ID:

dsi_22010

 Coordinate:

2r:8495792-8495964 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.6 -6.6 -6.6 -5.9

Flybase annnotation

exon [2r_8495965_8496297_-]; CDS [2r_8495965_8496157_-]; exon [2r_8495545_8495791_-]; CDS [2r_8495545_8495791_-]; intron [2r_8495792_8495964_-]

No Repeatable elements found

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GTCCAAAGCAGCGGCACCGTTCCCCAAATCTCTATCCCAGGCCCCGGCAGGTTGGCTGTGCATGCCTATTTTAGATTTTGAACACCCAACCCAGTAGTTTCAGTTCCGGATACGTAGCTCACCCAAAATTCGTAGTATTCAGAAAAAAAAACCAAAAAATAGCAGATAACCATGTCGACAAACGAACCGAGCATTACTAACAAGCTGCGTTCCCTCTTGCTAGATGACCAGGTGGCCAGGGATCGGCTGATGCTCAAGCCGGCATTGGCCGTC
*****************************************************************************************************.((((......((.............................................................))......))))************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M024
male body		 M023
head
 M025
embryo
 O001
Testis
 SRR902008
ovaries
 SRR902009
testis
 M053
female body
...........................................................................................................................................................................................................................................CCAGGGATCGGCGGATGTT................... 19 2 2 9.00 18 2 7 4 1 0 3 1 0 0 0 0 0
...........................................................................................................................................................................................................................................CCAGGGATCGGCGGATG..................... 17 1 4 3.50 14 8 2 1 3 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................ACCAGGGATCGGCGGATGTT................... 20 3 5 2.40 12 2 4 3 0 0 1 1 0 0 1 0 0
.........................................................................................................................................................................................................................................GACCAGGGATCGGCGGATGTT................... 21 3 2 1.50 3 2 0 0 0 0 0 0 0 0 1 0 0
...........................................................................................................................................................................................................................................CCAGGGATCGGCGGAT...................... 16 1 6 1.50 9 5 2 2 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................GACCAGGGATCGGCGGATG..................... 19 2 4 1.50 6 5 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................ACCAGGGATCGGCGGATG..................... 18 2 6 1.33 8 3 1 0 3 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................................ACCAGGGATCGGCGGAT...................... 17 2 17 1.24 21 6 13 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................CAGGGATCGGCGGATG..................... 16 1 9 1.11 10 8 2 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................AGGGATCGGCGGATG..................... 15 1 15 1.07 16 11 3 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................GATCGGCTGATGCTCAAG............... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................AGTTCCGGATACGTAGCTCACC...................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................................................................CCAGGGATCGGCTGATGTT................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................CCATGTCGACAAACGAAC...................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................................................................................AGATGACCAGGTGGCCAGGG................................ 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................GCGACCAGGGATCGGCTGATGTT................... 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................CTCTTGCTAGATGACCAG.......................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
...........................................................................................................................................................................................................................................CCAGGGATCGGCGGATGT.................... 18 2 8 0.88 7 2 2 0 1 0 2 0 0 0 0 0 0
...........................................................................................................................................................................................................................................CCAGGGATCGGCGGATGTTA.................. 20 3 5 0.80 4 0 0 4 0 0 0 0 0 0 0 0 0
..............................................GCCGGTTGGCTGTGCAT.................................................................................................................................................................................................................. 17 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................AAACTGCGTTCTCACTTGCTA................................................... 21 3 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................CAGGGATCGGCGGAT...................... 15 1 15 0.47 7 4 3 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................CCAGGGATCGGCGGATGTTG.................. 20 3 13 0.46 6 2 0 0 3 0 0 0 0 0 0 1 0
.........................................................................................................................................................................................................................................GACCAGGGATCGGCGGAT...................... 18 2 9 0.44 4 2 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................................GACCAGGGATCGGCGGATGT.................... 20 3 8 0.38 3 1 0 0 0 0 1 1 0 0 0 0 0
