ID:

dsi_2204

 Coordinate:

2r:17772929-17773078 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.5 -12.5 -12.2

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

GTGTCACATTAAAACTAGCTTCGTGTGATGACAATTTGTTAGTTTGCCAGATCAAAGAGATGCGTCTTATCCATGTGGCTAAGTTCTTACCAATTTATTCACATTGAAAACGCCCCTAACATGACCCTCTTATTTAAGTTATCCGTATTTTCAAACTAAATGCGCAGTAATTAGAATTTGGCTTTTGTTTTTCCGTACAGGTGATTCGTCCGTTTCTACTTCGACGCCTTAAAAAGGAGGTGGAAAAACA
*********************************************************((..((((....((.((((((.((((((......)))))).)))))).))..))))..)).......****************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M053
female body
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 O002
Head
 SRR553488
RT_0-2 hours eggs
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
...........................................TTGCCAGATCAAAGAGATG............................................................................................................................................................................................ 19 0 1 28.00 28 25 0 1 0 0 2 0 0 0 0 0 0
...........................................TTGCCAGATCAAAGAGATGCGTC........................................................................................................................................................................................ 23 0 1 8.00 8 0 0 7 0 0 1 0 0 0 0 0 0
...........................................TTGCCAGATCAAAGAGAT............................................................................................................................................................................................. 18 0 1 7.00 7 6 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................ATTGAAAACGCCCCTAACATGA.............................................................................................................................. 22 0 1 4.00 4 0 1 0 0 3 0 0 0 0 0 0 0
...........................................TTGCCAGATCAAAGAGATGCGT......................................................................................................................................................................................... 22 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0
.............................................GCCAGATCAAAGAGA.............................................................................................................................................................................................. 15 0 1 3.00 3 0 0 0 3 0 0 0 0 0 0 0 0
.........................................................AGATGCGTCTTATCCATGTGGCT.......................................................................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.............................................GCCAGATCAAGGAGATGCGTCTTAT.................................................................................................................................................................................... 25 1 1 2.00 2 0 0 0 0 0 0 0 0 0 0 2 0
...........................................TTGCCAGATCAAAGAGATGC........................................................................................................................................................................................... 20 0 1 2.00 2 0 1 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................................ATTCGTCCGTTTCTACTTCGAC......................... 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...........................................TTGCCAGATCAAAGAGATGCGTCTTAT.................................................................................................................................................................................... 27 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
...........................................TTGCCAGATCAAAGAGATGCG.......................................................................................................................................................................................... 21 0 1 2.00 2 0 0 0 0 0 0 0 0 2 0 0 0
............................................TGCCAGATCAAAGAGATGCGTCC....................................................................................................................................................................................... 23 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.............................................GCCAGATCAAAGAGATGCG.......................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..........................................TTTGCCAGATCAAGGAGATGCGTCTTA..................................................................................................................................................................................... 27 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
......CATTAAAACTAGCTTCGTGTGATGAC.......................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
....................TCGTGTGATGACAATTTGT................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................TCACATTGAAAACGCCCCTAACATGA.............................................................................................................................. 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................TTTGGCTTTTGTTTCTACGTACAGG................................................. 25 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
...............TAGCTTCGTGTGATGACAATTTGT................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................GATGACAATTTGTTAGTTTGCCAGATC..................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................CGTCTTATCCATGTGGCTAAGT...................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..GTCACATTAAAACTAGCTTCGTGT................................................................................................................................................................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................GCCTTAAAAAGGAGGT......... 16 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................CATTGAAAACGCCCCTAACATGA.............................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................CATGTGGCTAAGTTCTTAC................................................................................................................................................................ 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...........AAACTAGCTTCGTGTGATGA........................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...............TAGCTTCGTGTGATGACA......................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................TGATGACAATTTGTTAGTTTGCCAGA....................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
.....................................................................................................................AACATGACCCTCTTATTTAAGTT.............................................................................................................. 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................TGCCAGATCAAGGAGATGCGTCTTA..................................................................................................................................................................................... 25 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................GCCAGATCAAAGAGAT............................................................................................................................................................................................. 16 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.........TAAAACTAGCTTCGTGTGATGACA......................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................ATTTGTTAGTTTGCCAGA....................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................ATTGAAAACGCCCCTAACATGAC............................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................................AAAACGCCCCTAACATGA.............................................................................................................................. 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................ATTCACATTGAAAACGCCCCTAACATGA.............................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................GCCAGATCAAAGAGATG............................................................................................................................................................................................ 17 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................ATGTGGCTAAGTTCTTACC............................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................CTTAAAAAGGAGGTGGAA..... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................TTTGTTAGTTTGCCAGATCAAAGAGAT............................................................................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............ACTAGCTTCGTGTGATGACA......................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
......CATTAAAACTAGCTTCGTGT................................................................................................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......CATTAAAACTAGCTTCGT.................................................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
......................................................AAGAGATGCGTCTTATCCATGTGGC........................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................TGAAAACGCCCCTAACATGA.............................................................................................................................. 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GATTCGTCCGTTTCTACTTCGAC......................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....CACATTAAAACTAGCTTCGTGT................................................................................................................................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................TTTGCCAGATCAAAGAGATGCGTCTTA..................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................CAATTTGTTAGTTTGCCAGATCAAGGAGA.............................................................................................................................................................................................. 29 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCTACTTCGTCGCCTTAAAAAGGAG........... 26 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
........................................AGTTTGCCAGATCAAAGAGAT............................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................GTTCTTACCAATTTATTCACATCGAA.............................................................................................................................................. 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.TGTCACATTAAAACTAGCTTCGT.................................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................TTAGTTTGCCAGATCAAGGAGATG............................................................................................................................................................................................ 24 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
..........................................TTTGCCAGATCAAAGAGATG............................................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................AAGGTGATTCGTCCGTTCCTACTTCGA.......................... 27 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
....................................................CAAAGAGATGCGTCTTATCCATGTGGCG.......................................................................................................................................................................... 28 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.............ACTAGCTTCGTGTGATGAC.......................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................CAAAGAGATGCGTCTTATCCATGTGG............................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
....................................TGTTAATTTGCCAGATCAAGGAGA.............................................................................................................................................................................................. 24 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
...TCACATTAAAACTAGCTTCGTGT................................................................................................................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................CGTCGGTTTAAACTTCGA.......................... 18 3 20 0.90 18 0 18 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................AATTAGAATTTGGCTTTCGTT............................................................. 21 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 1
.....................................................AGAGAGATGCGTCTTCTCCTT................................................................................................................................................................................ 21 3 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................ACTCCTTAGAAAGGAGGTGA....... 20 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 1
............AACTAGCTTCGTGTA............................................................................................................................................................................................................................... 15 1 6 0.17 1 0 0 0 0 0 0 0 1 0 0 0 0
..........................................TTTGCCGGATCAAGGAGA.............................................................................................................................................................................................. 18 2 10 0.10 1 0 0 0 1 0 0 0 0 0 0 0 0
..................................ATTGTTAATTCGCCAGATC..................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0
.......................................TAATTCGCCAGATCAAA.................................................................................................................................................................................................. 17 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

CACAGTGTAATTTTGATCGAAGCACACTACTGTTAAACAATCAAACGGTCTAGTTTCTCTACGCAGAATAGGTACACCGATTCAAGAATGGTTAAATAAGTGTAACTTTTGCGGGGATTGTACTGGGAGAATAAATTCAATAGGCATAAAAGTTTGATTTACGCGTCATTAATCTTAAACCGAAAACAAAAAGGCATGTCCACTAAGCAGGCAAAGATGAAGCTGCGGAATTTTTCCTCCACCTTTTTGT
******************************************************************************************************************************((..((((....((.((((((.((((((......)))))).)))))).))..))))..)).......********************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 M053
female body
 SRR618934
dsim w501 ovaries
..................................................................................................................................................................................................................................GGAATCTTTCCTCCAC........ 16 1 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................................................GGAATCTTTCCTCCA......... 15 1 2 0.50 1 1 0 0 0 0
...................................................................................................................................................................................................................................GAATCTTTCCTCCAC........ 15 1 3 0.33 1 1 0 0 0 0
..................................................................................CAAGAATGGGTAAATA........................................................................................................................................................ 16 1 5 0.20 1 0 1 0 0 0
.................................................................................................................................................................................................................................AGGAATCTTTCCTCCAC........ 17 2 11 0.09 1 1 0 0 0 0
..............................................GGACTAGTTTCTCGACGAAG........................................................................................................................................................................................ 20 3 12 0.08 1 0 0 1 0 0
...........................................................................................................................................................................................................TAATCAGGCAACGAAGAAG............................ 19 3 16 0.06 1 0 1 0 0 0
...............................................................................................................................................................................................................................TAAGGAATCTTTCCTCCAC........ 19 3 16 0.06 1 0 0 0 1 0
......................................................TTTTCCACGCAGAACAGGTA................................................................................................................................................................................ 20 3 18 0.06 1 0 1 0 0 0
.............................................................................CAATTCAAGAATGGGTA............................................................................................................................................................ 17 2 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:17772879-17773128 + dsi_2204 GTGTCACATTAAAAC-------T-AGCTTCGTGTGATGACAATTTGTTAG-TTTGCCAGATCAAA------GAGATGCGTCTTATCCATGTGGCTAAGTT----CTTACCAATTTATTCACATTGAAAACGCCCCTAACATGACCCTCTTATT--TA-AG------------------TTA-TCCG--TATTTTCAAA------CT-A----AAT-G--CGCAGTAATTAG---------AAT----T---TGGCTTTTGTTTT--TCCGTACAGGTGATTCGTCCGTTTCTACTTCGACGCCTTAAAAAGGAGGTGGAAAAACA
droSec2 scaffold_9:549827-550076 + dse_1613 GTGTCACATTAAAAC-------T-AGCTTCGTGTGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGCTAAGTT----CTTACCAATTTGTTCACATTGAAAACGCCCCTAACATGACCCTCTTATT--TA-AG------------------TTA-TTCG--TATTTTCAAA------CT-A----AAT-G--CGAAGTAATTAG---------AAT----T---TTGCTTTTGTTTC--TCCGTAAAGGTGATTCGTCCGTTCCTACTTCGACGCCTTAAAAAGGAGGTGGAAAAACA
dm3 chr2R:17218425-17218674 + GTGTCACATTAAAAC-------T-AGCTTCGTGTGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGCTGAGTT----CTTACCAATTTATTCACATTGAAAACGCCCCTAACATGACCCTCTTATT--TA-AG------------------TTA-TCCT--TATTTTCAAA------AT-A----AAT-G--CGCAGTAATTAG---------AAT----T---TGGCTTTTGTTTC--TCCGTACAGGTGATTCGTCCGTTCCTACTTCGACGCCTCAAAAAGGAGGTGGAAAAACA
droEre2 scaffold_4845:11362226-11362474 + der_1105 GTGTCACATTAAAAC-------T-AGCTTCGTGTGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGTCATGTT----CTT-CCAATTTGTTCACATTGAATACGCCCCTAACATGACCCTCCTATT-TTA-AG------------------TTA-TCCG--TTATTTCAAA------CT-A----TAT-G--CGCAGTAATTAG---------AAT--------TTGCGTTTGTTTC--TCCGTACAGGTGATTCGTCCGTTCTTACTTCGACGCCTCAAGAAGGAGGTTGAAAAACA
droYak3 2R:11969694-11969939 - dya_548 GTGTCACATTAGAAC-------T-AGCTTCGTGTGATGACAATTTGTTAG-TTTGCCAAATCAAC------GAGATTCGTCTTATCCATGTGGTCATGTT----CTTACCAATTTGCTCACATTGAAAACGACCCTAACATGAGCCTCT------AA-AA------------------ATA-TCCG--CAATTTCAAA------CT-A----TAT-G--CGCAGTAATTAG---------AAT----T---TTGCTTTTGTTTC--TCCGTACAGGTGATTCGTCCGTTCTTGCTTCGACGCCTCAAGAAGGAGGTGGAAAAACA
droEug1 scf7180000409474:724021-724274 - GTGTCACATTTAAAT---G---T-AGCCTCGTGTGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGCTCAGGTT----CTTATCAGGCTGCTCACATTGAAAACGCCCCTAACACAATTGCATTTA-TAGC-C-----------------TATT-CTTTA--TAATTTCAAA------TTTA----AAT-G--CGCAGTAATCAG---------CAT----A---TTGCTTTTGTTTT--TCCGTACAGGTGATTCGTCCGTTCCTACTTCGACGTCTCAAGAAGGAGGTTGAAAAACA
droBia1 scf7180000302143:1187983-1188234 - GTGTCACATTAAAAC---A---T-AGCCTCGTGTGACGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGTCAAGAT----CTAACC-AGTTGCTCACATTGAAAACGCCCCTGACACGACCATCTTTA-CAAA-A-----------------AGTT-CTCCG--TAATTTCAAA------CT-A----AAT-G--CGCAGTAATTAG---------CAT----A---TTCCTCTTATTTT--TCCATACAGGTAATTCGTCCGTTCCTACTTCGACGCCTCAAGAAGGAGGTGGAAAAACA
droTak1 scf7180000415722:109529-109781 + GTGTCACATTAAAAC---A---T-AGCATCGTGTGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGCCAAGAA----CTAACCAAGTTGCTCACATTGAAAACGCCCCTAACACGACAGCCCTTT-TAAA-A-----------------TATT-TCCCG--TAGTTACAAA------CT-A----AAT-G--CGCAGTAATTAG---------CAT----A---TTGCTTTTGTTTT--TCCCTACAGGTGATTCGTCCGTTCCTACTTCGTCGCCTCAAGAAGGAGGTGGAAAAACA
droEle1 scf7180000491232:155379-155628 - GTGTCACTTTGATAT---T---T-AGCCTCATGTGATGACAATTTGTCAG-TTTGCCAGATAAAG------GAGATGCGTCTTATCCATGTGGTCAAGTT----CACACCATGTTGCTCACATTGAAAACGCCCCTAACACCATATT---TT-TATA-AC-----------------AT-ATTCCA--TAATTTCAAA------CT-A----AAT-G--CGCAGTAATTAG---------CAT----A---TTGCCCTTATTCT--TCCGTGCAGGTGATTCGTCCGTTCCTACTTCGACGCCTCAAGAAGGAGGTGGAAAAACA
droRho1 scf7180000780265:149689-149941 - GTGTCACTTTGATAT---T---T-AGCCTCAAGTGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGTCAAATT----TTAACCAAGTTGCTCACATTGAAAACGCCCCTAACACCACCATATTAAA-CAA-A-----------------TATT-TTCCG--TAATTTCAAA------CT-A----AAT-G--CGCAGTAAATAG---------CAT----A---TTGTCTTTGTTTT--TACGTGCAGGTGATTCGTCCTTTCCTACTTCGACGCCTCAAGAAGGAGGTGGAAAAGCA
droFic1 scf7180000453811:50251-50499 - GTGTCACATTAAAT----A---T-ATCCTCGTGTGATGACAATTTGTTAG-TTTGCCAGATTAAG------GGGGTGCGTCTTATCCATGTGGTCAAGTT----TCCATCAAGCTGTTCACATTGAAAACGCACCTGACAGGATTAT--TAGT--AAAA------------------ATT-TCCCT--TCATTTCAAA------CT-A----AAT-G--CGCAGTAATTAG---------CAT----A---TTGCACTTGTTTC--TCCGTGCAGGTGATTCGTCCGTTCCTACTTCGACGCCTTAAAAAGGAGGTGGAAAAACA
droKik1 scf7180000302411:448029-448283 + GTGTCACATTGATTT-------TACACCTCGTGTGATGACAATTTGTTAG-TTTGCCAAAGGAAA------GAGTGGCGTCTTATCCATGTTCTCAATTTTAACCC--TCAAGTTGATCACATTGAAAATGCTTCTTACACCACCTTT--ACT--TA-TGAT--------------TCATA-ACCT--TAATTTCAAA------CT-A----AAT-G--CGCAGTAATTAG---------CAT----A---TTGCAATTGTTTA--TCCCTGCAGGTGATTCGTCCCTTCCTACTCCGACGCCTCAAGAAGGAGGTGGAGAAGCA
droAna3 scaffold_13266:5021108-5021319 + GTGTCACAT---------A---T-TGCCTCGTGTGATGACACTGTTTTAG-TTTGCCAGATCGAA------GAGGTGCGTCGTGTCCGTGTGGTCTTATC----CCTAGCCAATAGATTGCATAGAATTAGCATCAAACATGTGGTTTACATT--CA-AG------------------TTT-TCAC--AA---------------------------------------------------------------CCTCTTCTTTC--TCCTTACAGGTGATTCGTCCCTTCCTGCTGCGTCGCCTCAAGAAGGAGGTGGAGAAACA
droBip1 scf7180000395751:830631-830823 + GTGTCACACT------------C-TGCCCCAAGTGATGACACTGTTTTAG-TTTGCCAGATCGAT------GAGGTGCGTC-TATCCATGTGGTCTTGCC----CTAGCC-TATAGATTACGTTGAATTAGCATCAGACATTACCACA--A------------------------------------------------------------------------------------------------------CCTCTCCTTTA--TCCTTGCAGGTGATTCGTCCTTTCCTGCTGCGTCGCCTCAAGAAGGAGGTGGAGAAACA
dp5 3:9794773-9795049 - dps_1133 GTGTCACATTGAAAC---A---C-AGCCTCATGTGATGACAATTTGTTAG-TTTGCTAGATCAAGTGG-GAACGGGGCGTCTTATCCATGTGGTTGGTCT----ATGACCAAGCTAATCACATTGAAAACGCTCCTTACACGACCTCACCGC---TA-TGATAGCAGCACTAAGCA--CTA-TCCTCCTAGTTTTAAG------CT-T----AATCT--CGCTGTAATTGA---------CAC----TTTTTCGTCCTTGTGTG--TCCTTGCAGGTGATTCGGCCGTTCCTGCTGCGACGCCTCAAGAAGGAGGTGGAGAAGCA
droPer2 scaffold_4:5110215-5110491 - dpe_1606 GTGTCACATTGAAAC---A---C-TGCCTCATGTGATGACAATTTGTTAG-TTTGCTAGATCAAGTGG-GAACGGGGCGTCTTATCCATGTGGTTGGTCT----ATAACCAAGCTAATCACATTGAAAACGCTCCTTACACGACCTCACCGC---TA-TGATAGCAGCACTAAGCA--CTA-TAATCCTAGTTTTAAG------CT-T----AATAT--CGCTGTAATTGA---------CAC----TTTTTCGTCGTTGTGTG--TCCTTGCAGGTGATTCGGCCGTTCCTGCTGCGACGCCTCAAGAAGGAGGTGGAGAAGCA
droWil2 scf2_1100000004510:1473324-1473553 + dwi_419 GTGTCACATTCGA---------C-AACCTCATGTGAATACAATTTGTAAT-TTTGCCAGAGTAAG------GTGTAGCTTCTTATCCATGTGATAAGATT----CCTAACAAGCTAATCACTTTGACGATGTCTAAGACAG--CTTTT---------------------------------------------TCAGT------TC-AATTGAT------AAAGTGACTCA--TG-----TTT----A---TTCTCTTTGTCTGTCTTTTATTAGGTTATACGACCCTTTCTGTTGCGTCGTCTCAAAAAGGAAGTGGAGAAGCA
droVir3 scaffold_12875:18061323-18061573 - dvi_7640 GTATCACATAAAATTTTTA---T-AACCTCATGTGA-GACAATTTAATAC-CTTGCTAGATTAAATTA---AAGCTGCGACTTATCCATGTGTTCGTGTC----CTTAT--AACTGATCACATTGAATACGCGCTATACACTAGTTC-TTGAA--TA-AA------------------T-A-TTCC--TAATTATAAG------T----------------CAGTAA---GCATGTTTTGATTG---T---TTATTTTTCTTTT--TTTATTCAGGTCATTCGTCCATTTCTGCTGCGTCGCCTTAAAAAGGAGGTGGAAAAGCA
droMoj3 scaffold_6496:11682417-11682666 - dmo_1100 GTGTCACATTGAAT----------TATCTCATGTGATGACAATTTGTTACCCTTGCTAGAGTAAGTTGATGAAGCTGCGACTTATCCATGTGATTGAGTT----TTT-CC-AGCTGATTGCATTGAATGCGCGCTTTACATTACTTT--TATT--CA-TAT---------------ATTT-ATATA-------TCAGTATCAATTT-G----AGA-A--AGTATTAA-------------AATACCTA--------TTTCTCTT--TCTTTATAGGTTATTCGTCCATTTCTGCTGCGTCGGCTTAAAAAAGAGGTGGAGAAGCA
droGri2 scaffold_15245:4190051-4190308 - GTGTCACATTGATTTTCAATAAC-AACCACATGTGATGACAATTTGTTAA-CTTGCTAAACTAAATCT--AAAGCTGCGACTTATCCATGTGATCGTGTC----CTTTCA-AAATTATCACATTGAATACGCGCTTTACACTCCT-TATTTA-TATG-C-----------------ATTT-TGATG--TTGTTTTAAT------TT-G----AGC-AATCGTGTTAATCAA----------TT----A---TTGTTTTTAT------TTACATAGGTCATTCGTCCATTTTTGCTGCGACGCCTTAAAAAGGAGGTGGAGAAGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GTGTCACATTAAAAC-------T-AGCTTCGTGTGATGACAATTTGTTAG-TTTGCCAGATCAAA------GAGATGCGTCTTATCCATGTGGCTAAGTT----CTTACCAATTTATTCACATTGAAAACGCCCCTAACATGACCCTCTTATT--TA-AG------------------TTA-TCCG--TATTTTCAAA------CT-A----AAT-G--CGCAGTAATTAG---------AAT----T---TGGCTTTTGTTTT--TCCGTACAGGTGATTCGTCCGTTTCTACTTCGACGCCTTAAAAAGGAGGTGGAAAAACASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................TTGCCAGATCAAA------GAGATG........................................................................................................................................................................................................................................................19128.0028202500000000100000
....................................................TTGCCAGATCAAA------GAGATGCGTC....................................................................................................................................................................................................................................................2318.00810000000000700000
....................................................TTGCCAGATCAAA------GAGAT.........................................................................................................................................................................................................................................................1817.00701600000000000000
.........................................................................................................................ATTGAAAACGCCCCTAACATGA......................................................................................................................................................................................2214.00400010003000000000
....................................................TTGCCAGATCAAA------GAGATGCGT.....................................................................................................................................................................................................................................................2213.00300000000000300000
......................................................GCCAGATCAAA------GAGA..........................................................................................................................................................................................................................................................1513.00300000000003000000
........................................................................AGATGCGTCTTATCCATGTGGCT......................................................................................................................................................................................................................................2312.00200200000000000000
....................................................TTGCCAGATCAAA------GAGATGC.......................................................................................................................................................................................................................................................2012.00201010000000000000
......................................................................................................................................................................................................................................................................................ATTCGTCCGTTTCTACTTCGAC.........................2212.00200200000000000000
....................................................TTGCCAGATCAAA------GAGATGCGTCTTAT................................................................................................................................................................................................................................................2712.00200000000000200000
....................................................TTGCCAGATCAAA------GAGATGCG......................................................................................................................................................................................................................................................2112.00200000200000000000
.....................................................TGCCAGATCAAA------GAGATGCGTCC...................................................................................................................................................................................................................................................2311.00110000000000000000
......................................................GCCAGATCAAA------GAGATGCG......................................................................................................................................................................................................................................................1911.00100000000001000000
......CATTAAAAC-------T-AGCTTCGTGTGATGAC.............................................................................................................................................................................................................................................................................................2611.00100010000000000000
............................TCGTGTGATGACAATTTGT......................................................................................................................................................................................................................................................................................1911.00100000000001000000
.....................................................................................................................TCACATTGAAAACGCCCCTAACATGA......................................................................................................................................................................................2611.00100000001000000000
......................T-AGCTTCGTGTGATGACAATTTGT......................................................................................................................................................................................................................................................................................2411.00100010000000000000
..................................GATGACAATTTGTTAG-TTTGCCAGATC.......................................................................................................................................................................................................................................................................2711.00100010000000000000
.............................................................................CGTCTTATCCATGTGGCTAAGT..................................................................................................................................................................................................................................2211.00100000000000100000
..GTCACATTAAAAC-------T-AGCTTCGTGT...................................................................................................................................................................................................................................................................................................2411.00100010000000000000
............................................................................................................................................................................................................................................................................................................GCCTTAAAAAGGAGGT.........1611.00100000000001000000
........................................................................................................................CATTGAAAACGCCCCTAACATGA......................................................................................................................................................................................2311.00100010000000000000
......................................................................................CATGTGGCTAAGTT----CTTAC........................................................................................................................................................................................................................1911.00100000000000100000
...........AAAC-------T-AGCTTCGTGTGATGA..............................................................................................................................................................................................................................................................................................2011.00100010000000000000
......................T-AGCTTCGTGTGATGACA............................................................................................................................................................................................................................................................................................1811.00100100000000000000
.................................TGATGACAATTTGTTAG-TTTGCCAGA.........................................................................................................................................................................................................................................................................2611.00100000000010000000
........................................................................................................................................AACATGACCCTCTTATT--TA-AG------------------TT.................................................................................................................................................2311.00100000000000100000
......................................................GCCAGATCAAA------GAGAT.........................................................................................................................................................................................................................................................1611.00100000000001000000
.........TAAAAC-------T-AGCTTCGTGTGATGACA............................................................................................................................................................................................................................................................................................2411.00100010000000000000
.........................................ATTTGTTAG-TTTGCCAGA.........................................................................................................................................................................................................................................................................1811.00100010000000000000
.........................................................................................................................ATTGAAAACGCCCCTAACATGAC.....................................................................................................................................................................................2311.00100000100000000000
.............................................................................................................................AAAACGCCCCTAACATGA......................................................................................................................................................................................1811.00100000001000000000
...................................................................................................................ATTCACATTGAAAACGCCCCTAACATGA......................................................................................................................................................................................2811.00100010000000000000
......................................................GCCAGATCAAA------GAGATG........................................................................................................................................................................................................................................................1711.00100000000001000000
.......................................................................................ATGTGGCTAAGTT----CTTACC.......................................................................................................................................................................................................................1911.00100100000000000000
..............................................................................................................................................................................................................................................................................................................CTTAAAAAGGAGGTGGAA.....1811.00100010000000000000
..........................................TTTGTTAG-TTTGCCAGATCAAA------GAGAT.........................................................................................................................................................................................................................................................2711.00100010000000000000
.............AC-------T-AGCTTCGTGTGATGACA............................................................................................................................................................................................................................................................................................2011.00100100000000000000
......CATTAAAAC-------T-AGCTTCGTGT...................................................................................................................................................................................................................................................................................................2011.00100010000000000000
......CATTAAAAC-------T-AGCTTCGT.....................................................................................................................................................................................................................................................................................................1811.00101000000000000000
...............................................................AA------GAGATGCGTCTTATCCATGTGGC.......................................................................................................................................................................................................................................2511.00100010000000000000
...........................................................................................................................TGAAAACGCCCCTAACATGA......................................................................................................................................................................................2011.00100000001000000000
.....................................................................................................................................................................................................................................................................................GATTCGTCCGTTTCTACTTCGAC.........................2311.00100100000000000000
....CACATTAAAAC-------T-AGCTTCGTGT...................................................................................................................................................................................................................................................................................................2211.00100010000000000000
...................................................TTTGCCAGATCAAA------GAGATGCGTCTTA.................................................................................................................................................................................................................................................2711.00100100000000000000
................................................AG-TTTGCCAGATCAAA------GAGAT.........................................................................................................................................................................................................................................................2111.00100000000001000000
.TGTCACATTAAAAC-------T-AGCTTCGT.....................................................................................................................................................................................................................................................................................................2311.00100100000000000000
...................................................TTTGCCAGATCAAA------GAGATG........................................................................................................................................................................................................................................................2011.00110000000000000000
.............................................................CAAA------GAGATGCGTCTTATCCATGTGGCG......................................................................................................................................................................................................................................2811.00101000000000000000
.............AC-------T-AGCTTCGTGTGATGAC.............................................................................................................................................................................................................................................................................................1911.00100100000000000000
.............................................................CAAA------GAGATGCGTCTTATCCATGTGG........................................................................................................................................................................................................................................2611.00100010000000000000
...TCACATTAAAAC-------T-AGCTTCGTGT...................................................................................................................................................................................................................................................................................................2311.00100010000000000000
............AAC-------T-AGCTTCGTGTA..................................................................................................................................................................................................................................................................................................1560.17100000010000000000
droSec2
