ID:

dsi_22085

 Coordinate:

node_39788:43690-43839 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.5 -15.1 -14.5

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TTCCTCAGCTTCACGCAGGGCTGCGTCATCGTACCCACCGTCTGCTCCAAACTGTGGTACCACCGCCAGCGCAACATCTTCTGGTCGGTCTCGCTGGCCGTCTTCCTGCTCAGCATGTTCGATCCCGGCATGGTGGTAAGTTGGACACGTCTCTATTGCTCATGGGAATTGTTGTGATTTCACCGTCATTTCAAAAACAGAACATTCACGAAGAGTACTTCCCCACGCGCTACTCCAAGAGCGGGGACGA
***********************************************************..((.(((((((..(((((....)))..))..))))))).)).....................******************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M053
female body
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M023
head
 O001
Testis
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
...........................................................CCACCGCCAGCGCAACATCTT.......................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0
........................................TCTGCTCCAAACTGTGGTACC............................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................GCGCAACATCTTCTGGTCGG.................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..........................................TGCTCCAAACTGTGGTACCACC.......................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................................................................CTTCTGGTCGGTCTCGCTGGC........................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................................................................CGTCTTCCTGCTCAGCATGTTCGA................................................................................................................................ 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.....................................................................................CGGTCTCGCTGGCCGTCTTCCTGCTC........................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.......................CGTCATCGTACCCACCGTCTG.............................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
............................................................................................................CTCAGCATGTTCGATCCCGGC......................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...............CAGGGCTGCGTCATCGTACCC...................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................................CAGCGCAACATCTTCTGGTCGGTCT............................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................TCTTCTGGTCGGTCTCGCTGGC........................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................GCAACATCTTCTGGTCGGTCT............................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......AGCTTCACGCAGGGCTGCGTCT.............................................................................................................................................................................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0
.............................................................................................CTGGCCGTCTTCCTGCTCAGC........................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.........................................................................ACATCTTCTGGTCGGTCTCGC............................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................GTCTGCTCCAAACTGTGGTAC.............................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..........................................................................................TCGCTGGCCGTCTTCCTGCT............................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................................AGCGCAACATCTTCTGGTCGG.................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0
....................................................................GCGCAACATCTTCTGGTCGGC................................................................................................................................................................. 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0
.......................................................................................................................................................................................................................TACTTCCCCACGCGCTACTCCAAGAGC........ 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0
...........................................................................ATCTTCTGGTCGGTCTCGCTG.......................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.........................TCATCGTACCCACCGTCTGCT............................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.....................................................................................................................................TGGTAAGTTCGTCACGTCGC................................................................................................. 20 3 3 0.67 2 0 0 2 0 0 0 0 0 0
..................................................................................................................................................................................................AAACAGAACATTCACGAGGAGA.................................. 22 2 2 0.50 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................TGGTGTGGTTTCACCGTC............................................................... 18 2 2 0.50 1 0 0 0 0 0 0 0 1 0
....................................................................................................................GTTCGATCCCGTCAT....................................................................................................................... 15 1 12 0.25 3 0 0 1 0 0 0 0 0 2
..................................................................................................................................TGGTTGTAAGTTGGA......................................................................................................... 15 1 11 0.09 1 0 0 0 0 0 0 0 1 0
..............................................................................................................................GGCAAGGTGGTAAGT............................................................................................................. 15 1 16 0.06 1 0 0 0 0 0 0 0 1 0
...................................................................................GTAGGTCTCGCTGGCT....................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 1
....................................................................................................................GTTCGATCCCGTCATC...................................................................................................................... 16 2 20 0.05 1 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

AAGGAGTCGAAGTGCGTCCCGACGCAGTAGCATGGGTGGCAGACGAGGTTTGACACCATGGTGGCGGTCGCGTTGTAGAAGACCAGCCAGAGCGACCGGCAGAAGGACGAGTCGTACAAGCTAGGGCCGTACCACCATTCAACCTGTGCAGAGATAACGAGTACCCTTAACAACACTAAAGTGGCAGTAAAGTTTTTGTCTTGTAAGTGCTTCTCATGAAGGGGTGCGCGATGAGGTTCTCGCCCCTGCT
********************************************************************************************************************************..((.(((((((..(((((....)))..))..))))))).)).....................*********************************************************** 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 M024
male body		 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
.....GTCGAAGTGCGTCCCGACGCA................................................................................................................................................................................................................................ 21 0 1 2.00 2 0 2 0 0 0 0 0
...................................................................................................................................CCACCATTCAACCTGTGCAGAGATA.............................................................................................. 25 0 1 2.00 2 0 2 0 0 0 0 0
.....................................................................................................................................................................................................................TCATGAAGGGGTGCGCGATG................. 20 0 1 2.00 2 1 1 0 0 0 0 0
...............................................................................................................................................................AGTACCCTTAACAACACTA........................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0
..........................................................TGGTGGCGGTCGCGTTGTAG............................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................................................................................................GGCAGTAAAGTTTTTGTCTTGTAAGTGC........................................ 28 0 1 1.00 1 1 0 0 0 0 0 0
......TCGAAGTGCGTCCCGACGCAGTAGC........................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................................................................................GTGGCAGTAAAGTTTTTGTCTTGTAA............................................ 26 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................CAGAAGGACGAGTCGTACAA................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
..........................................................................................................................................................................CAACACTAAAGTGGCAGTAAAGT......................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................................................................................................TAAAGTTTTTGTCTTGTAAGTGCTTCT.................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................TGGCAGTAAAGTTTTTGTCTTG............................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................................................TAGGGCCGTACCACCATTCAAC........................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
................................TGGGTGGCAGACGAGGTTTGA..................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................................GATGAGGTTCTCGCCCCTGCT 21 0 1 1.00 1 1 0 0 0 0 0 0
.................................GGGTGGCAGACGAGGTTTGAC.................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................TTTGTCTTGTAAGTGCTTC..................................... 19 0 1 1.00 1 0 1 0 0 0 0 0
............................................................GTGGCGGTCGCGTTGTAG............................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0
......................................................ACGATGGTGGCGGTTGCGTT................................................................................................................................................................................ 20 2 1 1.00 1 0 0 1 0 0 0 0
...........................................CGAGGTTTGACACCATGGTGG.......................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................................AGTCGTACAAGCTAGGGCCGTA....................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0
............................................................................................CGACCGGCAGAAGGACGAGTCGTACAAG.................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................GTCGTACAAGCTAGGGCCGTC....................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