.................................................................................................................................TCGTAATCGTCAGAAAAAAAAA.......................................................................................................................... 22 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1 0
..........................................................................................................................................................................................................................................ACCAGGGATCGGCGGATGT.................... 19 3 17 0.24 4 1 0 0 0 0 1 2 0 0 0 0 0
............................................................................................................................................................................................................................................CAGGGATCGGCGGATGT.................... 17 2 19 0.21 4 2 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................CTAGGGATCGGGTGGTGCT................... 19 3 20 0.20 4 0 0 0 0 0 0 0 0 0 0 0 4
....................................................................................................CAGCTCCGGGGACGTAGCT.......................................................................................................................................................... 19 3 10 0.20 2 0 0 0 0 2 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................CCAGGGATCGGGTGGTGTT................... 19 3 20 0.20 4 0 0 0 0 2 0 0 0 0 0 0 2
............................................................................................................................................................................................................................................CAGGGATCGGCGGATGTT................... 18 2 10 0.20 2 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................ATTAGCAGATAACCATCTC................................................................................................. 19 2 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................TTCGTAGTATTCGGAAGA............................................................................................................................... 18 2 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................TCCAGGGATCGGCGGATG..................... 18 2 9 0.11 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TAGATGACGAGGTGG...................................... 15 1 10 0.10 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................GGCAGGGTGGCTGAGCGTG................................................................................................................................................................................................................. 19 3 18 0.06 1 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................TGTTCCGGGGACGTAGCT.......................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................CAGGGATCGGCGGATGTTA.................. 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................ATTACTAACGAACAGCGT............................................................... 18 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................................CCAGGGATTGGCGGATGTT................... 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CAGGTTTCGTCGCCGTGGCAAGGGGTTTAGAGATAGGGTCCGGGGCCGTCCAACCGACACGTACGGATAAAATCTAAAACTTGTGGGTTGGGTCATCAAAGTCAAGGCCTATGCATCGAGTGGGTTTTAAGCATCATAAGTCTTTTTTTTTGGTTTTTTATCGTCTATTGGTACAGCTGTTTGCTTGGCTCGTAATGATTGTTCGACGCAAGGGAGAACGATCTACTGGTCCACCGGTCCCTAGCCGACTACGAGTTCGGCCGTAACCGGCAG
**************************************************************************************.((((......((.............................................................))......))))***************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M024
male body
.......................................................................................................................................................................................................TGTTCGACGCAAGGGAGAA....................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0
.....................................................................................................................................TCATAAGTCTTTTTTTTTGGT....................................................................................................................... 21 0 1 2.00 2 0 2 0 0 0 0 0
..GGTTTCGTCGCCGAGGCAG............................................................................................................................................................................................................................................................ 19 2 1 1.00 1 1 0 0 0 0 0 0
..................................................................................................................................................................................GTTTGCTTGGCTCGTAATGAT.......................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0
...................................................................................TGGGTTGGGTCATCAAAGTCA......................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0
...................................................................................................................................................TTTTGGTTGTCTATAGTCTATT........................................................................................................ 22 3 4 0.50 2 2 0 0 0 0 0 0
