ID:

dsi_22164

 Coordinate:

3l:9650941-9651090 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-24.9 -24.9 -24.7

Flybase annnotation

five_prime_UTR [3l_9650810_9651175_-]; exon [3l_9650683_9651175_-]

No Repeatable elements found

Sense Strand Reads

##########################################################################################################################################################################################################################################################
CAGCATCGAATTGATTAATTGCGGCGCATGCCGAAAAGGGAAAAAAGGGAGGATGTGTTTCAATCAACGCGAGTGAAAACCGCGACGAACGAAGAAAAAAAAAACCAAAACTACTGCGGCAATCGTGAACAAAGAACTCGTTGCGTCCGAAATTATGTGGCACAGCAACTAAACTATTGGATTTCCCAATCATTTTCCAGTTGAAATCAACGCGTTGCAGCAGCCCCCGCAGCAACAGCAACAACAAAAC
**************************************************(((.(((((((..((..((((.((....))))))..))..)))).....................(((.....))).............((((((((((........))).)).)))))......(((((.....))))))))..)))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 M023
head
 O002
Head
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
........................................................................................................................AATCGTGAACAAAGAACTCGTTGC.......................................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0
..........................................................................................................................TCGTTAACAAAGAACTCGTTGCG......................................................................................................... 23 1 1 1.00 1 0 0 0 0 1 0 0 0 0
.....................................GGGAAAAAAGGGAGGATG................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0
...................................AAGGGAAAAAGGGGAGGATGTG................................................................................................................................................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0
...............TAATTGCGGCGCATGCCGAAAAGGG.................................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0
......................GGCGCATGCCGAAAAGGGA................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0
.................................................................................GCGACGGACGAAGATAAAAAA.................................................................................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0
...............................................................................................................TACTGCGGCAATCGTGAACAAAGAAC................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......CGAATTGATTAATTGCGGC................................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0
...........................................................................AAAACCTCGACTTACGAAGA........................................................................................................................................................... 20 3 8 0.25 2 0 0 0 0 0 0 0 2 0
..................................AAAGGGAAAAAAAGGAGGA..................................................................................................................................................................................................... 19 1 5 0.20 1 0 0 1 0 0 0 0 0 0
......CGCATTGATTAATTGTGG.................................................................................................................................................................................................................................. 18 2 7 0.14 1 0 0 0 0 0 0 0 0 1
....................................CTGGAAAAAAGGGAGGATG................................................................................................................................................................................................... 19 2 7 0.14 1 0 1 0 0 0 0 0 0 0
.........................................AAAAAGGGAGGATTTGGT............................................................................................................................................................................................... 18 2 14 0.07 1 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................TTTCCACATCAGTTTCCAGTT................................................ 21 3 16 0.06 1 0 0 0 1 0 0 0 0 0
...........................................................................................AAGAAAAAAAAATCCAAAA............................................................................................................................................ 19 1 18 0.06 1 0 1 0 0 0 0 0 0 0
........................................AAAAAAGGGAGGATT................................................................................................................................................................................................... 15 1 20 0.05 1 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

GTCGTAGCTTAACTAATTAACGCCGCGTACGGCTTTTCCCTTTTTTCCCTCCTACACAAAGTTAGTTGCGCTCACTTTTGGCGCTGCTTGCTTCTTTTTTTTTTGGTTTTGATGACGCCGTTAGCACTTGTTTCTTGAGCAACGCAGGCTTTAATACACCGTGTCGTTGATTTGATAACCTAAAGGGTTAGTAAAAGGTCAACTTTAGTTGCGCAACGTCGTCGGGGGCGTCGTTGTCGTTGTTGTTTTG
**************************************************(((.(((((((..((..((((.((....))))))..))..)))).....................(((.....))).............((((((((((........))).)).)))))......(((((.....))))))))..)))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 O002
Head
 SRR902008
ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 SRR553488
RT_0-2 hours eggs
 M053
female body
 O001
Testis
 SRR618934
dsim w501 ovaries
..............................................................................TGGAGCTGCTGGCTTTTTTTTTTTT................................................................................................................................................... 25 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................CCGTGTCGTTGGTTTGGTAAC....................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................AACCTAAAGGGTTAGTAAAAG..................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................TCCGACTCAGAGTTAGTTGCGCT.................................................................................................................................................................................. 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................GATTTGATAACCTGA................................................................... 15 1 9 0.22 2 0 0 0 1 1 0 0 0 0 0
.........................................................................................................................................................................................................TCTTTAGTTGCGCAAGATCG............................. 20 3 6 0.17 1 0 0 0 0 0 1 0 0 0 0
