ID:

dsi_22179

 Coordinate:

2l:12052572-12052824 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-25.4 -25.2 -25.1

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+
AT_richLow_complexityLow_complexity+

Sense Strand Reads

CAGCGCCCTTCAAGCGGCAGCTGCCGGCGTGGTTGGCAAGCAGATCGAGGGTAAGCTTAAATTACAATTTAAAAAAATTAATTTTTACTGCAAATATATAAAAAAGCGACTTCTTTACAACGAAAAAATGTATATAAGAGCACTTAATTTATAAAGGTATCTAGAAGTACGCCACATTATCGTCTCATTCAAGATTTTTAATGGATTTTTTTGTGCAATAACGATACCTTAAATTAATTAAATAACTTTTAACTTTGAATCTATATTTATTAATACTAAATAAATATGACTTTCTCCAACCAGGTCCCGATGGCAGCAATCTTTTCATTTATCACCTACCTCAGGAGTTCATT
**************************************************((((.......)))).(((((((...............(((..(((((((......((............))......)))))))....))).((((((((...(((((((.....(((((...(((((..((((......))))...)))))........)))))......)))))))))))))))(((((.....))))).))))))).((((((((((.......))))))))))...............************************************************** 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
...........AAGCGGCAGCTGCCGGCGTGGTT............................................................................................................................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................CTCATTCAAGATTTTTAATG...................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
..GCGCCCTTCAAGCGGCAGCTGCCGGCGTG.................................................................................................................................................................................................................................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0
..................................GGCAAGCAGATCGAGGGTC............................................................................................................................................................................................................................................................................................................ 19 1 1 1.00 1 0 1 0 0 0
................................................................................................................................................TAATTTCTAAAGGTCTCTAGT............................................................................................................................................................................................ 21 3 5 0.20 1 0 0 1 0 0
..........................................................................................................................................................................GCCATATGATCGTCTCA...................................................................................................................................................................... 17 2 7 0.14 1 0 0 0 1 0
.................................................................................................................................................................................TATCGTGTCATTCAAAA............................................................................................................................................................... 17 2 20 0.10 2 0 0 0 1 1
.............................TGGTTGGTAAGCAGAAC................................................................................................................................................................................................................................................................................................................... 17 2 18 0.06 1 0 0 1 0 0
...................GCTGCCGGCGTTGATGGGAA.......................................................................................................................................................................................................................................................................................................................... 20 3 18 0.06 1 0 0 1 0 0
...................................GCGAGCAGATCGAGAGT............................................................................................................................................................................................................................................................................................................. 17 2 19 0.05 1 0 0 1 0 0
........................................CATATCGACGGTAAGGTT....................................................................................................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 1

Anti-sense strand reads

GTCGCGGGAAGTTCGCCGTCGACGGCCGCACCAACCGTTCGTCTAGCTCCCATTCGAATTTAATGTTAAATTTTTTTAATTAAAAATGACGTTTATATATTTTTTCGCTGAAGAAATGTTGCTTTTTTACATATATTCTCGTGAATTAAATATTTCCATAGATCTTCATGCGGTGTAATAGCAGAGTAAGTTCTAAAAATTACCTAAAAAAACACGTTATTGCTATGGAATTTAATTAATTTATTGAAAATTGAAACTTAGATATAAATAATTATGATTTATTTATACTGAAAGAGGTTGGTCCAGGGCTACCGTCGTTAGAAAAGTAAATAGTGGATGGAGTCCTCAAGTAA
**************************************************((((.......)))).(((((((...............(((..(((((((......((............))......)))))))....))).((((((((...(((((((.....(((((...(((((..((((......))))...)))))........)))))......)))))))))))))))(((((.....))))).))))))).((((((((((.......))))))))))...............************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
......................................................................................................................................................................................................................................................................................................AGGTTGGTCCCGGGCTAC......................................... 18 1 1 2.00 2 0 2 0 0 0
