCTATATC...........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................TAAGACAAGTTAG-----------CAG-GATTTACGT....................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................ATTTCTGTTGGAAGACGTTAGC.............................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................ACTAAACTGTGCGTTTCGCGA............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................TTATTACAACTAAACTGTGCG....................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................A--AAATGG-AAACCCAATTTGATGTTGT............................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................ATATCTGGTTACAGCGCAAAA...........................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TCTGTTGGAAGACGTTAGCAAAA.........................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................AACTAAACTGTGCGTTTCGCG.............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................................GTAAGACAAGTTAG-----------CAG-GATT.........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................CCGGCGTTATTACAACTAAAC..........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
ATGA-TGGAATA--------------------TATCGCGGTTTCGG..................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.................................................................................................................................................................................................................................................TAG-----------CAG-GATTTACGTTTCTT-------AATTACAA................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................GTAAGTCGGAACTTTCTATATC...........................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...........................................................................TTTCTATATCTGGTTACAGCG................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................TTTCCCCGGCGTTATTACAACT..............................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...A-TGGAATA--------------------TATCGCGGTTTCGGTTC...............................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................CGGAACTTTCTATATCTGGTT......................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................TGTTTCCCCGGCGTTATTACA.................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................CAAGTTAG-----------CAG-GATTTACGTT...................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.....TGGAATA--------------------TATCGCGGTTTCGGTTCTAA............................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GAATA--------------------TATCGCGGTTTCGGTT................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................TAGCAAACA--AAATGG-AAACCCAATT.....................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TTCTAAATCATCCAATGGTAAGTCGGA.......................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................TCTGGTTACAGCGCAAAAAGG........................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............................................................................................................................................................................................................ACAACTAAACTGTGCGTTTCG...............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
ATGA-TGGAATA--------------------TATCGCGGTT......................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...............................................................................TATATCTGGTTACAGCGCAAAAAGG........................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................................................................................TCGCGACTGTAAGACAAGTTA.............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
...................................................................................TCTGGTTACAGCGCAAAAAGGTA-----TATTG............................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................AAGTTAG-----------CAG-GATTTACGTT...................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