........................................................................................................................................................................................................TTGTAAGTGCTTCTCATGAAG............................. 21 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................................................................................................TAAAGTTTTTGTCTTGTAAGTGCTTC..................................... 26 0 1 1.00 1 0 1 0 0 0 0 0
..................................................................GTCGCGTTGTAGAAGACCAGCCAGAGC............................................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0
.......................................................................................CAGAGCGACCGGAAGAAAGAT.............................................................................................................................................. 21 3 2 0.50 1 0 0 0 1 0 0 0
........................................................................................AGAGCGACCGGAAGAAAGACGT............................................................................................................................................ 22 3 3 0.33 1 0 0 0 1 0 0 0
........................................................................................AGAGCGACCGGAAGAAAGACGC............................................................................................................................................ 22 3 3 0.33 1 0 0 0 1 0 0 0
.......................................................................................................................................................................................................................ATGCAAGGGTGCGCAATGA................ 19 3 7 0.29 2 0 0 2 0 0 0 0
.......................................CAGACGAGGTTAGAAAACATG.............................................................................................................................................................................................. 21 3 4 0.25 1 0 0 0 0 1 0 0
.........................................................................................................................................................................................................................TAAGGGGTGCGCAATGAG............... 18 2 5 0.20 1 1 0 0 0 0 0 0
..................................................................................CCAGCCAAAGCGAGCGG....................................................................................................................................................... 17 2 6 0.17 1 0 0 1 0 0 0 0
...........................................................................................................................................................................................................................AAGGGTGCGCAATGAG............... 16 2 19 0.11 2 0 0 0 0 1 0 1
......................................................ACCATGGTGGCGGGCCCGA................................................................................................................................................................................. 19 3 12 0.08 1 0 0 0 0 0 1 0
.........AAATGCGTCCCCACGGAGT.............................................................................................................................................................................................................................. 19 3 13 0.08 1 0 0 1 0 0 0 0
......................................................................................................AGGGACGAGCCGTACATGC................................................................................................................................. 19 3 19 0.05 1 0 0 0 1 0 0 0
...........................................................................................................................................................................................................................AGGGGTGCACAATGAG............... 16 2 20 0.05 1 0 0 0 1 0 0 0
........................................................................................................................................................................................................................TGCAAGGGTGCGCAATGA................ 18 3 20 0.05 1 0 0 0 0 0 1 0
...............................................................................................................................................................................................................................GGGCGCGAGGAGGTTC........... 16 2 20 0.05 1 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 node_39788:43640-43889 - dsi_22085 TTCCTCAGCTTCACGCAGGGCTGCGTCATCGTACCCACCGTCTGCTCCAAACTGTGGTACCACCGCCAGCGCAACATCTTCTGGTCGGTCTCGCTGGCCGTCTTCCTGCTCAGCATGTTCGATCCCGGCATGGTGGTAAGTTGG-------------------------ACAC-GTCTCTATTGCTCA--TGGG--------------------------------------------AATTGTTGTGATTTC---AC---CGTCATTTCAAAA----------------------------------------------------------------------------------------ACAGAACATTCACGAAGAGTACTTCCCCACGCGCTACTCCAAGAGCGGGGACGA
droSec2 scaffold_8:852231-852480 - TTCCTCAGCTTCACGCAGGGCTGCGTCATCGTACCCACCGTCTGCTCCAAACTGTGGTACCACCGCCAGCGCAACATCTTCTGGTCGGTCTCGCTGGCCGTCTTCCTGCTCAGCATGTTCGATCCCGGCATGGTGGTAAGTTGG-------------------------ACAC-GTCTCTATTGCTCA--TGGG--------------------------------------------AATTGTTGTGATTTC---AC---CGTCATTTCAAAA----------------------------------------------------------------------------------------ACAGAACATTCACGAAGAGTACTTCCCCACGCGCTACTCCAAGAGCGGTGACGA
dm3 chrX:18548724-18548974 - TTCCTCAGCTTCACGCAGGGCTGCGTCATCGCACCCACCGTCTGCTCCAAACTGTGGTACCATCGCCAGCGCAACATCTTCTGGTCGGTCTCGCTGGCCGTCTTCCTGCTCAGCATGTTCGATCCGGGCATGGTGGTAAGTTGG-------------------------ATACCGCCTCTATTGCTCA--CGGG--------------------------------------------AATTGTTGTGATTTC---GT---CGCCCTCTCAAAA----------------------------------------------------------------------------------------ATAGAACATTCGCGAAGAGTACTTCCCCACGCGCTACTCCAAGAGCGGTGACGA
droEre2 scaffold_4690:8858403-8858651 - TTCCTCAGCTTTACGCAGGGCTGCGTCATCGCACCAACCGTCTGCTCCAAAGTGTGGTACCACCGCCAGCGCAACATCTTCTGGTCGGTCTCGCTGGCCGTCTTCCTGCTCAGCATGTTCGATCCAGGAATGGTGGTAAGTTGT-------------------------ATTC-GCCACTATTTGTCA--CTGG--------------------------------------------AATAATTGTGTTTTC---GT---CGCCCATTCATA-----------------------------------------------------------------------------------------ACAGAACATTCGCGAAGAGTACTTCCCCACGCGCTACTCCAAGAGCGGCGACGA
droYak3 X:17174497-17174745 - TTCCTCAGCTTTACGCAGGGCTGCGTCATCGCACCCACTGTCTGCTCCAAAGTGTGGTACCATCGCCAGCGCAACATCTTCTGGTCGGTCTCGCTGGCCGTCTTCCTGCTCAGCATGTTCGATCCGGGAATGGTGGTAAGTTGG-------------------------ATGT-GCCTCTATTCGTCA--TTGG--------------------------------------------AATTATTGTAATTTC---GT---TGCCCTTTCATA-----------------------------------------------------------------------------------------AAAGAACATTCGCGAAGAGTACTTCCCCACGCGCTACTCCAAGAGCGGTGACGA
droEug1 scf7180000409528:758894-759146 - TTCCTCAGCTTTACGCAGGGCTGCGTCATTGCGCCAACTATCTGCTCTAAAGTGTGGTATCATCGCCAGCGCAATATCTTCTGGTCGGTCTCGCTGGCCGTCTTCCTGCTCAGCATGTTCGATCCGGGCATGGTGGTAAGTTGA-------------------------ACTT-TGCTCTGCTT---TTTTGAGAAACCCTAA-----------------------------------AATGATTGTGATTTC---CT---TTTT---------------------------------------------------------------------------------------------CTGTGAAGAACATTCGCGAGGAGTACTTCCCCACGCGCTACAGCCAAAGCGGCGATGA
droBia1 scf7180000302432:652181-652425 + TTCCTCAGCTTCACGCAGGGCTGCGTCATTGCGCCCACTGTCTGCTCCAAGGTGTGGTACCACCGCCAGCGCAACATCTTCTGGTCGGTCTCTCTGGCCGTCTTCCTGCTCAGCATGTTTGACCCGGGCATGGTGGTAAGTTGG-------------------------ATGT-GGCTCCATTTGGCC--CTGC--------------------------------------------TCTAATTGTGGCCT-----------TCCACTC----------------------------------------------------------------------------------------CCGCACAGAACATTCGCGAGGAGTACTTCCCCACGCGCTACTCCCAGAGCAGCGACGA
droTak1 scf7180000414301:58630-58811 + TTCCTCAGCTTCACGCAGGGCTGCGTGATAGCGCCCACCGTTTGCTCCAAAGTGTGGTATCACCGCCAGCGAAACATCTTCTGGTCGGTCTCGCTGGCCGTCTTCCTGCTCAGCATGTTTGATCCGGGAATGGTGGTAAGATGA-------------------------AC-----CTATAAAGCTTA--AGA-----------------------------TTCAATG---------AATTATTTTGAATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491006:810016-810273 - TTCCTCAGCTTCACGCAGGGCTGCGTGATTGCGCCCACCATCTGCTCGAAGGTGTGGTACCACCGCCAGCGCAACATCTTCTGGTCCGTCTCGCTGGCCGTCTTCCTGCTCAGCATGTTCGATCCGGGCATGGTGGTAAGTTCT--G------------A--------------------------------------------------------------TCCAATG---------CCTTATG-CT-----ATA------------------TATATGCCTGTGCTTATGTTATGTACTCCTTCAT-------------------------------------------------CCCATCAAGAACATACGCGAGGAGTACTTCCCCACGCGATACACCCAGAGCGGCGACGA
droRho1 scf7180000779985:1297189-1297433 - TTCCTCAGCTTCACGCAGGGCTGCGTCATTGCGCCCACTATTTGCTCCAAGGTGTGGTATCACCGCCAGCGCAACATCTTCTGGTCCGTCTCGCTGGCCGTCTTCCTGCTCAGCATGTTCGATCCCGGCATGGTGGTAAGTTGG-------------------------ATTT-CGCCTTATGTGCCA--CCCA--------------------------------------------AATGATTGTGTTTT----GT---GATCC--------------------------------------------------------------------------------------------CTGCAAAGAACATTCGCGAGGAGTACTTCCCCACGCGCTACACCCAGAGCGGCGACGA
droFic1 scf7180000453829:179538-179801 + TTCCTCAGCTTCACGCAGGGCTGTGTCATTGCGCCGACGATCTGCTCGAAGGTGTGGTACCATCGCCAGCGCAACATCTTCTGGTCGGTCTCGCTGGCCGTCTTCCTGCTCAGCATGTTCGATCCGGGCATGGTGGTAAGTTGA-------------------------ACTT-TGCCCTGCTT---GCTC----------------CAC---------TGCTCCAATGCTCC-----AATGATTGTGTTGTT---CTTGCGAC--TCC----------------------------------------------------------------------------------------CCCGTTAAGAACATTCGCGAGGAGTACTTCCCCACGCGGTACACCCAGAGTGGCGACGA
droKik1 scf7180000302685:709181-709427 + TTCCTCAGCTTTACCCAGGGCTGCGTCATTGCGCCCACAGTGTGCTCCAAGGTGTGGTACCACCGGCAGCGCAACATCTTCTGGTCGGTCTCCCTGGCCGTCTTCCTGCTGAGCATGTTTGATCCGGGCATGGTGGTGAGTTGA-------------------------CCTT-----CTGTTT---TT-----AAGCCCTCAAACTAAGCGCTCATACT------------------AGTCATC-----------CT---AATC---------------------------------------------------------------------------------------------CTTTCCAGAACATTCGCGAGGAGTATCTTCCCACGCGTCAC------AATGCCGACGA
droAna3 scaffold_13248:1717800-1718044 - TTCCTGAGCTTCACCCAGGGCTGCGTCATAGCGCCCACCATCTGCTCGAAGGTGTGGTACCATCGCCAGCGCAACATCTTCTGGTCTGTCTCGCTGGCCGTCTTCCTCCTCAGCATGTTTGATCCAGGAATGGTGGTAGGTTAT-------------------------CCA--------------------------------------------------------------------------T------------------ATTTCAAAATATATCCC-----------------------CATTCCAC------------------------TAC---TACGCCGTACTT----CTCGTAGAACATCCGCGAGGAATACTTCCCCACCAGATACTCCCAAAGCCCTGATGA
droBip1 scf7180000395958:92683-92926 + TTCCTGAGCTTCACCCAGGGCTGCGTTATAGCGCCCACCATCTGCTCGAAGGTGTGGTATCACCGCCAGCGTAACATCTTCTGGTCTGTCTCGCTGGCCGTCTTCCTCCTCAGCATGTTTGATCCTGGAATGGTGGTAAGGTTA--------------------------------------------------------------------------------------------------TACATA------------------TTTCATAACAAATCCT-----------------------CAATCCCC------------------------AACGAT------G--TATGC-CTATCTAGAACATCCGCGAGGAATACTTCCCTACCAGATACTCCCAAAGCCCCGATGA
dp5 XL_group3a:682723-682981 + TTCCTCAGCTTCACCCAGGGCTGTGTGATAGCCCCCACCATATGCTCCAAGGTGTGGTACCATCGCCAGCGGAACATCTTCTGGTCCGTCTCGCTGGCCGTCTTCCTTCTCAGCATGTTCGATCCGGGAATGGTGGTGAGTACA--GCTTCTCCCCTCGAGC---------------------------------------------CAG---------TACCTCTCTGTCCCAACCAA--TATA-CA-----ATA--------------------------------------------------------------------------------------------TTTTCATGT-GTATGCAGAACATCCGCGAGGAATACTTCCCTACGAAATATGAGCACAACGCTGACGA