........................................................................................................................................................................................................AACTTTAGTGGCGCAA.................................. 16 1 6 0.17 1 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................................CTTTAGTGGCGCAAGATCGT............................ 20 3 7 0.14 1 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................GGAAAGCAGGCTTTAATA.............................................................................................. 18 2 8 0.13 1 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................CTTTAGTGGCGCAAGATCG............................. 19 3 17 0.12 2 0 0 0 0 0 0 0 1 1 0
.............................................................................................................................................................................................AGAAAAAGGTCCACTTTCGT......................................... 20 3 17 0.06 1 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................GGACATCTTTAGTTGCG..................................... 17 2 18 0.06 1 0 0 0 0 0 0 1 0 0 0
................................................................................ACGCAGCTTGCTTCTTT......................................................................................................................................................... 17 2 19 0.05 1 0 0 0 0 0 0 1 0 0 0
.........................................................................................................................................................................................GGTTAGGAAAAGGTC.................................................. 15 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0
.................................................................TTGCGCCCACGTATGGCG....................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:9650891-9651140 - dsi_22164 CAG------C-ATCGAATTGATTAATTGCGGCGCATGCCGAAAAGGGAAAAAAGGGAGGATGT---GTTT-CAAT--------CAACGCGAGTGA-----------------------AAACCGCGACGA-------------------------------------ACGAAGAAAAAAA----------------AAAC--CAAA----ACTACTGC---GGCAATCGT---GAACAAAGAACTC-GT-------------TGCG----------------------------------------------------T-------------------------------------CCGAAATTATGTGG---------CACAGCAACTAAAC-TATT--GGA---T-TTCC-CA------ATC----ATTTTCCAGTTGAAAT-CAACGCGTTGCA--------------------------------------GCAGCCCCCG------CAGCAACAGCA---AC-------------------AACAA----AAC
droSec2 scaffold_0:2123683-2123930 - CAG------C-ATCGAATTGATTAATTGCGGCGCATGCCGAAAAGGGAAAAAAGGGAGGATGT---GTTT-CAAT--------CAACGCGAGTGA-----------------------AAACCGCGACGA-------------------------------------ACGAAGA--AAAA----------------AAAC--CAAA----ACTACTGC---GGCAATCGT---GAACAAAGAACTC-GT-------------TGCG----------------------------------------------------T-------------------------------------CCGAAATTATGTGG---------CACAGCAACTAAAC-TATT--GGA---T-TTCC-CA------ATC----ATTTTCCAGTTGAAAT-CAACGCGTTGCA--------------------------------------GCAGGCCCCG------CAGCAACAGCA---AC-------------------AACAA----AAC
dm3 chr3L:9891253-9891501 - CAT------C-ATCGAATTGATTAATTGCGGCGCATGCCGAAAAGTGAAAAAAGGGAGGATGT---GTTT-CAAT--------CAACGCGAGTGA-----------------------AAACCGCGACGA-------------------------------------ACGAAGAAAAAAA----------------AAAC--CAAACT-----ACTGC---GGCAATCGT---GAACAAAGAGCTC-GT-------------TGCG----------------------------------------------------T-------------------------------------CCGAAATTATGTGG---------CACAGCAACTAAAC-TATT--GGA---T-TTCC-CA------CTC----ATTTTCCAGTTGAAAT-CAACGCGTTGCA--------------------------------------GCAGCCCCCG------CAGCAACAGCA---AC-------------------AACAA----AAC
droEre2 scaffold_4784:9882816-9883050 - CAG------C-ATTGAATTGATTAATTGCGGCGCATGCCGAAAAGGGAAAAAAGGGAGGAAGT---GTTT-CAAT--------AAG--CGAGTGA-----------------------AAACCGCGACGA-----------------------------------------AGGAAAAAA----------------AAAC--CAACT------GCTGC---GGCAATTGT---GAACAAAGAACTC-GT-------------TGCG----------------------------------------------------T-------------------------------------CCGAAATTATGTGG---------CATAGTAACTAAGC-TATT--GGA---T-TTTC-CA------CTC----ATTTTCCAGTTGAAAT-CAACGCGCT-CA--------------------------------------GCAGCCCCCG------CAGCA---------AC-------------------AACAA----AAC
droYak3 3L:9867532-9867772 - CAG------C-ATAGAATTGATTAATTGCGGCGCATGCCGAAAAGGGAAAAAAGGGAGGATGT---GTTT-CAAT--------AAACGCGAGTGA-----------------------AAACCGCGACTAAGGAA----------------------------------------AAAAA----------------AAAC--CAA----C-----TGC---TT-AATCGT---GAACAAAGAACTC-GT-------------TGCG----------------------------------------------------T-------------------------------------CCGAAATTATGTGG---------CACAACAACTAAAC-TATT--GGA---T-TTCC-CA------CTC----ATTTTCCAGTTGAAAT-CAACGCGTTGCA--------------------------------------GCAGCCCCCG------CAGCAACAGCA---AC-------------------AACAA----AAC
droEug1 scf7180000409711:1749413-1749637 - CGG------C-ATAAAATTGATTAATTGCGGCGCATGCCGAAAAGGGAAAAAAGGGAGGATGT---GTTT-CAAT--------AAACGAGAGTGA-----------------------AAACCGCGACGA-----------------------------------------------------------------------ACAAGTGAC-----TGCGGCGACAATCGG---GAACAAAGAACTG------------------------------------------------------------------------A-------------------------------------TCAAAAATATGTGC---------CACAGCAATTAAAATTTTT--GGT---T-TTCC-AC------CAC----ATTTTCCAGTTGAAGATTATAGCGTTGCA--------------------------------------GCC------G------CAGCAACAGCA---AC------------C------AAC------AAC
droBia1 scf7180000302428:7872496-7872707 + CGG------T-AGGAAATTGATTAATTGCGGCGCATGCCGAAAAGGGAAAAAAGGGAGGATGT---GTTT-CAACA-------AAACGACGGGGA-----------------------AAACCGCGACGA-----------------------------------------------------------------------ACAAGTGAC--------------AAGCG-GCGGAACAAAGAACTGC-GTGT-----GCAAATG-G-----------------------------------------------------------------TT----------------------GTGGAAAATGCGTGG---------CTCGATGTTTAATC-T-TT--GGA---T-TTCC-TC------CCC----AATTTCCAGTTGAAAA-CTACGTGTTGCA--------------------------------------AC----------------------------------------------------------AAC
droTak1 scf7180000415269:134107-134353 + CGG------T-CGGGAATTGATTAATTGCGGCGCATGCCGAAAAGGGAAAAAAGGGAGGATGT---GTTT-CAACA-------AAACGACAGTGA-----------------------AAACCGCGACGA-----------------------------------------------------------------------ACAAGTGACTCTTCTGC---GACAGTTTTGCGGAACAAAGAACTC-GG-GTGGAAAAT---AGCG-----------------------------------------------------------------AA----------------------GTGGAGAATATCTAG---------CACAATGTTTAAAC-T-TT--GGA---T-TTCC-TG------CTC----ATTTTCCAGTTGAAGA-ATACGTGTTGCA--------------------------------------ACA------------------ACAAAGGCAGC------------CCCCTC-GAG------AAG