ATGA-TGGAATA--------------------TATCGCGGTTTCGGT.................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................CCGGCGTTATTACAACTAAACTGTGCGTTTCGCG.............................................................................3411.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ATGA-TGGATTATCATCGAA-GCCCGCTCGATTATCGCGGCTTCGGCTCTAAGTCGGCAAATTGTGGTTTGGAACTTTCTATATATGGTTACAGCGCAAAAAGGTG-----TGCCGAATGATACAACTTCTGTTGGAAGACTTTAGCAAACT--AAGTGG-AAAACCAATTCGGTGTTGTCACAACTGTTTC-TCGGCATTTTTACGTCTAAACTGTGCATTTCGGGACTATAAGTCAAGTTAG-----------CAG-GATGTACGTTT-TT-------AATTACAATT--------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................TACAGCGCAAAAAGGTG-----TGCC.............................................................................................................................................................................................2111.0010000010
.............................................................................................................................................................................................................CGTCTAAACTGTGCATTTCGG..............................................................................2111.0011000000
droYak3
ATGA-AGGAACAACT--AG-------CTCGAATAGAGCGGTTTCGGTTCTAAATCGTC-----------------TTTCTTTATCTGGTTACAGCGCAAAAGGGAA-----TGCTGAATGGTAAAATGTATGTTGGAAGACTTTAGCAAACG--AAATGG-GAAACCAATTTGATG---TCACAACTGTTGC-TCGGCATTTTTACGACTAAACTGTGCATTTCGGGACTTTAAGGCAAGTTAG-----------CAG-GATTTACGCTTCTT-------AATTACAATT--------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................CTGGTTACAGCGCAAAAGGGA.......................................................................................................................................................................................................2111.00101000000000
droEug1
ATATGTAGAAGAAGA--TCCCA-----TAGATTTTTACGGCTTGGGTTATGAGCCACTCCATTCTAATTCAGAAAACTACCCATCTGATTACAATAATTAAGGTAA-----TGTAAAACGGTACAACTTATCATGGAAGACATCAGCGAATG--AAATAA-GAAACCAAGTTGATGTCTTAACAACTATTTTTTGGGCA----TATGATCAAGCTGTGCATTTTAGGACCATCAAA--AGCTGA-----------CATAGGTTTG-GATT-----------ATCAAATTT--------------SizeHit CountTotal NormTotal
No Reads
droBia1
ATA--------------------------------------------------------------------------------CCTGGTTG----------AGGGTTTCTATGTGGGAGGATGC-ACTTCTGCTGGAAGACATC---AAACC--AAATGGGGAAACCACTTCGATGCTTTCGCAGCTGT--------------------------------------------------------------------------TACGTTTTTG-------ATTTATAAT---------------SizeHit CountTotal NormTotal
No Reads
droTak1
ATGA-C---------------------------TTTACGACTTCGGTTCTGAACCACCGTAGTGTAATTTAGAACATTCAAG------TT----------AAGGTA----TTGTAAAGCGATACAACTTCTGTTGGAAGACATCAGCAAACG--AAATGG-GAAACCAATTTGATGTTGTCACAACTGTTTTTTCAGTATGTACACGATGAGATGAAAC-TTTTAGTACTATAAGACAG-TGAACATGTTGGATGTAG-GATTTATATCCTTGCAGAGGATATTATAATT------------TCSizeHit CountTotal NormTotal
No Reads
droEle1
TTG---GAAATGACT--TCA-A-----T---------CGAATTATTTTCTGAGTCATCCTATGGTAATTCGTAACTTTCTAAATCTAGTTACAGTGCGTTATGGTA----TTGTATAACGATACAACTTTAGTTGGAAGACATCAGCGAACG--AAATGG-GAAACCAATTTTGTGTGGTCACAACTGTTTT---------------------------------AAACTATAATTCAGCTGCG-----------CAG-AATTTACCTTT---------------GAATA--------------SizeHit CountTotal NormTotal
No Reads
droRho1
TTG---GAAACGACT--CCA-A-----T---------CAATTTATGTTCTGAGTCATCTTGCTGTAATTCGAACCTTTCTATATCTAGTTACAGTGCATTATGGTA----TTGTAGAACGATACAACTTCTGTTGGAAGACATCGGCGAACG--AAATTA-GAAACCAATTCTATGTTGTCACATCTGTTTT-TCGGCATGTGTACGATCAAACTGTGCGTTTCAGGACTATAAGACAGCTGCG-----------CAG-AATTTGCGATTTTA-------AATTAAAATCCGAATTCAATGTTGSizeHit CountTotal NormTotal
No Reads
droFic1
TTTG--GGAATGACT--GAA-G-----TCAATATTCACGCCTGCGCTTCTGATTTATTCTAGTGTATTTCGGAACTTTTAGC------CTGTAGCCCAGAAA--------------TCGGATACAACTCCAGTTGGAAGACACCAGAAATCG--AGATGGAGAAACCAATTTTGTGTTGCCACAACTGTTCT-TCGGCGTATTCGCTATCATACTGTGCGTTTCAGGACTATAAGACAGTTGCG-----------CTG-GACC--------TT-------AAGCA-------------------SizeHit CountTotal NormTotal
No Reads
droBip1
-----------------------------------------------------------------------------------------------------------------------GATACAACTTCAGTTGGAAGACATTGGCGAACGCGAAGTGG-GAAACCAATTTTCTAT--TCACAACTGTGT-------------GCTCCAGGACAGTGCGTTTCAAGAGTGTACGA--------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droWil2
TGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACAATTTAA-----------GAG-AGTTTGCGTTTCTT-------CATTTCATTT--------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droMoj3
ATTA-TATGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads

Generated: 05/18/2015 at 06:19 PM