droPer2 scaffold_39:230112-230371 + TTCCTCAGCTTCACCCAGGGCTGTGTGATAGCCCCCACCATATGCTCCAAGGTGTGGTACCATCGCCAGCGGAACATCTTCTGGTCCGTCTCGCTGGCCGTCTTCCTTCTCAGCATGTTCGATCCGGGAATGGTGGTGAGTACA--GCTCCTCCCCTCGAGC---------------------------------------------CAG---------TACCTCTCTGTCCCAACCAT-TTATA-CA-----ATA--------------------------------------------------------------------------------------------TTTTCATGT-GTATGCAGAACATCCGCGAGGAATACTTCCCTACGAAATATGAGCACAACGCTGACGA
droWil2 scf2_1100000004909:11150033-11150286 + TTCCTTAGCTTTACTCAGGGTTGTGTTATAGCTCCAACTGTATGCTCCAAAGTCTGGTATCATCGACAGCGCAATATCTTTTGGTCTGTCTCCTTGGCCGTCTTCTTACTCAGCATGTTTGATCCCGGCATGGTGGTAATTTCT------------TTGAGT---------------------------------------------------------------------------------------------------------TCTAACGATAC-----------------------------------TCTACTTTCCATTGACTCCTCATT------TTTGGTTTCTTT----TTATCAGAACATACGTGAAGAATACTTTCCAACACGTTATACCCAAAATACAGACGA
droVir3 scaffold_12970:11731299-11731541 - TTTCTTAGCTTCACTCAGGGCTGTGTGATAGCGCCGACGGTATGCTCGAAGATCTGGTACCATCGTCAACGCAACATCTTTTGGTCCGTTTCGCTAGCCGTCTTTTTGCTCAGCATGTTTGATCCCGGCATGGTGGTCAGTATA--G------------AATTAGTTGGCCAT-TTGTTT-------A--CT------------------------------------------------TAACTATA------------------TTTCATAAT-----------------------------------------------------------------------------------ATTTGCAGAACATACGTGAGGAATACTTTCCCACACGCTATACACAATCATCGGATGA
droMoj3 scaffold_6308:2462114-2462380 - TTTCTCAGCTTCACGCAGGGCTGTGTGATAGCGCCGACGGTCTGTTCCAAGATCTGGTATCATCGTCAGCGCAACGTCTTCTGGTCCGTCTCGCTGGCCGTCTTCCTGCTCAGCATGTTCGATCCCGGCATGGTGGTTAGCTGACAATCTCTCTCTCTCTCT---------------------------------------------C-------------TCTCTCTCTCTCTCTCGT-TTATA-TA------------------TTTATTGAC--------------------------------------------------------------TTCAGT------G--AATTC-ATTTGTAGAATATACGCGAGGAGTACTTTCCCACACGCTACAACCAGCCAACGGATGA
droGri2 scaffold_15203:3697955-3698209 - TTTCTCAGCTTCACTCAGGGCTGTGTTATAGCGCCCACGGTATGCTCAAAGATTTGGTACCATCGACAACGCAATATCTTTTGGTCTGTCTCTCTGGCCGTCTTCATGCTTAGCATGTTTGATCCGGGCATGGTTGTAAGTGAA--AACT-----CTTGA---------ACA-----------------------------------CAG---------TAC-------------------------------------------------------------------------------------------TGTACACTCTATTTGCAATCCATA------TATACTTTCCAC----TTTGCAGAACATACGTGAGGAGTATTTTCCCACACGCCACACCCAACCGTCAGATGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTCCTCAGCTTCACGCAGGGCTGCGTCATCGTACCCACCGTCTGCTCCAAACTGTGGTACCACCGCCAGCGCAACATCTTCTGGTCGGTCTCGCTGGCCGTCTTCCTGCTCAGCATGTTCGATCCCGGCATGGTGGTAAGTTGG-------------------------ACAC-GTCTCTATTGCTCA--TGGG--------------------------------------------AATTGTTGTGATTTC---AC---CGTCATTTCAAAA----------------------------------------------------------------------------------------ACAGAACATTCACGAAGAGTACTTCCCCACGCGCTACTCCAAGAGCGGGGACGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................CCACCGCCAGCGCAACATCTT................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
........................................TCTGCTCCAAACTGTGGTACC...................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
....................................................................GCGCAACATCTTCTGGTCGG........................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
..........................................TGCTCCAAACTGTGGTACCACC................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
.............................................................................CTTCTGGTCGGTCTCGCTGGC..............................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
..................................................................................................CGTCTTCCTGCTCAGCATGTTCGA......................................................................................................................................................................................................................................................................................................2411.00100000010000000000
.....................................................................................CGGTCTCGCTGGCCGTCTTCCTGCTC.................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
.......................CGTCATCGTACCCACCGTCTG....................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
............................................................................................................CTCAGCATGTTCGATCCCGGC...............................................................................................................................................................................................................................................................................................2111.00101000000000000000
...............CAGGGCTGCGTCATCGTACCC............................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
..................................................................CAGCGCAACATCTTCTGGTCGGTCT.....................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
............................................................................TCTTCTGGTCGGTCTCGCTGGC..............................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
......................................................................GCAACATCTTCTGGTCGGTCT.....................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
......AGCTTCACGCAGGGCTGCGTCT....................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
.............................................................................................CTGGCCGTCTTCCTGCTCAGC..............................................................................................................................................................................................................................................................................................................2111.00100010000000000000
.........................................................................ACATCTTCTGGTCGGTCTCGC..................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
.......................................GTCTGCTCCAAACTGTGGTAC....................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
..........................................................................................TCGCTGGCCGTCTTCCTGCT..................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
...................................................................AGCGCAACATCTTCTGGTCGG........................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
....................................................................GCGCAACATCTTCTGGTCGGC.......................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................TACTTCCCCACGCGCTACTCCAAGAGC........2711.00100000001000000000
...........................................................................ATCTTCTGGTCGGTCTCGCTG................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
.........................TCATCGTACCCACCGTCTGCT..................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
droSec2
TTCCTCAGCTTCACGCAGGGCTGCGTCATCGTACCCACCGTCTGCTCCAAACTGTGGTACCACCGCCAGCGCAACATCTTCTGGTCGGTCTCGCTGGCCGTCTTCCTGCTCAGCATGTTCGATCCCGGCATGGTGGTAAGTTGG-------------------------ACAC-GTCTCTATTGCTCA--TGGG--------------------------------------------AATTGTTGTGATTTC---AC---CGTCATTTCAAAA----------------------------------------------------------------------------------------ACAGAACATTCACGAAGAGTACTTCCCCACGCGCTACTCCAAGAGCGGTGACGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................AACTGTGGTACCACCGCCA............................................................................................................................................................................................................................................................................................................................................................1911.0011000
.............................................................................CTTCTGGTCGGTCTCGCTGGC..............................................................................................................................................................................................................................................................................................................................2111.0010100
TTCCTCAGCTTCACGCAGGGCTGCGTCAC...................................................................................................................................................................................................................................................................................................................................................................................................2911.0011000
...................................................................................................................TGTTCGATCCCGGCATGGT..........................................................................................................................................................................................................................................................................................1911.0011000
dm3
TTCCTCAGCTTCACGCAGGGCTGCGTCATCGCACCCACCGTCTGCTCCAAACTGTGGTACCATCGCCAGCGCAACATCTTCTGGTCGGTCTCGCTGGCCGTCTTCCTGCTCAGCATGTTCGATCCGGGCATGGTGGTAAGTTGG-------------------------ATACCGCCTCTATTGCTCA--CGGG--------------------------------------------AATTGTTGTGATTTC---GT---CGCCCTCTCAAAA----------------------------------------------------------------------------------------ATAGAACATTCGCGAAGAGTACTTCCCCACGCGCTACTCCAAGAGCGGTGACGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................GCAACATCTTCTGGTCGGTCTCGC..................................................................................................................................................................................................................................................................................................................................24112.001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................AGCGCAACATCTTCTGGTCGGTCTCG...................................................................................................................................................................................................................................................................................................................................2617.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................AAACTGTGGTACCATCGCCAGCGCAAC.....................................................................................................................................................................................................................................................................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................GTTCGATCCGGGCATGGTGA........................................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........................................................................ATCTTCTGGTCGGTCTCGCTGGC..............................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..............................................................................TTCTGGTCGGTCTCGCTGGCCGTC..........................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000