droEle1 scf7180000490564:694579-694808 - TGG------G-CGAAAATTGATTAATTGCGGCGCATGCCGAGAAGGGAAAAAAGGGAGGATGT---GTTTTCAAT--------AAACGAGAGTGA-----------------------AAACCGCGACGA-----------------------------------------------------------------------ACAAGTGAC-----TGC---AGAAATCAA---GAACAAAGAACTC-GA-------------TG----------------------------------------------------------------------------------------------GGAAATATGTGG---------CACAACGCCTAAAT-T-TT--GGC---TTTTCC-TC------CTC----ATTTTCCAGTTGAAAA-GTACGCGTTGCA--------------------------------------GCAGCAGCAG------CAGCAACAACAGCAAC-------------------AAC------AAC
droRho1 scf7180000776514:94711-94939 - TGG------G-CAAGAATTGATTAATTGCGGCGCATGCCGAAAAGGGAAAAAAGGGAGGATGT---GTTTTCAAT--------AAACGAGAGTGA-----------------------AAACCGCGACGA-----------------------------------------------------------------------ACAAGTGAC-----TGC---AGAAATCGG---GAACAAAGAACTT-GT--------------GCT----------------------------------------------------T-------------------------------------C----AATATGTGG---------CACAACGCCTAAAT-T-TT--GGA---TTTTCC-TC------CTC----ATTTTGCAGTTGAAAA-GTACGCGTTGCA--------------------------------------GCAACAAC---------------AAAAGCAGC------------CAGCGGCAGCC-----AAA
droFic1 scf7180000453807:1053480-1053707 - TGG------T-CGAGAATTGATTAATTGCGGCGCATGCCGAAAAGGGAAAAAAGGGAGGATGT---GTTT-CAAT--------AAACGAGAGTGA-----------------------AAACCGCGACGA-----------------------------------------------------------------------ACAAGTGAC-----TGC---TGCATTCGG---GAACAAAGAACTT-AC-------------TA---------------------------------------------------------------------------------------------GGAAAATATGTGG---------CACAACGCCTAAAA-C-TC--GAA---ACTTCCTTC------CTT----GTTTTGCAGTTGGAAC-GATTGCGTTGCA--------------------------------------GCAGCAGCAG------CAGCA---------AC-------------------AACAAAAAACAC
droKik1 scf7180000302486:2492413-2492640 - CTA------GCAGAGAATTGATTAATTGCGGCGCATGCCGAAAAG---------GGAGGATGC---GTTG-TA-G--------AAACGAGAGTGAAAAGAAAACCGACGAA-CTGCACCAGCAGCGGC------T-----------------C------------------------------------------------GTTCGC-----------------A--CGG---GAACAAAGAACCAA-AAGT-----GCAG-GGCG----------------------------------------------------C-------------------------------------TGAAAAATATGTGC---------AACAGCGCCTAAAT-T-GT--GC----TTT-TC-TA--C---TTCGTAACTCTTGCAGTTGGAAC-CTTCTTGCTGG------------------------------------------------G------CAGCAA--------AC-------------------CAT------AAC
droAna3 scaffold_13337:14820981-14821221 - CAG------C-CAAGAATTGATTAATTGCGGCGCATGCCGAAGAG---------GGAGGATATTACA-TT-CAACAGC------GA--AACAC-AGAAAAAAAGAGACGAAAGTGTGCAGAACGAGGA------A-----------------A------------------------------------------------ACAAGCC----------------------TCGAAACAAAGAACAAA-TAAT-----GCAGATGCG----------------------------------------------------T---------------------------------------GAAAATATGTGC---------CGCACCGTTTAAGC-C-GT--GTT---TTTTTC-TC--CATACTT----GTCTTGCAGTTGAAAC-ATTTGCGTTGCA--------------------------------------GCT------G------CAGCAAAAACA---AC-------------------AAAGC----AAC
droBip1 scf7180000395155:752037-752269 - CAG------C-CGAGAATTGATTAATTGCGGCGCATGCCGAAGAG---------GGAGGATAT---ATT--CAACAGC------GA--AACAC-AGAAAAAAAGAGACAAAAGTGTGTTAAACGAGGA------A-----------------A------------------------------------------------ACAAGCC----------------------TCGAAACAAAGAACAAA-TAAT-----ACAGAAGCG----------------------------------------------------T---------------------------------------GAAAATATGTGC---------CGCACCGTCTAAGC-C-GT--GTC---TTTTCC-A-----TACTT----GTCTTGCAGTTGAAAC-ATTTGCGTTGCA--------------------------------------GCT------G------CAGCAAAAACA---AA-------------------AAC------AAC
dp5 XR_group6:7754521-7754792 + AGG----TGC-CGACAATTGATT-ATTGCGGCGCATGCCGAAGAG---------GGAGGATA------TT-CAACAG------AAACGAGTGTAA-----------------------AAACCGAGGA------A-----------------A--------------ACG---------A----------------AAA--ACAAGTGAC-----TGC------AATC-----AAACAAAGAACAAA-TTGT-----GCAC-----TGCACTTTGGTGCTGTG--------------------------------------------------GTATATTTAT---TGCCTGCCTTTAGAGAATATGTGCGATATGTGATACTTTA-ATAAGC-CG-T--GTA-CT-----C-TT------GTT----TTTTTCCAGTTGTGGC-G-TTGCGTTACA-----G---AAAA----------------------------GAGTCAG------CAACAACAAATACAAC-------------------AGC------GAG
droPer2 scaffold_27:700466-700737 - AGG----TGC-CGACAATTGATT-ATTGCGGCGCATGCCGAAGAG---------GGAGGATA------TT-CAACAG------AAACGAGTGTAA-----------------------AAACCGAGGA------A-----------------A--------------ACG---------A----------------AAA--ACAAGTGAC-----TGC------AATC-----AAACAAAGAACAAA-TTGT-----GCAC-----TGCACTTTGGTGCTGTG--------------------------------------------------GTATATTTAT---TGCCTGCCTTTAGAGAATATGTGCGATATGTGATACTTTA-ATAAGC-CG-T--GTA-CT-----C-TT------GTT----TTTTTCCAGTTGTGAC-G-TTGCGTTACA-----G---AAAA----------------------------GAGTCAG------CAACAACAAATACAAC-------------------AGC------GAG
droWil2 scf2_1100000004511:6425277-6425636 + CAG------C-AGAGAATTGATTGATTGCGGCGCATGCCGAAGAA------GAGGGAGGATAT------T-CAAAAGAAAACGCAAAACGAGTAA-----------------------AAAGT-----------AAAATAAAGTCACACACAAAAAAAAAGCGAGAAGCGAATAGAAGTA----------------AAAT--CAAGT------ATTGC---AGTAATC-----AAACAAAGAAAGAA-TTGT-----GCAC-----CGAGCATATTTCATTTGTTAAACAATT-----TATGCTC-------------TCAATAAAATTGACCGTGTATTTTTCCATTCCTC---------------------------------TCTTTTTC-T-CT--GTT-CT--TTTT-TT------TTT-TTTTTGTTTTAGTTGAGAC-TTTTGCGTTGCGGTGCAGA--AAAGGCAGCGACAACAATAACAACGAGCAGCAGCCGCAG------CAGAAGCAGAA---AC-------------------AACAA----CAA
droVir3 scaffold_13049:9020066-9020345 - CGG------CTATAAAATTGATT-ATTGCGGCGCATGCCGAAAAG---------GGAGGAT--------T-CAACAGC------AA--AGTGTAA-----------------------AAAAAGA------------------------------------------ATGAAAA--AAAAAAACAATGTAGGAA--AAA--ACAAGCC-----TATGC---ACC---------AAACAAAGAAATC-GC--------G-----ATCTACTCTTA------------AGCTACTAAAAATATGCTTATAG-----------------------------------------------------------GG-----------CAGCA-ATAAAC-TG-TGTGCG---T-T-TT-TATTT-T-TTT-TATTACTTGCAGTTGAAGC-ATTTGCGTTGCGGTGTACA--AAAA-------------------------GAAGCAACAG------CAAAA---ACAACAACAACAACAGCAGCG------GGC------GAC
droMoj3 scaffold_6680:6323394-6323655 + CTAAAAAAGCAATAAAATTGATT-ATTGCGGCGCATGCCGAAAAG---------GGAGGAT--------T-CAACAGC------AA--AGAGTGG-----------------------AAAA-GAAAA----------------------------------------------------AAACAATGTAGGAA--AAA--ACATGCGAA-----TGC---ACC---------AAACAAAGAAATC-GC-------------TAGCTATTG-----------TTTAAGCAACTAAAAATATGCTTATAA-----------------------------------------------------------AG---------CATA-CAAAT-AAT-T-TT--GGT---GTTTGT-TT------TTCG-ATTATTTGCAGTTGAAGC-ATTTGCGTTGCAATACACA--AAAA----------------------------GCAGTAG------CAGCGACACCAACAAC-------------------AAC------AAG
