ID:

dsi_22

 Coordinate:

x:19901655-19901725 -

 Confidence:

Known Ortholog

 Class:

Mirtron

 Genomic Locale:

3pUTR

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.6 -18.4 -18.3

Flybase annnotation

utr3 [utr3_minus_11323]

No Repeatable elements found

Sense Strand Reads

CGCTGATCATACTGCTGAGCTTCATTTATCCCTGCACGTACATCACCAAGGTAAGTGACTATGCCGGGATTGTGGTTATTATACTTAGCGTCTCCACTCACGGCATTTCATTCACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTGAAGGAGGTGATGAAGATCAT

**************************************************.(((((((..((((((.((..((((..................)))))).)))))).....)))))))***************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023

head

 O002

Head

 O001

Testis

 M053

female body

 M024

male body		 M025

embryo

 SRR902009

testis

 SRR553486

Makindu_3 day-old ovaries

 SRR553485

Chicharo_3 day-old ovaries

 SRR553487

NRT_0-2 hours eggs

 SRR553488

RT_0-2 hours eggs

 GSM343915

embryo

 SRR618934

dsim w501 ovaries

 SRR902008

ovaries

 SRR1275485

Male prepupae
...............................................................................................ACTCACGGCATTTCATTCACTTG..................................................... 23 0 1 423.00 423 294 8 6 27 39 25 23 0 1 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACTT...................................................... 22 0 1 326.00 326 79 136 22 17 5 2 24 9 8 8 4 3 4 5 0
...............................................................................................ACTCACGGCATTTCATTCACT....................................................... 21 0 1 325.00 325 73 64 20 4 2 3 3 52 44 30 21 3 4 2 0
...............................................................................................ACTCACGGCATTTCATTCAC........................................................ 20 0 1 163.00 163 10 127 24 0 1 0 0 0 1 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACTTGCAG.................................................. 26 0 1 140.00 140 34 48 13 15 5 9 9 3 0 0 0 2 0 2 0
...............................................................................................ACTCACGGCATTTCATTCACTTGC.................................................... 24 0 1 134.00 134 29 78 12 10 5 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACTTGCA................................................... 25 0 1 73.00 73 22 16 5 13 6 3 2 1 0 1 0 3 0 0 1
...............................................................................................ACTCACGGCATTTCATTCA......................................................... 19 0 1 66.00 66 0 55 10 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTC.......................................................... 18 0 1 60.00 60 1 49 9 0 0 1 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGACTATGCCGGGATTGTGG................................................................................................ 25 0 1 41.00 41 6 0 0 1 4 18 9 2 0 0 0 1 0 0 0
..................................................GTAAGTGACTATGCCGGGAT..................................................................................................... 20 0 1 32.00 32 24 0 0 0 6 1 0 1 0 0 0 0 0 0 0
..................................................GTAAGTGACTATGCCGGGATT.................................................................................................... 21 0 1 29.00 29 18 0 0 0 7 3 0 0 1 0 0 0 0 0 0
..................................................GTAAGTGACTATGCCGGGA...................................................................................................... 19 0 1 15.00 15 8 1 1 0 1 3 0 0 0 0 0 1 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACTTGCAGT................................................. 27 0 1 11.00 11 1 0 0 0 0 2 2 0 1 0 0 5 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACTTGCAA.................................................. 26 1 1 9.00 9 0 0 0 3 0 0 0 1 3 0 2 0 0 0 0
..................................................GTAAGTGACTATGCCGGGATTGT.................................................................................................. 23 0 1 9.00 9 2 0 2 0 1 1 3 0 0 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACTTGCAGA................................................. 27 1 1 7.00 7 0 0 0 0 0 0 0 3 1 3 0 0 0 0 0
..................................................GTAAGTGACTATGCCGGGATTG................................................................................................... 22 0 1 7.00 7 2 0 0 0 0 2 2 0 0 1 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACTTGCAGTA................................................ 28 0 1 6.00 6 0 5 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACC....................................................... 21 1 1 6.00 6 5 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACTGG..................................................... 23 1 1 6.00 6 4 0 0 0 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACTTGA.................................................... 24 1 1 5.00 5 0 0 0 0 2 0 2 1 0 0 0 0 0 0 0
...................................................TAAGTGACTATGCCGGGATTG................................................................................................... 21 0 1 5.00 5 1 0 0 0 0 0 0 1 0 1 1 0 0 1 0
.................................................................................................TCACGGCATTTCATTCACTTGC.................................................... 22 0 1 4.00 4 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACTTGCAAA................................................. 27 2 1 4.00 4 0 0 0 0 0 0 0 0 2 1 1 0 0 0 0
................................................................................................CTCACGGCATTTCATTCACTTG..................................................... 22 0 1 4.00 4 2 0 0 1 0 0 1 0 0 0 0 0 0 0 0
..................................................GTAAGTGACTATGCCGGGATTGTGGTT.............................................................................................. 27 0 1 3.00 3 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0
...................................................TAAGTGACTATGCCGGGATTGT.................................................................................................. 22 0 1 3.00 3 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGACTATGCCGGGATTGTG................................................................................................. 24 0 1 3.00 3 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0
...............................................................................................TCTCACGGCATATCAATCACTTGCA................................................... 25 3 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACG....................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................ATCACGGCATTTCATTCACTT...................................................... 21 1 1 2.00 2 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0
.............................................................................................................................................GAAACAGCTGAAGGAGGTG........... 19 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACTTGCGG.................................................. 26 1 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................CTCACGGCATTTCATTCAC........................................................ 19 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TCACGGCATTTCATTCACTTGCAG.................................................. 24 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGACTATGCCGGGATTGTGT................................................................................................ 25 1 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0
...........................................................................TTATTATACTTAGCGTCTCC............................................................................ 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................CTCACGGCATTTCATTCACTTGCAGT................................................. 26 0 1 2.00 2 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACTTGT.................................................... 24 1 1 2.00 2 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................ACTCACGACATTTCATTCACTTG..................................................... 23 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
CGCTGATCATACTGCTGAGC....................................................................................................................................................... 20 0 1 2.00 2 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGACTATGCCGGGATTGTGGT............................................................................................... 26 0 1 2.00 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0
..................................................................................................TACGGCATTTCATTCACTTG..................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACTTGCAC.................................................. 26 1 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACTCGCGGCATTTCATTCACTTGCAG.................................................. 26 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...............................................................................................ACTCACGGCATATCATTAACTTGCA................................................... 25 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................CAGCTGAAGGAGCTGATGAGG..... 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................................CTCACGGCATTTCATTCACTTGCA................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............GCTGAGCTTCATTTATCCC........................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGACTATGCCGGGATTT................................................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGACTATGCCGGGATG.................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........ATACTGCTGAGCTTCATTTATCCCG.......................................................................................................................................... 25 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................TCACGGCATTTCATTCACTTG..................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGACTATGCCGGGATTGTGGAA.............................................................................................. 27 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................CACGGCATTTCATTCACTTGCAG.................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGACTATGCCGGCATTGTGG................................................................................................ 25 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................GTGAGTGACTATGCCGGGATTGTGG................................................................................................ 25 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................GTACATCACCGCCGAGAAGGAGAAAC......................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...............................................................................................ACTCACGGGATTTCATTCACTTG..................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................GCTCACGGCATTTCATTCACTTGCAG.................................................. 26 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACTCACGGAATTTCATTCACTTG..................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACTTGCAGG................................................. 27 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACTTACGGCATTTCATTCACTT...................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGACTATGCCG......................................................................................................... 16 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................................................TCACGGCATTTCATTCACT....................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGACTATGCCGGGAA..................................................................................................... 20 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................ATTCACGGCATTTCATTCACT....................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................ACATCACCGCCGAGAAGGA.............................. 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....GATCATACTGCTGAGCTT..................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................TATACTTAGCGTCTCCACTCACGGCG.................................................................. 26 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................CTCACGGCATTTCATTCACTTGCAG.................................................. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................GAAACAGCTGAAGGAGGTGATGAA...... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................AAGTGACTATGCCGGGAT..................................................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCTTTCACTTT..................................................... 23 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TAGCGTCTCCACTCACGGCATTTCATT........................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACTCACGGCAGTTCATTCACTT...................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACTTAA.................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTGACTATGCCGGGATTTTGG................................................................................................ 25 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACTTGCCG.................................................. 26 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.................................................................................................TCACGGCATTTCATTCACTTGCA................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...TGATCATACTGCTGAGCT...................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................CTATGCCGGGATTGTGGTT.............................................................................................. 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCTTTCACC....................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACTCATGGCATTTCATTCACTT...................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....ATCATACTGCTGAGCTTCATTTATCCCT.......................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................ACTGACGGCATTTCATTCACTTG..................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................GAAGTGACTATGCCGGGATTGTAA................................................................................................ 24 3 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................GTAAGTGACTATGCCGGGATTGG.................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CACTCACGGCATTTCATTCACT....................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................AATCACGGCATTTCATTCACT....................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................TCACGGCATTTCATTCACTTGCAGT................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..................................................GTAAGTGACTATGCCGGGG...................................................................................................... 19 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCACTCACTTGCAG.................................................. 26 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................CTCACGGCATTTCATTCACTTGC.................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................CACGGCATTTCATTCACTTGC.................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..............................................................................TTATACTTAGCGTCTCCACTCACGGCA.................................................................. 27 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................ACTCACGTCATTTCATTCACTTG..................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACTCACGGCATGTCATTCACTTGCAG.................................................. 26 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................TCTCACGGCATATCAATCACTTGCAG.................................................. 26 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................ATTTCATTCACTTGCA................................................... 16 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................................................TCACGGCATTTCATTCAC........................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...TGATCATACTGCTGAGCTTCATTTATC............................................................................................................................................. 27 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................GTAAGTGACTATGCCGGGATTGAA................................................................................................. 24 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...............................................................................................AGTCACGGCATTTCATTCACT....................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................TCACGGCATTTCATTCACTT...................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................CTTAGCGTCTCCACTCACGGC................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................ATTCACGGCATTTCATTCACTT...................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...............................................................................................ACTCACGGCATTTCATTCACTTGCAGTT................................................ 28 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................TTATTATACTTAGCGTCTCCACT......................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACTCACTGCATTTCATTCACTTG..................................................... 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTCCCTTGCAGT................................................. 27 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
............................................................................TATTATACTTAGCGTCTCCACTCACGGCA.................................................................. 29 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
................................................................................................CTCACGGCATTTCATTCACTTGCT................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................TTCACGGCATTTCATTCACTTGC.................................................... 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................TATGCCGGGATTGTGGTTATT........................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................................................................GTAGAAACAGCTGAAGGAGGT............ 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................TAAGTGACTATGCCGGGATTGTGG................................................................................................ 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
....................................................AAGTGATTATGCCGG........................................................................................................ 15 1 7 0.71 5 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0
....................................................AAGTGATTATGCCGGAAT..................................................................................................... 18 2 3 0.67 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0
.....................................................AGTGACTACGCCGGG....................................................................................................... 15 1 5 0.60 3 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0
...............................................................................................TCTCACGGCATATCAATCACTT...................................................... 22 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................ACCACGGCATTTCATTCACT....................................................... 20 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.......................................................................................................................................TAAAGAGATACAGCTGAAGGAG.............. 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...................................................CAAGTGACTATGCCGG........................................................................................................ 16 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.....................................................AGTGATTATGCCGGAAT..................................................................................................... 17 2 13 0.31 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0
..................................................GCAAGTGATTATGCCGG........................................................................................................ 17 2 17 0.24 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0
.................................................TGTAAGTGATTATGCCGG........................................................................................................ 18 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..............................................................................................................TTCAGTGGCAGAACATCACC......................................... 20 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................CGACTCCACTCACGG.................................................................... 15 1 10 0.10 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................CACCGACCAGAAGGAGAAGCA........................ 21 3 14 0.07 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
................................................AGGTAATTGACTATGCA.......................................................................................................... 17 2 18 0.06 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................................AGCGTCTCAACACACGGG................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................TTTCATTCACTTGCAA.................................................. 16 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
....................................................AAGTGATTATGCCGGAATG.................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