....................................................................................................................GTTCGATCCGGGCATGGTGAA.......................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................GCGCAACATCTTCTGGTCGGT.......................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TCCTGCTCAGCATGTTCGATCCGGGC...............................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................GTTCGATCCGGGCATGGTG.........................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000
..............................................................................TTCTGGTCGGTCTCGCTGGCC.............................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000100000000
.......................................................................................................TCCTGCTCAGCATGTTCGA......................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TGTGGTACCATCGCCAGCGC........................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................GAACATTCGCGAAGAGTACT...............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................................AACATCTTCTGGTCGGTCTCGCTG................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CTGCGTCATCGCACCCACCGT.......................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......AGCTTCACGCAGGGCTGC........................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................CTGGTCGGTCTCGCTGGCCGTC..........................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................CACCGTCTGCTCCAAACTGT.........................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...................................................................AGCGCAACATCTTCTGGTCGG........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..................................................................................................................ATGTTCGATCCGGGCATGGT..........................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................TTCGATCCGGGCATGGTG.........................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................GCAACATCTTCTGGTCGGTCTCGCTGGC..............................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
............................................................................................................................................................................................................................................................C---GT---CGCCCTCTCAAAA----------------------------------------------------------------------------------------ATAG..................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GCTACTCCAAGAGCGGTGACG.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................GGCCGTCTTCCTGCTCAGCAT............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................TGCTCAGCATGTTCGATCCGGGCAT.............................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................TCTATTGCTCA--CGGG--------------------------------------------AATTGT............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................ACGCGCTACTCCAAGAGCGGTGAC..2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TTCCTCAGCTTCACGCAGGGCTGCGT......................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TCTTCTGGTCGGTCTCGCTGG...............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................GTACCATCGCCAGCGCAACA....................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................AGCGCAACATCTTCTGGTCG.........................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................AACTGTGGTACCATCGCCAGCGCAACATC..................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................CTCAGCATGTTCGATCCGGGC...............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................TTCTGGTCGGTCTCGCTGGC..............................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TGTTCGATCCGGGCATGGTGAA.......................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................AGTACTTCCCCACGCGCTACT................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................ACATCTTCTGGTCGGTCTC....................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........................................................CCATCGCCAGCGCAACATCTT................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..............................................CCAAACTGTGGTACCATCG...............................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
...............................................................................TCTGGTCGGTCTCGCTGG...............................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..........................................................................................................................................................................................................................................................................................................................................................................ATAGAACATTCGCGAAGAG...................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
........................................................................AACATCTTCTGGTCGGTCT.....................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..........................................TGCTCCAAACTGTGGTACCATCGCC.............................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................CAGCATGTTCGATCCGGGCATGGTGGT.......................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................CTTCTGGTCGGTCTCGCTGGC..............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................GCTCA--CGGG--------------------------------------------AATTGTTGTGA.......................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TGTGGTACCATCGCCAGCGCA.......................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................CGCCTCTATTGCTCA--CGGG--------------------------------------------AA................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................ACATCTTCTGGTCGGTCTCGCTGGCCGTC..........................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................ACATTCGCGAAGAGTACTTCCCC..........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................................................AACATCTTCTGGTCGGTCTCGCTGG...............................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TCGCCAGCGCAACATCTTCT..............................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................CCGTCTGCTCCAAACTGTGGTACC...................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................GTCTGCTCCAAACTGTGGTACCATCGC..............................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AGGGCTGCGTCATCGCACCCACCGTC......................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................ATCTTCTGGTCGGTCTCGCTGGCCGTC..........................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................GTTCGATCCGGGCATGGT..........................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................TCCCCACGCGCTACTCCAAGAGCGGT.....2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................CATGTTCGATCCGGGCATGGT..........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................TTCGATCCGGGCATGGTGA........................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................AGCGCAACATCTTCTGGTCGGATC.....................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................CATTCGCGAAGAGTACTTCCCCACGCG.....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AGCTTCACGCAGGGCTGCGTCA....................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................CACGCGCTACTCCAAGAG.........1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................GCTCAGCATGTTCGATCCGGGCA..............................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................GTGGTACCATCGCCAGCGCAACAT...................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TGTTCGATCCGGGCATGGTGG........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................CAACATCTTCTGGTCGGTCTCGC..................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................TACTTCCCCACGCGCTC..................1720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................TTGG-------------------------ATACCGCCTCTAAC.........................................................................................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................TTCGATCCGGGCATGGTGAAC......................................................................................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TTCCTCAGCTTTACGCAGGGCTGCGTCATCGCACCAACCGTCTGCTCCAAAGTGTGGTACCACCGCCAGCGCAACATCTTCTGGTCGGTCTCGCTGGCCGTCTTCCTGCTCAGCATGTTCGATCCAGGAATGGTGGTAAGTTGT-------------------------ATTC-GCCACTATTTGTCA--CTGG--------------------------------------------AATAATTGTGTTTTC---GT---CGCCCATTCATA-----------------------------------------------------------------------------------------ACAGAACATTCGCGAAGAGTACTTCCCCACGCGCTACTCCAAGAGCGGCGACGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................GTTCGATCCAGGAATGGTGAA.......................................................................................................................................................................................................................................................................................2113.0030000210
................................ACCAACCGTCTGCTCCAAAGT...........................................................................................................................................................................................................................................................................................................................................................................2112.0020000200
......................................CGTCTGCTCCAAAGTGTGGT......................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
..........................................................................................................TGCTCAGCATGTTCGATCCAGG................................................................................................................................................................................................................................................................................................2211.0011000000
.......................................................GGTACCACCGCCAGCGCAACATCTTCT..............................................................................................................................................................................................................................................................................................................................................2711.0011000000
.......................CGTCATCGCACCAACCGTCTG....................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
..........................................................................CATCTTCTGGTCGGTCTCGCT.................................................................................................................................................................................................................................................................................................................................2111.0010000010