droGri2 scaffold_15110:4793943-4794232 - CGG------CCAGAAAATTGATT-ATTGCGGAGCATGCCGAAAAG---------GGAGGAT--------T-TAGCAG--------A--AGAGTGG-----------------------AAACGGAAAACA-------------------------------------GAAAAGAAAAAAAAAACAAAGTAGGAAAAAAATCACAAGCC-----TATGC---ACCAA---C---AAACAAAGAAGTC-GT--------G------CC--------------------------TAAAAATATGCCTATAGTGTATACTAC-------------------------------------TAAAACCTGTGTGT---------GACTTCTTTTTTAC-A--T--GGTTT-TTT-TT-TT--C-TATTCG-TTTATTTGCAGTTGAAGC-ATTTGCGTTGCGGTGTGTAGAAAAC----------------------------GAATAAGAAGAAGCAG---CAGCA---GC-------------------AAC------AAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CAG------C-ATCGAATTGATTAATTGCGGCGCATGCCGAAAAGGGAAAAAAGGGAGGATGT---GTTT-CAAT--------CAACGCGAGTGA-----------------------AAACCGCGACGA-------------------------------------ACGAAGAAAAAAA----------------AAAC--CAAA----ACTACTGC---GGCAATCGT---GAACAAAGAACTC-GT-------------TGCG----------------------------------------------------T-------------------------------------CCGAAATTATGTGG---------CACAGCAACTAAAC-TATT--GGA---T-TTCC-CA------ATC----ATTTTCCAGTTGAAAT-CAACGCGTTGCA--------------------------------------GCAGCCCCCG------CAGCAACAGCA---AC-------------------AACAA----AACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................................................AATCGT---GAACAAAGAACTC-GT-------------TGC.....................................................................................................................................................................................................................................................................................................2412.00200200000000000000
............................................GGGAAAAAAGGGAGGATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
......................TAATTGCGGCGCATGCCGAAAAGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000010000000
.............................GGCGCATGCCGAAAAGGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000001000000000
....................................................................................................................................................................................................................TACTGC---GGCAATCGT---GAACAAAGAAC..........................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
.............CGAATTGATTAATTGCGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000100000000000
...............................................AAAAAAGGGAGGATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.05100000000001000000
droSec2
CAG------C-ATCGAATTGATTAATTGCGGCGCATGCCGAAAAGGGAAAAAAGGGAGGATGT---GTTT-CAAT--------CAACGCGAGTGA-----------------------AAACCGCGACGA-------------------------------------ACGAAGA--AAAA----------------AAAC--CAAA----ACTACTGC---GGCAATCGT---GAACAAAGAACTC-GT-------------TGCG----------------------------------------------------T-------------------------------------CCGAAATTATGTGG---------CACAGCAACTAAAC-TATT--GGA---T-TTCC-CA------ATC----ATTTTCCAGTTGAAAT-CAACGCGTTGCA--------------------------------------GCAGGCCCCG------CAGCAACAGCA---AC-------------------AACAA----AACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................................................................................................................................................................GAACAAAGAACTC-GT-------------TGCG----------------------------------------------------T-------------------------------------..........................................................................................................................................................................................................2011.0010100
dm3
CAT------C-ATCGAATTGATTAATTGCGGCGCATGCCGAAAAGTGAAAAAAGGGAGGATGT---GTTT-CAAT--------CAACGCGAGTGA-----------------------AAACCGCGACGA-------------------------------------ACGAAGAAAAAAA----------------AAAC--CAAACT-----ACTGC---GGCAATCGT---GAACAAAGAGCTC-GT-------------TGCG----------------------------------------------------T-------------------------------------CCGAAATTATGTGG---------CACAGCAACTAAAC-TATT--GGA---T-TTCC-CA------CTC----ATTTTCCAGTTGAAAT-CAACGCGTTGCA--------------------------------------GCAGCCCCCG------CAGCAACAGCA---AC-------------------AACAA----AACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........C-ATCGAATTGATTAATTGCGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2217.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCGTTGCA--------------------------------------GCAGCCCCCG------CAGC...........................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCG------CAGCAACAGCA---AC-------------------AACAA----...2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGAAAT-CAACGCGTTGC......................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................C-GT-------------TGCG----------------------------------------------------T-------------------------------------CCGAAATTATGTG.............................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------------------GCAGCCCCCG------CAGCAACAGCA---AC-------------------AAC.........2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................GAGGATGT---GTTT-CAAT--------CAACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................ATTATGTGG---------CACAGCAACTAA.......................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCGTTGCA--------------------------------------GCAGCCCCCG------...............................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCCCCG------CAGCAACAGCA---A................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................GAAAAAAGGGAGGATGT---G...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000100000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TT--GGA---T-TTCC-CA------CTC----ATTTTC............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................GTGAAAAAAGGGAGGATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................TC-GT-------------TGCG----------------------------------------------------T-------------------------------------CCGAAATTATGTGG---------C..................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-CAACGCGTTGCA--------------------------------------GCAGCCC........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................GCAATCGT---GAACAAAGAGCTC-GT-------------TG......................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.......................................................................................................................................................................................................................................................GT-------------TGCG----------------------------------------------------T-------------------------------------CCGAAATTATGTGG---------...................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................AAACT-----ACTGC---GGCAATCG.........................................................................................................................................................................................................................................................................................................................................1821.