GCGACTAGTATGACGACTCGAAGTAAATAGGGACGTGCATGTAGTGGTTCCATTCACTGATACGGCCCTAACACCAATAATATGAATCGCAGAGGTGAGTGCCGTAAAGTAAGTGAACGTCATGTAGTGGCGGCTCTTCCTCTTTGTCGACTTCCTCCACTACTTCTAGTA

*****************************************************.(((((((..((((((.((..((((..................)))))).)))))).....)))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486

Makindu_3 day-old ovaries

 SRR618934

dsim w501 ovaries

 SRR902009

testis

 M023

head

 SRR553488

RT_0-2 hours eggs
.................................................CCATTCACTGATACGGCCCTA..................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
.......................................................ACTGCTCCGGCCCTAACACAA............................................................................................... 21 3 3 0.33 1 0 1 0 0 0
...............................................................................................................................TGGCTGCTCTTGGTCTTTGTCG...................... 22 3 3 0.33 1 0 0 1 0 0
............................................................GACGGCCCTAACACCA............................................................................................... 16 1 4 0.25 1 0 1 0 0 0
.............................................................................................................................AGTGGAGGCTCTTCCT.............................. 16 1 7 0.14 1 0 1 0 0 0
................................................................GCCCTAACACAAATAA........................................................................................... 16 1 8 0.13 1 0 1 0 0 0
........................................................................................GAAGAAGTGAGTGCCGCAA................................................................ 19 3 17 0.06 1 0 0 0 1 0
...........................................................CTACGGCCCTAACACAA............................................................................................... 17 2 18 0.06 1 0 1 0 0 0
.............................................................ACGGCCCTAACACAA............................................................................................... 15 1 19 0.05 1 0 1 0 0 0
..........................................................................................AGTAGTGAGTGCCGTAACG.............................................................. 19 3 20 0.05 1 0 0 0 0 1
.............................................................................TGATGAGAATCGCAGAGG............................................................................ 18 3 20 0.05 1 0 1 0 0 0
...............................................................................................................AGTGAACGTCAAGTA............................................. 15 1 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSim2 x:19901607-19901775 - dsi_22 confident CGCTGATCATACTGCTGAGCTTCATTTATCCCTGCACGTACATCACCAAGGTAAGTGA--------CTATGCCG------GGATTG--------TGGTTATTATAC------TT-------AGCGTCTCC------ACTCACGGCAT-TTC--ATTCACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTGAAGGAGGTGATGAAGATC
droSec2 scaffold_8:3476261-3476429 - dse_87 confident CGCTGATCATACTGCTGAGCTTCATTTATCCCTGCACGTACATCACCAAGGTAAGTGA--------CTATGCCG------GGATTG--------TGGTTATTATAC------TT-------AGAGTCTCC------ACTCACGGCAT-TTC--ATTCACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTGAAGGAGGTGATGAAGATC
dm3 chrX:21169254-21169422 - dme-mir-2535b Known_mirbase CGCTGATCATACTGTTGAGCTTCATTTATCCCTGCACGTACATCACTAAGGTAAGTGA--------CTATGCCG------GGATTG--------TGGTTATTGAAC------TT-------AGCGTCTCC------ACTCACGGCAT-TTC--ATTCACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTGAAGGAGGTGATGAAGATC
droEre2 scaffold_4690:17698611-17698779 - der_64 confident CGCTGATCATACTGTTGAGCTTTATTTATCCCTGCACGTACATCACCAAGGTAAGTGA--------CAGTGCCG------GGATTG--------TGGTTATTAAAA------AT-------ACCTTCTCC------ACTCACGGCAT-TTC--ATTCACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTCAAGGAGGTGATGAAGATC
droYak3 X:20344977-20345145 - dya_174 confident CGCTGATCATACTGCTGAGCTTTATTTACCCATGCACGTACATCACCAAGGTAAGTGA--------CAATGCCG------GGATTG--------TGGTTATTGAAA------AT-------ACCTTCTCC------ACTCACGGCAT-TAT--ATTCACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTCAAGGAGGTGATGAAGATC
droEug1 scf7180000408193:312993-313161 + CGCTGATCATACTGTTGAGCTTCATCTATCCATGCACGTATATCACCAAGGTAAGTGG--------CTATGCCG------GGATCG--------TGGTTGATCTAT------GT-------ACCTTCTCC------ACTCACGGCAT-TTC--ATTCACTTGTAGTACATCACCGCTGAAAAGGAGAAGCAGCTCAAGGAGGTAATGAAGATC
droBia1 scf7180000302187:362196-362366 + CGCTGATCATACTGCTCAGCTTCATCTACCCCTGCACGTACATCACCAAAGTAAGTGG--------CCATGCCG------GGATTG--------TGGTTTAA---C-------CAGA-GGTTCCTCCTCC------ACTCACGGCAT-TTC--ATTCACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTCAAGGAGGTGATGAAGATC
droTak1 scf7180000415158:278047-278218 + CGCTGATCATACTGCTGAGCTTCATCTATCCCTGCACGTACATCACCAAGGTAAGTGG--------CTATGCCG------GGATTG--------TGGTTTACAATA---------GAAAG-ATCCCCTCC------ACTCACGGCAT-TTC--ATTCACTTGCAGTACATCACCGCCGAGAAGGAGAAGCAGCTGAAGGAGGTGATGAAGATC
droEle1 scf7180000490214:747345-747513 + CGCTAATCATACTGCTGAGCTTCATCTATCCGTGCACGTACATCACCAAGGTAAGTGG--------GTATGCCG------GGACTG--------TGGTTCTAAATG------CC-------ATCACCACC------ACTCACGGCAT-TTC--ATTCACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTCAAGGAGGTGATGAAGATC
droRho1 scf7180000780082:43736-43900 + CGCTGATCATACTGCTGAGCTTCATCTATCCCTGCACGTACATCACCAAGGTAAGTGG--------GTATGCCG------GGATTG--------TGGTTAAT----------AC-------ACCTCCTCC------ACTCACGGCAT-TTC--ATTCACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTGAAGGAGGTGATGAAGATC
droFic1 scf7180000454077:620809-620969 - CGTTGATTATACTGCTCAGCTTCATTTATCCCTGCACGTACATCACCAAGGTAAGTTT--------ATATTTATTT-GTGTTGGT---------------------------GT-------ACCTCCTCC------ACTCACAACAT-TTC--ATTCACCTGCAGTTCATTACCGCCGAGAAGGAGAAGCAGCTCAAGGAGGTGATGAAGATC
droKik1 scf7180000302395:540374-540537 - CACTGATCATCTTGCTGAGCTTCATCTATCCGTGCACGTACATCACCAAGGTAAGTCT-------------CCGAGAACGGGAACGAATCGCACAGATCCATATCT------GT-------AT------------------C--TGT-ATC--CTTCTTGTGTAGTACATCACCGCCGAGAAGGAGAAGCAGCTCAAGGAGGTGATGAAGATC
droAna3 scaffold_13337:14423183-14423280 - CGTTCATTATTATGCTGAGCTTTATATATCCTAGCACCGTGGTCGCCAGAG-------------------------------------------------------------------------------------------------------------------CCGTAACCAACGAAAAGGAGCTGCAGTTGAAGGAGATCATGAAGCTA
droBip1 scf7180000396733:700607-700770 + CGCTGATCATACTGCTCAGTTTCATATATCCCTGCACGTATATAACAAAGGTGAGAGGGACGAGGTCTATA----------------------------GCTTTCGGGTTGTGT-------A------AT------ACTTTAAATATTTTA--TTCCAATTTCAGTATATAACCGCCGAAAAGGAAAAACAACTGAAGGAAGTCATGAAGATC
dp5 XL_group1a:9058655-9058823 + dps-mir-2535 Known_mirbase CGCTGATTATCCTCCTCAGCTTCATCTATCCGTGCACGTACATCACAAAGGTAAGTGG--------CTATGCCGCG-ACGGGATTG--------A---------AC------CT-CT-CAT-CTCTCACC------TCTCACGGCAT-ATC--AATCACTTGCAGTACATCACCGCCGAGAAGGAGAAGCAGCTCAAGGAGGTAATGAAGATC
droPer2 scaffold_15:1452109-1452277 + dpe_344 confident CGCTGATTATCCTCCTCAGCTTCATCTATCCGTGCACGTACATCACAAAGGTAAGTGG--------CTATGCCGCG-ACGGGATTG--------A---------AC------CT-CT-CAT-CTCTCACC------TCTCACGGCAT-ATC--AATCACTTGCAGTACATCACCGCCGAGAAGGAGAAGCAGCTTAAGGAGGTAATGAAGATC
droWil2 scf2_1100000004515:164746-164809 - --------------------------------------------------------------------------------------------------------------------------------------------------T-TTG--TTTTTCTTACAGTACATTACATCGGAGAAGGAGAAACAACTGAAGGAGGTGATGAAAATA
droVir3 scaffold_12970:7928278-7928357 - C------------------------------------------------------------------------------------------------------------------------------TCT------TCTCACGACAT-CCCTTAATCCCTTGCAGTACGTTGCCAACGAAAAGGAATTGCAACTGAAGGAGGTCATGAAAATA
droMoj3 scaffold_6482:1598811-1598875 + -------------------------------------------------------------------------------------------------------------------------------------------------AT-TTC--GTCGCCTTACAGTACATCTCCAAGGAGAAGGAAATGCAGTTGAAGGAAGTGATGAAGATA
droGri2 scaffold_15203:11132581-11132749 + CATTGATAATACTGCTGAGCTTCATCTATCCCTGTACCTACATTACTAAGGTATGTT--------------CGA------TGATTT--------TGGTTTTTTTTGGCT---TT-------ACTTTCACCGTTTACAC---GACAAT-TTC--ATCCTTTTGCAGTACGTGACCAGTGAGAAGGAGAAGCAGCTGAAGGAGGTGATGAAAATA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CGCTGATCATACTGCTGAGCTTCATTTATCCCTGCACGTACATCACCAAGGTAAGTGA--------CTATGCCG------GGATTG--------TGGTTATTATAC------TT-------AGCGTCTCC------ACTCACGGCAT-TTC--ATTCACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTGAAGGAGGTGATGAAGATCSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTG...................................................231423.0042329439252768100000023000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTT....................................................221326.0032679521722136898443524000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACT.....................................................211325.00325732342064445230214323000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCAC......................................................201163.00163101002412710000000000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAG................................................261140.00140345915134803000229000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGC..................................................241134.00134295010127800000000000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCA.................................................25173.007322631351601100302010
........................................................................................................................................ACTCACGGCAT-TTC--ATTCA.......................................................19166.00660000105500000001000
........................................................................................................................................ACTCACGGCAT-TTC--ATTC........................................................18160.0060101094900000000000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGG....................................................................................................................25141.0041641810002000109000
..................................................GTAAGTGA--------CTATGCCG------GGAT.................................................................................................................................20132.0032246100001000000000
..................................................GTAAGTGA--------CTATGCCG------GGATT................................................................................................................................21129.0029187300010000000000
..................................................GTAAGTGA--------CTATGCCG------GGA..................................................................................................................................19115.001581301100000100000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAGT...............................................27111.001110200010000502000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAA................................................2619.00900030031020000000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------T......................................................................................................................2319.00921102000000003000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAGA...............................................2717.00700000013300000000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------.......................................................................................................................2217.00720200000100002000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAGTA..............................................2816.00600001500000000000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACC.....................................................2116.00651000000000000000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGA..................................................2415.00502000001000002000
...................................................TAAGTGA--------CTATGCCG------GGATTG--------.......................................................................................................................2115.00510000001110010000
..........................................................................................................................................TCACGGCAT-TTC--ATTCACTTGC..................................................2214.00420000100000001000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAAA...............................................2714.00400000020110000000
.........................................................................................................................................CTCACGGCAT-TTC--ATTCACTTG...................................................2214.00420010000000001000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGGTT..................................................................................................................2713.00302100000000000000
...................................................TAAGTGA--------CTATGCCG------GGATTG--------T......................................................................................................................2213.00312000000000000000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TG.....................................................................................................................2413.00310100000000100000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACG.....................................................2112.00220000000000000000
.........................................................................................................................................................................................GAAACAGCTGAAGGAGGTG.........1912.00200200000000000000
.........................................................................................................................................CTCACGGCAT-TTC--ATTCAC......................................................1912.00200000200000000000
..........................................................................................................................................TCACGGCAT-TTC--ATTCACTTGCAG................................................2412.00200001100000000000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGT....................................................................................................................2512.00200200000000000000
.................................................................................................TTATTATAC------TT-------AGCGTCTCC------.............................................................................2012.00220000000000000000
.........................................................................................................................................CTCACGGCAT-TTC--ATTCACTTGCAGT...............................................2612.00200110000000000000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGT..................................................2412.00201100000000000000
CGCTGATCATACTGCTGAGC.................................................................................................................................................................................................2012.00200110000000000000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGGT...................................................................................................................2612.00200100000001000000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAC................................................2612.00210010000000000000
.........................................................................................................................................CTCACGGCAT-TTC--ATTCACTTGCA.................................................2411.00100000100000000000
.............GCTGAGCTTCATTTATCCC.....................................................................................................................................................................................1911.00100100000000000000
..................................................GTAAGTGA--------CTATGCCG------GGATTT--------.......................................................................................................................2211.00101000000000000000
..................................................GTAAGTGA--------CTATGCCG------GGATG................................................................................................................................2111.00101000000000000000
........ATACTGCTGAGCTTCATTTATCCCG....................................................................................................................................................................................2511.00100100000000000000
..........................................................................................................................................TCACGGCAT-TTC--ATTCACTTG...................................................2111.00110000000000000000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGGAA..................................................................................................................2711.00100100000000000000