...................................................................................................................................................................................................ACAACTACCTAACAAAACACGT........................................................................................................................................ 22 3 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................................................................................................................................GTTGGTCCCGGGCTAC......................................... 16 1 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................................AAAAAAAATTATTGCTATGGAAT.......................................................................................................................... 23 3 4 0.25 1 0 0 1 0 0
........................................................................................................................................................................................................................................................................................................TTTGGTCCAGGGCTACCT....................................... 18 2 4 0.25 1 1 0 0 0 0
..............................................................................................................................................................................................................................................................................................................CCAGGGCTACCGTTGTCA................................. 18 2 4 0.25 1 0 0 0 1 0
..........................................................................................................................................................................................................................................................TTAAAACTTAGATATAAATTATTGT.............................................................................. 25 3 5 0.20 1 0 0 1 0 0
.............................................................................................................................................................................................................................................................................................................TCAAGGGCTTCCGTGGTTAG................................ 20 3 6 0.17 1 0 0 0 0 1
.....................................................................................................................................................................................................................................................................................................AAGGTTGGTCCCGGGC............................................ 16 2 20 0.15 3 0 0 0 0 3
.............................................................................................................................................................................................................................................................................................................TCAAGGGCTTCCGTGGTTA................................. 19 3 18 0.11 2 0 0 0 1 1
.................................................................................................................................................................................................................ACACAAGTTAATGCTATGGA............................................................................................................................ 20 3 10 0.10 1 0 0 1 0 0
.............................................................................................................................................................................................................................................................................................................CCCAGGGCTACCGACGT................................... 17 2 12 0.08 1 0 0 0 1 0
..........................................................................................................................................................................................................................................................TTGAAACCTAGATACAAA..................................................................................... 18 2 20 0.05 1 1 0 0 0 0
.........................CCGCGCCAATCGTTCG........................................................................................................................................................................................................................................................................................................................ 16 2 20 0.05 1 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:12052522-12052874 + dsi_22179 CAGCGCCCTTCAAGCGGCAGCTGCCGGCGTGGTTGGCAAGCAGATCGAGGGTAAGCTTAAATTACAATTTAAAAA-----AATTAATTTTTACTG-CA------------AATATA-TA-------------------------------A-AAAAGCGACTTCTTTACAACGAA---------------------------------------------------------------AAAATGTA---TA-----------------------------------------TAAGAGCACTTA---------------------------------ATTTATAAAGGTATCTAGAAGTAC-----GCC--A----------------C---ATTATCGTC-TC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCAAGATTTTTAATGGATTT------------------------------------------------------------------TTTTGTGCAATAACGATACCTTAAATTAATTAAATAA--------------------------------------------CTTT-------TAACTTTGA---------------------------------------------------------ATCTATATTTATTAATACTAAATAAATATGACTTTC-------------------TCCAA--CCAGGTCCCGATGGCAGCAATCTTTTCATTTATCACCTACCTCAGGAGTTCATT