..............................................................................................ATCTAAGTCAAGGCCTGTG................................................................................................................................................................ 19 2 3 0.33 1 0 0 0 1 0 0 0
.....TTCGTCGCCGAGGCAGAGGGT....................................................................................................................................................................................................................................................... 21 3 4 0.25 1 1 0 0 0 0 0 0
......................................................................................................................................CTTAAGTCTTCTTTTTTGGTCT..................................................................................................................... 22 3 5 0.20 1 0 0 0 0 1 0 0
...............................GATAGGGTACGGGCCCG................................................................................................................................................................................................................................. 17 2 6 0.17 1 0 0 0 0 0 1 0
...............................................................................................................................................................................................GTAAGGATTGTTCAACGCAG.............................................................. 20 3 9 0.11 1 0 0 0 0 0 0 1
...........................................................................AAAACTTGTGCGTTGG...................................................................................................................................................................................... 16 1 13 0.08 1 0 1 0 0 0 0 0
.....................GGGGTTCAGAAATAGGG........................................................................................................................................................................................................................................... 17 2 16 0.06 1 0 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:8495742-8496014 - dsi_22010 GTCCAAAGCAGCGGC---A----CCGTTCC---CCAAATCTCTATCCCAGGCCC----CGGCAGGTTGGCTGTGCATGCCTATTTTAGATTTTGAACACCCA--ACCCAGTAGTTTCAGTTC--CGGATACGTAGCTCACC-CAAAATTCGTAGTATTC------------AGAAAAAAAAA--CCAAAAAA-----------TA-------G--C------AGATAACCATGTCGACAAACGAACC----GAG-----------CATTACTAACAAGCTGCG------------TTCCCTCTTGCTAGATGACCAGGTGGCCAGGGATCGGCTGATGCTCAAG----C------------------------C--GGC----ATTGGCCGTC
droSec2 scaffold_1:5342606-5342879 - GTCCAGAGCAGCGGC---T----CCGTCTC---CCAAAACTCTATCCCAGGCCC----CGGCAGGTTGGCTGTGCATGCCTATTTTAGATTTCGTACACCCA--ACCCAGTAGTTTCAGTTC--CGGATACGTAGCTCACC-CAAAATTCGTAGTATTC------------AGAAAAAAA-AAACCAAAAAA-----------TA-------G--C------AGATTACCATGTCGCCAAACGAACC----GAG-----------CATTACTAACAAGCTGCG------------TTCCCTCTTGCTAGATGACCAGGTGGCCAGGGATCGGCTGATGCTCAAG----C------------------------C--GGC----ATTGGCCGTC
dm3 chr2R:7790867-7791135 - GTCCAAAGCAGCGGC---A----CCGTCTC---CCAAATCTCTATCCCAGGCCC----CGGCAGGTTGGCTGTGCATGCCTATTTTACATTTTGAACACCCA--ACCCAGTAGTTTTAGTTC--CGGATACGTAGCTCACC-CAAAATTCGTAGTATTC------------AAAAAA-AA-----AAAAAAA-----------AA-------A--C------AGATTACCATGTCGACAAACGAACC----GAG-----------CATTACTAACAAGTTGCG------------TTCCCTCCTGCTAGATGACCAGGCGGCCAGGGATCGGCTGATGCTCAAG----C------------------------C--GGC----ATTAGCCGTC
droEre2 scaffold_4845:18004400-18004671 + GTCCAAACCAACGGC---A----CTGGCTC---CCAAATCTCTATCCCAGGCCC----CGGCAGGTTGGCTGTGCATGCCTATTTTAGAATTTGAACACCCA--CCCCAGTAGTTTTAATTC--CGGATACGTAGCTCACC-CAAAATTCGTAGTTGTA------------AAAGAT-ATTAA--AAAAAAA-----------TA-------A--C------AGATTACCATGTGGACAAACGACCC----GAG-----------CATAACTAACAAGCTGCG------------TTCCCTCCTGCTAGATGACCAGGTGGCCAGGGATCGGCTGATGCTCAAC----C------------------------C--GGC----ATTGGCGGTC
droYak3 2R:9162338-9162608 + GTCCAAACCAGCGGC---A----CCGGCTC---CCAAATCTCTATCCCAGGCCC----CGACAGGTTGGCTGTGCATGCCCATTTTAGAATTCGAACACCCA--CCCCAGTAGTTTTAATTC--CGGATACGTAGCTTACC-CAAAATTCGTAGTTGTA------------AAAAAA-TATAC--A-AAAAA-----------AA-------T--C------AGATTACCATGTGGACAAACGACCC----GAT-----------CATTACTAACAAGCTGCG------------TTCCCTCCTGCTAGATGACCAGGTGGCCAGGGATCGGCTGATGCACAAG----C------------------------C--GGC----ATTGGCCGTC
droEug1 scf7180000409462:691028-691296 + GTCTAAGCCAACTACTACC----CTGCCTT---CGAAATCTCAATCTCAGGCTC----TGGCAGGTTGGCTGTGCATTCCGTTTTTAGAGATCTAACA------CCCCAGTAGTTTTAGTTC--CGGATGCTTAGCTAACC-CAAAATTTTTAGTTGTA------------GAAAGT-AGTAA--A--AAAA-----------TA-------T--C------AGATCACCATGTGGAGGAATGACCC----CAA-----------CATTGCTAACAAGATGCG------------TTCTCTGTTGCTAGATGACCAGAAGGCCAGGGATCAGCTGATGCTCAAG----C------------------------A--AAA----CCTAGCCGCC
droBia1 scf7180000302292:577991-578257 - GTCCAAGCCGACGAC---C----CTGCCTT---CCAAATCTCAGTCCCAGGCCC----CGGCAGGTTGGCTGTGCATTCCATTTTTAGAGTTCTAACA------ACCCAGTAGTTTTAATTC--CGGATGCGTAGCTAACCCCTAAATTTGTAGTTGTA------------GAAAAC-AGTAC--A--GAAA-----------TA-------T--C------AGATCACCATGTGGAGAAATGACCC----GAA-----------CATCGCTAACAAGCTGCG------------TTCTCTATTGATAGATGACCAGGTGGCCAAGGATCGGCTGATGCTTAAG----C------------------------C--GGC----CCTAGCCGTC
droTak1 scf7180000415820:168959-169225 - GCCCAAGCCGGCGAC---C----CTGCCTC---CCAAACCCCAATCTCAGGCCC----CGGCAGGTTGGCTGTGCATTGCTTTTTTCGAGATCTAACA------ACCCAGTAGTTTTAAATC--CGGATGCGTAGCTAACCCCAAAATTCGTAGTCGTA------------GAAAAC-AGTAC--A--GAAA-----------TA-------T--C------AGATCAACATGTGGACAAATGACCC----GAG-----------CATCGCTAACAGGCTGCG------------TTCTCTCTTGCTAGATGACCAGGTGGCCAGGGATCGGCTGATGCTCAAG----C------------------------C--GGC----CCTAGCCGTC