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................AGGATGT---GTTT-CAAT--------CAACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................GCAATCGT---GAACAAAGAGC..........................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TATT--GGA---T-TTCC-CA------CTC----ATTTT.............................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................A---T-TTCC-CA------CTC----ATTTTCCAGT........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TC----ATTTTCCAGTTGAAAT-C................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................AGAGCTC-GT-------------TGCG----------------------------------------------------T-------------------------------------CCGAAATTATG...............................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................C---GGCAATCGT---GAACAAAGAGC..........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................AACAAAGAGCTC-GT-------------TGCG----------------------------------------------------T-------------------------------------CC........................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................AAAAAAGGGAGGATGT---GTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
............................................................................................TGA-----------------------AAACCGCGACGA-------------------------------------ACGAAG.................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................AGGATGT---GTTT-CAAT--------CAACGCGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
........................................................................................CGAGTGA-----------------------AAACCGCGACGA-------------------------------------.......................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
...........................................................................................................................................................................................................AAACT-----ACTGC---GGCAATCGT---G....................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................................................................ACT-----ACTGC---GGCAATCGT---G....................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...........................................................................................................................................................................................................................................ACAAAGAGCTC-GT-------------TGCG----------------------------------------------------T-------------------------------------CC........................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................T---GAACAAAGAGCTC-GT-------------TG......................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAT-CAACGCGTTGCA--------------------------------------GCAGCCA........................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................................................GT-------------TGCG----------------------------------------------------T-------------------------------------CCGAAATTATGTGG---------C..................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................CAACGCGAGTGA-----------------------AAACCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................AAAGAGCTC-GT-------------TGCG----------------------------------------------------T-------------------------------------CCGAAA....................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
............................................................................................................................................................................................................AACT-----ACTGC---GGCAATCGT---G....................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..................................................................................................................................................................................................................................................GCTC-GT-------------TGCG----------------------------------------------------T-------------------------------------CCGAAATTATG...............................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................AAGAGCTC-GT-------------TGCG----------------------------------------------------T-------------------------------------CCGAA.....................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GAATTGATTAATTGCGGCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
............TCGAATTGATTAATTGCGGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................T-------------TGCG----------------------------------------------------T-------------------------------------CCGAAATTATGTGG---------CA.................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT-CAACGCGTTGCA--------------------------------------GCAGCCCCCG------CA.............................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................GT---GAACAAAGAGCTC-GT-------------TGC.....................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCGTTGCA--------------------------------------GCAGCCCCCG------CAG............................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCCCCCG------CAGCAACAGCA---AC-------------------AAC.........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................GAGGATGT---GTTT-CAAT--------CAACGCGAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................GT---GAACAAAGAGCTC-GT-------------TGCG----------------------------------------------------................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------CAGCAACAGCA---AC-------------------AACA........18200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------CAGCAACAGCA---AC-------------------AACAA----...19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CAG------C-ATTGAATTGATTAATTGCGGCGCATGCCGAAAAGGGAAAAAAGGGAGGAAGT---GTTT-CAAT--------AAG--CGAGTGA-----------------------AAACCGCGACGA-----------------------------------------AGGAAAAAA----------------AAAC--CAACT------GCTGC---GGCAATTGT---GAACAAAGAACTC-GT-------------TGCG----------------------------------------------------T-------------------------------------CCGAAATTATGTGG---------CATAGTAACTAAGC-TATT--GGA---T-TTTC-CA------CTC----ATTTTCCAGTTGAAAT-CAACGCGCT-CA--------------------------------------GCAGCCCCCG------CAGCA---------AC-------------------AACAA----AACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCGCT-CA--------------------------------------GCAGCCCCCG------C..............................................2111.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................GA---T-TTTC-CA------CTC----ATTTTCCAG.........................................................................................................................2111.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGAAAT-CAACGCGCT-CA--------------------------------------GCA............................................................2311.0011000000