GTGTCACATTAAAAC-------T-AGCTTCGTGTGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGCTAAGTT----CTTACCAATTTGTTCACATTGAAAACGCCCCTAACATGACCCTCTTATT--TA-AG------------------TTA-TTCG--TATTTTCAAA------CT-A----AAT-G--CGAAGTAATTAG---------AAT----T---TTGCTTTTGTTTC--TCCGTAAAGGTGATTCGTCCGTTCCTACTTCGACGCCTTAAAAAGGAGGTGGAAAAACASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................TTGCCAGATCAAG------GAGATGCGTC....................................................................................................................................................................................................................................................23113.001301120
....................................................TTGCCAGATCAAG------GAGATGCGTCTTAT................................................................................................................................................................................................................................................2714.0040220
....................................................TTGCCAGATCAAG------GAGAT.........................................................................................................................................................................................................................................................1814.0040040
........................AGCTTCGTGTGATGACAATTTGTTAG-TT................................................................................................................................................................................................................................................................................2812.0022000
....................................................TTGCCAGATCAAG------GAGATGCGT.....................................................................................................................................................................................................................................................2212.0021001
...................................................TTTGCCAGATCAAG------GAGATGCGTC....................................................................................................................................................................................................................................................2412.0021010
....................................................TTGCCAGATCAAG------GAGATGC.......................................................................................................................................................................................................................................................2012.0020020
...........AAAC-------T-AGCTTCGTGTGAT................................................................................................................................................................................................................................................................................................1812.0020020
....................................................TTGCCAGATCAAG------GAGATGCGTCT...................................................................................................................................................................................................................................................2412.0021100
....................................................TTGCCAGATCAAG------GAGATGCGTCTT..................................................................................................................................................................................................................................................2512.0020020
.......ATTAAAAC-------T-AGCTTCGTGT...................................................................................................................................................................................................................................................................................................1911.0010010
......................T-AGCTTCGTGTGATGACAATTTGT......................................................................................................................................................................................................................................................................................2411.0010010
...................................................TTTGCCAGATCAAG------GAGATGCGTCTT..................................................................................................................................................................................................................................................2611.0010010
...........AAAC-------T-AGCTTCGTGTGATGACA............................................................................................................................................................................................................................................................................................2211.0010010
......................T-AGCTTCGTGTGATGACA............................................................................................................................................................................................................................................................................................1811.0010010
....CACATTAAAAC-------T-AGCTTCGTGT...................................................................................................................................................................................................................................................................................................2211.0010010
...................................................TTTGCCAGATCAAG------GAGATG........................................................................................................................................................................................................................................................2011.0010010
......................................................GCCAGATCAAG------GAGATGCGTCTT..................................................................................................................................................................................................................................................2311.0010100
............................................................................................................................GAAAACGCCCCTAACATGA......................................................................................................................................................................................1911.0011000
...........................................TTGTTAG-TTTGCCAGATCAAG------GAGA..........................................................................................................................................................................................................................................................2511.0010010
...........................................................ATCAAG------GAGATGCGTCTT..................................................................................................................................................................................................................................................1811.0010010
...........................................................ATCAAG------GAGATGCGTCTTATC...............................................................................................................................................................................................................................................2111.0010010
...............................................................AG------GAGATGCGTCTTATCCATGTGGC.......................................................................................................................................................................................................................................2511.0010010
..........................................................GATCAAG------GAGATGCGTCTT..................................................................................................................................................................................................................................................1911.0010010
...................................................TTTGCCAGATCAAG------GAGATGCGTCTTA.................................................................................................................................................................................................................................................2711.0010100
....................................................TTGCCAGATCAAG------GAGATGCGTCTTATC...............................................................................................................................................................................................................................................2811.0010010
..................................................................................................................................................................................................................................................................................................CTACTTCGACGCCTTAAAAAGGA............2311.0010010
.........................GCTTCGTGTGATGACAATTTGTTAG-TT................................................................................................................................................................................................................................................................................2711.0011000
.........................................................................GATGCGTCTTATCCATGTGGCT......................................................................................................................................................................................................................................2211.0010010
................................GTGATGACAATTTGTTAG-T.................................................................................................................................................................................................................................................................................1911.0010010
...............................................TAG-TTTGCCAGATCAAG------G.............................................................................................................................................................................................................................................................1811.0010010
.......ATTAAAAC-------T-AGCTTCGTGTGATGAC.............................................................................................................................................................................................................................................................................................2511.0010010
.............AC-------T-AGCTTCGTGTGATGACA............................................................................................................................................................................................................................................................................................2011.0010010
.......................................................................GAGATGCGTCTTATCCATGTGGCTA.....................................................................................................................................................................................................................................2511.0010010
.....................................................TGCCAGATCAAG------GAGATGCGT.....................................................................................................................................................................................................................................................2111.0010010
...........................................TTGTTAG-TTTGCCAGATCAAG------GA............................................................................................................................................................................................................................................................2311.0010010
............AAC-------T-AGCTTCGTGTGATGACAATT.........................................................................................................................................................................................................................................................................................2411.0010010
..............................................................................................................AATTTGTTCACATTGAAAACGCCCCT.............................................................................................................................................................................................2611.0010010
.........................................................................GATGCGTCTTATCCATGTGGCTAAG...................................................................................................................................................................................................................................2511.0010010
..........................CTTCGTGTGATGACAATTTG.......................................................................................................................................................................................................................................................................................2011.0010010
..........................................................................ATGCGTCTTATCCATGTGGCTAAGT..................................................................................................................................................................................................................................2511.0010100
dm3
GTGTCACATTAAAAC-------T-AGCTTCGTGTGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGCTGAGTT----CTTACCAATTTATTCACATTGAAAACGCCCCTAACATGACCCTCTTATT--TA-AG------------------TTA-TCCT--TATTTTCAAA------AT-A----AAT-G--CGCAGTAATTAG---------AAT----T---TGGCTTTTGTTTC--TCCGTACAGGTGATTCGTCCGTTCCTACTTCGACGCCTCAAAAAGGAGGTGGAAAAACASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................................................................................................ATTGAAAACGCCCCTAACATGA......................................................................................................................................................................................221426.0042600000000000000000000001000000000000001000000010000000000000000000000000000000000000000000000000010000000000000000100000000000000000000300300000000000000000000000000000000000000000000000000000000000000000000000000000320410922904202042002000010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000010013
....................................................TTGCCAGATCAAG------GAGATGCGTC....................................................................................................................................................................................................................................................231223.00223000000000000000000000009000000000000000200110100021000000000000000000000000000000000000010000010100000000000000000000000000000000000000100000100540000000000000000000000000000000000000000000020000000000000030010000081210040201080001000027000000000000000000000000000000100000000000000000006000072449000300322190100000000070010010023000
.....................................................................................................................TCACATTGAAAACGCCCCTAACATGA......................................................................................................................................................................................261153.0015300000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000004010000000000300030000000000000000000000105100000000000010000000000000000001000000000000000001000000000000000000000000000300342218119337000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................ACATTGAAAACGCCCCTAACATGA......................................................................................................................................................................................241138.0013800000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000010000000000101000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000248124111135100100000000000000000000000000000000000000000000000000000000000000100000020000000000000000000000000000
....................................................TTGCCAGATCAAG------GAGATGCGT.....................................................................................................................................................................................................................................................221136.0013600000000000000000010001400000000000000000000000000020000000000000000000000000000000000001000000000000000000000000000000000000000000000001000000001000200000000000000000000000000000000000000002000000000000410000000001020200110000200020000000000000000000000000000000010000000000000000000000010040513290001002647000000000000001010003000
....................................................TTGCCAGATCAAG------GAGATGCGTCTT..................................................................................................................................................................................................................................................251118.0011800000000000000000000000100000000000000110000020000000100000000000000000000000000000000000000000000001000000000000000000000000000000000000000000005000200002000000000000000000000000200000000000000000300000100000500001300110300021001000000000000000000100000000000000000000000000000000000001001002270000004908000000000023000001001000
......................................................................................................................CACATTGAAAACGCCCCTAACATGA......................................................................................................................................................................................251114.0011400000000000000000000001000000000000000000000000000000000000100000000000000000000000000100000001000000000000000010000000000000000000000112100000000000000000000000000000000000100000000000000000000000000000000000000000000341221110024000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001
....................................................TTGCCAGATCAAG------GAGATGCGTCT...................................................................................................................................................................................................................................................24196.009600000000000000000000000100000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002010000000000000000000000000000000000000000001000001000000510000000002910030200030000000000000000000000100000000000002000000000000000000000002001023240000003325000000000000000100004000
.....................................................TGCCAGATCAAG------GAGATGCGTC....................................................................................................................................................................................................................................................22192.009200000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000200001000000300000000000000000000000000000000100000000000000000000000000000000000000000000000000000010000000000010102000077000
....................................................TTGCCAGATCAAG------GAGATGC.......................................................................................................................................................................................................................................................20181.008100000000000000000000000100000000000000000000020000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000201002010110000000000000000000000000000000000001100000000000000106002500006600010001010000000000000000000000000000000000000000000000000000000000001000002260001001813000000000002001100000000
....................................................TTGCCAGATCAAG------GAGATG........................................................................................................................................................................................................................................................19180.008000000000000000000000000200000000000000010000010000000000011100000000000000000000000000000000000000010000000000000000000000000000000000000000100002000000000000000000000000000000000000000000000000000000000000000000005020040022060000000000000000000000000000000000000000000000000000000000000000018490000002303000000000000000000000000
....................................................TTGCCAGATCAAG------GAGATGCGTCTTA.................................................................................................................................................................................................................................................26175.007500000000000000000000000100000000000000000200010000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000510000000001000040300010000000010000000000000000000000000000000000000000000000000000000001040000003725000000000000000020000000
............................................................................................................................GAAAACGCCCCTAACATGA......................................................................................................................................................................................19174.00740000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011827013024000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005
..........................................................................................................................TTGAAAACGCCCCTAACATGA......................................................................................................................................................................................21172.0072000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000003000000100000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000919014126100000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TGAAAACGCCCCTAACATGA......................................................................................................................................................................................20172.0072000000000000000000000000000000000000000000000100000000000000000000000000000000000000000100000000000000000010000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000210807030000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................ATTCACATTGAAAACGCCCCTAACATGA......................................................................................................................................................................................28165.00650000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021701406025000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................TTGCCAGATCAAG------GAGATGCGTCTTAT................................................................................................................................................................................................................................................27141.004100000000000000000000000300000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000001000000300000100000000002000000001020000000000000000000000000000000000000000000000000000000000000000001110000001016000000000003010000001000
........................................................................................................................CATTGAAAACGCCCCTAACATGA......................................................................................................................................................................................23138.00380000000000000000000000000000000000000000010001000000000000000000000000000000000000000000100000000000000000010001000000000000000000000000210000000000000000000000000000010000000000000000000000000000000000000000000000000007080203100000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000006
....................................................TTGCCAGATCAAG------GAGATGCG......................................................................................................................................................................................................................................................21134.003400000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000010002010000000000000000000000000000000000000000000000000000000000000000025050000001203000000000000000000000000
...................................................TTTGCCAGATCAAG------GAGATGCGTC....................................................................................................................................................................................................................................................24133.00330000000000000000000000000000000000000001011000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120002000100000000000000000000000010000000000000000000000001000000000000000001101000000702000000000100000000002000
....................................................TTGCCAGATCAAG------GAGAT.........................................................................................................................................................................................................................................................18133.00330000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000100000000000000000000000000000000000000000000800000010000100000000000000000000000000000000000000000000000000000010000200021110000000402000000000000000000000000
.........................................................................................................................ATTGAAAACGCCCCTAACATG.......................................................................................................................................................................................21131.003100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000080204015000100000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................TTTGCCAGATCAAG------GAGATGCGT.....................................................................................................................................................................................................................................................23128.00280000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000030000010000000000221000021000000000000000000000000000000000000000000000000000000000000000000000220000000504000000000000000010000000
................................................AG-TTTGCCAGATCAAG------GAG...........................................................................................................................................................................................................................................................19125.00250000000000000000000000000000000000000001000001000001000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000201000000010006000200000000000000000000000000000000000000000000000000000000000000000000102000000200010000001000000000000000
...................................................TTTGCCAGATCAAG------GAGATGCGTCT...................................................................................................................................................................................................................................................25125.00250000000000000000000000000000000000000000001001000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100010000000000000000000000000000000000000000003000000000001000000000000002000003000000000000000000000010000000000000000000000000000000100000100000100000000301000000000000000010001000
................................................AG-TTTGCCAGATCAAG------GAGAT.........................................................................................................................................................................................................................................................21122.00220000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000002002000000001000000000011002000201000000000000000000000000000000000000000000000000000001000000000000201000000300000000000000000000000000
...................................................TTTGCCAGATCAAG------GAGAT.........................................................................................................................................................................................................................................................19121.00210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000020000000000100000000000000000000000000000000000000000000000000000000000001100000000000000000002122000000501000100000000000000001000
....................................................TTGCCAGATCAAG------GAGATGCGTCTTATC...............................................................................................................................................................................................................................................28120.00200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000090000001000000000000001000202000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000011000000
...........AAAC-------T-AGCTTCGTGTGATG...............................................................................................................................................................................................................................................................................................19119.00190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000007800000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
...................................................TTTGCCAGATCAAG------GAGATGC.......................................................................................................................................................................................................................................................21117.00170000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000002000000000000000000000300000000001000000000000000000000000000000000000000000000000000000000000100000022000000210000000000000000000000000
...................................................TTTGCCAGATCAAG------GAGATGCGTCTT..................................................................................................................................................................................................................................................26117.00170000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000100000001000000000010000000000000000001000000000000000000000000000000000000000000000000000000000010000000412010000001000000100000000
................................................AG-TTTGCCAGATCAAG------GAGATGCGTC....................................................................................................................................................................................................................................................26117.00170000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200001000000000000000000000000000000000000000000000000000030000000000000001000100000000000000000000000000000000000000000000000000000000000000000100000010000210000100000000000000002000
................................................AG-TTTGCCAGATCAAG------GAGATGCGTCT...................................................................................................................................................................................................................................................27115.00150000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000002010000101000100020000000000000000
...................................................TTTGCCAGATCAAG------GAGATGCGTCTTA.................................................................................................................................................................................................................................................27115.00150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000001000000000303000000000000001211000000
.........................................................................................................................ATTGAAAACGCCCCTAACATGAC.....................................................................................................................................................................................23114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000020001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007
.....................................................TGCCAGATCAAG------GAGATGCGT.....................................................................................................................................................................................................................................................21114.00140000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000001000000000111000000000000000000000000000000000000000000000000000000000000000000000010000200000000000000000000000000000005000
...................................................TTTGCCAGATCAAG------GAGATG........................................................................................................................................................................................................................................................20114.00140000000000000000000000010000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000400000000000000000000000000
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...............................................TAG-TTTGCCAGATCAAG------GAGA..........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................ATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATG........................................................................................................................................................................................................................................................3511.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................GAGATGCGTCTTATCCATGT..........................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GTCACATTAAAAC-------T-AGCTT........................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TTTGCCAGATCAAG------GAGATGCGTA....................................................................................................................................................................................................................................................2411.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................TTTGTTAG-TTTGCCAGATCAAG------GA............................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AAAAC-------T-AGCTTCGTGTGATGACAATTTG.......................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........................TTCGTGTGATGACAATTTGTTAG-..................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
........................................................CAGATCAAG------GAGATGCGTCTTATCCAT............................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................CCAGATCAAG------GAGATGCG......................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..................................GATGACAATTTGTTAG-TTT...............................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TTGCCAGATCAAG------GAGA..........................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................ATTGAAAACGCCCCTAACA.........................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................CATTGAAAACGCCCCTAACAT........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TCAAG------GAGATGCGTCTTATCCA.............................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CATTAAAAC-------T-AGCTTCGTGTGATGAC.............................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.................................................................................................GTT----CTTACCAATTTATTCAC............................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................AGATGCGTCTTATCCATGTGG........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
................................................AG-TTTGCCAGATCAAG------GAGATG........................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................AA------AT-A----AAT-G--CGCAGTAATTAG---------AAT----T---TG........................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
droEre2
GTGTCACATTAAAAC-------T-AGCTTCGTGTGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGTCATGTT----CTT-CCAATTTGTTCACATTGAATACGCCCCTAACATGACCCTCCTATT-TTA-AG------------------TTA-TCCG--TTATTTCAAA------CT-A----TAT-G--CGCAGTAATTAG---------AAT--------TTGCGTTTGTTTC--TCCGTACAGGTGATTCGTCCGTTCTTACTTCGACGCCTCAAGAAGGAGGTTGAAAAACASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................TTGCCAGATCAAG------GAGATGCGTC....................................................................................................................................................................................................................................................23113.00132108110
................................................................................................................................ACGCCCCTAACATGA......................................................................................................................................................................................15111.001100000011
...................................................TTTGCCAGATCAAG------GAGATG........................................................................................................................................................................................................................................................2015.0054000100
.........................................................................GATGCGTCTTATCCATGTGGT.......................................................................................................................................................................................................................................2115.0050004100
....................................................TTGCCAGATCAAG------GAGATGCGT.....................................................................................................................................................................................................................................................2215.0052201000
...................................................TTTGCCAGATCAAG------GAGATGCGTC....................................................................................................................................................................................................................................................2415.0050104000
.........................................................................GATGCGTCTTATCCATGTGGTC......................................................................................................................................................................................................................................2214.0040201100
...................................................TTTGCCAGATCAAG------GAGATGCGTCTTATC...............................................................................................................................................................................................................................................2914.0040000004
....................................................TTGCCAGATCAAG------GAGATGCGTCTT..................................................................................................................................................................................................................................................2513.0030001110
....................................................TTGCCAGATCAAG------GAGATGC.......................................................................................................................................................................................................................................................2013.0030101010
.........................................................................GATGCGTCTTATCCATGTGGTCA.....................................................................................................................................................................................................................................2313.0031000200
.............AC-------T-AGCTTCGTGTGATGAC.............................................................................................................................................................................................................................................................................................1913.0031001010
...................................................TTTGCCAGATCAAG------GAGATGCGTCTTA.................................................................................................................................................................................................................................................2713.0033000000
.........................................................................................................................ATTGAATACGCCCCTAACATGA......................................................................................................................................................................................2213.0032000010
.....................................................................................................................TCACATTGAATACGCCCCTAACATGA......................................................................................................................................................................................2613.0031010001
....................................................TTGCCAGATCAAG------GAGAT.........................................................................................................................................................................................................................................................1813.0030100020
..............................................................................................CATGTT----CTT-CCAATTTGTTCAC............................................................................................................................................................................................................2213.0030200100
.........................................................................................................................ATTGAATACGCCCCTAACATGAC.....................................................................................................................................................................................2313.0030300000