droSec2 scaffold_16:586695-587071 + CAGCGCCCTTCAAGCGGCAGCTGCCGGCGTGGTTGGCAAGCAGATCGAGGGTAAGCTTAAGTTACAATTTAAAA------AAT---TTTTTACTT-CA------------AATATC-TAAA-----------------------------A-ACAAGCAACCTCTTTAAAACGAA---------------------------------------------------------------AAAATGTA---TA-----------------------------------------TAAGAGCACTTA---------------------------------CTTTAAAAATGTATCTAGAAGTAC-----GCC--A----------------C---ATTATCGTC-TC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCAAGATTTTTAATGGATTCATCCATGTTATTATCATACATC----------------------------------------AAACTTTTGTGCAAAAACGATACCTTAAATCAATTAAATAA--------------------------------------------CTTT-------TAACTTTGA---------------------------------------------------------ATTTATATTTGTTAATACTAAATAAATATGACTTTC-------------------TCCAA--CCAGGTCCCGATGGCAGCAATCTTTTCATTTATCACCTACCTCAGGAGTTCATT
dm3 chr2L:12395991-12396342 + CAGCGCCCTTCAAGCGGCAGCTGCCGGCGTGACTGGCAAGCAGATCGAGGGTAAGCTTCAATTACAAAATAA---A---AATTCAATTTGTACTG-CA------------AATACTTTAAA-----------------------------A-AAAAACGACCTCTTAACAACAAA---------------------------------------------------------------AAAAAATA---TA---------------------------------------TAAACGAGCACTTA---------------------------------CTTTATAAAGGAATCTAGAAGTAC-----GCC--A----------------G---ATTACCTTC-TC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCAAAATTTTTAATGGATTCATCCATGCTATTATCATACATC----------------------------------------TAACTTTTGTGCAAT------A----------------------------------------------------------------------------CCTTTGA---------------------------------------------------------ATCTATATGTATTAATACTAAATACTTATGACTTTC-------------------TCCGA--CCAGGTCCCGATGGCAGCAATCTTTTCATTTATCACCTACCTCAGGAGTTCATT
droEre2 scaffold_4929:13020144-13020553 - CAGCGCCCTTCAAGCGGCAGCTGCCGGCGTGACTGGCAAGCAGATCGAGGGTAAGGTTCAATTACGGAGAAC---A---CTTTTGATTGGTACTG-CA------------AATATC-TG-------------------------------C-ACAGGGCACCTTTTTCCAACGAG---------------------------------------------------------------AA-ATGTAG---------GGCCACAAAAATGATATGCTCTTACAAATATTTATAAAGCAGCAC-----------------------------------------------------------------T--GCA--------------------------GTT-TA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTT---ATGTTCAACGGATTTATCCGTGTTTGCATATTACATTTTTAATCCTTTTTTAAAA-----------TTAGCATCATTAAATTTCTGTG-----AAGATAGCTGTTATCAATTAAAGAAATCTTCTT-AACCTAAAACATAGCATGAATG-----------TC-------------------------------------------------------------------------------------CTATTGATACTAAATAAATCTTACTTTC-------------------TCCGA--CCAGGTCCCGATGGCAGCAATCTTTTCATTTATCACCTACCTCAGGAGTTCATT
droYak3 2L:8831715-8832071 + CAGCGCCATTCAAGCGGCAGCTGCCGGCGTGGCTGGCAAGCAGATCGAGGGTAAGCTTCAATTAGAAGGGAA---A---CAATTAATTTGTAAGG--------------------------------------------------------------ATAACTCTTTTTAAGAAG----------------------------------------------------------------AAATTTA--------------------------------------------TAAGACAGCACTTA---------------------------------C----------------------------GCA--G---------------------------GG-CC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATT-------------------------CCA-------------------------------------------AAAT--A----------------GTTCACGATGTTCAATGAACTTATCCATGTTTTTATCTTTCATTT-GAATCATTT----------------------------TAAATTTGTGTGCAGTGTAGATACCTAT-----------------TTCTT-ACCTTGAAAAATATTATGAATGTTTAGAAAATTTC-------------------------------------------------------------------------------------CGATTAATACTACATAAATGTCACTTTC-------------------TCCAA--CCAGGTCCCGATGGCAGCAATCTTTTCATTTATCACCTACCTCAGGAGTTCATT
droEug1 scf7180000409122:782317-782436 + TTTA-------------------------------------------------------AGTTAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATATT--------------------------------------------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------TCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAACAATA-------------------------------------------------------------------------------------------------------------ATTATCTCCTATTATTTATTTCCTCC-------------------CAAAA--CCAGGTCCCGATGGCAGCAATCTATTCATTTATCATCTACCTCAGGAGTTCATT
droBia1 scf7180000302422:586316-586767 - CAGCGCCCTTCAAGCGGCCGCTGCGGGCGTGGCTGGCAAACAGATTGAGGGTAAGAA------------------AGCGT---TCT-------------TTGATATATATTTATTC-CCAAAATAAAT----GTTTA--------------------------------AACGAG------------AAACGAAATATTATATTA-----------------------------------------------------------------AACGCAAATTAATAAAATTCAAAAG---------------------------------------------------------------TAC-----ACATCAGTTGGTACTTTAATGACATTATTTTCGACTTCATACATTATATTTAATGTCTGTTTTTTTTTAAAGCTTTACATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTCCTTAT----------------------------------------------------------------------------------------------------------ATCTAATAATAAATAAAATAATAATCAAAAACCTAAAACATATTCCGTT---------------TACT-TTG------TGTTTCTATAACACTTGTTTACAAGAATACATTTGTTTCCTAGCTCCGCTATAAAATCGCAA-T--TATAAATATTTAAAATAAATATTTTATCCTTTT-------------------TCCAA--TTAGGTCCGGATGGCAGCAATCTGTTCATTTATCACCTACCTCAGGAGTTCATT