droEle1 scf7180000491214:3294101-3294382 - GCTCAAACCGTCGCC---C----CTGGCAC---CCAAATCTCAAACCCAGGTCC----CAGCAGGTTGGCTGTGCTTACCCTTTTACGAGACCTATCCCACC--ACCCAGTAGTTTTAACTC--CGGATGCGTAGCTAACC-CTAAATTTGTAGTCGTA------------GAAATC-AGTAC--A--GAAA-----------CTTTAGATATAACAAA---ACATAACCATGTGGAGAGTTGACCC----AAC-----------TATTGCTAACCAGCTCCG------------TTCTCTCTTGCTAGATGACCAGCTGGCCAAGGATCGGCGGATGCTCAAC----C------------------------C--CGC----TCTGGCCGTC
droRho1 scf7180000779932:195865-196145 - GTCCAAACCGTCGCC---C----CTGACAC---CCAAATCTCAATCTCAGGTCC----CAGCAGGTTGGCTGTGCTTACCCTTTTAAAAGATCTAAC---CA--ACCCAGTAGTTTTAATTC--CGGATGCGTAGCTAACC-CTAAATTTGTAGTTGTA------------GAAATC-AGTAC--A--GAAACATAT-------TTTAGATAT--TCAA---ACATCACCATGTGGAGGAATGACCC----AAA-----------TATCGCTAACAAGCTACG------------TTCTCTCTTGCTAGATGACCAGGTGGCCAAGGATCGGCTGATGCTCAAG----C------------------------C--CGT----CCAAGCCGTC
droFic1 scf7180000453948:918914-919157 - GCCGAAGCCGAACAC---C----CAGCCAA---T------TAAATCTCAAGCTT----TGGCAGGTTGGCTGTGATTTCCAGTTTTACAGATCTAACAC-----ACCCAGTAGTTTTA-TTC--CGGATAAGTAGCTAACC-CAAAATTTACAGTAGTC------------AAAAAC-AGTAC--AAAAATA-----------TA-------A--G------ATATCACCATGTGGAAAAGCGATCC----GAA-----------CTTTGCTAACAAGCTGCG------------TTTACTTTTGCTAGACGACCAGCTGACTACGGAACGGCT----------------------------------------------------GGCCGCT
droKik1 scf7180000302682:1477814-1478100 + GGCCGGGCCTGTCGCCCCATTG---GCCTCCCACCAAATCTCAATCTCAAACTT----CAGCAGGTTGGCTTCGCTTTACTTTTTAACAGTTGA----CTTGAACCTC--AATTTTTAGTTT--CGGATGCTTAGTTAACC-CAAAATTTTTAGTCATA------------TAAAAA-TATAT--A--AAAAAAAAAAGAAAATA-------T--C------CAACCGCAATGTGGGGAAGTGATGT----AGA-----------CAAAGTTCATGAGTTTTA------------TTCTCTTTGGATAGCCGACCTGCTGGCCAGGGC-CGGCGA----------------------G---AAGGACTCTGGAC--TCC---ATACGGCCGCC
droAna3 scaffold_13266:8632443-8632716 - TT-----------------------GCCTC---CAAAGTCTCTCTCCCAGGGCA----CGGCAGGTTGGCTTTGCAATTGTTTTATGGATATCTAACA------AATCAGTAATTTTAATTT--CGGATGCGTAGCTAA---CAAAATTTGTAGTATCA------------GAGTTA-TAAAA--AATAAAA-----------GA-------T--C------AGATCACCATGTGGAGAAGTGACCC----AAG-----------CATCGCTAATAAATTACG------------TTCTTCCTGGATAGATAACCTGCTGAGCAAGGAGCGCCAGAAGCTGCAG----CAGCCGCCCG---AAGAGAACCGGACCAT---CCAGTTGGCCGTT
droBip1 scf7180000396759:194248-194542 + ATTCAAACTTTTTGCCGCACAAGTTGCCTC---CAAAGTCTCTCTCCCAGGGGA----CAGCAGGTTGGCTTTGCATTACTTTTATGGATATCTAACA------ATTCAGTACTTTTAATTT--CGGATGCGTAGCTAA---CAAAATTTGTAGTATCA------------GAGTTA-TA-ACAATAAAATA-----------GA-------T--C------ACATCGCCATGTGGAAAAGTGACCC----AAA-----------CATCGCTAATAAAATACG------------TTCTTCCTGGATAGATACCCTGCTAAGCAAGGAACGCCAGAAGCTGCAG----CAGCCG---G---ACGGCATCCAGACCAT---CCAGTTGGCCGTG
dp5 3:17035007-17035256 - CC--GAAGCATCTGA------------------------ATCAGCCTCAGAACA----CAGCAGGTAGGCTTTGTATTTTTGTTGTAATATT------------------TAGTAATATTTT--TGGATACGGAGCTAT---CAAAATTAGTAGTAACT------------AAAATA-TATA--------------------------------------------CGCAATGTGGCAAATAGATCA----AGA-----------AATCGCTAACCAAATTTG------------TTCTTCTTGGATAGATACCATGCGTGCCTCGGAGAAGATGCCGGACGTGCACAC--TAGTGCAAAAAAAACGTCCAAACC-TTCTCCCG-TGGCC--C
droPer2 scaffold_31:724198-724412 + CC--GAAGCAACTGA------------------------ATCAGCCTCAGAACA----CAGCAGGTAGGCTTTGTATTTTTGTTGTAATATT---------------TAGTAATC---TTTT--TGGATACGGAGCTAT---CAAAATTAGTAGTAACT------------AAAATA-TATA--------------------------------------------GACAATGTGGCAATTAGATCC----AGA-----------AATCGCTAACCAAATTTG------------TTCTTCTTGGATAGATACCATGCGTGCCTCGGAGAAGATGCCGGACGTGCACAC------------------------------------TAG-----
droWil2 scf2_1100000004558:2700922-2701219 + GCGAG----------------------CAC---CCAGATTTGAATTTAAAGAAACTAGTTTCAGGTTGGCTTTGCCCTATTACTTACCCTATTGACTT-TCA--ACTTA--ATTTTTAATTTATCTGATG---------AT-CTAAATTAGTAGTATTAACTTATCAGCTTAAAAAAAAC-AAACCAAAAAA-----------TA-------T--AGTGACCTGAGGGCAATGTGGACAGCAGAAATCCCCAATCGTCTGTTTACCTATACGAAAATGTTGAATTTTTTATGCAATTTTTTTATTTTAGACAATCCAAAGAGAAATGAGAAGTTCTTGGACGCA----C------------------------A--ATC----GTCAAGCGAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GTCCAAAGCAGCGGC---A----CCGTTCC---CCAAATCTCTATCCCAGGCCC----CGGCAGGTTGGCTGTGCATGCCTATTTTAGATTTTGAACACCCA--ACCCAGTAGTTTCAGTTC--CGGATACGTAGCTCACC-CAAAATTCGTAGTATTC------------AGAAAAAAAAA--CCAAAAAA-----------TA-------G--C------AGATAACCATGTCGACAAACGAACC----GAG-----------CATTACTAACAAGCTGCG------------TTCCCTCTTGCTAGATGACCAGGTGGCCAGGGATCGGCTGATGCTCAAG----C------------------------C--GGC----ATTGGCCGTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................................................................................................................GATCGGCTGATGCTCAAG----.............................................1811.00100000010000000000
.....................................................................................................................AGTTC--CGGATACGTAGCTCACC-...........................................................................................................................................................................................................................................................2211.00110000000000000000
....................................................................................................................................................................................................................................CCATGTCGACAAACGAAC...................................................................................................................................................1811.00100100000000000000
...................................................................................................................................................................................................................................................................................................................AGATGACCAGGTGGCCAGGG..................................................................2011.00100000000001000000