................................................................................................................GCATGTTCGATCCAGGAATGGTG.........................................................................................................................................................................................................................................................................................2311.0010000010
......................................................................GCAACATCTTCTGGTCGGT.......................................................................................................................................................................................................................................................................................................................................1911.0010000010
................................................................................................................................................................................................................................................................................................................................................................................................TTCCCCACGCGCTACTCCAAGAGC........2411.0010000010
...................................................................................................................................................................................................................................................................................................................................................................................................CCCACGCGCTACTCCAAGAG.........2011.0010000010
....................................ACCGTCTGCTCCAAAGTGTGG.......................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
....................................................................................................................GTTCGATCCAGGAATGGTGAAC......................................................................................................................................................................................................................................................................................2220.5011000000
droYak3
TTCCTCAGCTTTACGCAGGGCTGCGTCATCGCACCCACTGTCTGCTCCAAAGTGTGGTACCATCGCCAGCGCAACATCTTCTGGTCGGTCTCGCTGGCCGTCTTCCTGCTCAGCATGTTCGATCCGGGAATGGTGGTAAGTTGG-------------------------ATGT-GCCTCTATTCGTCA--TTGG--------------------------------------------AATTATTGTAATTTC---GT---TGCCCTTTCATA-----------------------------------------------------------------------------------------AAAGAACATTCGCGAAGAGTACTTCCCCACGCGCTACTCCAAGAGCGGTGACGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................CAACATCTTCTGGTCGGTCTCGCT.................................................................................................................................................................................................................................................................................................................................2412.00200000020000
...............................................................................................................AGCATGTTCGATCCGGGAATG............................................................................................................................................................................................................................................................................................2111.00100000010000
..................................CCACTGTCTGCTCCAAAGT...........................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000
...........................................GCTCCAAAGTGTGGTACCAT.................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
...CTCAGCTTTACGCAGGGCTGCGTCAT...................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000100000
............................................................................................................................................................................................................................................................................................................................................................................................................TACTCCAAGAGCGGTGACGA2011.00101000000000
...........................ATCGCACCCACTGTCTGCTCC................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
...........................................................................................................................CCGGGAATGGTGGTAAGTTGG-------------------------.......................................................................................................................................................................................................................................................2111.00101000000000
................................................AAAGTGTGGTACCATCGCCAGCGC........................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.......................................................................CAACATCTTCTGGTCGGTCTCGCTGGCCGT...........................................................................................................................................................................................................................................................................................................................3011.00100000010000
.....................................................................................................CTTCCTGCTCAGCATGTTCGATCCGG.................................................................................................................................................................................................................................................................................................2611.00100001000000
......AGCTTTACGCAGGGCTGCGT......................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
.....................................................................................................CTTCCTGCTCAGCATGTTCGATCCGGGA...............................................................................................................................................................................................................................................................................................2811.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................CTTCCCCACGCGCTACTCCAAGAGC........2511.00101000000000
....................................................................................................................GTTCGATCCGGGAATGGTG.........................................................................................................................................................................................................................................................................................1911.00101000000000
...........TACGCAGGGCTGCGTCATCGC................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000100000
........................GTCATCGCACCCACTGTCTGCT..................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
................................................................................................................GCATGTTCGATCCGGGAATGGT..........................................................................................................................................................................................................................................................................................2211.00100000010000
........................GTCATCGCACCCACTGTCTGCTCCAA..............................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
...........................................................................................................GCTCAGCATGTTCGATCCGGGAATGGT..........................................................................................................................................................................................................................................................................................2711.00100000010000
.....................................................................................CGGTCTCGCTGGCCGTCTTCC......................................................................................................................................................................................................................................................................................................................2111.00101000000000
...............................................................................................................AGCATGTTCGATCCGGGAAT.............................................................................................................................................................................................................................................................................................2011.00100000010000
................................................................................................................GCATGTTCGATCCGGGAATGGTGA........................................................................................................................................................................................................................................................................................2411.00101000000000
..CCTCAGCTTTACGCAGGGCTGCGT......................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................TTCCCCACGCGCTACTCCAAGAGC........2411.00101000000000
.............................................................................CTTCTGGTCGGTCTCGCTGGCCGT...........................................................................................................................................................................................................................................................................................................................2411.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................CATTCGCGAAGAGTACTTCC............................2011.00100000100000
..............................................................................................................................................................................................................................................................................................................................................................................................ACTTCCCCACGCGCTACTCCAAGAGC........2611.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................CTTCCCCACGCGCTACTCCAA............2111.00101000000000
...............................................................................................................AGCATGTTCGATCCGGGAATGGTGA........................................................................................................................................................................................................................................................................................2511.00100000010000