droTak1 scf7180000415865:206645-206993 - CAGCGCCCTTCAGGCGGCTGCCGCGGGAGTGGCTGGCAAACAGATTGAGGGTAAGCTTAAAATAAA--TTAAAAA-----AAT------------------------------------------TAA----ATT-------AAATTAAA-------------------------G----------------------------------------------------------------------------------------------------------------------AAAATAATTA---------------------------------T----------------------------GAA--A-----------------------------------------------------------------GTATTAAAAATATATAGAAAATCAA----------TACACGTTCACTTACCTTTCATTTACAATG---AAAATTTACTAAAAAATAAATTATAAAATCCAATGTAAAAAAAAAAAATTTTAGTTTCTTATAACTTTTTG------------GTGTTGTTCTTTCATTATTATTCTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCTCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACCACTAAAAATTTCTTCTTCTT-------------------CACAA--TCAGGCCCCGATGGCAGCAATCTGTTCATTTATCACCTACCTCAGGAGTTCATT
droEle1 scf7180000491028:2724022-2724149 - AACTTAA-----ATAGGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGTT-------------------------GAA-------------------------------------------AAATTTAATTTATATTTCTTATG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCTACTAAACATTATTTCGTCTT-------------------CCCAA--CCAGGTCCCGATGGCAGCAATTTATTCATTTACCACTTACCTCAGGAGTTCATT
droRho1 scf7180000780043:244616-245065 + CAGCGCCCTTCAAGCGGCAGCTGCGGGCGTGGCTGGCAAACAGATAGAGGGTAAGCTTAAGTTAAATG---------------------------------------------------ATGATATTGCTTCATAATAATAG--------CTAC-AGGTATTTTTATTTAA-AAT----------------AA------------------------------------------------ATAAAGGAAAAAACAGGTCTTTAAGATG-TATCTAACTAAAAAAAATTAAAAAG---------------------------------------------------------------TTTAATCCT--ATA--------------------------ATT-AA--------------------------------------------------------------------------A---------------------------------------------------------------------------------------------TTTG------------GTGCCGAACATTTATTTTTATATTATTTTGTTTTGTAAATATTTTTTAAATATCATTCGGACACTGAAAATAATTAATTTCGTTGGAACTCAGATTAATTTTGGACTCAGACTTAAATAGCCCAGTCTATTAAAAATAATTGCTTGCTAAAAGTA-------------------------------------------AAA--TATTTTATATATTCTATG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCT-TTTAACATTTTGTCATTTT-------------------CCCAA--CCAGGTCCCGATGGCAGCAATCTGTTTATTTACCACCTACCTCAGGAGTTCATT
droFic1 scf7180000454015:171019-171289 + TAAAAAA--------------------------------------------------------------------------ATGAATTTTTTATGGCA--------------------------------------------------------------TTTCTTAAAGAAATT----------------------------------------------------------------AAATTTA--------------------------------------------TAAAATAATTTATATAAAGGTTGTATTATGCTGCTAGTAAATAAGCAATTTA-----------------------------------------------------------------------------------------------------------TATTGTAATTTGT----------TATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCT-TTCCAAGTTTTTTAA---------------------------------------------AATGTATTTAAAAAATG-----------TTTTGT---TGGATAATGTCTTAAATGTTTTATGGTA--------------------------------------------CTAAT------ATTTCTTTT--------------------------------------------------------------------------------GTT-CTCATTTAT-------------------ATTTT--TCAGGACCCGAGGGCTGCAACCTGTTCATCTACCATCTGCCGCAGGAGTTCACC
droKik1 scf7180000301476:397586-397723 + CTTA-------------------------------------------------------AGT---------------------------------------------------------------TAT----TTT-------TAACTTAA-------------------------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTTTAAAATTATTTAGTAATA-----------------------------------------TATTTAAT--------------------------------------------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------TTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTAATAATTTCCTTTCCT-------------------TCTTT--TCAGGACCCGAGGGCTGCAACTTATTCATTTACCATCTGCCGCAGGAGTTCACC
droAna3 scaffold_12916:13086855-13086980 - AAATCATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAT---TATTTTT------------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTTAAATTATAATACATATA--------------------------------------------------------------------------------------------------------------------------TTC--------------------------------------------AACT-TTA------CCTTTT-------------------------------------------------------------------------------------TTAAACAT-------------------TTATT--CCAGGACCCGAAGGCTGCAACCTATTCATTTACCATCTGCCGCAGGAGTTTACA
droBip1 scf7180000396580:516430-516660 + CAGCGCCATACAAGCAGCAGCTGCGGGAGTGGCTGGTAAGCAGATCGAGGGTAAATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACAAAAATATTTAAAATAAAATTACATGCGCATTCCATGCATGTAATATATACAT----------------------------------------------------------------ACATGGTTTTGAAAATGACTT-------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAAGC--------------------------CTCT----------------------------------------------------------------------------------------------------------------------CAA---CTAACGATTTCTTAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTC-------------------CCTCT--TCAGGACCCGACGGCAGCAATCTATTCATTTATCACTTACCTCAGGAGTTCATA
dp5 4_group3:5698309-5698384 - CAGTGCCCTACAAGCAGCTGCCGCAGGCGTGGCTGGCAAACAGATCGAGGGTGAGTCCAATAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAAAAACCATT
droPer2 scaffold_1:7189720-7189785 - GAACTCTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGC--TCAGGTCCCGATGGCAGCAATCTGTTCATTTATCATCTACCTCAGGAGTTCATC
droWil2 scf2_1100000004521:10132830-10133090 + CAGCGCCCTTCAAGCAGCTGCAGCGGGCGTGGCGGGCAAACAGATCGAGGGTGAGTAAAACAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTGTT----------------------------------------------------------------------------GCCT---ACTTTTT------------GGCAT-------------------------------------------------------------------------------------------------------------------------------------------------------TTGAAAAGTTTTTGTATCGGTATATTTAAATGCCCTTTTAAAG--CATTAATTAACGCTTTTAATA----------------------------------------------------------------------------------------------------------CCATAATT--------------------------------------------------------------------------------------------------------------------------GATGCACAATT--TATAATTATTTTCATTAAATATT-CTCCATTTT-------------------GCATT--TCAGGGCCCGATGGCAGTAATCTGTTCATATATCATCTACCTCAGGAATTCATT