...........AAAC-------T-AGCTTCGTGTGATGAC.............................................................................................................................................................................................................................................................................................2112.0020001100
.......ATTAAAAC-------T-AGCTTCGTGT...................................................................................................................................................................................................................................................................................................1912.0021000010
.......ATTAAAAC-------T-AGCTTCGTGTG..................................................................................................................................................................................................................................................................................................2012.0020002000
......CATTAAAAC-------T-AGCTTCGTGTG..................................................................................................................................................................................................................................................................................................2112.0021000010
........................................................................................................................CATTGAATACGCCCCTAACATGAC.....................................................................................................................................................................................2412.0020200000
...................................................TTTGCCAGATCAAG------GAGATGCGT.....................................................................................................................................................................................................................................................2312.0021100000
....CACATTAAAAC-------T-AGCTTCGTGT...................................................................................................................................................................................................................................................................................................2212.0020000200
...........................TTCGTGTGATGACAATTTGTTAG-TTTGCC............................................................................................................................................................................................................................................................................2912.0020200000
..........................................................................ATGCGTCTTATCCATGTGGTC......................................................................................................................................................................................................................................2112.0020001010
................................................................................................................TTTGTTCACATTGAATACGCCCCTAAC..........................................................................................................................................................................................2712.0020200000
....................................................TTGCCAGATCAAG------GAGATGCGTCTTAT................................................................................................................................................................................................................................................2712.0021100000
........................................AATTTGTTAG-TTTGCCAGATCAAG------GAG...........................................................................................................................................................................................................................................................2711.0010001000
.....................................................................................................................TCACATTGAATACGCCCCT.............................................................................................................................................................................................1911.0010001000
.......................................................................................................................ACATTGAATACGCCCCTAACATGA......................................................................................................................................................................................2411.0011000000
......................................................................................................................CACATTGAATACGCCCCTAACATGA......................................................................................................................................................................................2511.0011000000
......................................................................................................................................................................................................................................................................................................TTCGACGCCTCAAGAAGGA............1911.0010001000
.........................................ATTTGTTAG-TTTGCCAGATCAAG------GA............................................................................................................................................................................................................................................................2511.0010001000
...............................................................AG------GAGATGCGTCTTATCCATGTG.........................................................................................................................................................................................................................................2311.0010100000
.....................................................................................................................................................................................................................................................................................................CTTCGACGCCTCAAGAAGGA............2011.0010001000
..............................................................AAG------GAGATGCGTCTTATCCATGTGGTC......................................................................................................................................................................................................................................2711.0010100000
........................................................CAGATCAAG------GAGATGCGTCTTATCC..............................................................................................................................................................................................................................................2511.0010100000
..............................................................................................CATGTT----CTT-CCAATTTGTTCACATT.........................................................................................................................................................................................................2511.0010100000
...............................................................................................ATGTT----CTT-CCAATTTGTTCACATT.........................................................................................................................................................................................................2411.0010100000
....................................................................................TCCATGTGGTCATGTT----CTT-CCAATTTGT................................................................................................................................................................................................................2811.0011000000
...................................................................................................................GTTCACATTGAATACGCCCCTAACATGA......................................................................................................................................................................................2811.0010100000
...........................................................ATCAAG------GAGATGCGTCTTAT................................................................................................................................................................................................................................................2011.0010000100
.............................................GTTAG-TTTGCCAGATCAAG------..............................................................................................................................................................................................................................................................1911.0010001000
...........................................................ATCAAG------GAGATGCGTCTTATCCATGTGGT.......................................................................................................................................................................................................................................2911.0010000100
..............................................................................GTCTTATCCATGTGGTCA.....................................................................................................................................................................................................................................1811.0010001000
............................TCGTGTGATGACAATTTGTTAG-TTTGCC............................................................................................................................................................................................................................................................................2811.0010100000
..........................................................................ATGCGTCTTATCCATGTGGTCA.....................................................................................................................................................................................................................................2211.0010000100
.............................................................................CGTCTTATCCATGTGGTC......................................................................................................................................................................................................................................1811.0010100000
........................................AATTTGTTAG-TTTGCCAGATCA......................................................................................................................................................................................................................................................................2211.0010001000
..................................GATGACAATTTGTTAG-TTTGCC............................................................................................................................................................................................................................................................................2211.0010100000
....................................................TTGCCAGATCAAG------GAGATGCGTCT...................................................................................................................................................................................................................................................2411.0010001000
.....................................................TGCCAGATCAAG------GAGATGCGT.....................................................................................................................................................................................................................................................2111.0010001000
.........................................................AGATCAAG------GAGATGCGTCTTA.................................................................................................................................................................................................................................................2111.0011000000
...................................................................................ATCCATGTGGTCATGTT----CTT-CC.......................................................................................................................................................................................................................2211.0010100000
......................................................GCCAGATCAAG------GAGATGC.......................................................................................................................................................................................................................................................1811.0010000010
......CATTAAAAC-------T-AGCTTCGTGT...................................................................................................................................................................................................................................................................................................2011.0011000000
...............................TGTGATGACAATTTGTTAG-TTTGCCAG..........................................................................................................................................................................................................................................................................2711.0010001000
...............................................................................................ATGTT----CTT-CCAATTTGTTC..............................................................................................................................................................................................................1911.0010001000
..............................................................AAG------GAGATGCGTCTTATCCATGTGGT.......................................................................................................................................................................................................................................2611.0011000000
.............AC-------T-AGCTTCGTGTGATGACAATTTGT......................................................................................................................................................................................................................................................................................2611.0010010000
..............................................................AAG------GAGATGCGTCTTATCC..............................................................................................................................................................................................................................................1911.0010100000
........................................................................AGATGCGTCTTATCCATGTGGTCATGT..................................................................................................................................................................................................................................2711.0010000100
...........................................TTGTTAG-TTTGCCAGATCAA.....................................................................................................................................................................................................................................................................2011.0010001000
..............C-------T-AGCTTCGTGTGATGACA............................................................................................................................................................................................................................................................................................1911.0010001000
......CATTAAAAC-------T-AGCTTCGTGTGATGAC.............................................................................................................................................................................................................................................................................................2611.0010000100
..................................GATGACAATTTGTTAG-TTTGCCAGAT........................................................................................................................................................................................................................................................................2611.0011000000
...................................................TTTGCCAGATCAAG------GAGATGCGTCTT..................................................................................................................................................................................................................................................2611.0011000000
.....................................................................................................................TCACATTGAATACGCCCCTAACATGAC.....................................................................................................................................................................................2711.0010100000
.......................................................................GAGATGCGTCTTATCCATGTGGTCA.....................................................................................................................................................................................................................................2511.0010100000
.....................................................TGCCAGATCAAG------GAGATGCGTCT...................................................................................................................................................................................................................................................2311.0011000000
.............................................................CAAG------GAGATGCGTCTTATCCATGTGGTC......................................................................................................................................................................................................................................2811.0010100000
...........................TTCGTGTGATGACAATTTGTTAG-T.................................................................................................................................................................................................................................................................................2411.0010100000
...................................................TTTGCCAGATCAAG------GAGATGC.......................................................................................................................................................................................................................................................2111.0010001000
.....ACATTAAAAC-------T-AGCTTCGTGT...................................................................................................................................................................................................................................................................................................2111.0010100000
..............................................................AAG------GAGATGCGTCTTATCCATGTG.........................................................................................................................................................................................................................................2411.0010001000
...................................................................................................................GTTCACATTGAATACGCCCCTAACATGAC.....................................................................................................................................................................................2911.0010100000
...........................................TTGTTAG-TTTGCCAGATC.......................................................................................................................................................................................................................................................................1811.0010001000
.......................................................................................................................................................................................................................................................................................TTCGTCCGTTCTTACTTCGACG........................2211.0011000000
.....................................................................................................................TCACATTGAATACGCCCCTAACATG.......................................................................................................................................................................................2511.0011000000
............................................................TCAAG------GAGATGCGTCTTATC...............................................................................................................................................................................................................................................2011.0010100000
.................................................G-TTTGCCAGATCAAG------GAGATGCGTC....................................................................................................................................................................................................................................................2511.0010001000
........................................................................................................CTT-CCAATTTGTTCACATTGAATACG..................................................................................................................................................................................................2611.0010100000
...................................ATGACAATTTGTTAG-TTTGC.............................................................................................................................................................................................................................................................................2011.0010001000
...................................................................................................................GTTCACATTGAATACGCCCCT.............................................................................................................................................................................................2111.0010100000
...........................................TTGTTAG-TTTGCCAGATCAAG------GAGA..........................................................................................................................................................................................................................................................2511.0010000100
.............................................GTTAG-TTTGCCAGATCAAG------GAGA..........................................................................................................................................................................................................................................................2311.0010000010
.............................................GTTAG-TTTGCCAGATCAAG------GAG...........................................................................................................................................................................................................................................................2211.0010000100
...................................................................................................................GTTCACATTGAATACGCCCCTAACATG.......................................................................................................................................................................................2711.0011000000
..................................................................................TATCCATGTGGTCATGTT----CTT-CC.......................................................................................................................................................................................................................2311.0010100000
..............................................................................................CATGTT----CTT-CCAATTTGTT...............................................................................................................................................................................................................1911.0010000100
...........AAAC-------T-AGCTTCGTGTGATGACA............................................................................................................................................................................................................................................................................................2211.0010000010
...................................................TTTGCCAGATCAAG------GAGAT.........................................................................................................................................................................................................................................................1911.0011000000
..........................................TTTGTTAG-TTTGCCAGATC.......................................................................................................................................................................................................................................................................1911.0010100000
............................TCGTGTGATGACAATTTGTTAG-T.................................................................................................................................................................................................................................................................................2311.0010100000
.......................................................................................ATGTGGTCATGTT----CTT-CCAATTTGTTC..............................................................................................................................................................................................................2711.0010100000
....................................................TTGCCAGATCAAG------GAGATGCGTCTTA.................................................................................................................................................................................................................................................2611.0010001000
.........................................................................................................TT-CCAATTTGTTCACATTGAATACGCCC...............................................................................................................................................................................................2811.0010100000
.................................................................................TTATCCATGTGGTCATGTT----CTT-CC.......................................................................................................................................................................................................................2411.0010001000
................................................AG-TTTGCCAGATCAAG------GAGATGCGTC....................................................................................................................................................................................................................................................2611.0010000100
..............................GTGTGATGACAATTTGTTAG-TTTGCC............................................................................................................................................................................................................................................................................2611.0010100000
.........................................................................GATGCGTCTTATCCATGT..........................................................................................................................................................................................................................................1820.5010100000
droYak3
GTGTCACATTAGAAC-------T-AGCTTCGTGTGATGACAATTTGTTAG-TTTGCCAAATCAAC------GAGATTCGTCTTATCCATGTGGTCATGTT----CTTACCAATTTGCTCACATTGAAAACGACCCTAACATGAGCCTCT------AA-AA------------------ATA-TCCG--CAATTTCAAA------CT-A----TAT-G--CGCAGTAATTAG---------AAT----T---TTGCTTTTGTTTC--TCCGTACAGGTGATTCGTCCGTTCTTGCTTCGACGCCTCAAGAAGGAGGTGGAAAAACASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................TCACATTGAAAACGACCCTAACATGA......................................................................................................................................................................................26121.0021032000000016
..................................................................................................................TGCTCACATTGAAAACGACCCTAACATGA......................................................................................................................................................................................2918.00800000000008
..................................GATGACAATTTGTTAG-TTTGCC............................................................................................................................................................................................................................................................................2217.00702400010000
....................................................TTGCCAAATCAAC------GAGATTCGTC....................................................................................................................................................................................................................................................2316.00600600000000
....................................................TTGCCAAATCAAC------GAGATTCGTCT...................................................................................................................................................................................................................................................2416.00600010050000
....................................................TTGCCAAATCAAC------GAGATTCGTCTTATCC..............................................................................................................................................................................................................................................2914.00400300010000
..........................................................................................................................TTGAAAACGACCCTAACATGA......................................................................................................................................................................................2114.00402000010001
......CATTAGAAC-------T-AGCTTCGTGTGATGAC.............................................................................................................................................................................................................................................................................................2614.00400000040000
....................................................TTGCCAAATCAAC------GAGATTCGTCTT..................................................................................................................................................................................................................................................2514.00401200010000
....................................................TTGCCAAATCAAC------GAGATTCGTCTTATC...............................................................................................................................................................................................................................................2813.00300300000000
............AAC-------T-AGCTTCGTGTGATGACA............................................................................................................................................................................................................................................................................................2113.00300000030000
.............................................................CAAC------GAGATTCGTCTTATCCATGTGGTC......................................................................................................................................................................................................................................2813.00302000010000
....................................................TTGCCAAATCAAC------GAGATTCGT.....................................................................................................................................................................................................................................................2213.00300100110000
..........................................................................ATTCGTCTTATCCATGTGGTCATGT..................................................................................................................................................................................................................................2513.00301000110000
..........................................................................ATTCGTCTTATCCATGTGGTC......................................................................................................................................................................................................................................2112.00202000000000
............................................................................................................................GAAAACGACCCTAACATGA......................................................................................................................................................................................1912.00202000000000
..GTCACATTAGAAC-------T-AGCTTCGTGT...................................................................................................................................................................................................................................................................................................2412.00200010010000
.............................................................................CGTCTTATCCATGTGGTCATGT..................................................................................................................................................................................................................................2212.00201000010000
................................................................C------GAGATTCGTCTTATCCATGTGGTC......................................................................................................................................................................................................................................2512.00200001010000
.........................................................................................................................ATTGAAAACGACCCTAACATGA......................................................................................................................................................................................2212.00201000010000
............................................................TCAAC------GAGATTCGTCTTATCCATGTGGTC......................................................................................................................................................................................................................................2912.00200100010000
......................................................................................................................................................................................................................................................................................ATTCGTCCGTTCTTGCTTCGACGCCT.....................2612.00201100000000
.........................................................................................................TTACCAATTTGCTCACATTGAAAAC...................................................................................................................................................................................................2511.00101000000000
...................................................TTTGCCAAATCAAC------GAGATTCGTCTTA.................................................................................................................................................................................................................................................2711.00100010000000
..................................GATGACAATTTGTTAG-TTTGCCAAA.........................................................................................................................................................................................................................................................................2511.00101000000000
.................................................................................................GTT----CTTACCAATTTGCTCACATTGAAAAC...................................................................................................................................................................................................2911.00101000000000
....................................................TTGCCAAATCAAC------GAGATTCGTCTTA.................................................................................................................................................................................................................................................2611.00100000010000
.............................................................................................................CAATTTGCTCACATTGAAAACGACCC..............................................................................................................................................................................................2611.00100100000000
........................................AATTTGTTAG-TTTGCCAAATCAAC------GA............................................................................................................................................................................................................................................................2611.00100100000000
...................................ATGACAATTTGTTAG-TTTGCC............................................................................................................................................................................................................................................................................2111.00100100000000
................................................................................................................TTTGCTCACATTGAAAACGACC...............................................................................................................................................................................................2211.00100100000000
........................................................................AGATTCGTCTTATCCATGTGGTC......................................................................................................................................................................................................................................2311.00101000000000
...................................................................................................................................................................................................................................................................................................TGCTTCGACGCCTCAAGAAGGA............2211.00100100000000
......CATTAGAAC-------T-AGCTTCGTGTGAT................................................................................................................................................................................................................................................................................................2311.00100000010000
.....................................................................................................................TCACATTGAAAACGACCCTAAC..........................................................................................................................................................................................2211.00100010000000
................................................................................................................................................................................................................................................................................................TCTTGCTTCGACGCCTCAAGAAGGAGGT.........2811.00100100000000
..................................GATGACAATTTGTTAG-TTTGC.............................................................................................................................................................................................................................................................................2111.00100100000000
......CATTAGAAC-------T-AGCTTCGTGTGATGACA............................................................................................................................................................................................................................................................................................2711.00100000100000
................................................................C------GAGATTCGTCTTATCCATG...........................................................................................................................................................................................................................................2011.00100100000000
.......................................CAATTTGTTAG-TTTGCCAAAT........................................................................................................................................................................................................................................................................2111.00100100000000
.........................................................................................................................ATTGAAAACGACCCTAACATGAG.....................................................................................................................................................................................2311.00100000010000
...................................................TTTGCCAAATCAAC------GAGATTCGTCTT..................................................................................................................................................................................................................................................2611.00100010000000
.......................................................................................................................................................................................................................................................................................TTCGTCCGTTCTTGCTTCGACGCCT.....................2511.00101000000000