...........................................................................................................................................CACGGCAT-TTC--ATTCACTTGCAG................................................2311.00110000000000000000
....................................................................................................................................................................GTACATCACCGCCGAGAAGGAGAAAC.......................2611.00100000000000100000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAGG...............................................2711.00101000000000000000
..................................................GTAAGTGA--------CTATGCCG------.....................................................................................................................................1611.00100000000001000000
..........................................................................................................................................TCACGGCAT-TTC--ATTCACT.....................................................1911.00100000100000000000
..................................................GTAAGTGA--------CTATGCCG------GGAA.................................................................................................................................2011.00100100000000000000
......................................................................................................................................................................ACATCACCGCCGAGAAGGA............................1911.00100001000000000000
....GATCATACTGCTGAGCTT...............................................................................................................................................................................................1811.00100010000000000000
.....................................................................................................TATAC------TT-------AGCGTCTCC------ACTCACGGCG...................................................................2611.00100000001000000000
.........................................................................................................................................CTCACGGCAT-TTC--ATTCACTTGCAG................................................2511.00100010000000000000
.........................................................................................................................................................................................GAAACAGCTGAAGGAGGTGATGAA....2411.00100010000000000000
....................................................AAGTGA--------CTATGCCG------GGAT.................................................................................................................................1811.00101000000000000000
.................................................................................................................T-------AGCGTCTCC------ACTCACGGCAT-TTC--ATT.........................................................2711.00100010000000000000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTAA..................................................2411.00110000000000000000
..........................................................................................................................................TCACGGCAT-TTC--ATTCACTTGCA.................................................2311.00100000100000000000
...TGATCATACTGCTGAGCT................................................................................................................................................................................................1811.00100100000000000000
..................................................................CTATGCCG------GGATTG--------TGGTT..................................................................................................................1911.00100010000000000000
.....ATCATACTGCTGAGCTTCATTTATCCCT....................................................................................................................................................................................2811.00100100000000000000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------G......................................................................................................................2311.00110000000000000000
.................................................................................................................................C------ACTCACGGCAT-TTC--ATTCACT.....................................................2211.00100000100000000000
..........................................................................................................................................TCACGGCAT-TTC--ATTCACTTGCAGT...............................................2511.00100000000000100000
..................................................GTAAGTGA--------CTATGCCG------GGG..................................................................................................................................1911.00101000000000000000
.........................................................................................................................................CTCACGGCAT-TTC--ATTCACTTGC..................................................2311.00100000100000000000
...........................................................................................................................................CACGGCAT-TTC--ATTCACTTGC..................................................2111.00100000000001000000
....................................................................................................TTATAC------TT-------AGCGTCTCC------ACTCACGGCA...................................................................2711.00100000001000000000
.................................................................................................................................................AT-TTC--ATTCACTTGCA.................................................1611.00100000000001000000
..........................................................................................................................................TCACGGCAT-TTC--ATTCAC......................................................1811.00110000000000000000
...TGATCATACTGCTGAGCTTCATTTATC.......................................................................................................................................................................................2711.00100000001000000000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------AA.....................................................................................................................2411.00100000000000010000
..........................................................................................................................................TCACGGCAT-TTC--ATTCACTT....................................................2011.00100000100000000000
.........................................................................................................C------TT-------AGCGTCTCC------ACTCACGGC....................................................................2111.00101000000000000000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAGTT..............................................2811.00100010000000000000
.................................................................................................TTATTATAC------TT-------AGCGTCTCC------ACT..........................................................................2311.00110000000000000000
..................................................................................................TATTATAC------TT-------AGCGTCTCC------ACTCACGGCA...................................................................2911.00100000010000000000
.........................................................................................................................................CTCACGGCAT-TTC--ATTCACTTGCT.................................................2411.00110000000000000000
...................................................................TATGCCG------GGATTG--------TGGTTATT...............................................................................................................2111.00100000000000100000
...................................................TAAGTGA--------CTATGCCG------GGATTG--------TGG....................................................................................................................2411.00100000000000010000
..................................................................................................................................................T-TTC--ATTCACTTGCAA................................................16200.05100000000010000000
droSec2
CGCTGATCATACTGCTGAGCTTCATTTATCCCTGCACGTACATCACCAAGGTAAGTGA--------CTATGCCG------GGATTG--------TGGTTATTATAC------TT-------AGAGTCTCC------ACTCACGGCAT-TTC--ATTCACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTGAAGGAGGTGATGAAGATCSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTG...................................................231170.00170169001
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAG................................................261166.00166152158
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCA.................................................251150.00150146211
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTT....................................................221105.00105550347
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGC..................................................24177.007776001
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACT.....................................................21171.0071241046
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAGT...............................................27165.00651253018
..........................................................................................................................................TCACGGCAT-TTC--ATTCACTTGCAGT...............................................25125.002541155
.........................................................................................................................................CTCACGGCAT-TTC--ATTCACTTGCAG................................................25117.001716001
.........................................................................................................................................CTCACGGCAT-TTC--ATTCACTTG...................................................22116.001616000
.........................................................................................................................................CTCACGGCAT-TTC--ATTCACTTGCA.................................................24113.001312001
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGG....................................................................................................................25111.00110083
..........................................................................................................................................TCACGGCAT-TTC--ATTCACTTGCAG................................................24110.00108002
.........................................................................................................................................CTCACGGCAT-TTC--ATTCACTTGC..................................................2319.0099000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------T......................................................................................................................2317.0071312
..........................................................................................................................................TCACGGCAT-TTC--ATTCACTTGC..................................................2216.0064002
...................................................TAAGTGA--------CTATGCCG------GGATTG--------.......................................................................................................................2116.0062220
.........................................................................................................................................CTCACGGCAT-TTC--ATTCACTT....................................................2116.0066000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAA................................................2615.0055000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGT..................................................2415.0055000
..................................................GTAAGTGA--------CTATGCCG------GGAT.................................................................................................................................2014.0041111
....................................................AAGTGA--------CTATGCCG------GGATTG--------TGGTT..................................................................................................................2514.0040301
........................................................GA--------CTATGCCG------GGATTG--------TGGTTATT...............................................................................................................2414.0042020
.........................................................................................................................................CTCACGGCAT-TTC--ATTCACTTGCAGT...............................................2614.0042020
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------.......................................................................................................................2214.0041201
..........................................................................................................................................TCACGGCAT-TTC--ATTCACTTGCA.................................................2313.0032001
.........................................................................................................................................CTCACGGCAT-TTC--ATTCACT.....................................................2013.0033000
...................................................TAAGTGA--------CTATGCCG------GGATTG--------T......................................................................................................................2213.0030111
..................................................GTAAGTGA--------CTATGCCG------GGATT................................................................................................................................2113.0031200
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAGA...............................................2713.0032010
........................................................................................................................................ACTCACGGCAT-TTC--ATTCAC......................................................2013.0032001
...........................................................................................................................AGTCTCC------ACTCACGGCAT-TTC--ATTC........................................................2512.0022000
........................................................................................................AC------TT-------AGAGTCTCC------ACTCAC.......................................................................1912.0022000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TG.....................................................................................................................2412.0020020
.......................................................................................................TAC------TT-------AGAGTCTCC------ACTCACGGCA...................................................................2412.0022000
........................................................GA--------CTATGCCG------GGATTG--------TGGTTA.................................................................................................................2212.0020020
..................................................................CTATGCCG------GGATTG--------TGGTTATTA..............................................................................................................2312.0021100
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGGTT..................................................................................................................2712.0020110
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGA..................................................2412.0022000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAC................................................2612.0022000
........................................................GA--------CTATGCCG------GGATTG--------TGGTT..................................................................................................................2112.0020200
..........................................................................................................................................TCACGGCAT-TTC--ATTCACTTGCAGA...............................................2512.0020020
.................................................................................................................................................AT-TTC--ATTCACTTGCAGT...............................................1812.0020020