droVir3 scaffold_12963:17513024-17513107 + TAATAATATT--------------------------------------------------------------------------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAA---TACTCTC-------------------TACAATCATAGGTCCCGATGGCAGCAATCTGTTTATCTATCATCTACCTCAGGAATTCATA
droMoj3 scaffold_6500:17092474-17092690 - TTAAAATT--------------------------------------------------------CAATTTAAAATAACAT---TAA-------------CGATTACTTAAATTTTA-TAAAAATTTAA----ATCTAGATAA--------CGAC------------------AATTAATTTTTTATAAAATAATATATTTAGCTA-----------------------------------------------------------------TATATAATTAACTAAAATTAAAAAA---------------------------------------------------------------TGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATT--------------------------AAAATAA-----------TATTAT---AAGAATATATATTAAAATAATTAAATTC--------------------------------------------AATT-------AAATTTTAA---------------------------------------------------------ATACATATGTATT----------------------------------------------------------------------------------------ATATAGAAAGTAAAT
droGri2 scaffold_15252:14945036-14945369 + CAGCGCCTTGCAGGCGGCAGCAGCGGGCGTGGCAGGCAAACAGATCGAGGGTAAGTCTCC---------------------------------TAATATTTCCTAGTCAAGTTGTC-TGATGAGTTAG----AGT-------TAATTCAA-------------------------GAATCTTTCGCAATATTATTTTCTTATTTCCCTACACGTACCAAATCAGTGACTACATATATAAA-ATGTTG---------AGCTAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATTGAGAAAAATATTTGAAACTAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACAATTGCATAA--------------------------------------------CT---TTAGGCGACTGTTT----------------------------------------------------------------------------AAAAT-AATCTCTCTTTCTCTGTCTCTATCTTTTGATCATTT--TCAGGTCCGGATGGCAGCAATCTGTTTATCTATCATCTACCTCAGGAATTCACA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CAGCGCCCTTCAAGCGGCAGCTGCCGGCGTGGTTGGCAAGCAGATCGAGGGTAAGCTTAAATTACAATTTAAAAA-----AATTAATTTTTACTG-CA------------AATATA-TA-------------------------------A-AAAAGCGACTTCTTTACAACGAA---------------------------------------------------------------AAAATGTA---TA-----------------------------------------TAAGAGCACTTA---------------------------------ATTTATAAAGGTATCTAGAAGTAC-----GCC--A----------------C---ATTATCGTC-TC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCAAGATTTTTAATGGATTT------------------------------------------------------------------TTTTGTGCAATAACGATACCTTAAATTAATTAAATAA--------------------------------------------CTTT-------TAACTTTGA---------------------------------------------------------ATCTATATTTATTAATACTAAATAAATATGACTTTC-------------------TCCAA--CCAGGTCCCGATGGCAGCAATCTTTTCATTTATCACCTACCTCAGGAGTTCATTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........AAGCGGCAGCTGCCGGCGTGGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................C-TC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCAAGATTTTTAATG.........................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
..GCGCCCTTCAAGCGGCAGCTGCCGGCGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100010000000000000
..................................GGCAAGCAGATCGAGGGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000100000
droSec2
CAGCGCCCTTCAAGCGGCAGCTGCCGGCGTGGTTGGCAAGCAGATCGAGGGTAAGCTTAAGTTACAATTTAAAA------AAT---TTTTTACTT-CA------------AATATC-TAAA-----------------------------A-ACAAGCAACCTCTTTAAAACGAA---------------------------------------------------------------AAAATGTA---TA-----------------------------------------TAAGAGCACTTA---------------------------------CTTTAAAAATGTATCTAGAAGTAC-----GCC--A----------------C---ATTATCGTC-TC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCAAGATTTTTAATGGATTCATCCATGTTATTATCATACATC----------------------------------------AAACTTTTGTGCAAAAACGATACCTTAAATCAATTAAATAA--------------------------------------------CTTT-------TAACTTTGA---------------------------------------------------------ATTTATATTTGTTAATACTAAATAAATATGACTTTC-------------------TCCAA--CCAGGTCCCGATGGCAGCAATCTTTTCATTTATCACCTACCTCAGGAGTTCATTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................TGCCGGCGTGGTTGGCAAGCAGATCGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100
...CGCCCTTCAAGCGGCAGCTGCCGGCGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010010
................GCAGCTGCCGGCGTGGTTGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
...................GCTGCCGGCGTGGTTGGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
................GCAGCTGCCGGCGTGGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
dm3