..................................................................................................................................................................................................................................................................................................................AGAAGGAGGTGGAAAAAC.1811.00100100000000
.....................................................TGCCAAATCAAC------GAGATTCGTCTTATC...............................................................................................................................................................................................................................................2711.00100100000000
....................................TGACAATTTGTTAG-TTTGCCAAAT........................................................................................................................................................................................................................................................................2411.00100100000000
......CATTAGAAC-------T-AGCTTCGTGTG..................................................................................................................................................................................................................................................................................................2111.00100000010000
...............................................................AC------GAGATTCGTCTTATCCATGTGGT.......................................................................................................................................................................................................................................2511.00100100000000
...................................................TTTGCCAAATCAAC------GAGATTCGTCTTAT................................................................................................................................................................................................................................................2811.00100100000000
...........GAAC-------T-AGCTTCGTGTGAT................................................................................................................................................................................................................................................................................................1811.00100000100000
...........................................................................TTCGTCTTATCCATGTGGTC......................................................................................................................................................................................................................................2011.00100000010000
...................................................TTTGCCAAATCAAC------GAGATTCGT.....................................................................................................................................................................................................................................................2311.00101000000000
........................................................................................................................CATTGAAAACGACCCTAACATGA......................................................................................................................................................................................2311.00100000010000
..............................................................AAC------GAGATTCGTCTTATCCATGTGGTC......................................................................................................................................................................................................................................2711.00100100000000
..........................................................................................................................TTGAAAACGACCCTAACATG.......................................................................................................................................................................................2011.00100000000001
.......ATTAGAAC-------T-AGCTTCGTGTGATGAC.............................................................................................................................................................................................................................................................................................2511.00100100000000
.........................................ATTTGTTAG-TTTGCCAAATCAAC------..............................................................................................................................................................................................................................................................2311.00100000010000
.......ATTAGAAC-------T-AGCTTCGTGTG..................................................................................................................................................................................................................................................................................................2011.00100000010000
........................................................................AGATTCGTCTTATCCATGTGGTCATGT..................................................................................................................................................................................................................................2711.00101000000000
..........................................................................ATTCGTCTTATCCATGTGGT.......................................................................................................................................................................................................................................2011.00101000000000
......CATTAGAAC-------T-AGCTTCGTGT...................................................................................................................................................................................................................................................................................................2011.00100000010000
......................................................................................................................CACATTGAAAACGACCCTAACATGA......................................................................................................................................................................................2511.00101000000000
................................................................................................................................ACGACCCTAACATGA......................................................................................................................................................................................1511.00100000000001
...............................................................................................................ATTTGCTCACATTGAAAACGACCCT.............................................................................................................................................................................................2511.00101000000000
.....................................................TGCCAAATCAAC------GAGATTCGTCTT..................................................................................................................................................................................................................................................2411.00100000010000
.......................................................................................................................ACATTGAAAACGACCCTAAC..........................................................................................................................................................................................2011.00100000100000
.....................................................................................................................................................................................................................................................................................GATTCGTCCGTTCTTGCTTCGACGCCT.....................2711.00101000000000
.................................................................................................................TTGCTCACATTGAAAACGACCCTAAC..........................................................................................................................................................................................2611.00101000000000
...................................................................................ATCCATGTGGTCATGTT----CTTACC.......................................................................................................................................................................................................................2311.00100100000000
.......................................................................................................................ACATTGAAAACGACCCTAACATGA......................................................................................................................................................................................2411.00100100000000
....CACATTAGAAC-------T-AGCTTCGTGT...................................................................................................................................................................................................................................................................................................2211.00100000010000
...............................................................................................ATGTT----CTTACCAATTTGCTCACATTG........................................................................................................................................................................................................2611.00101000000000
................................................................................................................................................................................................................................................................................................................CAAGAAGGAGGTGGAAAAACA2111.00100000010000
.................................................................................................................TTGCTCACATTGAAAACGACCC..............................................................................................................................................................................................2211.00100100000000
.............AC-------T-AGCTTCGTGTGATGACAATTTGT......................................................................................................................................................................................................................................................................................2611.00100000010000
..............................................................................................CATGTT----CTTACCAATTTGCTCAC............................................................................................................................................................................................................2311.00100000010000
.TGTCACATTAGAAC-------T-AGCTTCGTGT...................................................................................................................................................................................................................................................................................................2511.00100000010000
.........................................ATTTGTTAG-TTTGCCAAAT........................................................................................................................................................................................................................................................................1911.00101000000000
.............................................................CAAC------GAGATTCGTCTTATCCATGTGGT.......................................................................................................................................................................................................................................2711.00100100000000
...................................................TTTGCCAAATCAAC------GAGATTCGTC....................................................................................................................................................................................................................................................2411.00100100000000
........TTAGAAC-------T-AGCTTCGTGT...................................................................................................................................................................................................................................................................................................1811.00100001000000
..........................CTTCGTGTGATGACAATTTGTTAG-TT................................................................................................................................................................................................................................................................................2611.00101000000000
...................................ATGACAATTTGTTAG-TTTGCCAAAT........................................................................................................................................................................................................................................................................2511.00101000000000
.......ATTAGAAC-------T-AGCTTCGTGTGA.................................................................................................................................................................................................................................................................................................2111.00100000100000
..........................................................AATCAAC------GAGATTCGTCTTATCC..............................................................................................................................................................................................................................................2311.00100100000000
droEug1
GTGTCACATTTAAAT---G---T-AGCCTCGTGTGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGCTCAGGTT----CTTATCAGGCTGCTCACATTGAAAACGCCCCTAACACAATTGCATTTA-TAGC-C-----------------TATT-CTTTA--TAATTTCAAA------TTTA----AAT-G--CGCAGTAATCAG---------CAT----A---TTGCTTTTGTTTT--TCCGTACAGGTGATTCGTCCGTTCCTACTTCGACGTCTCAAGAAGGAGGTTGAAAAACASizeHit CountTotal NormTotal
No Reads
droBia1
GTGTCACATTAAAAC---A---T-AGCCTCGTGTGACGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGTCAAGAT----CTAACC-AGTTGCTCACATTGAAAACGCCCCTGACACGACCATCTTTA-CAAA-A-----------------AGTT-CTCCG--TAATTTCAAA------CT-A----AAT-G--CGCAGTAATTAG---------CAT----A---TTCCTCTTATTTT--TCCATACAGGTAATTCGTCCGTTCCTACTTCGACGCCTCAAGAAGGAGGTGGAAAAACASizeHit CountTotal NormTotal
No Reads
droTak1
GTGTCACATTAAAAC---A---T-AGCATCGTGTGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGCCAAGAA----CTAACCAAGTTGCTCACATTGAAAACGCCCCTAACACGACAGCCCTTT-TAAA-A-----------------TATT-TCCCG--TAGTTACAAA------CT-A----AAT-G--CGCAGTAATTAG---------CAT----A---TTGCTTTTGTTTT--TCCCTACAGGTGATTCGTCCGTTCCTACTTCGTCGCCTCAAGAAGGAGGTGGAAAAACASizeHit CountTotal NormTotal
No Reads
droEle1
GTGTCACTTTGATAT---T---T-AGCCTCATGTGATGACAATTTGTCAG-TTTGCCAGATAAAG------GAGATGCGTCTTATCCATGTGGTCAAGTT----CACACCATGTTGCTCACATTGAAAACGCCCCTAACACCATATT---TT-TATA-AC-----------------AT-ATTCCA--TAATTTCAAA------CT-A----AAT-G--CGCAGTAATTAG---------CAT----A---TTGCCCTTATTCT--TCCGTGCAGGTGATTCGTCCGTTCCTACTTCGACGCCTCAAGAAGGAGGTGGAAAAACASizeHit CountTotal NormTotal
No Reads
droRho1
GTGTCACTTTGATAT---T---T-AGCCTCAAGTGATGACAATTTGTTAG-TTTGCCAGATCAAG------GAGATGCGTCTTATCCATGTGGTCAAATT----TTAACCAAGTTGCTCACATTGAAAACGCCCCTAACACCACCATATTAAA-CAA-A-----------------TATT-TTCCG--TAATTTCAAA------CT-A----AAT-G--CGCAGTAAATAG---------CAT----A---TTGTCTTTGTTTT--TACGTGCAGGTGATTCGTCCTTTCCTACTTCGACGCCTCAAGAAGGAGGTGGAAAAGCASizeHit CountTotal NormTotal
No Reads
droFic1
GTGTCACATTAAAT----A---T-ATCCTCGTGTGATGACAATTTGTTAG-TTTGCCAGATTAAG------GGGGTGCGTCTTATCCATGTGGTCAAGTT----TCCATCAAGCTGTTCACATTGAAAACGCACCTGACAGGATTAT--TAGT--AAAA------------------ATT-TCCCT--TCATTTCAAA------CT-A----AAT-G--CGCAGTAATTAG---------CAT----A---TTGCACTTGTTTC--TCCGTGCAGGTGATTCGTCCGTTCCTACTTCGACGCCTTAAAAAGGAGGTGGAAAAACASizeHit CountTotal NormTotal
No Reads
droKik1
GTGTCACATTGATTT-------TACACCTCGTGTGATGACAATTTGTTAG-TTTGCCAAAGGAAA------GAGTGGCGTCTTATCCATGTTCTCAATTTTAACCC--TCAAGTTGATCACATTGAAAATGCTTCTTACACCACCTTT--ACT--TA-TGAT--------------TCATA-ACCT--TAATTTCAAA------CT-A----AAT-G--CGCAGTAATTAG---------CAT----A---TTGCAATTGTTTA--TCCCTGCAGGTGATTCGTCCCTTCCTACTCCGACGCCTCAAGAAGGAGGTGGAGAAGCASizeHit CountTotal NormTotal
No Reads
droAna3
GTGTCACAT---------A---T-TGCCTCGTGTGATGACACTGTTTTAG-TTTGCCAGATCGAA------GAGGTGCGTCGTGTCCGTGTGGTCTTATC----CCTAGCCAATAGATTGCATAGAATTAGCATCAAACATGTGGTTTACATT--CA-AG------------------TTT-TCAC--AA---------------------------------------------------------------CCTCTTCTTTC--TCCTTACAGGTGATTCGTCCCTTCCTGCTGCGTCGCCTCAAGAAGGAGGTGGAGAAACASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................AATTAGCATCAAACATGTG.....................................................................................................................................................................................1912.002000002
....................................................TTGCCAGATCGAA------GAGGTGC.......................................................................................................................................................................................................................................................2011.001010000
.................................................................................................................................................................................................................................................................................AGGTGATTCGTCCCTTCCTGCTGCGT..........................2611.001000001
....................................................TTGCCAGATCGAA------GAGGTGCGTC....................................................................................................................................................................................................................................................2311.001010000
..........................................................................................................................................................................................................................................................................................GTCCCTTCCTGCTGCGTCGC.......................2011.001100000
..........................................................................................................................................................................................................................................................................................GTCCCTTCCTGCTGCGTCGCCTCAA..................2511.001100000
.....................................................TGCCAGATCGAA------GAGGTGCGTCGTGTCC..............................................................................................................................................................................................................................................2811.001100000
...............................................TAG-TTTGCCAGATCGAA------GAGGT.........................................................................................................................................................................................................................................................2211.001001000
droBip1
GTGTCACACT------------C-TGCCCCAAGTGATGACACTGTTTTAG-TTTGCCAGATCGAT------GAGGTGCGTC-TATCCATGTGGTCTTGCC----CTAGCC-TATAGATTACGTTGAATTAGCATCAGACATTACCACA--A------------------------------------------------------------------------------------------------------CCTCTCCTTTA--TCCTTGCAGGTGATTCGTCCTTTCCTGCTGCGTCGCCTCAAGAAGGAGGTGGAGAAACASizeHit CountTotal NormTotal
No Reads
dp5
GTGTCACATTGAAAC---A---C-AGCCTCATGTGATGACAATTTGTTAG-TTTGCTAGATCAAGTGG-GAACGGGGCGTCTTATCCATGTGGTTGGTCT----ATGACCAAGCTAATCACATTGAAAACGCTCCTTACACGACCTCACCGC---TA-TGATAGCAGCACTAAGCA--CTA-TCCTCCTAGTTTTAAG------CT-T----AATCT--CGCTGTAATTGA---------CAC----TTTTTCGTCCTTGTGTG--TCCTTGCAGGTGATTCGGCCGTTCCTGCTGCGACGCCTCAAGAAGGAGGTGGAGAAGCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................AACGGGGCGTCTTATCCATGTGGT.......................................................................................................................................................................................................................................24221.5043020112316000
....................................................TTGCTAGATCAAGTGG-GAACGGG.........................................................................................................................................................................................................................................................23217.503502060211005
....................................................TTGCTAGATCAAGTGG-GAACGG..........................................................................................................................................................................................................................................................22216.003202050502000
.........................................................................................................................ATTGAAAACGCTCCTTACACGA......................................................................................................................................................................................22116.001601510000000
....................................................TTGCTAGATCAAGTGG-GAACGGGG........................................................................................................................................................................................................................................................24213.002601340205002
......................................................................AACGGGGCGTCTTATCCATGTGG........................................................................................................................................................................................................................................2329.501901310005000
........................................................................................................................CATTGAAAACGCTCCTTACACGA......................................................................................................................................................................................2319.0090810000000
....................................................TTGCTAGATCAAGTGG-GAACGGGGC.......................................................................................................................................................................................................................................................2528.50170941000003
....................................................TTGCTAGATCAAGTGG-GAACGGGGCGTC....................................................................................................................................................................................................................................................2825.00100620001001
.....................................................TGCTAGATCAAGTGG-GAACGGG.........................................................................................................................................................................................................................................................2225.00100900001000
.....................................................TGCTAGATCAAGTGG-GAACGG..........................................................................................................................................................................................................................................................2124.5090800000001
....................................................TTGCTAGATCAAGTGG-GA..............................................................................................................................................................................................................................................................1824.5090600300000
...........................................................................................................................TGAAAACGCTCCTTACACGA......................................................................................................................................................................................2014.0040400000000
....................................................TTGCTAGATCAAGTGG-GAA.............................................................................................................................................................................................................................................................1923.5070420100000
.....................................................................................................................TCACATTGAAAACGCTCCTTAC..........................................................................................................................................................................................2213.0030200001000
...................................................TTTGCTAGATCAAGTGG-GAACGG..........................................................................................................................................................................................................................................................2323.0060600000000
....................................................TTGCTAGATCAAGTGG-GAACG...........................................................................................................................................................................................................................................................2122.5050400100000
....................................................TTGCTAGATCAAGTGG-GAACGGGGCGT.....................................................................................................................................................................................................................................................2722.5050400001000
....................................................................................................................ATCACATTGAAAACGCTCCTTACACGAC.....................................................................................................................................................................................2812.0020000000002
.......................................................................ACGGGGCGTCTTATCCATGTGGT.......................................................................................................................................................................................................................................2322.0040400000000
..............................................................................GTCTTATCCATGTGGTTGGTCT----ATGAC........................................................................................................................................................................................................................2712.0020100100000
.....................................................TGCTAGATCAAGTGG-GAACGGGGCGTC....................................................................................................................................................................................................................................................2722.0040200002000
.............................................................................................................................AAAACGCTCCTTACACGA......................................................................................................................................................................................1812.0020200000000
......................................................................AACGGGGCGTCTTATCCATGTG.........................................................................................................................................................................................................................................2222.0040100012000
......................................................................AACGGGGCGTCTTATCCATGTGGTT......................................................................................................................................................................................................................................2522.0040101002000
.....................................................TGCTAGATCAAGTGG-GAACGGGGC.......................................................................................................................................................................................................................................................2421.5030200100000
....CACATTGAAAC---A---C-AGCCTCATGT...................................................................................................................................................................................................................................................................................................2321.5030020100000
...................................................TTTGCTAGATCAAGTGG-GAACGGGG........................................................................................................................................................................................................................................................2521.5030210000000
.....................................................TGCTAGATCAAGTGG-GAACGGGG........................................................................................................................................................................................................................................................2321.5030300000000
....................................................TTGCTAGATCAAGTGG-GAAC............................................................................................................................................................................................................................................................2021.5030210000000
...................................................TTTGCTAGATCAAGTGG-GAACGGGGC.......................................................................................................................................................................................................................................................2621.5030210000000
.......................................................................................................................ACATTGAAAACGCTCCTTACACGA......................................................................................................................................................................................2411.0010100000000
.....................................................................................................................TCACATTGAAAACGCTCCTTACA.........................................................................................................................................................................................2311.0010000100000
..................................................................................................................................................................................................................................................................................................................AGAAGGAGGTGGAGAAGCA1911.0010100000000
.......................................................................................................................................................................................................................................................................................TTCGGCCGTTCCTGCTGCGACG........................2211.0010100000000
....................................................................................................................ATCACATTGAAAACGCTCCTTACACGA......................................................................................................................................................................................2711.0010010000000
...........................................................ATCAAGTGG-GAACGGGGC.......................................................................................................................................................................................................................................................1821.0020110000000
.....................................................................................................................................................................................................................................................................GTG--TCCTTGCAGGTGATTCGGCCGTTCCT.................................2911.0010000001000
................................................AG-TTTGCTAGATCAAGTGG-................................................................................................................................................................................................................................................................1921.0020200000000
.........................................................................................................................................................................................................................................................................................CGGCCGTTCCTGCTGCGAC.........................1911.0010000100000
.....................................................................................................................TCACATTGAAAACGCTCCTTACACGAC.....................................................................................................................................................................................2711.0010010000000
...................................................TTTGCTAGATCAAGTGG-GAACG...........................................................................................................................................................................................................................................................2221.0020200000000
........................................................................................................................CATTGAAAACGCTCCTTACA.........................................................................................................................................................................................2011.0010100000000
......................................................................AACGGGGCGTCTTATCCATG...........................................................................................................................................................................................................................................2021.0020200000000
......................................................................................................................CACATTGAAAACGCTCCTTACA.........................................................................................................................................................................................2211.0010100000000
.............AC---A---C-AGCCTCATGTGATGACA............................................................................................................................................................................................................................................................................................2121.0020000000020
...........................................................................................................ACCAAGCTAATCACATTGAAAACGCTCCT.............................................................................................................................................................................................2911.0010100000000
....................................................TTGCTAGATCAAGTGG-GAACGGGGCG......................................................................................................................................................................................................................................................2621.0020200000000
..........................................................................................................................TTGAAAACGCTCCTTACACG.......................................................................................................................................................................................2011.0010100000000
...................................................TTTGCTAGATCAAGTGG-GAACGGGGCGT.....................................................................................................................................................................................................................................................2821.0020200000000
......CATTGAAAC---A---C-AGCCTCATGT...................................................................................................................................................................................................................................................................................................2121.0020110000000
.................................................................................................................CTAATCACATTGAAAACGCTCCT.............................................................................................................................................................................................2311.0010100000000
.........................................................................................................................ATTGAAAACGCTCCTTACA.........................................................................................................................................................................................1911.0010000100000
......................................................................................................................................CTTACACGACCTCACCGC---TA-.......................................................................................................................................................................2011.0010000100000
.....................................................................................................................TCACATTGAAAACGCTCCTTACACGA......................................................................................................................................................................................2611.0010100000000
...................................................TTTGCTAGATCAAGTGG-GAAC............................................................................................................................................................................................................................................................2121.0020200000000
.....ACATTGAAAC---A---C-AGCCTCATGT...................................................................................................................................................................................................................................................................................................2220.5010100000000
...........................................................................GGCGTCTTATCCATGTGGTTGGTCT----.............................................................................................................................................................................................................................2520.5010100000000
.....................................................TGCTAGATCAAGTGG-GAAC............................................................................................................................................................................................................................................................1920.5010000001000
.......................................................CTAGATCAAGTGG-GAACGGGG........................................................................................................................................................................................................................................................2120.5010010000000
.......................................................................ACGGGGCGTCTTATCCATGTGG........................................................................................................................................................................................................................................2220.5010100000000
.............................................................................CGTCTTATCCATGTGGTTGG....................................................................................................................................................................................................................................2020.5010000100000
.....................................................TGCTAGATCAAGTGG-GAACGGGGA.......................................................................................................................................................................................................................................................2420.5010000100000
....................................................TTGCTAGATCAAGTGG-GAACGGGGA.......................................................................................................................................................................................................................................................2520.5010000000001
................................................................GTGG-GAACGGGGCGTCTTATCC..............................................................................................................................................................................................................................................2220.5010010000000
................................................AG-TTTGCTAGATCAAGTG..................................................................................................................................................................................................................................................................1820.5010100000000
.............................................................................CGTCTTATCCATGTGGTTGGTCT----.............................................................................................................................................................................................................................2320.5010000100000