................................................................................................................TT-------AGAGTCTCC------ACTCACGGCA...................................................................2112.0022000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTT...................................................2312.0022000
..........................................................................................................................................TCACGGCAT-TTC--ATTCACTTG...................................................2112.0020002
.................................................................................................................................C------ACTCACGGCAT-TTC--ATTCACTTG...................................................2412.0022000
.....................................................................................................TATAC------TT-------AGAGTCTCC------ACTCACGGCA...................................................................2611.0010010
..................................................................CTATGCCG------GGATTG--------TGGTTATT...............................................................................................................2211.0010100
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCACA...............................................2711.0011000
.............................................................................................................................................CGGCAT-TTC--ATTCACTTGCAGTTT.............................................2411.0011000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAT................................................2611.0010010
......................................................GTGA--------CTATGCCG------GGATTG--------TGGTT..................................................................................................................2311.0010100
....................................................AAGTGA--------CTATGCCG------GGATTG--------.......................................................................................................................2011.0010100
.................................................................................................TTATTATAC------TT-------AGAGTCTCC------ACTCACGGC....................................................................2911.0011000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAGTT..............................................2811.0011000
.........................................................................................................................................CTCACGGCAT-TTC--ATTCACTTGCG.................................................2411.0011000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCA.......................................................1911.0010010
........................................................GA--------CTATGCCG------GGATTG--------TGGTTAT................................................................................................................2311.0010100
.........................................................A--------CTATGCCG------GGATTG--------TGG....................................................................................................................1811.0011000
.........................................................................................................................................CTCACGGCAT-TTC--ATTCACTTGT..................................................2311.0010001
.......................................................TGA--------CTATGCCG------GGATTG--------TGGTTATTA..............................................................................................................2611.0011000
.................................................................................................................T-------AGAGTCTCC------ACTCACGGCAT-TTC--ATT.........................................................2711.0010100
....................................................AAGTGA--------CTATGCCG------GGATTG--------TGGTTAT................................................................................................................2711.0011000
.......................................................................................................................................................................................GAGAAACAGCTGAAGGAGGT..........2011.0010010
...................................................TAAGTGA--------CTATGCCG------GGATTG--------TT.....................................................................................................................2311.0011000
.........................................................................................................................................CTCACGGCAT-TTC--ATTCACTTGA..................................................2311.0011000
...........................................................................................................................................CACGGCAT-TTC--ATTCACTTGCAGTTT.............................................2611.0011000
.........................................................................................................................................................................................GAAACAGCTGAAGGAGGT..........1811.0010010
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACG.....................................................2111.0011000
..............................................................................................................................CTCC------ACTCACGGCAT-TTC--ATTCACTT....................................................2611.0010010
.....................................................................................................TATAC------TT-------AGAGTCTCC------ACTCACGGC....................................................................2511.0011000
...........................................................................................................................................CACGGCAT-TTC--ATTCACTTG...................................................2011.0011000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGGA...................................................................................................................2611.0011000
...................................................................................................ATTATAC------TT-------AGAGTCTCC------ACTCACGGCA...................................................................2811.0010001
................................................................................................................................................CAT-TTC--ATTCACTTGCAGTT..............................................2011.0010100
..........................................................................................................................................................................................AAACAGCTGAAGGAGGTGAT.......2011.0010010
..........................................................................................................................................TCACGGCAT-TTC--ATTCACTT....................................................2011.0010001
...................................................................TATGCCG------GGATTG--------TGGTTAT................................................................................................................2011.0011000
...........................................................................................................................................CACGGCAT-TTC--ATTCACTTGCAGT...............................................2411.0011000
......................................................GTGA--------CTATGCCG------GGATTG--------TGGTTA.................................................................................................................2411.0010100
..............CTGAGCTTCATTTATCCCTGCACGTA.............................................................................................................................................................................2611.0010010
....................................................AAGTGA--------CTATGCCG------GGATTG--------TGT....................................................................................................................2311.0010001
.............................................................................................................................................CGGCAT-TTC--ATTCACTTGC..................................................1911.0011000
..................................................GTAAGTGA--------CTATGCCG------GG...................................................................................................................................1811.0010001
CGCTGATCATACTGCTGAGC.................................................................................................................................................................................................2011.0010010
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGGT...................................................................................................................2611.0010100
........................................................................................................AC------TT-------AGAGTCTCC------ACTCACGGC....................................................................2211.0011000
............................................................................................................................................ACGGCAT-TTC--ATTCACTTGCA.................................................2111.0011000
....................................................AAGTGA--------CTATGCCG------GGATTG--------TGGTTATT...............................................................................................................2811.0011000
......................................................................................................ATAC------TT-------AGAGTCTCC------ACTCACGGCA...................................................................2511.0010100
.........................................................................................................C------TT-------AGAGTCTCC------ACTCACGGCA...................................................................2211.0011000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTA...................................................2311.0010001
...................................................................................................ATTATAC------TT-------AGAGTCTCC------ACT..........................................................................2111.0010010
..................................................................................................................................................T-TTC--ATTCACTTGCAGTT..............................................1840.2511000
dm3
CGCTGATCATACTGTTGAGCTTCATTTATCCCTGCACGTACATCACTAAGGTAAGTGA--------CTATGCCG------GGATTG--------TGGTTATTGAAC------TT-------AGCGTCTCC------ACTCACGGCAT-TTC--ATTCACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTGAAGGAGGTGATGAAGATCSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTT....................................................2211462.00146200000000000000000100000000102223280310000002000102111010009320000000000000000067551003000000040310200004270212010010000018604040704098000000000001100020006000000000300000821320641050302242925157400010174424100010130000001000000001010001010011200240000000147020021130100023002000210510310635213643217020201513193900000000020011090045020002100021600021028560
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAG................................................2611149.00114900001000000000000000000000003348430101112202200001300210003134400000000000000000115662000001000220130200211606100000010000100002050100200000000000100000011150100000000000002318011004513573170262000002020540000093000000000000000002048122235108894100208000030014001002102130230001000121232203292942607121002031440001003214011543124303000140001500011112230
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCA.................................................251915.0091500001000000001200000100000003000000200200000030000120000252580000000000000000071813222300101100010240200011150717000010000012000003000010000000000010000200215000000000000000132008008410393703700000026104000000200000000000000301320122101410452230018110000002101020101223052622001100204501008010503051103312730014100000001363020103100221000800000011000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACT.....................................................211825.0082500001000000000100000000200001014111000010000100010100100000120000000000000000004421008000010200000400017036500000000002052102130302210000000000110001010300000000000010035610220020120141511590000109020200000010000000000000030000000101000010080000000264020128452002112011120080411111173163412412200191372200001002000010010018121000010011901014046580
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGC..................................................241696.006960000000000000020020000000000100000000110001000000001000029451200000000000000000182492100100000001101700000190500000000000000000000000000000000000010001000070000110002020050303001809210120034003000000000100000000000000031010024112031105400023300001000000100010242062100000000003010001000300020000201430101101000001214010000100020000210000003010
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGG....................................................................................................................251605.006050000000000000000000000000000000000000100000000000001000000000000000000000000000000001010000000300000020000000000000000000000000001000000000000000000010000000000000001001000000010200000000012000000000000000000001001121400225451004000000000100100101031100100010110030000406170311010032292211009111100024347309126060641801007213151250146122170
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAGT...............................................271486.00486000000000000000000000000000000000000000000220250102200008600000000000000000000020000000000000000000010000000000000000000000000000000000000010000010017000000000000000430000030100012000000304200000400000000000000000291301020000200110000210626220323720022021141100402214101153117382141120043335213200512513205127212129007241001740401061116200
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTG...................................................231458.00458000000000000001000000000000001106010000000010100000000000363414000000000000000001312581000001010000020000013100021000000000000000020000000000000000000000001110000000005000702401100611306019001010800000000000000000000000010000001164210212107500000000000000000112002010000001102100000000100130004201700000000000000013000120000000000410100000000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------.......................................................................................................................221395.0039500000000000000000000000000001000001000000000000000000000000000000000000000000000010000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000010000000000000000000018300021000111120000000000001000000019100000000703020110002110501200200010120100000021121001422722722401612003200111113140
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TG.....................................................................................................................241251.002510000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000001001001000000000000000000000000000000000000000010000000000000004803110001020010000000010100111000110910000100061100000000001241120080000011001001100091001315604374015312070000200161290
..........................................................................................................................................TCACGGCAT-TTC--ATTCACTTGCAGT...............................................251182.001820000000000010000000000000000000000001000001000002010000000000000000000000000020000000010000000010000000001000010000000000000000000000000000001000000040000000000000000000001000001000000004041000701000000000000008021200000000000005000031000011000301003201105020012314320000011004460010100000000200110020011612900290000100101054480
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------T......................................................................................................................231136.00136000000000000000000000000000000000000010000000100000000001000000000000000000000000000000000000010000000001021000000000000000000000000000000000000100000000300000000000110000000000000000000000000010200000000004000200001310131220000000000000100100000000011001100000021000000006120014002101220011000020210111433650372102700005072010
.........................................................................................................................................CTCACGGCAT-TTC--ATTCACTTGCAGT...............................................26186.00860000000000000000000000000000000000001000000000000000000010000000000000000000000000000000001000000000000000000000000000000000000010000000000000000000010000000000000000000000000000000000002120000102000000000000000201400100101001003000000020002000000000101002000010120000000210102010100211001001100000020001115001111101000000001510