...........................................................................................................................................................................................................................................................................................................CTCTTGCTAGATGACCAG............................................................................1811.00100001000000000000
droSec2
GTCCAGAGCAGCGGC---T----CCGTCTC---CCAAAACTCTATCCCAGGCCC----CGGCAGGTTGGCTGTGCATGCCTATTTTAGATTTCGTACACCCA--ACCCAGTAGTTTCAGTTC--CGGATACGTAGCTCACC-CAAAATTCGTAGTATTC------------AGAAAAAAA-AAACCAAAAAA-----------TA-------G--C------AGATTACCATGTCGCCAAACGAACC----GAG-----------CATTACTAACAAGCTGCG------------TTCCCTCTTGCTAGATGACCAGGTGGCCAGGGATCGGCTGATGCTCAAG----C------------------------C--GGC----ATTGGCCGTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................................................................................................ATGCTCAAG----C------------------------C--GGC----ATTGGCCG..2211.0011000
........................................................................................................................................................................................................................................................................................................................ACCAGGTGGCCAGGGATC...............................................................1811.0010010
.....................................AACTCTATCCCAGGCCC----CGG............................................................................................................................................................................................................................................................................................................................................2011.0010001
..................................................................................................................................................ATTCGTAGTATTC------------AGAAAA........................................................................................................................................................................................................................1911.0010001
dm3
GTCCAAAGCAGCGGC---A----CCGTCTC---CCAAATCTCTATCCCAGGCCC----CGGCAGGTTGGCTGTGCATGCCTATTTTACATTTTGAACACCCA--ACCCAGTAGTTTTAGTTC--CGGATACGTAGCTCACC-CAAAATTCGTAGTATTC------------AAAAAA-AA-----AAAAAAA-----------AA-------A--C------AGATTACCATGTCGACAAACGAACC----GAG-----------CATTACTAACAAGTTGCG------------TTCCCTCCTGCTAGATGACCAGGCGGCCAGGGATCGGCTGATGCTCAAG----C------------------------C--GGC----ATTAGCCGTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................................................................................................................................................................................................................................................AGATGACCAGGCGGCCAGGGA.................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................GCGGCCAGGGATCGGCTGATGCTC....................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................ATGCTCAAG----C------------------------C--GGC----ATTAGCCGT.2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................AGATGACCAGGCGGCCAGG...................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000
.................................................................................................................................................................................................................................................................................ACAAGTTGCG------------TTCCCTCCTGCTAG....................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000
............................................................................................................AGTAGTTTTAGTTC--CGGATAC......................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................................ACAAGTTGCG------------TTCCCTCCTGC.......................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000
........................................................................................................................................................................................................................................................................................................................ACCAGGCGGCCAGGGATCGG.............................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000
.................................................................................................................................................................................................................................................................................ACAAGTTGCG------------TTCCCTCCTGCTA.....................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
................................................................................................................................................................................................................................................................................................................................GCCAGGGATCGGCTGATGCTCAAG----C------------------------C--.................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................ACC----GAG-----------CATTACTAACAAGTTG................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000