......................................................GGAGGAAGT---GTTT-CAAT--------AAG--CGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001000
..............GAATTGATTAATTGCGGCGCATGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-CAACGCGCT-CA--------------------------------------GCAGCCCCCG------CAGC...........................................2711.0010000100
..........................................................................................AGTGA-----------------------AAACCGCGACGA-----------------------------------------AGG................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
droYak3
CAG------C-ATAGAATTGATTAATTGCGGCGCATGCCGAAAAGGGAAAAAAGGGAGGATGT---GTTT-CAAT--------AAACGCGAGTGA-----------------------AAACCGCGACTAAGGAA----------------------------------------AAAAA----------------AAAC--CAA----C-----TGC---TT-AATCGT---GAACAAAGAACTC-GT-------------TGCG----------------------------------------------------T-------------------------------------CCGAAATTATGTGG---------CACAACAACTAAAC-TATT--GGA---T-TTCC-CA------CTC----ATTTTCCAGTTGAAAT-CAACGCGTTGCA--------------------------------------GCAGCCCCCG------CAGCAACAGCA---AC-------------------AACAA----AACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT-CAACGCGTTGCA--------------------------------------GCAGCCCCCG------C..............................................2611.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGCGTTGCA--------------------------------------GCAGCCCCC......................................................2111.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA--------------------------------------GCAGCCCCCG------CAGCA..........................................1811.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGCGTTGCA--------------------------------------GCAGCCCCCG------CAGC...........................................2611.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT-CAACGCGTTGCA--------------------------------------GCA............................................................1811.00100000100000
droEug1
CGG------C-ATAAAATTGATTAATTGCGGCGCATGCCGAAAAGGGAAAAAAGGGAGGATGT---GTTT-CAAT--------AAACGAGAGTGA-----------------------AAACCGCGACGA-----------------------------------------------------------------------ACAAGTGAC-----TGCGGCGACAATCGG---GAACAAAGAACTG------------------------------------------------------------------------A-------------------------------------TCAAAAATATGTGC---------CACAGCAATTAAAATTTTT--GGT---T-TTCC-AC------CAC----ATTTTCCAGTTGAAGATTATAGCGTTGCA--------------------------------------GCC------G------CAGCAACAGCA---AC------------C------AAC------AACSizeHit CountTotal NormTotal
No Reads
droBia1
CGG------T-AGGAAATTGATTAATTGCGGCGCATGCCGAAAAGGGAAAAAAGGGAGGATGT---GTTT-CAACA-------AAACGACGGGGA-----------------------AAACCGCGACGA-----------------------------------------------------------------------ACAAGTGAC--------------AAGCG-GCGGAACAAAGAACTGC-GTGT-----GCAAATG-G-----------------------------------------------------------------TT----------------------GTGGAAAATGCGTGG---------CTCGATGTTTAATC-T-TT--GGA---T-TTCC-TC------CCC----AATTTCCAGTTGAAAA-CTACGTGTTGCA--------------------------------------AC----------------------------------------------------------AACSizeHit CountTotal NormTotal
No Reads
droTak1
CGG------T-CGGGAATTGATTAATTGCGGCGCATGCCGAAAAGGGAAAAAAGGGAGGATGT---GTTT-CAACA-------AAACGACAGTGA-----------------------AAACCGCGACGA-----------------------------------------------------------------------ACAAGTGACTCTTCTGC---GACAGTTTTGCGGAACAAAGAACTC-GG-GTGGAAAAT---AGCG-----------------------------------------------------------------AA----------------------GTGGAGAATATCTAG---------CACAATGTTTAAAC-T-TT--GGA---T-TTCC-TG------CTC----ATTTTCCAGTTGAAGA-ATACGTGTTGCA--------------------------------------ACA------------------ACAAAGGCAGC------------CCCCTC-GAG------AAGSizeHit CountTotal NormTotal
No Reads
droEle1
TGG------G-CGAAAATTGATTAATTGCGGCGCATGCCGAGAAGGGAAAAAAGGGAGGATGT---GTTTTCAAT--------AAACGAGAGTGA-----------------------AAACCGCGACGA-----------------------------------------------------------------------ACAAGTGAC-----TGC---AGAAATCAA---GAACAAAGAACTC-GA-------------TG----------------------------------------------------------------------------------------------GGAAATATGTGG---------CACAACGCCTAAAT-T-TT--GGC---TTTTCC-TC------CTC----ATTTTCCAGTTGAAAA-GTACGCGTTGCA--------------------------------------GCAGCAGCAG------CAGCAACAACAGCAAC-------------------AAC------AACSizeHit CountTotal NormTotal
No Reads
droRho1
TGG------G-CAAGAATTGATTAATTGCGGCGCATGCCGAAAAGGGAAAAAAGGGAGGATGT---GTTTTCAAT--------AAACGAGAGTGA-----------------------AAACCGCGACGA-----------------------------------------------------------------------ACAAGTGAC-----TGC---AGAAATCGG---GAACAAAGAACTT-GT--------------GCT----------------------------------------------------T-------------------------------------C----AATATGTGG---------CACAACGCCTAAAT-T-TT--GGA---TTTTCC-TC------CTC----ATTTTGCAGTTGAAAA-GTACGCGTTGCA--------------------------------------GCAACAAC---------------AAAAGCAGC------------CAGCGGCAGCC-----AAASizeHit CountTotal NormTotal
No Reads
droFic1
TGG------T-CGAGAATTGATTAATTGCGGCGCATGCCGAAAAGGGAAAAAAGGGAGGATGT---GTTT-CAAT--------AAACGAGAGTGA-----------------------AAACCGCGACGA-----------------------------------------------------------------------ACAAGTGAC-----TGC---TGCATTCGG---GAACAAAGAACTT-AC-------------TA---------------------------------------------------------------------------------------------GGAAAATATGTGG---------CACAACGCCTAAAA-C-TC--GAA---ACTTCCTTC------CTT----GTTTTGCAGTTGGAAC-GATTGCGTTGCA--------------------------------------GCAGCAGCAG------CAGCA---------AC-------------------AACAAAAAACACSizeHit CountTotal NormTotal
No Reads
droKik1
CTA------GCAGAGAATTGATTAATTGCGGCGCATGCCGAAAAG---------GGAGGATGC---GTTG-TA-G--------AAACGAGAGTGAAAAGAAAACCGACGAA-CTGCACCAGCAGCGGC------T-----------------C------------------------------------------------GTTCGC-----------------A--CGG---GAACAAAGAACCAA-AAGT-----GCAG-GGCG----------------------------------------------------C-------------------------------------TGAAAAATATGTGC---------AACAGCGCCTAAAT-T-GT--GC----TTT-TC-TA--C---TTCGTAACTCTTGCAGTTGGAAC-CTTCTTGCTGG------------------------------------------------G------CAGCAA--------AC-------------------CAT------AACSizeHit CountTotal NormTotal
No Reads
droAna3
CAG------C-CAAGAATTGATTAATTGCGGCGCATGCCGAAGAG---------GGAGGATATTACA-TT-CAACAGC------GA--AACAC-AGAAAAAAAGAGACGAAAGTGTGCAGAACGAGGA------A-----------------A------------------------------------------------ACAAGCC----------------------TCGAAACAAAGAACAAA-TAAT-----GCAGATGCG----------------------------------------------------T---------------------------------------GAAAATATGTGC---------CGCACCGTTTAAGC-C-GT--GTT---TTTTTC-TC--CATACTT----GTCTTGCAGTTGAAAC-ATTTGCGTTGCA--------------------------------------GCT------G------CAGCAAAAACA---AC-------------------AAAGC----AACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................AAAAAAAGAGACGAAAGTGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAAC-ATTTGCGTTGCA--------------------------------------GCT------G------CAGC...........................................2611.001010000