..................................................GTAAGTGA--------CTATGCCG------GGATT................................................................................................................................21183.0083000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000100000000000001000000000000000001000000000000000000000000000000000000000000000000000000000000000000001002120111000100000000000000000000110000100001040100010001100420001101010200001010111000202690242100010000040250
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAA................................................26167.0067000000000000000000000000000000000000100000000101000000000000000000000000000000110000000000000020000000000000000000000000000000000000000000000000001000000000000000000200200110101060000000001000000000000001000000000000001111020300600000000000000000000000000000000000000033618010000010010000000000000002000000000000000000002000000
...................................................TAAGTGA--------CTATGCCG------GGATTG--------T......................................................................................................................22154.0054000000000000000000000000000000000001000000000000000000000000000000000000000000100000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000100000200000000000200000000000100000001000000010000020000000000000100001000201002143000900001210001023140
...................................................TAAGTGA--------CTATGCCG------GGATTG--------TGG....................................................................................................................24151.005100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001010000000000000000000010000000000000000000000000000100000000000000000000000001070030010201011000000113420
..........................................................................................................................................TCACGGCAT-TTC--ATTCACTTGCA.................................................23150.0050000000000100000000000000000000000000000000000000000000000010000000000000000020000000001000010010000003000100000000000001000100001000000000000000000000000000000000000120200230104030000007001000000000000000000000000000000000000100000000000010000010000000010000001001000000010001000000000000000000000000000000000000000000000010010
..........................................................................................................................................TCACGGCAT-TTC--ATTCACTTGCAG................................................24145.0045000000000000001000000000000000000000000000000000000000000200000000000000000023111000000000000010000005020030000000001000000100000000000000000000000001000000000000000000200020000000000000001000000000000000000000002000000100000100100000000000000000000001000001001002001000000000000000000000000000000000000100000000000000000020100
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGGT...................................................................................................................26140.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000011001420001000000000000000000000000000000000000000000000000000000000010000003000110002104310401101000003011000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGATC................................................26139.003900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002811000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCA.......................................................19139.0039000000000000000000000000000010000000001000000000000000001000000000000000000020200000000000000000000000000000000000000020010000000000000000000000000000000000000000000110000100012155000003000000000000000000000000000000000000000000000000000000000200000000000000001000000000000000000011040000000000000000000000000000000000000000000
.........................................................................................................................................CTCACGGCAT-TTC--ATTCACTTGCA.................................................24136.0036000000000000000000000000000000000000000000000000000000001000000000000000000000011000000000000010000000000000000000001000000100000000000000000000000003000000000000000020000000100050000001000000000000000000000000000000101000000200400000000000000010100000000000000001100000000000000000010000000000000011000000000000000100010010000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAGA...............................................27136.0036000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000120000030003040000001020000000000000000000000000000000003001400101000000000000000000010000000000000000010101010000010000000000000001000000000100001000000000000000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCATC...............................................27133.003300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................TCACGGCAT-TTC--ATTCACTTGC..................................................22131.0031000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000010000000000000000000500000000000000000000000000000000000000000000000000100100100001000000002000000000000000000000000001000101000000000000000000000000000100010100000000010000000000000000000020000000000000000000400000000000000000023000
.................................................................................................TTATTGAAC------TT-------AGCGTCTCC------.............................................................................20130.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000010000000000000000000000000000000100000000000000000300200010000005000000000000000000000000000000000000000000100001000000000000000000100010000000000000000000000000100001000000010010001100000111000100000000000001000
...................................................TAAGTGA--------CTATGCCG------GGATTG--------.......................................................................................................................21125.0025000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110002000000000000000000000000100000000000000000100000000000000001100000000001100000000021610000000110000002000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGGTT..................................................................................................................27123.0023000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000100000000000000000000000000000000000000100000000000000000000001000000000000000000000000000000000000000000000000200002100130003010310000010
..................................................GTAAGTGA--------CTATGCCG------GGA..................................................................................................................................19123.0023000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001000000000100100000010000000001000000000000011000100000001000000000000000001000000000100100010000000000010011010000000011010
..................................................GTAAGTGA--------CTATGCCG------GGAT.................................................................................................................................20122.0022000000000000000000000000000000000040000000000000000000000000000000000000000000000000301000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000001000000000000100000000000001000000000000000010000101110001000100000001200
.........................................................................................................................................CTCACGGCAT-TTC--ATTCACTTGCAG................................................25119.0019000000000000000000000000000000000000000000000000000000001000000000000000000011010000000100000010200000000000000000000000000000000000000000000000000000000000000000000200100010010010000000000000000000000000000000000000000000000300100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGA..................................................24117.0017000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000120200000001040000000000000000000000000000000000000001000000000110000001000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGT....................................................................................................................25117.0017000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000002000000000000000100000000000000000000010000000000000000000000000001000011000000001000000001000100230000100000000000
...................................................TAAGTGA--------CTATGCCG------GGATTG--------TG.....................................................................................................................23116.0016000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000100000000000100000000000000000000000000000000000000002000001010110200000000000000000200
........................................................................................................................................ACTCACGGCAT-TTC--ATTCAC......................................................20116.0016000000000000000000000000000000000000000000000000000000000100000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000120000030000001000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000010000000000000000000000000000000000000000000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGT..................................................24114.0014000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000200000000000000000000000000000000010000020000000010000011000000000000000000000000100000000010000110
.........................................................................................................................................CTCACGGCAT-TTC--ATTCACTT....................................................21111.0011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000330100000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000100
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTA...................................................23110.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000010014000000000000000000000000100000000000000000000000010000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAGTA..............................................28110.0010000000000000000000000000000000000000000000000000000000002600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................TCACGGCAT-TTC--ATTCACTT....................................................20110.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000080000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................CTCACGGCAT-TTC--ATTCACTTGC..................................................23110.0010000000000000000000000000000000000000000000000000000000000100000000000000000010100000000000000000000000000000000000000000000000010000000000000000000000000000000000000010000100000000000001000000000000000000000000000000000000000100100000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGGA...................................................................................................................2619.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000010000000000000000000000000000000000100000001000000000000000000000000110101000000010000
........................................................................................................................................ACTCACGGCAT-TTC--ATTC........................................................1819.009000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.....................................................................................................TGAAC------TT-------AGCGTCTCC------ACTCACGGCA...................................................................2618.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000020000000010100001000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000001000
.........................................................................................................................................CTCACGGCAT-TTC--ATTCACTTG...................................................2218.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000102000000000000000000000000000000000000000100200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................TATTGAAC------TT-------AGCGTCTCC------ACTCACG......................................................................2617.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000001000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000001000000000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAT................................................2617.007000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000100000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
..........................................................................................................................................TCACGGCAT-TTC--ATTCACTTG...................................................2117.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000010001000000000000000000000000000000000000000000000000000000000000000100000000000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTT...................................................2317.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000002000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTG....................................................2217.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000002030000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAGTT..............................................2817.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000400000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAAA...............................................2716.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000301000000000000000000000000000000000000000000000000000000
....................................................................................................TTGAAC------TT-------AGCGTCTCC------ACTCACGGCA...................................................................2716.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000100000000
..................................................................................................TATTGAAC------TT-------AGCGTCTCC------ACTCACGG.....................................................................2716.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000020000000010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...................................................TAAGTGA--------CTATGCCG------GGATTG--------TGGT...................................................................................................................2515.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100200000000001000000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTC....................................................2215.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCT.................................................2515.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000001000000000000000000000000000
...................................................TAAGTGA--------CTATGCCG------GGATTG--------TAA....................................................................................................................2415.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000010000000010000000000000000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAGC...............................................2715.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000100
................................................................................................................................................CAT-TTC--ATTCACTTGCAGT...............................................1915.005000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................................GTAAGTGA--------CTATGCCG------GG...................................................................................................................................1815.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001000000000000000000000000000000000000000000000000000000100100000000000000000000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAC................................................2615.005000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000010000000000000000010000000000000000000000000000000000000000000000000000000000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------A......................................................................................................................2315.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001000000000000000000000000000000000000000000000010000100
....................................................AAGTGA--------CTATGCCG------GGATTG--------TGG....................................................................................................................2315.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000110000000000001100