................................................................................................................................................................................................................................................................................................................GCTAGATGACCAGGCGGC.......................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................GGCGGCCAGGGATCGGCTGATGCT.....................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................CCCAGTAGTTTTAGTTC--CGGAA........................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................AGTTGCG------------TTCCCTCCTGCTAGA...................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................CAGGCGGCCAGGGATCGGCTGC.........................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................................................................................................................................................................................................................................................................................................................................CAGGGATCGGCTGATGCTCAAG----C------------------------....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................CAGGGATCGGCTGATGCTCAAG----C------------------------C--GG...............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................TCGACAAACGAACC----GAG-----------CATT............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................CTGATGCTCAAG----C------------------------C--GGC----ATTAGCCGTC2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................................................................................................................................ACCATGTCGACAAACGAACC----GAG-----------................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................TTACTAACAAGTTGCG------------TTCCC.............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................AGATGACCAGGCGGCCAGGGATCGGCT...........................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................GACCAGGCGGCCAGGGATCGG.............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................AACAAGTTGCG------------TTCCCTCCTG........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................AACAAGTTGCG------------TTCCCTCCTGCTA.....................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.................................................................................................................................................................................................................................................................................................................................CCAGGGATCGGCTGATG.......................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AAAGCAGCGGC---A----CCGTCTC---CC......................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................GTTGCG------------TTCCCTCCTGCTAGATG.................................................................................2311.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................TGCTAGATGACCAGGCGGCCAGGG..................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................AACAAGTTGCG------------TTCCCTCCTGCTAG....................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...................................................................................................................................................................................................................................................................................................................................AGGGATCGGCTGATGCTC....................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................AACC----GAG-----------CATTACTAACAAGTTGCG------------TT................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................AGGCGGCCAGGGATCGGCTGATGCTC....................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................ACTAACAAGTTGCG------------TTCCCTC...........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................GATGACCAGGCGGCCAGGGATCGG.............................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AAAGCAGCGGC---A----CCGTCTC---CCAA....................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................GCTCAAG----C------------------------C--GGC----ATTAGCCGT.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................CAGGCGGCCAGGGATCGGCTGA.........................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................CCAGGGATCGGCTGATGCTCAAG----C------------------------C--.................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TCCAAAGCAGCGGC---A----CCGTCT............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................CAGGGATCGGCTGATGCT.....................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................C----GAG-----------CATTACTAACAAGTTG................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.........................................................................................................................................CACC-CAAAATTCGTAGTATTC------------A.............................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TAGATGACCAGGCGGCCAGGGAT................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................CCC----CGGCAGGTTGGCTGTGCG.............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................GTTGCG------------TTCCCTCCTGCTAGA...................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...................................................................................................................................................................................................................................................AACC----GAG-----------CATTACTAACAAG...................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