......................................................................AACGGGGCGTCTTATCCATGTGGC.......................................................................................................................................................................................................................................2420.5010001000000
..............C---A---C-AGCCTCATGTGATGAC.............................................................................................................................................................................................................................................................................................1920.5010000100000
...................................................................G-GAACGGGGCGTCTTATCCA.............................................................................................................................................................................................................................................2020.5010100000000
.............................................................CAAGTGG-GAACGGGGCGTCTTATCCA.............................................................................................................................................................................................................................................2620.5010010000000
.................................................G-TTTGCTAGATCAAGTGG-GAACGGGG........................................................................................................................................................................................................................................................2620.5010000001000
.........................................................AGATCAAGTGG-GAACGGGGC.......................................................................................................................................................................................................................................................2020.5010100000000
....................................................TTGCTAGATCAAGTGG-GAACGGGGCGTCT...................................................................................................................................................................................................................................................2920.5010010000000
..............................................................AAGTGG-GAACGGGGCGTC....................................................................................................................................................................................................................................................1820.5010100000000
....................................................TTGCTAGATCAAGTGG-GAACGGC.........................................................................................................................................................................................................................................................2320.5010010000000
......................................................................AACGGGGCGTCTTATCCATGT..........................................................................................................................................................................................................................................2120.5010100000000
...........................................................ATCAAGTGG-GAACGGGGCGTCT...................................................................................................................................................................................................................................................2220.5010010000000
...................................................TTTGCTAGATCAAGTGG-GAACGGG.........................................................................................................................................................................................................................................................2420.5010100000000
......................................................GCTAGATCAAGTGG-GAACGGG.........................................................................................................................................................................................................................................................2120.5010100000000
................................................AG-TTTGCTAGATCAAGTGG-GAACGGGGC.......................................................................................................................................................................................................................................................2820.5010010000000
..................................GATGACAATTTGTTAG-TTTGCTAGATC.......................................................................................................................................................................................................................................................................2720.5010010000000
.........................................................................GGGGCGTCTTATCCATGTGGTTGGTC..................................................................................................................................................................................................................................2620.5010000100000
.......................................................................ACGGGGCGTCTTATCCATG...........................................................................................................................................................................................................................................1920.5010100000000
...................................................TTTGCTAGATCAAGTGG-GAA.............................................................................................................................................................................................................................................................2020.5010100000000
.....................................................................GAACGGGGCGTCTTATCCATGTG.........................................................................................................................................................................................................................................2320.5010010000000
.....................................................TGCTAGATCAAGTGG-GAA.............................................................................................................................................................................................................................................................1820.5010100000000
............................................................................GCGTCTTATCCATGTGGTTGGTC..................................................................................................................................................................................................................................2320.5010010000000
.................................................G-TTTGCTAGATCAAGTGG-G...............................................................................................................................................................................................................................................................1920.5010100000000
..GTCACATTGAAAC---A---C-AGCCTCA......................................................................................................................................................................................................................................................................................................2220.5010000100000
..............C---A---C-AGCCTCATGTGATGACA............................................................................................................................................................................................................................................................................................2020.5010000100000
........................................................................CGGGGCGTCTTATCCATGTGGTTGGTC..................................................................................................................................................................................................................................2720.5010001000000
.................................................G-TTTGCTAGATCAAGTGG-GAACGG..........................................................................................................................................................................................................................................................2420.5010100000000
......................................................GCTAGATCAAGTGG-GAACGGGGC.......................................................................................................................................................................................................................................................2320.5010010000000
..............................................................................GTCTTATCCATGTGGTTGG....................................................................................................................................................................................................................................1920.5010100000000
.................................................G-TTTGCTAGATCAAGTGG-GAACG...........................................................................................................................................................................................................................................................2320.5010100000000
..........................................................GATCAAGTGG-GAACGGGGC.......................................................................................................................................................................................................................................................1920.5010000001000
............................................................TCAAGTGG-GAACGGGGCGT.....................................................................................................................................................................................................................................................1920.5010100000000
.....................................................TGCTAGATCAAGTGG-GAACGGGGCG......................................................................................................................................................................................................................................................2520.5010100000000
..................................................................................TATCCATGTGGTTGGTCT----.............................................................................................................................................................................................................................1820.5010000100000
..................................GATGACAATTTGTTAG-TTTGCTAG..........................................................................................................................................................................................................................................................................2420.5010000001000
.......................................................................ACGGGGCGTCTTATCCATGTGGTT......................................................................................................................................................................................................................................2420.5010100000000
................................................AG-TTTGCTAGATCAAGTGG-GAA.............................................................................................................................................................................................................................................................2220.5010100000000
.....ACATTGAAAC---A---C-AGCCTCATGTGATGACA............................................................................................................................................................................................................................................................................................2920.5010100000000
...................................................TTTGCTAGATCAAGTGG-GAACGGGGCG......................................................................................................................................................................................................................................................2720.5010100000000
...............................................TAG-TTTGCTAGATCAAGTGA-................................................................................................................................................................................................................................................................2020.5010100000000
...................................................TTTGCTAGATCAAGTGG-GAG.............................................................................................................................................................................................................................................................2020.5010100000000
.................................................G-TTTGCTAGATCAAGTGG-................................................................................................................................................................................................................................................................1820.5010100000000
...............................................TAG-TTTGCTAGATCAAGTG..................................................................................................................................................................................................................................................................1920.5010100000000
droPer2
GTGTCACATTGAAAC---A---C-TGCCTCATGTGATGACAATTTGTTAG-TTTGCTAGATCAAGTGG-GAACGGGGCGTCTTATCCATGTGGTTGGTCT----ATAACCAAGCTAATCACATTGAAAACGCTCCTTACACGACCTCACCGC---TA-TGATAGCAGCACTAAGCA--CTA-TAATCCTAGTTTTAAG------CT-T----AATAT--CGCTGTAATTGA---------CAC----TTTTTCGTCGTTGTGTG--TCCTTGCAGGTGATTCGGCCGTTCCTGCTGCGACGCCTCAAGAAGGAGGTGGAGAAGCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................................................................................................ATTGAAAACGCTCCTTACACGA......................................................................................................................................................................................22111.0011262100
........................................................................................................................CATTGAAAACGCTCCTTACACGAC.....................................................................................................................................................................................24110.00101000000
........................................................................................................................CATTGAAAACGCTCCTTACACGA......................................................................................................................................................................................2317.007430000
....................................................TTGCTAGATCAAGTGG-GAACGGG.........................................................................................................................................................................................................................................................2336.67200164000
.........................................................................................................................ATTGAAAACGCTCCTTACACGAC.....................................................................................................................................................................................2315.005410000
....................................................TTGCTAGATCAAGTGG-GAACGG..........................................................................................................................................................................................................................................................2234.33130130000
...........................................................................................................................TGAAAACGCTCCTTACACGA......................................................................................................................................................................................2014.004040000
...................................................TTTGCTAGATCAAGTGG-GAACGGG.........................................................................................................................................................................................................................................................2434.00120120000
..........................................................................................................................TTGAAAACGCTCCTTACACGA......................................................................................................................................................................................2114.004040000
......................................................................AACGGGGCGTCTTATCCATGTGGT.......................................................................................................................................................................................................................................2433.3310050131
.....................................................TGCTAGATCAAGTGG-GAACGGG.........................................................................................................................................................................................................................................................2233.009090000
....................................................TTGCTAGATCAAGTGG-GAACGGGG........................................................................................................................................................................................................................................................2432.678061001
..GTCACATTGAAAC---A---C-TGCCT........................................................................................................................................................................................................................................................................................................2022.505401000
............................................................................................................................GAAAACGCTCCTTACACGA......................................................................................................................................................................................1912.002020000
.....................................................TGCTAGATCAAGTGG-GAACGGGGC.......................................................................................................................................................................................................................................................2432.006121002
.....................................................................................................................TCACATTGAAAACGCTCCTTACACGA......................................................................................................................................................................................2612.002020000
......................................................GCTAGATCAAGTGG-GAACGGGG........................................................................................................................................................................................................................................................2231.675000005
....................................................TTGCTAGATCAAGTGG-GAA.............................................................................................................................................................................................................................................................1931.675040001
...................................................TTTGCTAGATCAAGTGG-GAACGGGG........................................................................................................................................................................................................................................................2531.675050000
.....................................................TGCTAGATCAAGTGG-GAACGGGGCGTC....................................................................................................................................................................................................................................................2731.675050000
.....................................................TGCTAGATCAAGTGG-GAACGG..........................................................................................................................................................................................................................................................2131.334040000
....................................................TTGCTAGATCAAGTGG-GAACGGGGCGT.....................................................................................................................................................................................................................................................2731.334040000
.......................................................................................................................ACATTGAAAACGCTCCTTACACGA......................................................................................................................................................................................2411.001010000
.....................................................................................................................TCACATTGAAAACGCTCCTTAC..........................................................................................................................................................................................2211.001010000
..................................GATGACAATTTGTTAG-TTTGCTAG..........................................................................................................................................................................................................................................................................2431.003003000
......................................................................AACGGGGCGTCTTATCCATGTGG........................................................................................................................................................................................................................................2331.003000102
........TTGAAAC---A---C-TGCCTCATGT...................................................................................................................................................................................................................................................................................................1921.002010001
.........................................................................................................................ATTGAAAACGCTCCTTACACGACCT...................................................................................................................................................................................2511.001100000
..................................................................................................................................................................................................................................................................................GGTGATTCGGCCGTTCCTGCTGC............................2311.001010000
..........................................................GATCAAGTGG-GAACGGGG........................................................................................................................................................................................................................................................1831.003000003
....................................................TTGCTAGATCAAGTGG-GAACGGGGCG......................................................................................................................................................................................................................................................2631.003030000
................................................................................................................................................................................................................................................................................................................CAAGAAGGAGGTGGAGAAGC.2011.001010000
..............................................................................................................................AAACGCTCCTTACACGAC.....................................................................................................................................................................................1811.001100000
..............................................................................................................................................................................................................................................................................................GTTCCTGCTGCGACGCCTCAAGAAGGA............2711.001001000
....................................................TTGCTAGATCAAGTGG-GA..............................................................................................................................................................................................................................................................1831.003210000
......................................................................................................................CACATTGAAAACGCTCCTTAC..........................................................................................................................................................................................2111.001010000
....................................................TTGCTAGATCAAGTGG-GAACGGGGC.......................................................................................................................................................................................................................................................2531.003020001
..............................................................................................................AAGCTAATCACATTGAAAACG..................................................................................................................................................................................................2111.001001000
....................................................................................................................ATCACATTGAAAACGCTCCTTACACGA......................................................................................................................................................................................2711.001010000
.....................................................................................................................................................................................................................................................................................GATTCGGCCGTTCCTGCTGCGACGCCT.....................2711.001100000
......................................................................................................................CACATTGAAAACGCTCCTTACACGA......................................................................................................................................................................................2511.001010000
......................................................................................................................................................................................................................................................................................ATTCGGCCGTTCCTGCTGC............................1911.001100000
.............................................................................................................................AAAACGCTCCTTACACGA......................................................................................................................................................................................1811.001010000
.....................................................TGCTAGATCAAGTGG-GAACGGGG........................................................................................................................................................................................................................................................2331.003030000
....................................................TTGCTAGATCAAGTGG-GAACG...........................................................................................................................................................................................................................................................2131.003021000
.......................................CAATTTGTTAG-TTTGCTAGAT........................................................................................................................................................................................................................................................................2130.672200000
....................................................TTGCTAGATCAAGTGG-GAACGGGGCGTC....................................................................................................................................................................................................................................................2830.672020000
.............................................GTTAG-TTTGCTAGATCAAGT...................................................................................................................................................................................................................................................................2030.672100001
...................................................TTTGCTAGATCAAGTGG-GAACGGGGC.......................................................................................................................................................................................................................................................2630.672010010
...................................................TTTGCTAGATCAAGTGG-GAA.............................................................................................................................................................................................................................................................2030.672020000
...................................................TTTGCTAGATCAAGTGG-GAACGGGGCGT.....................................................................................................................................................................................................................................................2830.672020000
........................................AATTTGTTAG-TTTGCTAG..........................................................................................................................................................................................................................................................................1830.672200000
.....................................................TGCTAGATCAAGTGG-GAACG...........................................................................................................................................................................................................................................................2030.672020000
........................................AATTTGTTAG-TTTGCTAGATC.......................................................................................................................................................................................................................................................................2130.672200000
..........................................................GATCAAGTGG-GAACGGGGC.......................................................................................................................................................................................................................................................1930.672010001
........................................AATTTGTTAG-TTTGCTAGATCAAGT...................................................................................................................................................................................................................................................................2530.672200000
......................................................GCTAGATCAAGTGG-GAACGG..........................................................................................................................................................................................................................................................2030.672010001
...........................................................................GGCGTCTTATCCATGTGGTT......................................................................................................................................................................................................................................2030.672011000
.....................................................TGCTAGATCAAGTGG-GAACGGGGCGTCT...................................................................................................................................................................................................................................................2830.672010001
.....................................................TGCTAGATCAAGTGG-GAAC............................................................................................................................................................................................................................................................1930.672010001
.............AC---A---C-TGCCTCATGTGATGACA............................................................................................................................................................................................................................................................................................2120.501100000
....CACATTGAAAC---A---C-TGCCTCATGT...................................................................................................................................................................................................................................................................................................2320.501100000
.TGTCACATTGAAAC---A---C-TGCCTC.......................................................................................................................................................................................................................................................................................................2220.501010000
.............AC---A---C-TGCCTCATGTGATGAC.............................................................................................................................................................................................................................................................................................2020.501001000
..................A---C-TGCCTCATGTGATGACAATTTGTTA....................................................................................................................................................................................................................................................................................2720.501010000
.............AC---A---C-TGCCTCATGTGATGG..............................................................................................................................................................................................................................................................................................1920.501100000
.......ATTGAAAC---A---C-TGCCTCATGT...................................................................................................................................................................................................................................................................................................2020.501010000
.................................................................................TTATCCATGTGGTTGGTC..................................................................................................................................................................................................................................1830.331001000
..............................................................AAGTGG-GAACGGGGCGTC....................................................................................................................................................................................................................................................1830.331000001
............................................................................GCGTCTTATCCATGTGGTTG.....................................................................................................................................................................................................................................2030.331100000
................................................................GTGG-GAACGGGGCGTCTT..................................................................................................................................................................................................................................................1830.331010000
.....................................................TGCTAGATCAAGTGG-GAA.............................................................................................................................................................................................................................................................1830.331000001
.......................................................CTAGATCAAGTGG-GAACGG..........................................................................................................................................................................................................................................................1930.331010000
......................................ACAATTTGTTAG-TTTGCTAG..........................................................................................................................................................................................................................................................................2030.331010000
...........................................................ATCAAGTGG-GAACGGGGCGTC....................................................................................................................................................................................................................................................2130.331010000
..................................GATGACAATTTGTTAG-TTTGCTAGAT........................................................................................................................................................................................................................................................................2630.331010000
...............................................TAG-TTTGCTAGATCAAGTGG-G...............................................................................................................................................................................................................................................................2130.331001000
......................................................GCTAGATCAAGTGG-GAACGGGGCGTCT...................................................................................................................................................................................................................................................2730.331010000
.......................................................................ACGGGGCGTCTTATCCATGTGGT.......................................................................................................................................................................................................................................2330.331010000
.............................................GTTAG-TTTGCTAGATCAAGTGG-GA..............................................................................................................................................................................................................................................................2430.331010000
................................................AG-TTTGCTAGATCAAGTGG-................................................................................................................................................................................................................................................................1930.331010000
......................................................GCTAGATCAAGTGG-GAACGGGGCGTC....................................................................................................................................................................................................................................................2630.331010000
...................................................TTTGCTAGATCAAGTGG-G...............................................................................................................................................................................................................................................................1830.331010000
...............................................TAG-TTTGCTAGATCAAGT...................................................................................................................................................................................................................................................................1830.331100000
..............................................................................GTCTTATCCATGTGGTTGGTC..................................................................................................................................................................................................................................2130.331100000
.................................................................................TTATCCATGTGGTTGGTCT----.............................................................................................................................................................................................................................1930.331010000