...........................................................................................................................................CACGGCAT-TTC--ATTCACTTGCAG................................................2314.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000001000000000000000000000000000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAGG...............................................2714.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010010000000000000000000000000000000000000000000000
......................................................GTGA--------CTATGCCG------GGATTG--------TG.....................................................................................................................2014.004000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000001000000010000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGA....................................................................................................................2514.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000010000
.....................................................AGTGA--------CTATGCCG------GGATTG--------TGG....................................................................................................................2214.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000
.........................................................................................................................................................................TCACCGCCGAGAAGGAGAAACAG.....................2314.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TTGAAC------TT-------AGCGTCTCC------ACTCACGGC....................................................................2614.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
....................................................AAGTGA--------CTATGCCG------GGATTG--------TG.....................................................................................................................2214.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000100000000
.................................................................................................................T-------AGCGTCTCC------ACTCACGGCAT-TTC--AT..........................................................2614.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................TCACGGCAT-TTC--ATTCACTTGCAGA...............................................2514.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000000000000000000010000000000000000000000000000000000000000000000100
.........................................................................................................................................CTCACGGCAT-TTC--ATTCACT.....................................................2013.003000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000001000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................CAT-TTC--ATTCACTTGCAGTT..............................................2013.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................CTCACGGCAT-TTC--ATTCACTTGCAGA...............................................2613.003000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCG.................................................2513.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000100000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................TATTGAAC------TT-------AGCGTCTCC------ACTCACGGCA...................................................................2913.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................G--------TGGTTATTGAAC------TT-------AGCGTCTCC------A............................................................................2513.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
..........................................................................................................................................TCACGGCAT-TTC--ATTCACTTGCATC...............................................2513.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................AT-TTC--ATTCACTTGCAGT...............................................1813.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000100000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
........................................................GA--------CTATGCCG------GGATTG--------TGGTT..................................................................................................................2113.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000100000000000000000000010000000
...................................................................TATGCCG------GGATTG--------TGGTTATTG..............................................................................................................2213.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101010000000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACG.....................................................2113.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000
..................................................................CTATGCCG------GGATTG--------TGGTTATT...............................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000
...........................................................................................................................................CACGGCAT-TTC--ATTCACTTGCAGT...............................................2412.002000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TAAGTGA--------CTATGCCG------GGATTG--------TGGA...................................................................................................................2512.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100
........................................................GA--------CTATGCCG------GGATTG--------TGG....................................................................................................................1912.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
......................................................GTGA--------CTATGCCG------GGATTG--------TGGT...................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGG..................................................2412.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.GCTGATCATACTGTTGAGCTT...............................................................................................................................................................................................2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CGCTGATCATACTGTTGAGCTTTATTTATCCCTGCACGTACATCACCAAGGTAAGTGA--------CAGTGCCG------GGATTG--------TGGTTATTAAAA------AT-------ACCTTCTCC------ACTCACGGCAT-TTC--ATTCACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTCAAGGAGGTGATGAAGATCSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTG...................................................231184.00184180200020
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCA.................................................251179.00179123113021129
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTT....................................................221159.001594903011060
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAG................................................261149.001491137011243
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACT.....................................................211147.001472511081120
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGC..................................................241111.00111931520010
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAGT...............................................27126.002612015170
..................................................GTAAGTGA--------CAGTGCCG------GGATTG--------TGG....................................................................................................................25122.002210003171
..................................................GTAAGTGA--------CAGTGCCG------GGA..................................................................................................................................19121.002130001440
.........................................................................................................................................CTCACGGCAT-TTC--ATTCACTTGC..................................................23118.001818000000
.........................................................................................................................................CTCACGGCAT-TTC--ATTCACTTGCA.................................................24114.001413000100
..................................................GTAAGTGA--------CAGTGCCG------GGAT.................................................................................................................................20113.00132000830
.........................................................................................................................................CTCACGGCAT-TTC--ATTCACTTG...................................................22112.001212000000
..................................................GTAAGTGA--------CAGTGCCG------GGATT................................................................................................................................2119.0092000430
.........................................................................................................................................CTCACGGCAT-TTC--ATTCACTTGCAG................................................2519.0099000000
...................................................TAAGTGA--------CAGTGCCG------GGATTG--------T......................................................................................................................2216.0060000150
..................................................GTAAGTGA--------CAGTGCCG------GGATTG--------.......................................................................................................................2215.0050000320
..................................................GTAAGTGA--------CAGTGCCG------GGATTG--------TG.....................................................................................................................2415.0051000220
........................................................................................................................................ACTCACGGCAT-TTC--ATTCAC......................................................2014.0042010010
...........................................................................................................................................CACGGCAT-TTC--ATTCACTTGCAGT...............................................2413.0030100110
..................................................GTAAGTGA--------CAGTGCCG------GGATTG--------T......................................................................................................................2313.0030000120
...................................................TAAGTGA--------CAGTGCCG------GGATTG--------TGG....................................................................................................................2413.0030000030
.........................................................................................................................................CTCACGGCAT-TTC--ATTCACT.....................................................2013.0031000020
..................................................GTAAGTGA--------CAGTGCCG------GGATTG--------TGGT...................................................................................................................2613.0031000200
..........................................................................................................................................TCACGGCAT-TTC--ATTCACTTGCA.................................................2312.0022000000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAGA...............................................2712.0020000020
..................................................GTAAGTGA--------CAGTGCCG------GGATTG--------TGGTT..................................................................................................................2712.0020100100
.........................................................................................................................................CTCACGGCAT-TTC--ATTCACTTGCAGT...............................................2612.0020010100
.....................................................................................................................................................................................AGGAGAAACAGCTCAAGGAGGT..........2212.0020000110
........................................................................................................................................ACTCACGGCAT-TTC--ATTCA.......................................................1912.0021010000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAGC...............................................2712.0021100000
.................................................................................................................................C------ACTCACGGCAT-TTC--ATTCACTTGCAG................................................2712.0022000000
...........................................................................................................................................CACGGCAT-TTC--ATTCACTTGCA.................................................2212.0021000010
..................................................GTAAGTGA--------CAGTGCCG------GG...................................................................................................................................1812.0020000110
.........................................................................................................................................CTCACGGCAT-TTC--ATTCACTT....................................................2112.0022000000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAA................................................2612.0022000000
.................................................................................................................................................AT-TTC--ATTCACTTGCAGT...............................................1812.0020000020
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAT................................................2612.0021000010
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAC................................................2612.0020200000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGT..................................................2412.0020000110
.........................................................................................................................................................................................GAAACAGCTCAAGGAGGT..........1812.0020000110
...................................................TAAGTGA--------CAGTGCCG------GGATTG--------TG.....................................................................................................................2311.0010000010
........................................................................................................................................................................................AGAAACAGCTCAAGGAGGT..........1911.0010000100
...................................................................................................................................................................................GAAGGAGAAACAGCTCAAGGAGGTGA........2611.0010000010
..........................................................................................................................................TCACGGCAT-TTC--ATTCACTTGC..................................................2211.0011000000
..................................................................CAGTGCCG------GGATTG--------TGGTTATTAAA............................................................................................................2511.0010000100
........................................................................................................................................................................................AGAAACAGCTCAAGGAGGTGATGAA....2511.0010000100
.........................................................................................................................................................................................GAAACAGCTCAAGGAGGTGATGAA....2411.0010000100
.................................................................................................................................C------ACTCACGGCAT-TTC--ATTCACTT....................................................2311.0011000000
........................................................GA--------CAGTGCCG------GGATTG--------TGGT...................................................................................................................2011.0010001000
.................................................................................................TTATTAAAA------AT-------ACCTTCTCC------.............................................................................2011.0011000000
...................................................................AGTGCCG------GGATTG--------TGGTT..................................................................................................................1811.0010000010
.............................................................................................................................TCTCC------ACTCACGGCAT-TTC--ATTCACTT....................................................2711.0011000000