droBip1
CAG------C-CGAGAATTGATTAATTGCGGCGCATGCCGAAGAG---------GGAGGATAT---ATT--CAACAGC------GA--AACAC-AGAAAAAAAGAGACAAAAGTGTGTTAAACGAGGA------A-----------------A------------------------------------------------ACAAGCC----------------------TCGAAACAAAGAACAAA-TAAT-----ACAGAAGCG----------------------------------------------------T---------------------------------------GAAAATATGTGC---------CGCACCGTCTAAGC-C-GT--GTC---TTTTCC-A-----TACTT----GTCTTGCAGTTGAAAC-ATTTGCGTTGCA--------------------------------------GCT------G------CAGCAAAAACA---AA-------------------AAC------AACSizeHit CountTotal NormTotal
No Reads
dp5
AGG----TGC-CGACAATTGATT-ATTGCGGCGCATGCCGAAGAG---------GGAGGATA------TT-CAACAG------AAACGAGTGTAA-----------------------AAACCGAGGA------A-----------------A--------------ACG---------A----------------AAA--ACAAGTGAC-----TGC------AATC-----AAACAAAGAACAAA-TTGT-----GCAC-----TGCACTTTGGTGCTGTG--------------------------------------------------GTATATTTAT---TGCCTGCCTTTAGAGAATATGTGCGATATGTGATACTTTA-ATAAGC-CG-T--GTA-CT-----C-TT------GTT----TTTTTCCAGTTGTGGC-G-TTGCGTTACA-----G---AAAA----------------------------GAGTCAG------CAACAACAAATACAAC-------------------AGC------GAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACA-----G---AAAA----------------------------GAGTCAG------C..............................................1911.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................TAAGC-CG-T--GTA-CT-----C-TT------GTT----TTTTTCCAG.........................................................................................................................2811.0010000001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTACA-----G---AAAA----------------------------GAGTCAG------CAAC...........................................2311.0011000000000
droPer2
AGG----TGC-CGACAATTGATT-ATTGCGGCGCATGCCGAAGAG---------GGAGGATA------TT-CAACAG------AAACGAGTGTAA-----------------------AAACCGAGGA------A-----------------A--------------ACG---------A----------------AAA--ACAAGTGAC-----TGC------AATC-----AAACAAAGAACAAA-TTGT-----GCAC-----TGCACTTTGGTGCTGTG--------------------------------------------------GTATATTTAT---TGCCTGCCTTTAGAGAATATGTGCGATATGTGATACTTTA-ATAAGC-CG-T--GTA-CT-----C-TT------GTT----TTTTTCCAGTTGTGAC-G-TTGCGTTACA-----G---AAAA----------------------------GAGTCAG------CAACAACAAATACAAC-------------------AGC------GAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACA-----G---AAAA----------------------------GAGTCAG------C..............................................1915.005400001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAC-G-TTGCGTTACA-----G---AAAA----------------------------GAG.........................................................2211.001001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................G-TTGCGTTACA-----G---AAAA----------------------------GAGTCAG------CA.............................................2511.001000010
............................................................................................................................................................................................................................................................................................................................................................CCTGCCTTTAGAGAATATGTGCG...........................................................................................................................................................................................2311.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAC-G-TTGCGTTACA-----G---AAAA----------------------------GAGTCAG------C..............................................2711.001010000
droWil2
CAG------C-AGAGAATTGATTGATTGCGGCGCATGCCGAAGAA------GAGGGAGGATAT------T-CAAAAGAAAACGCAAAACGAGTAA-----------------------AAAGT-----------AAAATAAAGTCACACACAAAAAAAAAGCGAGAAGCGAATAGAAGTA----------------AAAT--CAAGT------ATTGC---AGTAATC-----AAACAAAGAAAGAA-TTGT-----GCAC-----CGAGCATATTTCATTTGTTAAACAATT-----TATGCTC-------------TCAATAAAATTGACCGTGTATTTTTCCATTCCTC---------------------------------TCTTTTTC-T-CT--GTT-CT--TTTT-TT------TTT-TTTTTGTTTTAGTTGAGAC-TTTTGCGTTGCGGTGCAGA--AAAGGCAGCGACAACAATAACAACGAGCAGCAGCCGCAG------CAGAAGCAGAA---AC-------------------AACAA----CAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAC-TTTTGCGTTGCGGTG..................................................................................................1812.00201010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGACAACAATAACAACGAGCAGCAGCC.........................................................2911.00110000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACAACGAGCAGCAGCCGCAG------CAG............................................2511.00100100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTTGCGGTGCAGA--AAAGGC......................................................................................2211.00100100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCGGTGCAGA--AAAGGCAGC...................................................................................2211.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAATAACAACGAGCAGCAGCCGCA......................................................2611.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAATAACAACGAGCAGCAGC..........................................................2211.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAGA--AAAGGCAGCGACAAC.............................................................................2211.00101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCGTTGCGGTGCAGA--AAAGG.......................................................................................2211.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGAC-TTTTGCGTTGCGGTG..................................................................................................2311.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCCGCAG------CAGAAGCAGA.....................................2111.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGCAGCAGCCGCAG------CAGAAGC........................................2411.00100100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTGCGGTGCAGA--AAAGGCAGC...................................................................................2311.00100010
droVir3