.........................................................AGATCAAGTGG-GAACGGGGC.......................................................................................................................................................................................................................................................2030.331001000
......................................................................AACGGGGCGTCTTATCCATGTGGC.......................................................................................................................................................................................................................................2430.331010000
...........................................TTGTTAG-TTTGCTAGATCAAGT...................................................................................................................................................................................................................................................................2230.331100000
.............................................................CAAGTGG-GAACGGGGCGTCTT..................................................................................................................................................................................................................................................2130.331010000
.............................CATGTGATGACAATTTGTTAG-T.................................................................................................................................................................................................................................................................................2230.331001000
...........................................................................GGCGTCTTATCCATGTGGTTG.....................................................................................................................................................................................................................................2130.331010000
..........................................................GATCAAGTGG-GAACGGGGCGT.....................................................................................................................................................................................................................................................2130.331000001
.....................................................TGCTAGATCAAGTGG-GAACGGGGCG......................................................................................................................................................................................................................................................2530.331000001
......................................................GCTAGATCAAGTGG-GAACGGGGC.......................................................................................................................................................................................................................................................2330.331000001
....................................TGACAATTTGTTAG-TTTGCTA...........................................................................................................................................................................................................................................................................2130.331001000
.........................................................................GGGGCGTCTTATCCATGTGGTTG.....................................................................................................................................................................................................................................2330.331001000
...................................................TTTGCTAGATCAAGTGG-GAAC............................................................................................................................................................................................................................................................2130.331010000
......................................................................AACGGGGCGTCTTATCCATGTGGTT......................................................................................................................................................................................................................................2530.331001000
...................................ATGACAATTTGTTAG-TTTG..............................................................................................................................................................................................................................................................................1930.331001000
.......................................................CTAGATCAAGTGG-GAACGGGGC.......................................................................................................................................................................................................................................................2230.331001000
.............................................GTTAG-TTTGCTAGATCAAGTGG-GAACG...........................................................................................................................................................................................................................................................2730.331000001
.....................................................TGCTAGATCAAGTGG-GAACGGGGCGT.....................................................................................................................................................................................................................................................2630.331010000
...........................................................ATCAAGTGG-GAACGGGGC.......................................................................................................................................................................................................................................................1830.331000001
........................................................................CGGGGCGTCTTATCCATGTG.........................................................................................................................................................................................................................................2030.331010000
...................................................TTTGCTAGATCAAGTGG-GA..............................................................................................................................................................................................................................................................1930.331010000
....................................TGACAATTTGTTAG-TTTGCTAGAT........................................................................................................................................................................................................................................................................2430.331100000
...................................................TTTGCTAGATCAAGTGG-GAACG...........................................................................................................................................................................................................................................................2230.331010000
.........................................................AGATCAAGTGG-GAACGGGG........................................................................................................................................................................................................................................................1930.331000001
..................................................................................TATCCATGTGGTTGGTCT----.............................................................................................................................................................................................................................1830.331100000
droWil2
GTGTCACATTCGA---------C-AACCTCATGTGAATACAATTTGTAAT-TTTGCCAGAGTAAG------GTGTAGCTTCTTATCCATGTGATAAGATT----CCTAACAAGCTAATCACTTTGACGATGTCTAAGACAG--CTTTT---------------------------------------------TCAGT------TC-AATTGAT------AAAGTGACTCA--TG-----TTT----A---TTCTCTTTGTCTGTCTTTTATTAGGTTATACGACCCTTTCTGTTGCGTCGTCTCAAAAAGGAAGTGGAGAAGCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................TTGCCAGAGTAAG------GTGTAGCTTCT...................................................................................................................................................................................................................................................24425.0010016121764
...................................................TTTGCCAGAGTAAG------GTGTAGCTTCT...................................................................................................................................................................................................................................................25418.0072111762
....................................................TTGCCAGAGTAAG------GTGTAGCTTC....................................................................................................................................................................................................................................................23410.25419100121
.....................................................TGCCAGAGTAAG------GTGTAGCTTCT...................................................................................................................................................................................................................................................2349.0036555021
.....................................................TGCCAGAGTAAG------GTGTAGCTTC....................................................................................................................................................................................................................................................2248.7535274022
....................................................TTGCCAGAGTAAG------GTGTAGCTTCTT..................................................................................................................................................................................................................................................2548.2533364614
.....................................................TGCCAGAGTAAG------GTGTAGCTTCTT..................................................................................................................................................................................................................................................2445.2521011604
.....................................................TGCCAGAGTAAG------GTGTAGCTT.....................................................................................................................................................................................................................................................2145.0020021530
.....................................................................................CCATGTGATAAGATT----CCTAACAAGC...................................................................................................................................................................................................................2515.00502030
....................................................TTGCCAGAGTAAG------GTGTAGCTTCTTAT................................................................................................................................................................................................................................................2745.002005528
.....................................................TGCCAGAGTAAG------GTGTAGCTTCTTATC...............................................................................................................................................................................................................................................2743.251301444
.....................................................TGCCAGAGTAAG------GTGTAGCT......................................................................................................................................................................................................................................................2043.001200840
....................................................TTGCCAGAGTAAG------GTGTAGCTT.....................................................................................................................................................................................................................................................2242.501005221
....................................................TTGCCAGAGTAAG------GTGTAGCTTCTTA.................................................................................................................................................................................................................................................2642.501003034
......................................................GCCAGAGTAAG------GTGTAGCTT.....................................................................................................................................................................................................................................................2042.25902520
....................................................................................TCCATGTGATAAGATT----CCTAACAAGC...................................................................................................................................................................................................................2612.00202000
.....................................................TGCCAGAGTAAG------GTGTAGCTTCTTAT................................................................................................................................................................................................................................................2642.00800602
...................................................TTTGCCAGAGTAAG------GTGTAGCTTCTT..................................................................................................................................................................................................................................................2642.00801322
....................................................TTGCCAGAGTAAG------GTGTAGCT......................................................................................................................................................................................................................................................2141.75702410
......................................................GCCAGAGTAAG------GTGTAGCTTCTT..................................................................................................................................................................................................................................................2341.50600510
.....................................................TGCCAGAGTAAG------GTGTAGC.......................................................................................................................................................................................................................................................1941.50601500
..............................................................AAG------GTGTAGCTTCTTATCCATGTG.........................................................................................................................................................................................................................................2431.33400310
......................................................GCCAGAGTAAG------GTGTAGCT......................................................................................................................................................................................................................................................1941.25501310
...................................................TTTGCCAGAGTAAG------GTGTAGCTTC....................................................................................................................................................................................................................................................2441.25500023
...........................................................................................................................................................................................................................................................................................................CGTCTCAAAAAGGAAGTGGA......2011.00100010
................................................................G------GTGTAGCTTCTTATCCATGTG.........................................................................................................................................................................................................................................2231.00302010
......................................................................................................................................................................................................................................................................................ATACGACCCTTTCTGTTGCGTC.........................2211.00101000
......................................................................................................................................................................................................................................................................................................TGCGTCGTCTCAAAAAGGAAGT.........2211.00100010
........................................AATTTGTAAT-TTTGCCAGA.........................................................................................................................................................................................................................................................................1911.00100100
............................................................................................ATAAGATT----CCTAACAAGCT..................................................................................................................................................................................................................1911.00100010
................................................................................................................................................................................................................................................................................................TTCTGTTGCGTCGTCTCAAA.................2011.00100010
..........................................................................................................................................................................................................................................................................................GACCCTTTCTGTTGCGTCGTCT.....................2211.00100100
....................................................................................TCCATGTGATAAGATT----CCTAACAAGCT..................................................................................................................................................................................................................2711.00100010
...........................................................................................................................TGACGATGTCTAAGACAG--CT....................................................................................................................................................................................2011.00100010
.....................................................................................CCATGTGATAAGATT----CCTAA........................................................................................................................................................................................................................2011.00101000
...............................................AAT-TTTGCCAGAGTAAG------GTGTAGCTTCT...................................................................................................................................................................................................................................................2811.00100100
.................................................T-TTTGCCAGAGTAAG------GTGTAGCTTCTT..................................................................................................................................................................................................................................................2711.00100100
...................................................TTTGCCAGAGTAAG------GTGTAGCTT.....................................................................................................................................................................................................................................................2341.00400220
..............................................................................................................................................................................................................................................................................................................CTCAAAAAGGAAGTGGAGA....1911.00100010
........................................................CAGAGTAAG------GTGTAGCTTCT...................................................................................................................................................................................................................................................2041.00400310
........................................................CAGAGTAAG------GTGTAGCTTCTTAT................................................................................................................................................................................................................................................2341.00400400
.....................................................................................................................................................................................................................................................................................TATACGACCCTTTCTGTTGCGTC.........................2311.00100100
......................................................................................CATGTGATAAGATT----CCTAACAAGC...................................................................................................................................................................................................................2411.00100010
...............................................AAT-TTTGCCAGAGTAAG------GT............................................................................................................................................................................................................................................................1911.00100100
.............................................................TAAG------GTGTAGCTTCTTATCCATGTG.........................................................................................................................................................................................................................................2531.00300120
...................................................................................ATCCATGTGATAAGATT----CCTAACAAGC...................................................................................................................................................................................................................2711.00100010
......................C-AACCTCATGTGAATACAATTT........................................................................................................................................................................................................................................................................................2211.00101000
.........................................................AGAGTAAG------GTGTAGCTTCT...................................................................................................................................................................................................................................................1940.75300300
.........................................................AGAGTAAG------GTGTAGCTTCTTATC...............................................................................................................................................................................................................................................2340.75300210
............................................................GTAAG------GTGTAGCTTCTTA.................................................................................................................................................................................................................................................1840.75300030
........................................................CAGAGTAAG------GTGTAGCTTCTT..................................................................................................................................................................................................................................................2140.75300300
....................................................TTGCCAGAGTAAG------GTGTAGCTTCTTATC...............................................................................................................................................................................................................................................2840.75301002
........................................................CAGAGTAAG------GTGTAGCTTCTTATC...............................................................................................................................................................................................................................................2440.75300300
...................................................TTTGCCAGAGTAAG------GTGTAGCTTCTTAT................................................................................................................................................................................................................................................2840.75301101
......................................................GCCAGAGTAAG------GTGTAGCTTCTTAT................................................................................................................................................................................................................................................2540.75300210
.....................................................TGCCAGAGTAAG------GTGTAGCTTCTTA.................................................................................................................................................................................................................................................2540.75301110
............................................................GTAAG------GTGTAGCTTCTTATCCATGTG.........................................................................................................................................................................................................................................2630.67201010
....................................................TTGCCAGAGTAAG------GTGTAGCTTCTTATCC..............................................................................................................................................................................................................................................2940.50211000
...................................................TTTGCCAGAGTAAG------GTGTAGCTTCTTATC...............................................................................................................................................................................................................................................2940.50200110
..............................................................AAG------GTGTAGCTTCTTATCC..............................................................................................................................................................................................................................................1940.50200020
...................................................TTTGCCAGAGTAAG------GTGTAGCTTCTTA.................................................................................................................................................................................................................................................2740.50201001
.........................................................AGAGTAAG------GTGTAGCTTCTT..................................................................................................................................................................................................................................................2040.50200200
.............................................................TAAG------GTGTAGCTTCTTATCCATGT..........................................................................................................................................................................................................................................2430.33100010
............................................................GTAAG------GTGTAGCTTCTTATCCATGT..........................................................................................................................................................................................................................................2530.33100100
..............................................................AAG------GTGTAGCTTCTTATCCATG...........................................................................................................................................................................................................................................2230.33100100
...............................................................AG------GTGTAGCTTCTTATCCATGT..........................................................................................................................................................................................................................................2230.33100100
...........................................................AGTAAG------GTGTAGCTTCTTATCCATGTG.........................................................................................................................................................................................................................................2730.33100100
...............................................................AG------GTGTAGCTTCTTATCCATGTGA........................................................................................................................................................................................................................................2430.33100001
................................................................G------GTGTAGCTTCTTATCCATG...........................................................................................................................................................................................................................................2030.33100010
............................................................GTAAG------GTGTAGCTTCTTATCCATGTGAT.......................................................................................................................................................................................................................................2830.33100100
.......................................................................GTGTAGCTTCTTATCCATGTG.........................................................................................................................................................................................................................................2130.33100010
..............................................................AAG------GTGTAGCTTCTTATCCATGTGA........................................................................................................................................................................................................................................2530.33100010
............................................................GTAAG------GTGTAGCTTCTTATCCATG...........................................................................................................................................................................................................................................2430.33100010
..........................................................GAGTAAG------GTGTAGCTTCTTATCCATGTG.........................................................................................................................................................................................................................................2830.33100100
.....................................................TGCCAGAGTAAG------GTGTAGCTTCTTATCC..............................................................................................................................................................................................................................................2840.25100001
...................................................TTTGCCAGAGTAAG------GTGTAGC.......................................................................................................................................................................................................................................................2140.25100100
........................................................CAGAGTAAG------GTGTAGCTTCC...................................................................................................................................................................................................................................................2040.25100100
....................................................TTGCCAGAGTAAG------GTGTAG........................................................................................................................................................................................................................................................1940.25101000
......................................................GCCAGAGTAAG------GTGTAGCTTC....................................................................................................................................................................................................................................................2140.25100001
........................................................CAGAGTAAG------GTGTAGCTT.....................................................................................................................................................................................................................................................1840.25100100
......................................................GCCAGAGTAAG------GTGTAGCTTCTTA.................................................................................................................................................................................................................................................2440.25100001
......................................................GCCAGAGTAAG------GTGTAGCTTCT...................................................................................................................................................................................................................................................2240.25100001
.........................................................AGAGTAAG------GTGTAGCTTCTTA.................................................................................................................................................................................................................................................2140.25100100
....................................................TTGCCAGAGTAAG------GTGTAGC.......................................................................................................................................................................................................................................................2040.25100100
........................................................CAGAGTAAG------GTGTAGCTTCTTATCC..............................................................................................................................................................................................................................................2540.25100010
...........................................................AGTAAG------GTGTAGCTTCTTAT................................................................................................................................................................................................................................................2040.25100100
......................................................GCCAGAGTAAG------GTGTAGCTTCTTATC...............................................................................................................................................................................................................................................2640.25100100
.......................................................CCAGAGTAAG------GTGTAGCTTCTT..................................................................................................................................................................................................................................................2240.25100100
.......................................................CCAGAGTAAG------GTGTAGCTT.....................................................................................................................................................................................................................................................1940.25101000
droVir3
GTATCACATAAAATTTTTA---T-AACCTCATGTGA-GACAATTTAATAC-CTTGCTAGATTAAATTA---AAGCTGCGACTTATCCATGTGTTCGTGTC----CTTAT--AACTGATCACATTGAATACGCGCTATACACTAGTTC-TTGAA--TA-AA------------------T-A-TTCC--TAATTATAAG------T----------------CAGTAA---GCATGTTTTGATTG---T---TTATTTTTCTTTT--TTTATTCAGGTCATTCGTCCATTTCTGCTGCGTCGCCTTAAAAAGGAGGTGGAAAAGCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................................................ATTGAATACGCGCTATACACT.......................................................................................................................................................................................2117.007002000000000000003000000000000000000000000000000000000000001010
......................................................................................................................CACATTGAATACGCGCTATACACT.......................................................................................................................................................................................2417.007106000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................ATTGAATACGCGCTATACACTA......................................................................................................................................................................................2216.006004200000000000000000000000000000000000000000000000000000000000
......................................................................................................................CACATTGAATACGCGCTATACACTA......................................................................................................................................................................................2515.005003000000000000011000000000000000000000000000000000000000000000
....................................................TTGCTAGATTAAATTA---AAGCTGCGA.....................................................................................................................................................................................................................................................2524.509000010100000002100000000000000000000400000000000000000000000000
..........................................................................................................................TTGAATACGCGCTATACACTA......................................................................................................................................................................................2114.004003000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................ACATTGAATACGCGCTATACACT.......................................................................................................................................................................................2314.004002000000000000001000000000000000100000000000000000000000000000
.....................................................TGCTAGATTAAATTA---AAGCTGCG......................................................................................................................................................................................................................................................2323.507001000000000002300000000100000000000000000000000000000000000000
...................................................CTTGCTAGATTAAATTA---AAGCTGCG......................................................................................................................................................................................................................................................2523.507001000000000000500000000000000000000100000000000000000000000000
......................................................................................CATGTGTTCGTGTC----CTTAT--......................................................................................................................................................................................................................1913.003000000000000000000000000000000000000000000000000000000000000003
........................................................................................................................CATTGAATACGCGCTATACACT.......................................................................................................................................................................................2213.003001000000000000001000000000000000000000000000000000000000000010
........................................................................................................................CATTGAATACGCGCTATACACTA......................................................................................................................................................................................2313.003001100000000000000000000000000000000000000000000000000000000010
.......................................................................................................................ACATTGAATACGCGCTATACACTA......................................................................................................................................................................................2413.003003000000000000000000000000000000000000000000000000000000000000