.................................................................................................................T-------ACCTTCTCC------ACTCACGGCAT-T................................................................2211.0011000000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTC...................................................2311.0011000000
.........................................................................................................................ACCTTCTCC------ACTCACGGC....................................................................1811.0011000000
............................................................................................................................TTCTCC------ACTCACGGCAT-TTC--ATTCACT.....................................................2711.0011000000
....................TTTATTTATCCCTGCACGTACAT..........................................................................................................................................................................2311.0010000010
...........................................................................................................................................CACGGCAT-TTC--ATTCACTTGCAG................................................2311.0010000010
...................................................TAAGTGA--------CAGTGCCG------GGATTG--------.......................................................................................................................2111.0010000100
...................................................................................................................................................................................GAAGGAGAAACAGCTCAAGGA.............2111.0010000010
..........................................................................................................................................................................................AAACAGCTCAAGGAGGTGAT.......2011.0010000100
......................................................GTGA--------CAGTGCCG------GGATTG--------.......................................................................................................................1811.0010000100
....................................................AAGTGA--------CAGTGCCG------GGATTG--------.......................................................................................................................2011.0011000000
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCC.................................................2511.0011000000
....................................................AAGTGA--------CAGTGCCG------GGATTG--------TG.....................................................................................................................2211.0010000100
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTGCAGTT..............................................2811.0011000000
.......................................................TGA--------CAGTGCCG------GGATTG--------T......................................................................................................................1811.0010000010
....................................................................................................................................................................GTACATCACCGCCGAGAAGGAGA..........................2311.0010000100
......................................................GTGA--------CAGTGCCG------GGATTG--------TGGTTAT................................................................................................................2511.0010000010
..........................................................................................................................................TCACGGCAT-TTC--ATTCACT.....................................................1911.0011000000
.........................................................................................................................................CTCACGGCAT-TTC--ATTCACTTGCT.................................................2411.0011000000
.....................................................................................................................................................................................AGGAGAAACAGCTCAAGGAGGTGATGA.....2711.0010000100
........................................................................................................................................ACTCACGGCAT-TTC--ATTCACTTCA..................................................2411.0011000000
......................................................GTGA--------CAGTGCCG------GGATTG--------TG.....................................................................................................................2011.0010000100
..........................................................................................................................................TCACGGCAT-TTC--ATTCACTTG...................................................2111.0011000000
........................................................GA--------CAGTGCCG------GGATTG--------TGGTTATT...............................................................................................................2411.0010000010
..........................................................................................................................................TCACGGCAT-TTC--ATTCACTTGCAG................................................2411.0011000000
.................................................................................................................................................AT-TTC--ATTCACTTGCAGTT..............................................1920.5010000100
droYak3
CGCTGATCATACTGCTGAGCTTTATTTACCCATGCACGTACATCACCAAGGTAAGTGA--------CAATGCCG------GGATTG--------TGGTTATTGAAA------AT-------ACCTTCTCC------ACTCACGGCAT-TAT--ATTCACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTCAAGGAGGTGATGAAGATCSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
........................................................................................................................................ACTCACGGCAT-TAT--ATTCACTTG...................................................231210.0021016147100100000
........................................................................................................................................ACTCACGGCAT-TAT--ATTCACTTGCA.................................................251109.001093276000010000
........................................................................................................................................ACTCACGGCAT-TAT--ATTCACTTGCAG................................................26187.00871261812300000
........................................................................................................................................ACTCACGGCAT-TAT--ATTCACTTGC..................................................24182.00822947600000000
........................................................................................................................................ACTCACGGCAT-TAT--ATTCACTT....................................................22132.00321312003400000
........................................................................................................................................ACTCACGGCAT-TAT--ATTCACT.....................................................21127.0027168000300000
........................................................................................................................................ACTCACGGCAT-TAT--ATTCACTTGCAGT...............................................27123.0023213232100000
..................................................GTAAGTGA--------CAATGCCG------GGATTG--------T......................................................................................................................23111.001122000070000
.........................................................................................................................................CTCACGGCAT-TAT--ATTCACTTGCAG................................................25111.0011010001000000
..................................................GTAAGTGA--------CAATGCCG------GGATTG--------TGG....................................................................................................................25110.001071100010000
.........................................................................................................................................CTCACGGCAT-TAT--ATTCACTTGCA.................................................2417.00707000000000
..................................................GTAAGTGA--------CAATGCCG------GGATTG--------TGGTT..................................................................................................................2717.00740100020000
..................................................GTAAGTGA--------CAATGCCG------GGATTG--------.......................................................................................................................2215.00501110020000
..................................................GTAAGTGA--------CAATGCCG------GGATTG--------TGGT...................................................................................................................2615.00520000030000
.........................................................................................................................................CTCACGGCAT-TAT--ATTCACTTG...................................................2215.00505000000000
.................................................................................................................T-------ACCTTCTCC------ACTCACGGCAT-.................................................................2114.00404000000000
..................................................GTAAGTGA--------CAATGCCG------GG...................................................................................................................................1814.00404000000000
.........................................................................................................................................CTCACGGCAT-TAT--ATTCACTTGC..................................................2314.00404000000000
........................................................GA--------CAATGCCG------GGATTG--------TGGTT..................................................................................................................2114.00402000020000
........................................................................................................................................................................................AGAAACAGCTCAAGGAGGT..........1913.00301100010000
..................................................GTAAGTGA--------CAATGCCG------GGAT.................................................................................................................................2013.00311100000000
..................................................GTAAGTGA--------CAATGCCG------GGATTG--------TGGTTAT................................................................................................................2913.00330000000000
....................................................AAGTGA--------CAATGCCG------GGATTG--------TGG....................................................................................................................2313.00303000000000
..................................................GTAAGTGA--------CAATGCCG------GGATTG--------TG.....................................................................................................................2413.00301000020000
......................................................................................................................................................................................GGAGAAACAGCTCAAGGAGGT..........2112.00200000020000
..................................................................CAATGCCG------GGATTG--------TGGTT..................................................................................................................1912.00200000020000
........................................................................................................................................ACTCACGGCAT-TAT--ATTCACTTGCAGC...............................................2712.00201100000000
..CTGATCATACTGCTGAGCTTTATTTACCC......................................................................................................................................................................................2912.00220000000000
.........................................................................................................................................CTCACGGCAT-TAT--ATTCACTTGCAGT...............................................2612.00201100000000
......................................................GTGA--------CAATGCCG------GGATTG--------T......................................................................................................................1912.00202000000000
................................................................................................................AT-------ACCTTCTCC------ACTCACGGC....................................................................2012.00202000000000
........................................................................................................................................ACTCACGGCAT-TAT--ATTCACTTGCG.................................................2512.00220000000000
...................................................................................................ATTGAAA------AT-------ACCTTCTCC------ACTCACGGC....................................................................2712.00202000000000
....................................................................................................................................................................GTACATCACCGCCGAGAAGGA............................2112.00201000010000
.......................................................................................................................................................................CATCACCGCCGAGAAGGAG...........................1912.00200000020000
........................................................................................................................................ACTCACGGCAT-TAT--ATTCACC.....................................................2112.00220000000000
.................................................................................................................T-------ACCTTCTCC------ACTCACGGCA...................................................................2012.00202000000000
....................................................AAGTGA--------CAATGCCG------GGATTG--------TGGTTATTG..............................................................................................................2912.00200000020000
.....................................................AGTGA--------CAATGCCG------GGATTG--------T......................................................................................................................2012.00200100010000
.................................................................................................................................................AT-TAT--ATTCACTTGCAGTT..............................................1912.00202000000000
.......................................................TGA--------CAATGCCG------GGATTG--------TGGTTATTG..............................................................................................................2612.00202000000000
.................................................................................................................T-------ACCTTCTCC------ACTCACGGC....................................................................1912.00202000000000
..............................................................................................................................................GGCAT-TAT--ATTCACTTGCAG................................................2012.00202000000000
...................................................TAAGTGA--------CAATGCCG------GGATTG--------TGG....................................................................................................................2411.00101000000000
.........................................................................................................................ACCTTCTCC------ACTCACGGCA...................................................................1911.00101000000000
...........................................................................................................................CTTCTCC------ACTCACGGCAT-T................................................................1911.00101000000000
..................................................GTAAGTGA--------CAATGCCG------GGAC.................................................................................................................................2011.00100100000000
.........................................................................................................................ACCTTCTCC------ACTCACGGCAT-T................................................................2111.00101000000000
........................................................................................................................................ACTCACGGCAT-TAT--ATTCACTTGCAGTA..............................................2811.00101000000000