........................................................................................................................................................................................................................................................................................................................ACCAGGCGGCCAGGGATCGGC............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...................................................................................................................................................................................................................................ACCATGTCGACAAACGAA....................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................AA-------A--C------AGATTACCATGTCGACAAAC.......................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.....................................................................................TACATTTTGAACACCCA--ACCCAGTAGTT......................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................ACAAGTTGCG------------TTCCCTCCTG........................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................TGCTAGATGACCAGGCGGCCA.....................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................ACAAGTTGCG------------TTCCCTCCTGCT......................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....AAGCAGCGGC---A----CCGTCTC---C.......................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...................................................................................................................................................................................................................................ACCATGTCGACAAACGAACC----GAG-----------CAT.............................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................GTTGCG------------TTCCCTCCTGCT......................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................CCAGGCGGCCAGGGATCGGCT...........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.....................................................................................................................................................................................................................................................................................................................ATGACCAGGCGGCCAGGGATCGGCT...........................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................GGCTGTGCATGCCTATTTTACATTTTG...........................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................AGGCGGCCAGGGATCGGCT...........................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................ATGTCGACAAACGAACC----GAG-----------CA..............................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................GACCAGGCGGCCAGGGATCGGCT...........................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GTCCAAACCAACGGC---A----CTGGCTC---CCAAATCTCTATCCCAGGCCC----CGGCAGGTTGGCTGTGCATGCCTATTTTAGAATTTGAACACCCA--CCCCAGTAGTTTTAATTC--CGGATACGTAGCTCACC-CAAAATTCGTAGTTGTA------------AAAGAT-ATTAA--AAAAAAA-----------TA-------A--C------AGATTACCATGTGGACAAACGACCC----GAG-----------CATAACTAACAAGCTGCG------------TTCCCTCCTGCTAGATGACCAGGTGGCCAGGGATCGGCTGATGCTCAAC----C------------------------C--GGC----ATTGGCGGTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................TTTAGAATTTGAACACCCA--CC...............................................................................................................................................................................................................................................................................................2111.0011000000
droYak3
GTCCAAACCAGCGGC---A----CCGGCTC---CCAAATCTCTATCCCAGGCCC----CGACAGGTTGGCTGTGCATGCCCATTTTAGAATTCGAACACCCA--CCCCAGTAGTTTTAATTC--CGGATACGTAGCTTACC-CAAAATTCGTAGTTGTA------------AAAAAA-TATAC--A-AAAAA-----------AA-------T--C------AGATTACCATGTGGACAAACGACCC----GAT-----------CATTACTAACAAGCTGCG------------TTCCCTCCTGCTAGATGACCAGGTGGCCAGGGATCGGCTGATGCACAAG----C------------------------C--GGC----ATTGGCCGTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
GTCTAAGCCAACTACTACC----CTGCCTT---CGAAATCTCAATCTCAGGCTC----TGGCAGGTTGGCTGTGCATTCCGTTTTTAGAGATCTAACA------CCCCAGTAGTTTTAGTTC--CGGATGCTTAGCTAACC-CAAAATTTTTAGTTGTA------------GAAAGT-AGTAA--A--AAAA-----------TA-------T--C------AGATCACCATGTGGAGGAATGACCC----CAA-----------CATTGCTAACAAGATGCG------------TTCTCTGTTGCTAGATGACCAGAAGGCCAGGGATCAGCTGATGCTCAAG----C------------------------A--AAA----CCTAGCCGCCSizeHit CountTotal NormTotal
No Reads
droBia1
GTCCAAGCCGACGAC---C----CTGCCTT---CCAAATCTCAGTCCCAGGCCC----CGGCAGGTTGGCTGTGCATTCCATTTTTAGAGTTCTAACA------ACCCAGTAGTTTTAATTC--CGGATGCGTAGCTAACCCCTAAATTTGTAGTTGTA------------GAAAAC-AGTAC--A--GAAA-----------TA-------T--C------AGATCACCATGTGGAGAAATGACCC----GAA-----------CATCGCTAACAAGCTGCG------------TTCTCTATTGATAGATGACCAGGTGGCCAAGGATCGGCTGATGCTTAAG----C------------------------C--GGC----CCTAGCCGTCSizeHit CountTotal NormTotal
No Reads
droTak1
GCCCAAGCCGGCGAC---C----CTGCCTC---CCAAACCCCAATCTCAGGCCC----CGGCAGGTTGGCTGTGCATTGCTTTTTTCGAGATCTAACA------ACCCAGTAGTTTTAAATC--CGGATGCGTAGCTAACCCCAAAATTCGTAGTCGTA------------GAAAAC-AGTAC--A--GAAA-----------TA-------T--C------AGATCAACATGTGGACAAATGACCC----GAG-----------CATCGCTAACAGGCTGCG------------TTCTCTCTTGCTAGATGACCAGGTGGCCAGGGATCGGCTGATGCTCAAG----C------------------------C--GGC----CCTAGCCGTCSizeHit CountTotal NormTotal