...................................................CTTGCTAGATTAAATTA---AAGCTGCGACT...................................................................................................................................................................................................................................................2813.003000100000000000000000000000000000010000000000000000000000010000
...................................................CTTGCTAGATTAAATTA---AAGCTGCGA.....................................................................................................................................................................................................................................................2622.505002000000000000300000000000000000000000000000000000000000000000
...................................................CTTGCTAGATTAAATTA---AAGCTGC.......................................................................................................................................................................................................................................................2422.505003000000000001100000000000000000000000000000000000000000000000
....................................................TTGCTAGATTAAATTA---AAGCTGC.......................................................................................................................................................................................................................................................2322.004002000000000000000000001000000000010000000000000000000000000000
..........................................................................................................................TTGAATACGCGCTATACACT.......................................................................................................................................................................................2012.002002000000000000000000000000000000000000000000000000000000000000
..............................................................................GACTTATCCATGTGTTCGTGTC----.............................................................................................................................................................................................................................2212.002000100000000010000000000000000000000000000000000000000000000000
......................................................................................CATGTGTTCGTGTC----CTTAT--AACTGAT...............................................................................................................................................................................................................2612.002000000000000000000000000000000000000000000000000000000000000002
........................................................................AGCTGCGACTTATCCATGTGTT.......................................................................................................................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000002000
....................................................TTGCTAGATTAAATTA---AAGCT.........................................................................................................................................................................................................................................................2122.004000000000000000100000000000000000000300000000000000000000000000
..............................ATGTGA-GACAATTTAATAC-..................................................................................................................................................................................................................................................................................1912.002000000000000000000000000000000000000000000000000000000000000002
......................................................................................CATGTGTTCGTGTC----CTTAT--AACT..................................................................................................................................................................................................................2312.002000000000000000000000000000000000000000000000000000000000000002
.............................CATGTGA-GACAATTTAATAC-CTTGC.............................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................TCATTCGTCCATTTCTGCTGCG...........................2211.001100000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................AAAAAGGAGGTGGAAAAG..1811.001000000000100000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................TGCTGCGTCGCCTTAAAAAGGAGGT.........2511.001000000000000000000000000000000000000010000000000000000000000000
.........................................................................................................................ATTGAATACGCGCTATACACTAGTTC-.................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................GTGTC----CTTAT--AACTGATC..............................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000001
...................................................................A---AAGCTGCGACTTATCCATGTGTTCGTGT..................................................................................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000010
..............................................................................................CGTGTC----CTTAT--AACTGATC..............................................................................................................................................................................................................1911.001000000000000000010000000000000000000000000000000000000000000000
...............................................TAC-CTTGCTAGATTAAATTA---AAGCTGC.......................................................................................................................................................................................................................................................2711.001000000000000001000000000000000000000000000000000000000000000000
......................................................................................CATGTGTTCGTGTC----CTT..........................................................................................................................................................................................................................1711.001000000000000000000000000000000000000000000000000000000000000001
.........................................................................GCTGCGACTTATCCATGTGTT.......................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................AT--AACTGATCACATTGAATACG..................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
..............................................................................................CGTGTC----CTTAT--AACTGATCACATC.........................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................ACTTATCCATGTGTTCGTGTC----.............................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..............................................ATAC-CTTGCTAGATTAAAT...................................................................................................................................................................................................................................................................1911.001000000000000000000000000100000000000000000000000000000000000000
..............................................................................................CGTGTC----CTTAT--AACTGATCACATTGAA......................................................................................................................................................................................................2711.001000000000000000000000000000000000010000000000000000000000000000
........................................................................................................CTTAT--AACTGATCACATTGAATACGC.................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...................................................CTTGCTAGATTAAATTA---AAGCTGCGAC....................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................CATTGAATACGCGCTATACAC........................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
................................................................................CTTATCCATGTGTTCGTGTC----C............................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
...............................................TAC-CTTGCTAGATTAAATTA---AAGCTGCG......................................................................................................................................................................................................................................................2811.001000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................CATTCGTCCATTTCTGCTGC............................2011.001000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................CGTCCATTTCTGCTGCGTCGCCTTAAA.................2711.001000000000001000000000000000000000000000000000000000000000000000
.........................................................................................................................ATTGAATACGCGCTATACACTAC.....................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000001000
............................TCATGTGA-GACAATTTAATAC-CT................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TTCTGCTGCGTCGCCTTAAAAAGGAGG..........2711.001000000000000000000000000000000000000100000000000000000000000000
....................................................TTGCTAGATTAAATTA---AAGCTGCGACT...................................................................................................................................................................................................................................................2711.001000000000000000000000000000100000000000000000000000000000000000
....................................................TTGCTAGATTAAATTA---AAGCTGCGAC....................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000010000000000000000000000000
.........................................................................................................................ATTGAATACGCGCTATACA.........................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................CACATTGAATACGCGCTATACAC........................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
........................AACCTCATGTGA-GACAATTTAATAC-C.................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000001000000000000000000000000000
..........................CCTCATGTGA-GACAATTTAATAC-CTT...............................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
..................................................................TA---AAGCTGCGACTTATCCATG...........................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
................................................AC-CTTGCTAGATTAAATTA---AAGCTGCG......................................................................................................................................................................................................................................................2721.002001000000000000100000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................TTAAAAAGGAGGTGGAAAA...1911.001000000000000010000000000000000000000000000000000000000000000000
...............................TGTGA-GACAATTTAATAC-CTTGC.............................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................................GTTCGTGTC----CTTAT--AACTGATC..............................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000001
.............................................AATAC-CTTGCTAGATTAAAT...................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
........................................................TAGATTAAATTA---AAGCTGCGACTTATC...............................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................ATTGAATACGCGCTATACACTAG.....................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000001000
.......................................................................AAGCTGCGACTTATCCATGT..........................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................TTATCCATGTGTTCGTGTC----C............................................................................................................................................................................................................................2011.001000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................TGAATACGCGCTATACACT.......................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................ATTGAATACGCGCTATACAC........................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
.................................................C-CTTGCTAGATTAAATTA---AAGCTGCGAC....................................................................................................................................................................................................................................................2811.001000000000000000100000000000000000000000000000000000000000000000
..............................................................................................CGTGTC----CTTAT--AACTGATCACAT..........................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................CTTAT--AACTGATCACATTGA.......................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................CCATGTGTTCGTGTC----CTTAT--AACTGAT...............................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000001
.........................................................................................................TTAT--AACTGATCACATTGAATACGC.................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
............................................................................................................T--AACTGATCACATTGAATACGCGCTT.............................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000010000
........................................................................................................................CATTGAATACGCGCTATACACC.......................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................AACTGATCACATTGAATACGCGCTA.............................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................TAT--AACTGATCACATTGAATACGCGCT..............................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................AT--AACTGATCACATTGAATACGC.................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
........................................................................................TGTGTTCGTGTC----CTTAT--AACTGA................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................GATCACATTGAATACGCGCTATACACT.......................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................AACTGATCACATTGAATACGCGCT..............................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................CACATTGAATACGCGCTATACACTAG.....................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................GAATACGCGCTATACACTA......................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.............................................AATAC-CTTGCTAGATTAAATTA---AAGCTGC.......................................................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................CATTGAATACGCGCTATACACTAG.....................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
........................AACCTCATGTGA-GACAATTT........................................................................................................................................................................................................................................................................................2020.501000000000000001000000000000000000000000000000000000000000000000
.....................................................TGCTAGATTAAATTA---AAGCT.........................................................................................................................................................................................................................................................2020.501000000010000000000000000000000000000000000000000000000000000000
...................................................CTTGCTAGATTAAATTA---AAGCT.........................................................................................................................................................................................................................................................2220.501000000000000000100000000000000000000000000000000000000000000000
.........AAAATTTTTA---T-AACCTCATGTGA-GAC.............................................................................................................................................................................................................................................................................................2620.501000100000000000000000000000000000000000000000000000000000000000
............ATTTTTA---T-AACCTCATGTGA-GACA............................................................................................................................................................................................................................................................................................2420.501000100000000000000000000000000000000000000000000000000000000000
....................................................TTGCTAGATTAAATTA---AAGCTG........................................................................................................................................................................................................................................................2220.501100000000000000000000000000000000000000000000000000000000000000
...........AATTTTTA---T-AACCTCATGT...................................................................................................................................................................................................................................................................................................1920.501001000000000000000000000000000000000000000000000000000000000000
.................................................C-CTTGCTAGATTAAATTA---AAGCTGCG......................................................................................................................................................................................................................................................2620.501000000000000000100000000000000000000000000000000000000000000000
..................A---T-AACCTCATGTGA-GACAATTT........................................................................................................................................................................................................................................................................................2220.501000000000000001000000000000000000000000000000000000000000000000
...................................................CTTGCTAGATTAAATTA---AAG...........................................................................................................................................................................................................................................................2020.501000100000000000000000000000000000000000000000000000000000000000
....................................................TTGCTAGATTAAATTA---AAGCTGCG......................................................................................................................................................................................................................................................2420.501001000000000000000000000000000000000000000000000000000000000000
.........AAAATTTTTA---T-AACCTCATGTGA-GACA............................................................................................................................................................................................................................................................................................2720.501000000000000000001000000000000000000000000000000000000000000000
.................................................C-CTTGCTAGATTAAATTA---AAGCTGCGA.....................................................................................................................................................................................................................................................2720.501000000000000000100000000000000000000000000000000000000000000000
.....................................................TGCTAGATTAAATTA---AAGCTGCGA.....................................................................................................................................................................................................................................................2420.501000000000000000100000000000000000000000000000000000000000000000
...................................................CTTGCTAGATTAAATTA---AAGCTG........................................................................................................................................................................................................................................................2320.501001000000000000000000000000000000000000000000000000000000000000
........................................................TAGATTAAATTA---AAGCTGC.......................................................................................................................................................................................................................................................1920.501000100000000000000000000000000000000000000000000000000000000000
droMoj3
GTGTCACATTGAAT----------TATCTCATGTGATGACAATTTGTTACCCTTGCTAGAGTAAGTTGATGAAGCTGCGACTTATCCATGTGATTGAGTT----TTT-CC-AGCTGATTGCATTGAATGCGCGCTTTACATTACTTT--TATT--CA-TAT---------------ATTT-ATATA-------TCAGTATCAATTT-G----AGA-A--AGTATTAA-------------AATACCTA--------TTTCTCTT--TCTTTATAGGTTATTCGTCCATTTCTGCTGCGTCGGCTTAAAAAAGAGGTGGAGAAGCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................TTGCTAGAGTAAGTTGATGAAGCTGCGA.....................................................................................................................................................................................................................................................28154.00545000049
....................................................TTGCTAGAGTAAGTTGATGAAGCTGCG......................................................................................................................................................................................................................................................27142.00422000040
....................................................TTGCTAGAGTAAGTTGATGAAGCTGC.......................................................................................................................................................................................................................................................26142.00424032033
.........................................................................................................................ATTGAATGCGCGCTTTACATTA......................................................................................................................................................................................22139.00393300204
..........................................................................................................................TTGAATGCGCGCTTTACATTA......................................................................................................................................................................................21132.00322400008
............................................................................................................................GAATGCGCGCTTTACATTA......................................................................................................................................................................................19128.00282700001
...................................................CTTGCTAGAGTAAGTTGATGAAGCTGCG......................................................................................................................................................................................................................................................28121.00212000019
......................................................................................................................TGCATTGAATGCGCGCTTTACATTA......................................................................................................................................................................................25115.00151300002
...........................................................................................................................TGAATGCGCGCTTTACATTA......................................................................................................................................................................................20113.00131100002
...................................................CTTGCTAGAGTAAGTTGATGAAGCTGC.......................................................................................................................................................................................................................................................27113.00133000010
....................................................TTGCTAGAGTAAGTTGATGAAGCTG........................................................................................................................................................................................................................................................2519.009001107
.....................................................TGCTAGAGTAAGTTGATGAAGCTGCGA.....................................................................................................................................................................................................................................................2716.006101103
............................................................................................................................GAATGCGCGCTTTACATTAC.....................................................................................................................................................................................2016.006600000
.....................................................TGCTAGAGTAAGTTGATGAAGCTGCG......................................................................................................................................................................................................................................................2616.006000006
...................................................................................................T----TTT-CC-AGCTGATTGCATT.........................................................................................................................................................................................................1915.005500000
..................................GATGACAATTTGTTACCCTTGCTAGA.........................................................................................................................................................................................................................................................................2615.005500000
.....................................................TGCTAGAGTAAGTTGATGAAGCTGC.......................................................................................................................................................................................................................................................2515.005000104
.............................................................................................................................AATGCGCGCTTTACATTAC.....................................................................................................................................................................................1915.005500000
...................................................................................................T----TTT-CC-AGCTGATTGCATTG........................................................................................................................................................................................................2015.005500000
........................................................................................................................CATTGAATGCGCGCTTTACATTA......................................................................................................................................................................................2315.005001004
........................................................................................................................CATTGAATGCGCGCTTTACATTAC.....................................................................................................................................................................................2414.004100003
.........................................................................................................................ATTGAATGCGCGCTTTACATTAC.....................................................................................................................................................................................2314.004200101
...................................................CTTGCTAGAGTAAGTTGATGAAGC..........................................................................................................................................................................................................................................................2413.003100002
..................................GATGACAATTTGTTACCCTTGCTAG..........................................................................................................................................................................................................................................................................2513.003300000
.............................................................................................................................AATGCGCGCTTTACATTA......................................................................................................................................................................................1813.003300000
...................................................CTTGCTAGAGTAAGTTGATGAAGCT.........................................................................................................................................................................................................................................................2513.003100002
........................................AATTTGTTACCCTTGCTAG..........................................................................................................................................................................................................................................................................1913.003300000
...................................................CTTGCTAGAGTAAGTTGATG..............................................................................................................................................................................................................................................................2013.003000003
..........................................................................................................................TTGAATGCGCGCTTTACATTAC.....................................................................................................................................................................................2213.003000012
........................................AATTTGTTACCCTTGCTAGAG........................................................................................................................................................................................................................................................................2113.003300000
...................................................CTTGCTAGAGTAAGTTGATGAAGCTG........................................................................................................................................................................................................................................................2613.003100101
...................................................................................................T----TTT-CC-AGCTGATTGCATTGA.......................................................................................................................................................................................................2112.002200000
......................................................GCTAGAGTAAGTTGATGAAGCTG........................................................................................................................................................................................................................................................2312.002100001
...................................................CTTGCTAGAGTAAGTTGATGAAGCTGCGA.....................................................................................................................................................................................................................................................2912.002000002
.............................................................TAAGTTGATGAAGCTGCGACTTATCCA.............................................................................................................................................................................................................................................2712.002200000
.........................................................................................................TT-CC-AGCTGATTGCATTGAATGCGCGCT..............................................................................................................................................................................................2812.002200000
...................................................CTTGCTAGAGTAAGTTGATGAA............................................................................................................................................................................................................................................................2212.002100001
..................................................................TGATGAAGCTGCGACTTATCCATGTGA........................................................................................................................................................................................................................................2712.002200000
..................................................CCTTGCTAGAGTAAGTTGATGAAGCTGC.......................................................................................................................................................................................................................................................2812.002100001
.........................................................................................................TT-CC-AGCTGATTGCATTGAATGCGC.................................................................................................................................................................................................2512.002100100
..................................GATGACAATTTGTTACCCTTGCTAGAG........................................................................................................................................................................................................................................................................2712.002200000
......CATTGAAT----------TATCTCATGTGATGACAATTT........................................................................................................................................................................................................................................................................................2912.002200000
....................................................TTGCTAGAGTAAGTTGATG..............................................................................................................................................................................................................................................................1912.002000002
.........................................................................................................................ATTGAATGCGCGCTTTACA.........................................................................................................................................................................................1912.002200000
.......................................CAATTTGTTACCCTTGCTAGA.........................................................................................................................................................................................................................................................................2112.002200000
.........................................................................................................TT-CC-AGCTGATTGCATTGAATGCGCGC...............................................................................................................................................................................................2712.002200000
.......ATTGAAT----------TATCTCATGTGATGAC.............................................................................................................................................................................................................................................................................................2312.002200000
.................................................................................................GTT----TTT-CC-AGCTGATTGCATT.........................................................................................................................................................................................................2112.002200000
...................................................................................................T----TTT-CC-AGCTGATTGCATTGAATGC...................................................................................................................................................................................................2512.002200000
.........................................................................................................TT-CC-AGCTGATTGCATTGAATGCG..................................................................................................................................................................................................2412.002200000
......................................................GCTAGAGTAAGTTGATGAAGCTGC.......................................................................................................................................................................................................................................................2412.002200000
....................................................TTGCTAGAGTAAGTTGATGA.............................................................................................................................................................................................................................................................2012.002000002
..................................................................TGATGAAGCTGCGACTTATC...............................................................................................................................................................................................................................................2012.002200000
.........................................ATTTGTTACCCTTGCTAGAGTAAG....................................................................................................................................................................................................................................................................2412.002200000
......CATTGAAT----------TATCTCATGTG..................................................................................................................................................................................................................................................................................................1912.002200000
..............................................................................GACTTATCCATGTGATTGAGT..................................................................................................................................................................................................................................2112.002200000
........................................................................AGCTGCGACTTATCCATGTGATTGA....................................................................................................................................................................................................................................2512.002200000
............AT----------TATCTCATGTGATGACAATTT........................................................................................................................................................................................................................................................................................2312.002200000
...............................................................................................................AGCTGATTGCATTGAATGCGCGC...............................................................................................................................................................................................2312.002200000
....................................................TTGCTAGAGTAAGTTGATGAA............................................................................................................................................................................................................................................................2112.002000002
........................................AATTTGTTACCCTTGCTAGAGT.......................................................................................................................................................................................................................................................................2212.002200000
......................................................GCTAGAGTAAGTTGATGAA............................................................................................................................................................................................................................................................1912.002200000
...................................................CTTGCTAGAGTAAGTTGATGA.............................................................................................................................................................................................................................................................2112.002000002
......CATTGAAT----------TATCTCATGTGATGACA............................................................................................................................................................................................................................................................................................2512.002200000