CGG------CTATAAAATTGATT-ATTGCGGCGCATGCCGAAAAG---------GGAGGAT--------T-CAACAGC------AA--AGTGTAA-----------------------AAAAAGA------------------------------------------ATGAAAA--AAAAAAACAATGTAGGAA--AAA--ACAAGCC-----TATGC---ACC---------AAACAAAGAAATC-GC--------G-----ATCTACTCTTA------------AGCTACTAAAAATATGCTTATAG-----------------------------------------------------------GG-----------CAGCA-ATAAAC-TG-TGTGCG---T-T-TT-TATTT-T-TTT-TATTACTTGCAGTTGAAGC-ATTTGCGTTGCGGTGTACA--AAAA-------------------------GAAGCAACAG------CAAAA---ACAACAACAACAACAGCAGCG------GGC------GACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGC-ATTTGCGTTGCGGT...................................................................................................2013.003000000000030000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGGTGTACA--AAAA-------------------------GAAGC..........................................................2012.002000000010000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGC-ATTTGCGTTGCGGT...................................................................................................1912.002000000000000010000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GC-ATTTGCGTTGCGGTGTACA--AAA.........................................................................................2411.001000000000000000000000000000000000001000000000000000000000000000
.....................................................................................................................................................................................................................................................C-GC--------G-----ATCTACTCTTA------------AGC.............................................................................................................................................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGTGTACA--AAAA-------------------------GAAGCAACAG------C..............................................2511.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................AACAATGTAGGAA--AAA--ACAAG................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000100
....................................GCCGAAAAG---------GGAGGAT--------T-CAACAGC------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................AAGAAATC-GC--------G-----ATCTACTCTT.............................................................................................................................................................................................................................................................................................2111.001000000010000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA--AAAA-------------------------GAAGCAACAG------CAAAA---AC.....................................2411.001000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCGGTGTACA--AAAA-------------------------GAAGC..........................................................2211.001000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------------------GAAGCAACAG------CAAAA---ACAACAACAAC............................2711.001000000000000010000000000000000000000000000000000000000000000000
..................................ATGCCGAAAAG---------GGAGGAT--------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTTGCGGTGTACA--AAAA-------------------------GAAGC..........................................................2411.001000000010000000000000000000000000000000000000000000000000000000
...............AATTGATT-ATTGCGGCGCATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCGGTGTACA--AAAA-------------------------GAAG...........................................................2111.001000000000100000000000000000000000000000000000000000000000000000
................ATTGATT-ATTGCGGCGCATGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGCGTTGCGGTGTACA--............................................................................................1911.001000000000000000000010000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAGCAGCG------GGC------...2030.331000000000000010000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAGCAGCG------GGC------...1930.331000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAGCG------GGC------...1740.251000000000000000000000000000000000000000000000000000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAACAGCAGCG------GG..........2140.251000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAA---ACAACAACAACAACAGC......................22200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
CTAAAAAAGCAATAAAATTGATT-ATTGCGGCGCATGCCGAAAAG---------GGAGGAT--------T-CAACAGC------AA--AGAGTGG-----------------------AAAA-GAAAA----------------------------------------------------AAACAATGTAGGAA--AAA--ACATGCGAA-----TGC---ACC---------AAACAAAGAAATC-GC-------------TAGCTATTG-----------TTTAAGCAACTAAAAATATGCTTATAA-----------------------------------------------------------AG---------CATA-CAAAT-AAT-T-TT--GGT---GTTTGT-TT------TTCG-ATTATTTGCAGTTGAAGC-ATTTGCGTTGCAATACACA--AAAA----------------------------GCAGTAG------CAGCGACACCAACAAC-------------------AAC------AAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAAGC-ATTTGCGTTGC......................................................................................................1911.001000100
.......................................GAAAAG---------GGAGGAT--------T-CAACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAG------CAGCGACACCAACAAC-------------------AAC------...2311.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTAG------CAGCGACACCAACAAC-------------------AAC------...2411.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGC-ATTTGCGTTGCAATACA................................................................................................2311.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATACACA--AAAA----------------------------GCAGTAG------CAGCGAC........................................2711.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACACA--AAAA----------------------------GCAGTAG------C..............................................1811.001100000
droGri2
CGG------CCAGAAAATTGATT-ATTGCGGAGCATGCCGAAAAG---------GGAGGAT--------T-TAGCAG--------A--AGAGTGG-----------------------AAACGGAAAACA-------------------------------------GAAAAGAAAAAAAAAACAAAGTAGGAAAAAAATCACAAGCC-----TATGC---ACCAA---C---AAACAAAGAAGTC-GT--------G------CC--------------------------TAAAAATATGCCTATAGTGTATACTAC-------------------------------------TAAAACCTGTGTGT---------GACTTCTTTTTTAC-A--T--GGTTT-TTT-TT-TT--C-TATTCG-TTTATTTGCAGTTGAAGC-ATTTGCGTTGCGGTGTGTAGAAAAC----------------------------GAATAAGAAGAAGCAG---CAGCA---GC-------------------AAC------AACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC----------------------------GAATAAGAAGAAGCAG---CAGC.....................................2311.00101
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTTGCGGTGTGTAGAA...........................................................................................1811.00110
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCGTTGCGGTGTGTA..............................................................................................1811.00110

Generated: 05/18/2015 at 10:26 PM