...........................................................CCATCGCCAGCGCAACATCTT................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................GTACTTCCCCACGCGCTACT................2011.00101000000000
............................................................................................GCTGGCCGTCTTCCTGCTCAGC..............................................................................................................................................................................................................................................................................................................2211.00101000000000
.....................................................................................................................TTCGATCCGGGAATGGTGAA.......................................................................................................................................................................................................................................................................................2011.00100000010000
......................................................................................................................TCGATCCGGGAATGGTGAAC......................................................................................................................................................................................................................................................................................2070.14100000010000
droEug1
TTCCTCAGCTTTACGCAGGGCTGCGTCATTGCGCCAACTATCTGCTCTAAAGTGTGGTATCATCGCCAGCGCAATATCTTCTGGTCGGTCTCGCTGGCCGTCTTCCTGCTCAGCATGTTCGATCCGGGCATGGTGGTAAGTTGA-------------------------ACTT-TGCTCTGCTT---TTTTGAGAAACCCTAA-----------------------------------AATGATTGTGATTTC---CT---TTTT---------------------------------------------------------------------------------------------CTGTGAAGAACATTCGCGAGGAGTACTTCCCCACGCGCTACAGCCAAAGCGGCGATGASizeHit CountTotal NormTotal
No Reads
droBia1
TTCCTCAGCTTCACGCAGGGCTGCGTCATTGCGCCCACTGTCTGCTCCAAGGTGTGGTACCACCGCCAGCGCAACATCTTCTGGTCGGTCTCTCTGGCCGTCTTCCTGCTCAGCATGTTTGACCCGGGCATGGTGGTAAGTTGG-------------------------ATGT-GGCTCCATTTGGCC--CTGC--------------------------------------------TCTAATTGTGGCCT-----------TCCACTC----------------------------------------------------------------------------------------CCGCACAGAACATTCGCGAGGAGTACTTCCCCACGCGCTACTCCCAGAGCAGCGACGASizeHit CountTotal NormTotal
No Reads
droTak1
TTCCTCAGCTTCACGCAGGGCTGCGTGATAGCGCCCACCGTTTGCTCCAAAGTGTGGTATCACCGCCAGCGAAACATCTTCTGGTCGGTCTCGCTGGCCGTCTTCCTGCTCAGCATGTTTGATCCGGGAATGGTGGTAAGATGA-------------------------AC-----CTATAAAGCTTA--AGA-----------------------------TTCAATG---------AATTATTTTGAATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TTCCTCAGCTTCACGCAGGGCTGCGTGATTGCGCCCACCATCTGCTCGAAGGTGTGGTACCACCGCCAGCGCAACATCTTCTGGTCCGTCTCGCTGGCCGTCTTCCTGCTCAGCATGTTCGATCCGGGCATGGTGGTAAGTTCT--G------------A--------------------------------------------------------------TCCAATG---------CCTTATG-CT-----ATA------------------TATATGCCTGTGCTTATGTTATGTACTCCTTCAT-------------------------------------------------CCCATCAAGAACATACGCGAGGAGTACTTCCCCACGCGATACACCCAGAGCGGCGACGASizeHit CountTotal NormTotal
No Reads
droRho1
TTCCTCAGCTTCACGCAGGGCTGCGTCATTGCGCCCACTATTTGCTCCAAGGTGTGGTATCACCGCCAGCGCAACATCTTCTGGTCCGTCTCGCTGGCCGTCTTCCTGCTCAGCATGTTCGATCCCGGCATGGTGGTAAGTTGG-------------------------ATTT-CGCCTTATGTGCCA--CCCA--------------------------------------------AATGATTGTGTTTT----GT---GATCC--------------------------------------------------------------------------------------------CTGCAAAGAACATTCGCGAGGAGTACTTCCCCACGCGCTACACCCAGAGCGGCGACGASizeHit CountTotal NormTotal
No Reads
droFic1
TTCCTCAGCTTCACGCAGGGCTGTGTCATTGCGCCGACGATCTGCTCGAAGGTGTGGTACCATCGCCAGCGCAACATCTTCTGGTCGGTCTCGCTGGCCGTCTTCCTGCTCAGCATGTTCGATCCGGGCATGGTGGTAAGTTGA-------------------------ACTT-TGCCCTGCTT---GCTC----------------CAC---------TGCTCCAATGCTCC-----AATGATTGTGTTGTT---CTTGCGAC--TCC----------------------------------------------------------------------------------------CCCGTTAAGAACATTCGCGAGGAGTACTTCCCCACGCGGTACACCCAGAGTGGCGACGASizeHit CountTotal NormTotal
No Reads
droKik1
TTCCTCAGCTTTACCCAGGGCTGCGTCATTGCGCCCACAGTGTGCTCCAAGGTGTGGTACCACCGGCAGCGCAACATCTTCTGGTCGGTCTCCCTGGCCGTCTTCCTGCTGAGCATGTTTGATCCGGGCATGGTGGTGAGTTGA-------------------------CCTT-----CTGTTT---TT-----AAGCCCTCAAACTAAGCGCTCATACT------------------AGTCATC-----------CT---AATC---------------------------------------------------------------------------------------------CTTTCCAGAACATTCGCGAGGAGTATCTTCCCACGCGTCAC------AATGCCGACGASizeHit CountTotal NormTotal
No Reads
droAna3
TTCCTGAGCTTCACCCAGGGCTGCGTCATAGCGCCCACCATCTGCTCGAAGGTGTGGTACCATCGCCAGCGCAACATCTTCTGGTCTGTCTCGCTGGCCGTCTTCCTCCTCAGCATGTTTGATCCAGGAATGGTGGTAGGTTAT-------------------------CCA--------------------------------------------------------------------------T------------------ATTTCAAAATATATCCC-----------------------CATTCCAC------------------------TAC---TACGCCGTACTT----CTCGTAGAACATCCGCGAGGAATACTTCCCCACCAGATACTCCCAAAGCCCTGATGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................GCATGTTTGATCCAGGAATGGT..........................................................................................................................................................................................................................................................................................2212.002000020
................................................................................................................GCATGTTTGATCCAGGAATGGTGAAC......................................................................................................................................................................................................................................................................................2611.001000010
....................................................................................................................GTTTGATCCAGGAATGGTGAA.......................................................................................................................................................................................................................................................................................2111.001000010
.....GAGCTTCACCCAGGGCTGCGTC.....................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
................................................................................................GCCGTCTTCCTCCTCAGCATGT..........................................................................................................................................................................................................................................................................................................2211.001100000
................................GCCCACCATCTGCTCGAAGGT...........................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droBip1
TTCCTGAGCTTCACCCAGGGCTGCGTTATAGCGCCCACCATCTGCTCGAAGGTGTGGTATCACCGCCAGCGTAACATCTTCTGGTCTGTCTCGCTGGCCGTCTTCCTCCTCAGCATGTTTGATCCTGGAATGGTGGTAAGGTTA--------------------------------------------------------------------------------------------------TACATA------------------TTTCATAACAAATCCT-----------------------CAATCCCC------------------------AACGAT------G--TATGC-CTATCTAGAACATCCGCGAGGAATACTTCCCTACCAGATACTCCCAAAGCCCCGATGASizeHit CountTotal NormTotal
No Reads
dp5
TTCCTCAGCTTCACCCAGGGCTGTGTGATAGCCCCCACCATATGCTCCAAGGTGTGGTACCATCGCCAGCGGAACATCTTCTGGTCCGTCTCGCTGGCCGTCTTCCTTCTCAGCATGTTCGATCCGGGAATGGTGGTGAGTACA--GCTTCTCCCCTCGAGC---------------------------------------------CAG---------TACCTCTCTGTCCCAACCAA--TATA-CA-----ATA--------------------------------------------------------------------------------------------TTTTCATGT-GTATGCAGAACATCCGCGAGGAATACTTCCCTACGAAATATGAGCACAACGCTGACGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................CTTCTGGTCCGTCTCGCTGGC..............................................................................................................................................................................................................................................................................................................................2111.0010100000000
droPer2
TTCCTCAGCTTCACCCAGGGCTGTGTGATAGCCCCCACCATATGCTCCAAGGTGTGGTACCATCGCCAGCGGAACATCTTCTGGTCCGTCTCGCTGGCCGTCTTCCTTCTCAGCATGTTCGATCCGGGAATGGTGGTGAGTACA--GCTCCTCCCCTCGAGC---------------------------------------------CAG---------TACCTCTCTGTCCCAACCAT-TTATA-CA-----ATA--------------------------------------------------------------------------------------------TTTTCATGT-GTATGCAGAACATCCGCGAGGAATACTTCCCTACGAAATATGAGCACAACGCTGACGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................ATCGCCAGCGGAACATCTTCT..............................................................................................................................................................................................................................................................................................................................................2111.001000010
droWil2
TTCCTTAGCTTTACTCAGGGTTGTGTTATAGCTCCAACTGTATGCTCCAAAGTCTGGTATCATCGACAGCGCAATATCTTTTGGTCTGTCTCCTTGGCCGTCTTCTTACTCAGCATGTTTGATCCCGGCATGGTGGTAATTTCT------------TTGAGT---------------------------------------------------------------------------------------------------------TCTAACGATAC-----------------------------------TCTACTTTCCATTGACTCCTCATT------TTTGGTTTCTTT----TTATCAGAACATACGTGAAGAATACTTTCCAACACGTTATACCCAAAATACAGACGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................TCTTACTCAGCATGTTTGATCCCGGCA..............................................................................................................................................................................................................................................................................................2716.00606000
...........TACTCAGGGTTGTGTTATAGCTCCAAC..........................................................................................................................................................................................................................................................................................................................................................................................2714.00404000
......................................................................................................TTCTTACTCAGCATGTTTGATCCCGGCA..............................................................................................................................................................................................................................................................................................2813.00303000
........................................................................................................CTTACTCAGCATGTTTGATCCCGGC...............................................................................................................................................................................................................................................................................................2512.00220000