CAGCGCCCTTCAAGCGGCAGCTGCCGGCGTGACTGGCAAGCAGATCGAGGGTAAGCTTCAATTACAAAATAA---A---AATTCAATTTGTACTG-CA------------AATACTTTAAA-----------------------------A-AAAAACGACCTCTTAACAACAAA---------------------------------------------------------------AAAAAATA---TA---------------------------------------TAAACGAGCACTTA---------------------------------CTTTATAAAGGAATCTAGAAGTAC-----GCC--A----------------G---ATTACCTTC-TC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCAAAATTTTTAATGGATTCATCCATGCTATTATCATACATC----------------------------------------TAACTTTTGTGCAAT------A----------------------------------------------------------------------------CCTTTGA---------------------------------------------------------ATCTATATGTATTAATACTAAATACTTATGACTTTC-------------------TCCGA--CCAGGTCCCGATGGCAGCAATCTTTTCATTTATCACCTACCTCAGGAGTTCATTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................ACTGGCAAGCAGATCGAGGGTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22116.001600000000000000000000000000000000000000000000000000000000011140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TTCAAGCGGCAGCTGCCGGCGTGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCATTTATCACCTACCTCAGGAGT.....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................ACTGGCAAGCAGATCGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GACTGGCAAGCAGATCGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......CCTTCAAGCGGCAGCTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTATCACCTACCTCAGGAGTTCATT2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GCGCCCTTCAAGCGGCAGCTGCCGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CTGGCAAGCAGATCGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGCAAT------A----------------------------------------------------------------------------CCTTTGA---------------------------------------------------------ATCTATATGT..........................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCGATGGCAGCAATCTTTTCATT........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCATTTATCACCTACCTCAGGAGTT....2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TGACTGGCAAGCAGATCGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...............................ACTGGCAAGCAGATCGAGGGTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CAGCGCCCTTCAAGCGGCAGCTGCCGGCGTGACTGGCAAGCAGATCGAGGGTAAGGTTCAATTACGGAGAAC---A---CTTTTGATTGGTACTG-CA------------AATATC-TG-------------------------------C-ACAGGGCACCTTTTTCCAACGAG---------------------------------------------------------------AA-ATGTAG---------GGCCACAAAAATGATATGCTCTTACAAATATTTATAAAGCAGCAC-----------------------------------------------------------------T--GCA--------------------------GTT-TA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTT---ATGTTCAACGGATTTATCCGTGTTTGCATATTACATTTTTAATCCTTTTTTAAAA-----------TTAGCATCATTAAATTTCTGTG-----AAGATAGCTGTTATCAATTAAAGAAATCTTCTT-AACCTAAAACATAGCATGAATG-----------TC-------------------------------------------------------------------------------------CTATTGATACTAAATAAATCTTACTTTC-------------------TCCGA--CCAGGTCCCGATGGCAGCAATCTTTTCATTTATCACCTACCTCAGGAGTTCATTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTCATTTATCACCTACCTCA..........2311.0011000000
............................GTGACTGGCAAGCAGATCGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTATCACCTACCTCAGGAGTT....2311.0010000100
..........................GCGTGACTGGCAAGCAGATCGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
...CGCCCTTCAAGCGGCAGCTGCCGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTACTTTC-------------------TCCGA--CCAG..................................................1911.0010001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCATTTATCACCTACCTCAGGA.......2411.0010100000
droYak3
CAGCGCCATTCAAGCGGCAGCTGCCGGCGTGGCTGGCAAGCAGATCGAGGGTAAGCTTCAATTAGAAGGGAA---A---CAATTAATTTGTAAGG--------------------------------------------------------------ATAACTCTTTTTAAGAAG----------------------------------------------------------------AAATTTA--------------------------------------------TAAGACAGCACTTA---------------------------------C----------------------------GCA--G---------------------------GG-CC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATT-------------------------CCA-------------------------------------------AAAT--A----------------GTTCACGATGTTCAATGAACTTATCCATGTTTTTATCTTTCATTT-GAATCATTT----------------------------TAAATTTGTGTGCAGTGTAGATACCTAT-----------------TTCTT-ACCTTGAAAAATATTATGAATGTTTAGAAAATTTC-------------------------------------------------------------------------------------CGATTAATACTACATAAATGTCACTTTC-------------------TCCAA--CCAGGTCCCGATGGCAGCAATCTTTTCATTTATCACCTACCTCAGGAGTTCATTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................GGCGTGGCTGGCAAGCAGATCGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00201000010000
....................CTGCCGGCGTGGCTGGCAAGCAGATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
.....................................................................................................................................................................................................................................................................................................GACAGCACTTA---------------------------------C----------------------------GCA--G---------------------------GG-C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGCAATCTTTTCATTTAT.....................2111.00101000000000
.........................GGCGTGGCTGGCAAGCAGATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
............AGCGGCAGCTGCCGGCGTGGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
....GCCATTCAAGCGGCAGCTGCCGGCGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTACCTCAGGAGTTCATT1911.00101000000000
...........AAGCGGCAGCTGCCGGCGTGGCTGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
............................................................................................AGG--------------------------------------------------------------ATAACTCTTTTTAAGAAG----------------------------------------------------------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
......CATTCAAGCGGCAGCTGCCGGCGTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
.......ATTCAAGCGGCAGCTGCCGGCGTGGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
droEug1