........................................AATTTGTTACCCTTGCTAGA.........................................................................................................................................................................................................................................................................2012.002100001
.........................................ATTTGTTACCCTTGCTAGAGT.......................................................................................................................................................................................................................................................................2112.002200000
..........................................TTTGTTACCCTTGCTAGAG........................................................................................................................................................................................................................................................................1912.002200000
......CATTGAAT----------TATCTCATGTGATGAC.............................................................................................................................................................................................................................................................................................2412.002200000
...............................................................................ACTTATCCATGTGATTGA....................................................................................................................................................................................................................................1811.001100000
.........................................................................................GTGATTGAGTT----TTT-CC-AGCTGA................................................................................................................................................................................................................2211.001100000
...................................................................GATGAAGCTGCGACTTATCCATGTGA........................................................................................................................................................................................................................................2611.001000001
...........................................................AGTAAGTTGATGAAGCTGC.......................................................................................................................................................................................................................................................1911.001100000
...........................................................................TGCGACTTATCCATGTGAT.......................................................................................................................................................................................................................................1911.001010000
...........................................................................................................................TGAATGCGCGCTTTACATTAC.....................................................................................................................................................................................2111.001100000
............................................................................................ATTGAGTT----TTT-CC-AGCTGATTGCATT.........................................................................................................................................................................................................2611.001100000
.......................................................................................................................GCATTGAATGCGCGCTTTACATTAC.....................................................................................................................................................................................2511.001000001
........................................................................................................................CATTGAATGCGCGCTTTACATTACTT...................................................................................................................................................................................2611.001100000
.....................................................TGCTAGAGTAAGTTGATGA.............................................................................................................................................................................................................................................................1911.001000001
...............................................................AGTTGATGAAGCTGCGACTTATCCA.............................................................................................................................................................................................................................................2511.001100000
.............................................................................................TTGAGTT----TTT-CC-AGCTGATTGCATT.........................................................................................................................................................................................................2511.001100000
...........AAT----------TATCTCATGTGATGAC.............................................................................................................................................................................................................................................................................................1911.001100000
.............................................................TAAGTTGATGAAGCTGCGACTT..................................................................................................................................................................................................................................................2211.001100000
.......................................CAATTTGTTACCCTTGCTAGAGT.......................................................................................................................................................................................................................................................................2311.001100000
....................................TGACAATTTGTTACCCTTGCTAGAGT.......................................................................................................................................................................................................................................................................2611.001100000
....................................................TTGCTAGAGTAAGTTGATGAAGCT.........................................................................................................................................................................................................................................................2411.001000001
.................................................................................................GTT----TTT-CC-AGCTGATTGCATTGA.......................................................................................................................................................................................................2311.001100000
....................................................................ATGAAGCTGCGACTTATCC..............................................................................................................................................................................................................................................1911.001100000
..............................................................AAGTTGATGAAGCTGCGACTT..................................................................................................................................................................................................................................................2111.001000001
.................................................................................................GTT----TTT-CC-AGCTGATTGCATTGAATG....................................................................................................................................................................................................2611.001000010
........................................................................................................TTT-CC-AGCTGATTGCATTGAATGCGCGC...............................................................................................................................................................................................2811.001100000
..............................................................AAGTTGATGAAGCTGCGAC....................................................................................................................................................................................................................................................1911.001000100
.............................................................................................TTGAGTT----TTT-CC-AGCTGATT..............................................................................................................................................................................................................2011.001100000
.....................................GACAATTTGTTACCCTTGCTAGAG........................................................................................................................................................................................................................................................................2411.001100000
........TTGAAT----------TATCTCATGTGATGAC.............................................................................................................................................................................................................................................................................................2211.001100000
........................TATCTCATGTGATGACAATTTGTTACCCC................................................................................................................................................................................................................................................................................2911.001000010
...................................................................................................................GATTGCATTGAATGCGCGCTTTACATTA......................................................................................................................................................................................2811.001100000
.........................................................................................................TT-CC-AGCTGATTGCATTGAATG....................................................................................................................................................................................................2211.001100000
.................................................................TTGATGAAGCTGCGACTT..................................................................................................................................................................................................................................................1811.001100000
..................................GATGACAATTTGTTACCCTTGCTAGAGT.......................................................................................................................................................................................................................................................................2811.001100000
...................................................................................................T----TTT-CC-AGCTGATTGCATTGAATGCGCGC...............................................................................................................................................................................................2911.001100000
...........AAT----------TATCTCATGTGATGACAATTT........................................................................................................................................................................................................................................................................................2411.001100000
........................................................................AGCTGCGACTTATCCATGTGATTG.....................................................................................................................................................................................................................................2411.001100000
......................................................................................................................TGCATTGAATGCGCGCTTTACATTAC.....................................................................................................................................................................................2611.001100000
.........................................................................................................................ATTGAATGCGCGCTTTACATT.......................................................................................................................................................................................2111.001100000
.........TGAAT----------TATCTCATGTGATGAC.............................................................................................................................................................................................................................................................................................2111.001100000
.....................................................................TGAAGCTGCGACTTATCCAT............................................................................................................................................................................................................................................2011.001100000
................................................................GTTGATGAAGCTGCGACTTAT................................................................................................................................................................................................................................................2111.001000001
............AT----------TATCTCATGTGATGACA............................................................................................................................................................................................................................................................................................1911.001100000
.......................................................................................................................GCATTGAATGCGCGCTTTACATTA......................................................................................................................................................................................2411.001100000
...........................CTCATGTGATGACAATTTGT......................................................................................................................................................................................................................................................................................2011.001000001
..................................................CCTTGCTAGAGTAAGTTGATG..............................................................................................................................................................................................................................................................2111.001000001
............................................................................................................................................................................................................................................................................................................GGCTTAAAAAAGAGGTGGAGA....2111.001000001
..........................................................................................................................TTGAATGCGCGCTTTACAT........................................................................................................................................................................................1911.001100000
....................................................................................................................................................................................................................................................................................................GCTGCGTCGGCTTAAAAAAGAGGTGGA......2711.001000001
....................................TGACAATTTGTTACCCTTGC.............................................................................................................................................................................................................................................................................2011.001100000
........................................................................................................................CATTGAATGCGCGCTTTACATT.......................................................................................................................................................................................2211.001100000
.............................................................TAAGTTGATGAAGCTGCGACT...................................................................................................................................................................................................................................................2111.001100000
.......................................................CTAGAGTAAGTTGATGAAGC..........................................................................................................................................................................................................................................................2011.001000001
................................................................................................AGTT----TTT-CC-AGCTGATTGCATTG........................................................................................................................................................................................................2311.001100000
..........................................................GAGTAAGTTGATGAAGCTG........................................................................................................................................................................................................................................................1911.001000001
...........................................................................................GATTGAGTT----TTT-CC-AGCTG.................................................................................................................................................................................................................1911.001000001
.....................................GACAATTTGTTACCCTTGCTAGAGT.......................................................................................................................................................................................................................................................................2511.001100000
.......ATTGAAT----------TATCTCATGTGAT................................................................................................................................................................................................................................................................................................2011.001100000
.................................................................TTGATGAAGCTGCGACTTA.................................................................................................................................................................................................................................................1911.001100000
.....................................................TGCTAGAGTAAGTTGATGAAGCTG........................................................................................................................................................................................................................................................2411.001000001
.........................................ATTTGTTACCCTTGCTAGAGTA......................................................................................................................................................................................................................................................................2211.001100000
...............................................................AGTTGATGAAGCTGCGACTTATCCATGT..........................................................................................................................................................................................................................................2811.001100000
..........................................TTTGTTACCCTTGCTAGAGTA......................................................................................................................................................................................................................................................................2111.001100000
.................................................................................................................................................................................................................................................................................................................AAAAAAGAGGTGGAGAAG..1811.001000001
...................................................................................................T----TTT-CC-AGCTGATTGCATTGAATGCG..................................................................................................................................................................................................2611.001100000
.............................................GTTACCCTTGCTAGAGTAAG....................................................................................................................................................................................................................................................................2011.001100000
........................................................................AGCTGCGACTTATCCATGTGA........................................................................................................................................................................................................................................2111.001100000
...................................................................GATGAAGCTGCGACTTATCCATGT..........................................................................................................................................................................................................................................2411.001100000
................................................................GTTGATGAAGCTGCGACTTATCCA.............................................................................................................................................................................................................................................2411.001000100
...........AAT----------TATCTCATGTGATGACAATT.........................................................................................................................................................................................................................................................................................2311.001100000
.......................................................................................ATGTGATTGAGTT----TTT-CC-AGC...................................................................................................................................................................................................................2111.001100000
..................................GATGACAATTTGTTACCCTT...............................................................................................................................................................................................................................................................................2011.001100000
............................................................................................ATTGAGTT----TTT-CC-AGCTGATTG.............................................................................................................................................................................................................2211.001100000
......CATTGAAT----------TATCTCATGTGATGACAATT.........................................................................................................................................................................................................................................................................................2811.001100000
...........................................TTGTTACCCTTGCTAGAGTAAGTT..................................................................................................................................................................................................................................................................2411.001100000
...............................................................AGTTGATGAAGCTGCGACT...................................................................................................................................................................................................................................................1911.001100000
....................................................TTGCTAGAGTAAGTTGATGAAGC..........................................................................................................................................................................................................................................................2311.001000100
................................................ACCCTTGCTAGAGTAAGTTGATGAA............................................................................................................................................................................................................................................................2511.001100000
..................................................CCTTGCTAGAGTAAGTTGATGA.............................................................................................................................................................................................................................................................2211.001000001
........................................................................................TGTGATTGAGTT----TTT-CC-AGC...................................................................................................................................................................................................................2011.001100000
........................................................TAGAGTAAGTTGATGAAGCTGCGA.....................................................................................................................................................................................................................................................2411.001100000
.........................................................................GCTGCGACTTATCCATGTG.........................................................................................................................................................................................................................................1911.001100000
.........................................ATTTGTTACCCTTGCTAGAG........................................................................................................................................................................................................................................................................2011.001000001
..................................................................................................................TGATTGCATTGAATGCGCGC...............................................................................................................................................................................................2011.001100000
.........................................................................GCTGCGACTTATCCATGTGATTGAGT..................................................................................................................................................................................................................................2611.001100000
.............................................................................................TTGAGTT----TTT-CC-AGCTGATTGC............................................................................................................................................................................................................2211.001100000
....................................................................ATGAAGCTGCGACTTATCCATGT..........................................................................................................................................................................................................................................2311.001000001
...................................................................................................T----TTT-CC-AGCTGATTGCATTGAATGCGC.................................................................................................................................................................................................2711.001100000
............................................................................................ATTGAGTT----TTT-CC-AGCTGATTGC............................................................................................................................................................................................................2311.001100000
..................................................CCTTGCTAGAGTAAGTTGATGAA............................................................................................................................................................................................................................................................2311.001000001
................................................................................................AGTT----TTT-CC-AGCTGATTGCATT.........................................................................................................................................................................................................2211.001100000
.................................................................................................................................................................................................................................................................................AGGTTATTCGTCCATTTCTGCTGCGTC.........................2711.001000010
........................................................................................................TTT-CC-AGCTGATTGCATTG........................................................................................................................................................................................................1911.001100000
..................................................................................................TT----TTT-CC-AGCTGATTGCATT.........................................................................................................................................................................................................2011.001100000
.................................................................TTGATGAAGCTGCGACTTAT................................................................................................................................................................................................................................................2011.001100000
..........................................TTTGTTACCCTTGCTAGAGT.......................................................................................................................................................................................................................................................................2011.001100000
................................................................................................AGTT----TTT-CC-AGCTGATTGCAT..........................................................................................................................................................................................................2111.001100000
.................................................................................................GTT----TTT-CC-AGCTGATTGCA...........................................................................................................................................................................................................1911.001100000
...................................ATGACAATTTGTTACCCTTGC.............................................................................................................................................................................................................................................................................2111.001100000
.....................................................TGCTAGAGTAAGTTGATGAAGCT.........................................................................................................................................................................................................................................................2311.001100000
.......................................................................................ATGTGATTGAGTT----TTT-CC-AGCT..................................................................................................................................................................................................................2211.001000001
.........TGAAT----------TATCTCATGTGATGA..............................................................................................................................................................................................................................................................................................2011.001100000
........................................................................................TGTGATTGAGTT----TTT-CC-AGCTGA................................................................................................................................................................................................................2311.001000001
..................................GATGACAATTTGTTACCCTTGCTAGAGTA......................................................................................................................................................................................................................................................................2911.001100000
........................................................TAGAGTAAGTTGATGAAGCTGC.......................................................................................................................................................................................................................................................2211.001000001
...............................................................................................................AGCTGATTGCATTGAATGCG..................................................................................................................................................................................................2011.001100000
.............T----------TATCTCATGTGATGACAATTT........................................................................................................................................................................................................................................................................................2211.001100000
............................................................................................................................GAATGCGCGCTTTACATTACTT...................................................................................................................................................................................2211.001100000
.........................................................................................................TT-CC-AGCTGATTGCATTGAATGC...................................................................................................................................................................................................2311.001100000
............................................................GTAAGTTGATGAAGCTGCGACTTAT................................................................................................................................................................................................................................................2511.001100000
.........................ATCTCATGTGATGACAATTTGTTACCC.................................................................................................................................................................................................................................................................................2711.001100000
.......................................................CTAGAGTAAGTTGATGAAGCTGC.......................................................................................................................................................................................................................................................2311.001000001
..............................................................................................TGAGTT----TTT-CC-AGCTGATTGCAT..........................................................................................................................................................................................................2311.001000001
................................................................................................AGTT----TTT-CC-AGCTGATTGCATTGAATGC...................................................................................................................................................................................................2811.001100000
....................................................................................................................ATTGCATTGAATGCGCGCTTTACATTA......................................................................................................................................................................................2711.001100000
.................................................................TTGATGAAGCTGCGACTTATCCATGT..........................................................................................................................................................................................................................................2611.001100000
......................................................GCTAGAGTAAGTTGATGAAGCTGCG......................................................................................................................................................................................................................................................2511.001000001
.............................................................................................TTGAGTT----TTT-CC-AGCTGATTGCA...........................................................................................................................................................................................................2311.001100000
................................................................................CTTATCCATGTGATTGAGT..................................................................................................................................................................................................................................1911.001100000
droGri2
GTGTCACATTGATTTTCAATAAC-AACCACATGTGATGACAATTTGTTAA-CTTGCTAAACTAAATCT--AAAGCTGCGACTTATCCATGTGATCGTGTC----CTTTCA-AAATTATCACATTGAATACGCGCTTTACACTCCT-TATTTA-TATG-C-----------------ATTT-TGATG--TTGTTTTAAT------TT-G----AGC-AATCGTGTTAATCAA----------TT----A---TTGTTTTTAT------TTACATAGGTCATTCGTCCATTTTTGCTGCGACGCCTTAAAAAGGAGGTGGAGAAGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................................................GCTAAACTAAATCT--AAAGCTGCGA.....................................................................................................................................................................................................................................................2411.00110
......................................................................................................................CACATTGAATACGCGCTTTACACTC......................................................................................................................................................................................2511.00110
..........................................................AACTAAATCT--AAAGCTGCGACTTAT................................................................................................................................................................................................................................................2511.00101
......................................................................................................................CACATTGAATACGCGCTTTACACTCC.....................................................................................................................................................................................2611.00110
...................................................CTTGCTAAACTAAATCT--AAAGCTGCGACT...................................................................................................................................................................................................................................................2911.00101
......................................................................................CATGTGATCGTGTC----CTTTC........................................................................................................................................................................................................................1911.00110
..................................................................................................................................................................................................................................................................................................................AAAAGGAGGTGGAGAAGC.1811.00101
.....................AC-AACCACATGTGATGACAATT.........................................................................................................................................................................................................................................................................................2211.00110

Generated: 05/18/2015 at 01:33 PM