................................TCCAACTGTATGCTCCAAAGTCTGG.......................................................................................................................................................................................................................................................................................................................................................................2512.00202000
.........................................................TATCATCGACAGCGCAATATCTTTTGG............................................................................................................................................................................................................................................................................................................................................2712.00202000
........................GTTATAGCTCCAACTGTATGCTCCAAA.............................................................................................................................................................................................................................................................................................................................................................................2712.00202000
.................................................................ACAGCGCAATATCTTTTGGTCTGTCTCCT..................................................................................................................................................................................................................................................................................................................................2912.00202000
TTCCTTAGCTTTACTCAGGGTTGTGT......................................................................................................................................................................................................................................................................................................................................................................................................2612.00202000
.........................................................TATCATCGACAGCGCAATATCTTTTGGTC..........................................................................................................................................................................................................................................................................................................................................2911.00101000
............................TAGCTCCAACTGTATGCTCCA...............................................................................................................................................................................................................................................................................................................................................................................2111.00101000
........................................................................................................CTTACTCAGCATGTTTGATCCCGG................................................................................................................................................................................................................................................................................................2411.00101000
..........................................................................................TCCTTGGCCGTCTTCTTACTCAGCATG...........................................................................................................................................................................................................................................................................................................2711.00101000
...............................................CAAAGTCTGGTATCATCGACAGCGCA.......................................................................................................................................................................................................................................................................................................................................................2611.00101000
..........................TATAGCTCCAACTGTATGCTCCAAAGTC..........................................................................................................................................................................................................................................................................................................................................................................2811.00101000
............................TAGCTCCAACTGTATGCTCCAAAGTCTGG.......................................................................................................................................................................................................................................................................................................................................................................2911.00101000
..........................................................................................................TACTCAGCATGTTTGATCCCGGCATGGT..........................................................................................................................................................................................................................................................................................2811.00101000
.....................................................................CGCAATATCTTTTGGTCTGTCTCCTTGGC..............................................................................................................................................................................................................................................................................................................................2911.00101000
..........................................................................TATCTTTTGGTCTGTCTCCTTGGCCGT...........................................................................................................................................................................................................................................................................................................................2711.00101000
........................................................................AATATCTTTTGGTCTGTCTCCTTGGCCGT...........................................................................................................................................................................................................................................................................................................................2911.00100100
............................................................................................CTTGGCCGTCTTCTTACTCAGCATG...........................................................................................................................................................................................................................................................................................................2511.00101000
...................................................GTCTGGTATCATCGACAGCGCA.......................................................................................................................................................................................................................................................................................................................................................2211.00101000
.....................................................................CGCAATATCTTTTGGTCTGTCTCCT..................................................................................................................................................................................................................................................................................................................................2511.00101000
.........................................................................................................TTACTCAGCATGTTTGATCCCGGC...............................................................................................................................................................................................................................................................................................2411.00110000
.......................................................................................GTCTCCTTGGCCGTCTTCTTACTCAGCA.............................................................................................................................................................................................................................................................................................................2811.00101000
............................................................CATCGACAGCGCAATATCTTTTGGTC..........................................................................................................................................................................................................................................................................................................................................2611.00100100
.................................CCAACTGTATGCTCCAAAGTCTGG.......................................................................................................................................................................................................................................................................................................................................................................2411.00101000
.....TAGCTTTACTCAGGGTTGTGTTA....................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
......................................................TGGTATCATCGACAGCGCAATATCTTT...............................................................................................................................................................................................................................................................................................................................................2711.00101000
............ACTCAGGGTTGTGTTATAGCTCCAAC..........................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
.........TTTACTCAGGGTTGTGTTATAGCTCCA............................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
...................................................................................................................TGTTTGATCCCGGCATGGT..........................................................................................................................................................................................................................................................................................1911.00100100
........................................................................................TCTCCTTGGCCGTCTTCTTACTCAGCA.............................................................................................................................................................................................................................................................................................................2711.00101000