TTTA-------------------------------------------------------AGTTAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATATT--------------------------------------------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------TCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAACAATA-------------------------------------------------------------------------------------------------------------ATTATCTCCTATTATTTATTTCCTCC-------------------CAAAA--CCAGGTCCCGATGGCAGCAATCTATTCATTTATCATCTACCTCAGGAGTTCATTSizeHit CountTotal NormTotal
No Reads
droBia1
CAGCGCCCTTCAAGCGGCCGCTGCGGGCGTGGCTGGCAAACAGATTGAGGGTAAGAA------------------AGCGT---TCT-------------TTGATATATATTTATTC-CCAAAATAAAT----GTTTA--------------------------------AACGAG------------AAACGAAATATTATATTA-----------------------------------------------------------------AACGCAAATTAATAAAATTCAAAAG---------------------------------------------------------------TAC-----ACATCAGTTGGTACTTTAATGACATTATTTTCGACTTCATACATTATATTTAATGTCTGTTTTTTTTTAAAGCTTTACATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTCCTTAT----------------------------------------------------------------------------------------------------------ATCTAATAATAAATAAAATAATAATCAAAAACCTAAAACATATTCCGTT---------------TACT-TTG------TGTTTCTATAACACTTGTTTACAAGAATACATTTGTTTCCTAGCTCCGCTATAAAATCGCAA-T--TATAAATATTTAAAATAAATATTTTATCCTTTT-------------------TCCAA--TTAGGTCCGGATGGCAGCAATCTGTTCATTTATCACCTACCTCAGGAGTTCATTSizeHit CountTotal NormTotal
No Reads
droTak1
CAGCGCCCTTCAGGCGGCTGCCGCGGGAGTGGCTGGCAAACAGATTGAGGGTAAGCTTAAAATAAA--TTAAAAA-----AAT------------------------------------------TAA----ATT-------AAATTAAA-------------------------G----------------------------------------------------------------------------------------------------------------------AAAATAATTA---------------------------------T----------------------------GAA--A-----------------------------------------------------------------GTATTAAAAATATATAGAAAATCAA----------TACACGTTCACTTACCTTTCATTTACAATG---AAAATTTACTAAAAAATAAATTATAAAATCCAATGTAAAAAAAAAAAATTTTAGTTTCTTATAACTTTTTG------------GTGTTGTTCTTTCATTATTATTCTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCTCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACCACTAAAAATTTCTTCTTCTT-------------------CACAA--TCAGGCCCCGATGGCAGCAATCTGTTCATTTATCACCTACCTCAGGAGTTCATTSizeHit CountTotal NormTotal
No Reads
droEle1
AACTTAA-----ATAGGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGTT-------------------------GAA-------------------------------------------AAATTTAATTTATATTTCTTATG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCTACTAAACATTATTTCGTCTT-------------------CCCAA--CCAGGTCCCGATGGCAGCAATTTATTCATTTACCACTTACCTCAGGAGTTCATTSizeHit CountTotal NormTotal
No Reads
droRho1
CAGCGCCCTTCAAGCGGCAGCTGCGGGCGTGGCTGGCAAACAGATAGAGGGTAAGCTTAAGTTAAATG---------------------------------------------------ATGATATTGCTTCATAATAATAG--------CTAC-AGGTATTTTTATTTAA-AAT----------------AA------------------------------------------------ATAAAGGAAAAAACAGGTCTTTAAGATG-TATCTAACTAAAAAAAATTAAAAAG---------------------------------------------------------------TTTAATCCT--ATA--------------------------ATT-AA--------------------------------------------------------------------------A---------------------------------------------------------------------------------------------TTTG------------GTGCCGAACATTTATTTTTATATTATTTTGTTTTGTAAATATTTTTTAAATATCATTCGGACACTGAAAATAATTAATTTCGTTGGAACTCAGATTAATTTTGGACTCAGACTTAAATAGCCCAGTCTATTAAAAATAATTGCTTGCTAAAAGTA-------------------------------------------AAA--TATTTTATATATTCTATG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCT-TTTAACATTTTGTCATTTT-------------------CCCAA--CCAGGTCCCGATGGCAGCAATCTGTTTATTTACCACCTACCTCAGGAGTTCATTSizeHit CountTotal NormTotal
No Reads
droFic1
TAAAAAA--------------------------------------------------------------------------ATGAATTTTTTATGGCA--------------------------------------------------------------TTTCTTAAAGAAATT----------------------------------------------------------------AAATTTA--------------------------------------------TAAAATAATTTATATAAAGGTTGTATTATGCTGCTAGTAAATAAGCAATTTA-----------------------------------------------------------------------------------------------------------TATTGTAATTTGT----------TATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCT-TTCCAAGTTTTTTAA---------------------------------------------AATGTATTTAAAAAATG-----------TTTTGT---TGGATAATGTCTTAAATGTTTTATGGTA--------------------------------------------CTAAT------ATTTCTTTT--------------------------------------------------------------------------------GTT-CTCATTTAT-------------------ATTTT--TCAGGACCCGAGGGCTGCAACCTGTTCATCTACCATCTGCCGCAGGAGTTCACCSizeHit CountTotal NormTotal
No Reads
droKik1
CTTA-------------------------------------------------------AGT---------------------------------------------------------------TAT----TTT-------TAACTTAA-------------------------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTTTAAAATTATTTAGTAATA-----------------------------------------TATTTAAT--------------------------------------------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------TTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTAATAATTTCCTTTCCT-------------------TCTTT--TCAGGACCCGAGGGCTGCAACTTATTCATTTACCATCTGCCGCAGGAGTTCACCSizeHit CountTotal NormTotal
No Reads
droAna3
AAATCATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAT---TATTTTT------------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTTAAATTATAATACATATA--------------------------------------------------------------------------------------------------------------------------TTC--------------------------------------------AACT-TTA------CCTTTT-------------------------------------------------------------------------------------TTAAACAT-------------------TTATT--CCAGGACCCGAAGGCTGCAACCTATTCATTTACCATCTGCCGCAGGAGTTTACASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACCCGAAGGCTGCAAC.................................1812.002000002
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTACCATCTGCCGCAG.........1911.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACCCGAAGGCTGCAACCTA..............................2211.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTACCATCTGCCGCAGGAGTT....2211.001000010
droBip1
CAGCGCCATACAAGCAGCAGCTGCGGGAGTGGCTGGTAAGCAGATCGAGGGTAAATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACAAAAATATTTAAAATAAAATTACATGCGCATTCCATGCATGTAATATATACAT----------------------------------------------------------------ACATGGTTTTGAAAATGACTT-------------------------------------------------------------------------------------------------------------------------------------------------------TTGATAAGC--------------------------CTCT----------------------------------------------------------------------------------------------------------------------CAA---CTAACGATTTCTTAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTC-------------------CCTCT--TCAGGACCCGACGGCAGCAATCTATTCATTTATCACTTACCTCAGGAGTTCATASizeHit CountTotal NormTotal
No Reads
dp5
CAGTGCCCTACAAGCAGCTGCCGCAGGCGTGGCTGGCAAACAGATCGAGGGTGAGTCCAATAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAAAAACCATTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................CTGGCAAACAGATCGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
..GTGCCCTACAAGCAGCTGCCGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.........ACAAGCAGCTGCCGCAGGCGTGGCTGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010010000000
.......................CAGGCGTGGCTGGCAAACAGATCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
..........CAAGCAGCTGCCGCAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
droPer2
GAACTCTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGC--TCAGGTCCCGATGGCAGCAATCTGTTCATTTATCATCTACCTCAGGAGTTCATCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
CAGCGCCCTTCAAGCAGCTGCAGCGGGCGTGGCGGGCAAACAGATCGAGGGTGAGTAAAACAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTGTT----------------------------------------------------------------------------GCCT---ACTTTTT------------GGCAT-------------------------------------------------------------------------------------------------------------------------------------------------------TTGAAAAGTTTTTGTATCGGTATATTTAAATGCCCTTTTAAAG--CATTAATTAACGCTTTTAATA----------------------------------------------------------------------------------------------------------CCATAATT--------------------------------------------------------------------------------------------------------------------------GATGCACAATT--TATAATTATTTTCATTAAATATT-CTCCATTTT-------------------GCATT--TCAGGGCCCGATGGCAGTAATCTGTTCATATATCATCTACCTCAGGAATTCATTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................GGGCAAACAGATCGAGGGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.............GCAGCTGCAGCGGGCGTGGCGGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
.................................GGGCAAACAGATCGAGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTTCATATATCATCTACCTCAGGA.......2711.00110000
.............GCAGCTGCAGCGGGCGTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
............AGCAGCTGCAGCGGGCGTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCATTTT-------------------GCATT--TCAG..................................................1811.00100010
droVir3
TAATAATATT--------------------------------------------------------------------------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAA---TACTCTC-------------------TACAATCATAGGTCCCGATGGCAGCAATCTGTTTATCTATCATCTACCTCAGGAATTCATASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTTATCTATCATCTACCTCAGGA.......2611.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
TTAAAATT--------------------------------------------------------CAATTTAAAATAACAT---TAA-------------CGATTACTTAAATTTTA-TAAAAATTTAA----ATCTAGATAA--------CGAC------------------AATTAATTTTTTATAAAATAATATATTTAGCTA-----------------------------------------------------------------TATATAATTAACTAAAATTAAAAAA---------------------------------------------------------------TGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATT--------------------------AAAATAA-----------TATTAT---AAGAATATATATTAAAATAATTAAATTC--------------------------------------------AATT-------AAATTTTAA---------------------------------------------------------ATACATATGTATT----------------------------------------------------------------------------------------ATATAGAAAGTAAATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
CAGCGCCTTGCAGGCGGCAGCAGCGGGCGTGGCAGGCAAACAGATCGAGGGTAAGTCTCC---------------------------------TAATATTTCCTAGTCAAGTTGTC-TGATGAGTTAG----AGT-------TAATTCAA-------------------------GAATCTTTCGCAATATTATTTTCTTATTTCCCTACACGTACCAAATCAGTGACTACATATATAAA-ATGTTG---------AGCTAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATTGAGAAAAATATTTGAAACTAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACAATTGCATAA--------------------------------------------CT---TTAGGCGACTGTTT----------------------------------------------------------------------------AAAAT-AATCTCTCTTTCTCTGTCTCTATCTTTTGATCATTT--TCAGGTCCGGATGGCAGCAATCTGTTTATCTATCATCTACCTCAGGAATTCACASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 05:22 PM