No Reads
droEle1
GCTCAAACCGTCGCC---C----CTGGCAC---CCAAATCTCAAACCCAGGTCC----CAGCAGGTTGGCTGTGCTTACCCTTTTACGAGACCTATCCCACC--ACCCAGTAGTTTTAACTC--CGGATGCGTAGCTAACC-CTAAATTTGTAGTCGTA------------GAAATC-AGTAC--A--GAAA-----------CTTTAGATATAACAAA---ACATAACCATGTGGAGAGTTGACCC----AAC-----------TATTGCTAACCAGCTCCG------------TTCTCTCTTGCTAGATGACCAGCTGGCCAAGGATCGGCGGATGCTCAAC----C------------------------C--CGC----TCTGGCCGTCSizeHit CountTotal NormTotal
No Reads
droRho1
GTCCAAACCGTCGCC---C----CTGACAC---CCAAATCTCAATCTCAGGTCC----CAGCAGGTTGGCTGTGCTTACCCTTTTAAAAGATCTAAC---CA--ACCCAGTAGTTTTAATTC--CGGATGCGTAGCTAACC-CTAAATTTGTAGTTGTA------------GAAATC-AGTAC--A--GAAACATAT-------TTTAGATAT--TCAA---ACATCACCATGTGGAGGAATGACCC----AAA-----------TATCGCTAACAAGCTACG------------TTCTCTCTTGCTAGATGACCAGGTGGCCAAGGATCGGCTGATGCTCAAG----C------------------------C--CGT----CCAAGCCGTCSizeHit CountTotal NormTotal
No Reads
droFic1
GCCGAAGCCGAACAC---C----CAGCCAA---T------TAAATCTCAAGCTT----TGGCAGGTTGGCTGTGATTTCCAGTTTTACAGATCTAACAC-----ACCCAGTAGTTTTA-TTC--CGGATAAGTAGCTAACC-CAAAATTTACAGTAGTC------------AAAAAC-AGTAC--AAAAATA-----------TA-------A--G------ATATCACCATGTGGAAAAGCGATCC----GAA-----------CTTTGCTAACAAGCTGCG------------TTTACTTTTGCTAGACGACCAGCTGACTACGGAACGGCT----------------------------------------------------GGCCGCTSizeHit CountTotal NormTotal
No Reads
droKik1
GGCCGGGCCTGTCGCCCCATTG---GCCTCCCACCAAATCTCAATCTCAAACTT----CAGCAGGTTGGCTTCGCTTTACTTTTTAACAGTTGA----CTTGAACCTC--AATTTTTAGTTT--CGGATGCTTAGTTAACC-CAAAATTTTTAGTCATA------------TAAAAA-TATAT--A--AAAAAAAAAAGAAAATA-------T--C------CAACCGCAATGTGGGGAAGTGATGT----AGA-----------CAAAGTTCATGAGTTTTA------------TTCTCTTTGGATAGCCGACCTGCTGGCCAGGGC-CGGCGA----------------------G---AAGGACTCTGGAC--TCC---ATACGGCCGCCSizeHit CountTotal NormTotal
No Reads
droAna3
TT-----------------------GCCTC---CAAAGTCTCTCTCCCAGGGCA----CGGCAGGTTGGCTTTGCAATTGTTTTATGGATATCTAACA------AATCAGTAATTTTAATTT--CGGATGCGTAGCTAA---CAAAATTTGTAGTATCA------------GAGTTA-TAAAA--AATAAAA-----------GA-------T--C------AGATCACCATGTGGAGAAGTGACCC----AAG-----------CATCGCTAATAAATTACG------------TTCTTCCTGGATAGATAACCTGCTGAGCAAGGAGCGCCAGAAGCTGCAG----CAGCCGCCCG---AAGAGAACCGGACCAT---CCAGTTGGCCGTTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................................................................................................................................................................................................................AAGGAGCGCCAGAAGCTG....................................................1811.001100000
droBip1
ATTCAAACTTTTTGCCGCACAAGTTGCCTC---CAAAGTCTCTCTCCCAGGGGA----CAGCAGGTTGGCTTTGCATTACTTTTATGGATATCTAACA------ATTCAGTACTTTTAATTT--CGGATGCGTAGCTAA---CAAAATTTGTAGTATCA------------GAGTTA-TA-ACAATAAAATA-----------GA-------T--C------ACATCGCCATGTGGAAAAGTGACCC----AAA-----------CATCGCTAATAAAATACG------------TTCTTCCTGGATAGATACCCTGCTAAGCAAGGAACGCCAGAAGCTGCAG----CAGCCG---G---ACGGCATCCAGACCAT---CCAGTTGGCCGTGSizeHit CountTotal NormTotal
No Reads
dp5
CC--GAAGCATCTGA------------------------ATCAGCCTCAGAACA----CAGCAGGTAGGCTTTGTATTTTTGTTGTAATATT------------------TAGTAATATTTT--TGGATACGGAGCTAT---CAAAATTAGTAGTAACT------------AAAATA-TATA--------------------------------------------CGCAATGTGGCAAATAGATCA----AGA-----------AATCGCTAACCAAATTTG------------TTCTTCTTGGATAGATACCATGCGTGCCTCGGAGAAGATGCCGGACGTGCACAC--TAGTGCAAAAAAAACGTCCAAACC-TTCTCCCG-TGGCC--CSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................................................................................................................CGGAGAAGATGCCGGACGTGCC...............................................2211.0010000001000
...............................................................................................................................................................................................................................................................................................................................................................................TCCAAACC-TTCTCCCG-TGGC....2011.0010000001000
droPer2
CC--GAAGCAACTGA------------------------ATCAGCCTCAGAACA----CAGCAGGTAGGCTTTGTATTTTTGTTGTAATATT---------------TAGTAATC---TTTT--TGGATACGGAGCTAT---CAAAATTAGTAGTAACT------------AAAATA-TATA--------------------------------------------GACAATGTGGCAATTAGATCC----AGA-----------AATCGCTAACCAAATTTG------------TTCTTCTTGGATAGATACCATGCGTGCCTCGGAGAAGATGCCGGACGTGCACAC------------------------------------TAG-----SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................................................................................................................................................CCATGCGTGCCTCGGAGAAG.............................................................2011.001010000
droWil2
GCGAG----------------------CAC---CCAGATTTGAATTTAAAGAAACTAGTTTCAGGTTGGCTTTGCCCTATTACTTACCCTATTGACTT-TCA--ACTTA--ATTTTTAATTTATCTGATG---------AT-CTAAATTAGTAGTATTAACTTATCAGCTTAAAAAAAAC-AAACCAAAAAA-----------TA-------T--AGTGACCTGAGGGCAATGTGGACAGCAGAAATCCCCAATCGTCTGTTTACCTATACGAAAATGTTGAATTTTTTATGCAATTTTTTTATTTTAGACAATCCAAAGAGAAATGAGAAGTTCTTGGACGCA----C------------------------A--ATC----GTCAAGCGAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................................................................................................................................................................................................................................................................AAATGAGAAGTTCTTGGACGC..................................................2111.00101000

Generated: 05/19/2015 at 12:30 PM