.................................................................................TGGTCTGTCTCCTTGGCCGTCTTCT......................................................................................................................................................................................................................................................................................................................2511.00101000
....................................................................................................................................GTGGTAATTTCT------------TTGAGT---------------------------------------------------------------------------------------------------------TCT..................................................................................................................................................2111.00101000
.......................................................................................................................................................................................................................................................................................................................................................................................GAAGAATACTTTCCAACACGT....................2111.00100010
..........................TATAGCTCCAACTGTATGCTCCAAAG............................................................................................................................................................................................................................................................................................................................................................................2611.00101000
...........................................................TCATCGACAGCGCAATATCTTTTGGTC..........................................................................................................................................................................................................................................................................................................................................2711.00101000
............................................................................TCTTTTGGTCTGTCTCCTTG................................................................................................................................................................................................................................................................................................................................2011.00100010
..............................GCTCCAACTGTATGCTCCAAAGTCTGG.......................................................................................................................................................................................................................................................................................................................................................................2711.00101000
.TCCTTAGCTTTACTCAGGGTTGTGT......................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
droVir3
TTTCTTAGCTTCACTCAGGGCTGTGTGATAGCGCCGACGGTATGCTCGAAGATCTGGTACCATCGTCAACGCAACATCTTTTGGTCCGTTTCGCTAGCCGTCTTTTTGCTCAGCATGTTTGATCCCGGCATGGTGGTCAGTATA--G------------AATTAGTTGGCCAT-TTGTTT-------A--CT------------------------------------------------TAACTATA------------------TTTCATAAT-----------------------------------------------------------------------------------ATTTGCAGAACATACGTGAGGAATACTTTCCCACACGCTATACACAATCATCGGATGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................ATGCTCGAAGATCTGGTACCATC................................................................................................................................................................................................................................................................................................................................................................2312.002000000000000000000002000000000000000000000000000000000000000000
....................................................................................................................GTTTGATCCCGGCATGGTG.........................................................................................................................................................................................................................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
..........TCACTCAGGGCTGTGTGATAGCGCC.............................................................................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................ACGCTATACACAATCATCGGAT..2211.001000000000000000000000000000000000001000000000000000000000000000
..............................................................................................................CAGCATGTTTGATCCCGGG...............................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
................................................AAGATCTGGTACCATCGT..............................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................CCACACGCTATACACAATCA........2011.001000000000000000000000010000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................ATACTTTCCCACACGCTATACACAATC.........2711.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................CTCAGCATGTTTGATCCCGGC...............................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.............CTCAGGGCTGTGTGATAGC................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000010000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................GAACATACGTGAGGAATACTTTC............................2311.001000000000000000000000000000001000000000000000000000000000000000
..................................................................CAACGCAACATCTTTTGGTCCGTTTCGCT.................................................................................................................................................................................................................................................................................................................................2911.001000000000000000010000000000000000000000000000000000000000000000
...........................................GCTCGAAGATCTGGTACC...................................................................................................................................................................................................................................................................................................................................................................1811.001000000000100000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................ATACTTTCCCACACGCTATACACA............2411.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................ATGTTTGATCCCGGCATGGTG.........................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...................GCTGTGTGATAGCGCCGACGG........................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
....................................................................................TCCGTTTCGCTAGCCGTCTTT.......................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
TTTCTCAGCTTCACGCAGGGCTGTGTGATAGCGCCGACGGTCTGTTCCAAGATCTGGTATCATCGTCAGCGCAACGTCTTCTGGTCCGTCTCGCTGGCCGTCTTCCTGCTCAGCATGTTCGATCCCGGCATGGTGGTTAGCTGACAATCTCTCTCTCTCTCT---------------------------------------------C-------------TCTCTCTCTCTCTCTCGT-TTATA-TA------------------TTTATTGAC--------------------------------------------------------------TTCAGT------G--AATTC-ATTTGTAGAATATACGCGAGGAGTACTTTCCCACACGCTACAACCAGCCAACGGATGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................GTTCGATCCCGGCATGGT..........................................................................................................................................................................................................................................................................................1811.001100000
...............................................CAAGATCTGGTATCATCGTCAGC..........................................................................................................................................................................................................................................................................................................................................................2311.001000001
....................................................................................................................GTTCGATCCCGGCATGGTGA........................................................................................................................................................................................................................................................................................2011.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................CACACGCTACAACCAGCCAACGG....2311.001000001
...........................ATAGCGCCGACGGTCTGTTCC................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.............CGCAGGGCTGTGTGATAGCGCCGAC..........................................................................................................................................................................................................................................................................................................................................................................................2511.001001000
....................................................................................................................................................................................................................................................................................................................................................................................CGCGAGGAGTACTTTCCCACACG.....................2311.001100000
....................................................................................................................GTTCGATCCCGGCATGGTGAA.......................................................................................................................................................................................................................................................................................2111.001100000
...............................................CAAGATCTGGTATCATCGTCA............................................................................................................................................................................................................................................................................................................................................................2111.001100000
......AGCTTCACGCAGGGCTGTGT......................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
droGri2
TTTCTCAGCTTCACTCAGGGCTGTGTTATAGCGCCCACGGTATGCTCAAAGATTTGGTACCATCGACAACGCAATATCTTTTGGTCTGTCTCTCTGGCCGTCTTCATGCTTAGCATGTTTGATCCGGGCATGGTTGTAAGTGAA--AACT-----CTTGA---------ACA-----------------------------------CAG---------TAC-------------------------------------------------------------------------------------------TGTACACTCTATTTGCAATCCATA------TATACTTTCCAC----TTTGCAGAACATACGTGAGGAGTATTTTCCCACACGCCACACCCAACCGTCAGATGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 04:02 PM