.......................................................................................................AAA------AT-------ACCTTCTCC------ACTCACGGCAT-T................................................................2611.00101000000000
..................................................GTAAGTGA--------CAATGCCG------GGA..................................................................................................................................1911.00100000010000
..........................................................................................................................................TCACGGCAT-TAT--ATTCACTTGC..................................................2211.00101000000000
.......................................................................................................................................................................................GAGAAACAGCTCAAGGAGGTGATGA.....2511.00101000000000
........................................................................................................................................................................ATCACCGCCGAGAAGGAGAAACAGCC...................2611.00100100000000
....................................................AAGTGA--------CAATGCCG------GGATTG--------TG.....................................................................................................................2211.00100000010000
..................................................................................................................................................................................AGAAGGAGAAACAGCTCAAGGA.............2211.00100000010000
......................................................GTGA--------CAATGCCG------GGATTG--------TGG....................................................................................................................2111.00101000000000
..........................................................................................................................................TCACGGCAT-TAT--ATTCACTTGCA.................................................2311.00101000000000
......................................................GTGA--------CAATGCCG------GGATTG--------TGGTTATT...............................................................................................................2611.00101000000000
....................................................AAGTGA--------CAATGCCG------GGATTG--------TGGT...................................................................................................................2411.00100000010000
......................................................GTGA--------CAATGCCG------GGATTG--------TGGTTATTG..............................................................................................................2711.00101000000000
.....................................................AGTGA--------CAATGCCG------GGATTG--------TGGTTA.................................................................................................................2511.00100100000000
.................................................................................................................................................................................GAGAAGGAGAAACAGCTCAAG...............2111.00101000000000
...................................................................................................................................................................................GAAGGAGAAACAGCTCAAGGAGGT..........2411.00100000010000
........................................................................................................................................ACTCACGGCAT-TAT--ATTCACTTGCAGTT..............................................2811.00100000010000
..................................................................CAATGCCG------GGATTG--------TGGTTATTG..............................................................................................................2311.00100000010000
.................................................................................................TTATTGAAA------AT-------ACCTTCTCC------ACTCACGGC....................................................................2911.00101000000000
....................................................................ATGCCG------GGATTG--------TGGTTATTGAA............................................................................................................2311.00101000000000
...................................................................................................ATTGAAA------AT-------ACCTTCTCC------ACTCACGG.....................................................................2611.00101000000000
..............................................................................................................................................GGCAT-TAT--ATTCACTTGCAGT...............................................2111.00101000000000
...................................................................AATGCCG------GGATTG--------TGGTTA.................................................................................................................1911.00100000010000
........................................................GA--------CAATGCCG------GGATTG--------TGG....................................................................................................................1911.00100100000000
....GATCATACTGCTGAGCTTT..............................................................................................................................................................................................1911.00100000010000
.........................................................................................................................................CTCACGGCAT-TAT--ATTCACTTGTT.................................................2411.00101000000000
................................................................................................................................................CAT-TAT--ATTCACTTGCAGTT..............................................2011.00100000010000
.................................................................................................................................C------ACTCACGGCAT-TAT--ATTCACTTGCAG................................................2711.00101000000000
.................................................................................................................................C------ACTCACGGCAT-TAT--ATTCACT.....................................................2211.00100100000000
......................................................................................................GAAA------AT-------ACCTTCTCC------ACTCACGG.....................................................................2311.00101000000000
.................................................................................................................................C------ACTCACGGCAT-TAT--ATTCACTTGCAGT...............................................2811.00101000000000
........................................................GA--------CAATGCCG------GGATTG--------TGGTTAT................................................................................................................2311.00100000010000
..................................................................CAATGCCG------GGATTG--------TGGT...................................................................................................................1811.00101000000000
........................................................................................................................................ACTCACGGCAT-TAT--ATTCACTTGG..................................................2411.00110000000000
CGCTGATCATACTGCTGAGC.................................................................................................................................................................................................2011.00101000000000
.................................................................................................................T-------ACCTTCTCC------ACTCACGGCAT-T................................................................2211.00101000000000
...........................................................................................................................................CACGGCAT-TAT--ATTCACTTGCA.................................................2211.00110000000000
.....................................................................................................................................................................................AGGAGAAACAGCTCAAGGAGGTGATG......2611.00100000010000
........................................................................................................................................ACTCACGGCAT-TAT--ATTCACTTGCAC................................................2611.00101000000000
..................................................GTAAGTGA--------CAATGCCG------GGATT................................................................................................................................2111.00101000000000
....................................................................................................................................................................................AAGGAGAAACAGCTCAAGGAGGT..........2311.00100000010000
..................................................GTAAGTGA--------CAATGCCG------GGATTG--------TGA....................................................................................................................2511.00101000000000
....................................................................ATGCCG------GGATTG--------TGGTTATT...............................................................................................................2011.00100000010000
....................................................AAGTGA--------CAATGCCG------GGATTG--------T......................................................................................................................2111.00100000010000
....................................................AAGTGA--------CAATGCCG------GGATTG--------.......................................................................................................................2011.00100000010000
..........................................................................................................................................TCACGGCAT-TAT--ATTCACTTGCAGT...............................................2511.00100000100000
.........................................................................................................................................................................................GAAACAGCTCAAGGAGGT..........1811.00101000000000
.......CATACTGCTGAGCTTTATTTACCCATG...................................................................................................................................................................................2711.00100000010000
.........................................................................................................A------AT-------ACCTTCTCC------ACTCACGGC....................................................................2111.00101000000000
...................................................TAAGTGA--------CAATGCCG------GGATTG--------TG.....................................................................................................................2311.00101000000000
......................................................................GCCG------GGATTG--------TGGTTATTGAA............................................................................................................2111.00101000000000
........................................................................................................................................ACTCACGGCAT-TAT--ATTCACTTGCT.................................................2511.00110000000000
.GCTGATCATACTGCTGAGCT................................................................................................................................................................................................2011.00100000010000
.........................................................................................................A------AT-------ACCTTCTCC------ACTCACGGCAT-TAT--............................................................2611.00101000000000
....................................................AAGTGA--------CAATGCCG------GGAT.................................................................................................................................1811.00101000000000
.................................................................................................................................................AT-TAT--ATTCACTTGCAGT...............................................1811.00101000000000
.....................................................................................................................................................................................AGGAGAAACAGCTCAAGGAGGT..........2211.00100000010000
...................................................TAAGTGA--------CAATGCCG------GGA..................................................................................................................................1811.00101000000000
............................................................................................................................TTCTCC------ACTCACGGCAT-TAT--ATTCACTTG...................................................2911.00101000000000
...........................................................................................................................................CACGGCAT-TAT--ATTCACTTGCAGT...............................................2411.00100000100000
......................................................GTGA--------CAATGCCG------GGATTG--------TGGT...................................................................................................................2211.00101000000000
..........................................................................................................................................................................CACCGCCGAGAAGGAGAAACAGCC...................2411.00100100000000
.....................................................AGTGA--------CAATGCCG------GGATTG--------.......................................................................................................................1911.00100000010000
...........................................................................................................................................CACGGCAT-TAT--ATTCACTTGC..................................................2111.00110000000000
.................................................................................GATTG--------TGGTTATTGAAA------AT-------ACC.........................................................................................2211.00100100000000
.........................................................................................................................................................................................GAAACAGCTCAAGGAGGTGAT.......2111.00100000010000
.....................................................AGTGA--------CAATGCCG------GGATTG--------TGG....................................................................................................................2211.00101000000000
......................................................GTGA--------CAATGCCG------GGATTG--------TG.....................................................................................................................2011.00101000000000
.................................................................................................................................................................................GAGAAGGAGAAACAGCTCAAGGAGGTGA........2811.00100000010000
................................................................................................................AT-------ACCTTCTCC------ACTCACGGCAT-T................................................................2311.00101000000000
..................................................GTAAGTGA--------CAATGCCG------GGATTG--------G......................................................................................................................2311.00110000000000
.................................................................................................................................................AT-TAT--ATTCACTTGCAGTTT.............................................2080.13101000000000
droEug1
CGCTGATCATACTGTTGAGCTTCATCTATCCATGCACGTATATCACCAAGGTAAGTGG--------CTATGCCG------GGATCG--------TGGTTGATCTAT------GT-------ACCTTCTCC------ACTCACGGCAT-TTC--ATTCACTTGTAGTACATCACCGCTGAAAAGGAGAAGCAGCTCAAGGAGGTAATGAAGATCSizeHit CountTotal NormTotal
No Reads
droBia1
CGCTGATCATACTGCTCAGCTTCATCTACCCCTGCACGTACATCACCAAAGTAAGTGG--------CCATGCCG------GGATTG--------TGGTTTAA---C-------CAGA-GGTTCCTCCTCC------ACTCACGGCAT-TTC--ATTCACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTCAAGGAGGTGATGAAGATCSizeHit CountTotal NormTotal
No Reads
droTak1
CGCTGATCATACTGCTGAGCTTCATCTATCCCTGCACGTACATCACCAAGGTAAGTGG--------CTATGCCG------GGATTG--------TGGTTTACAATA---------GAAAG-ATCCCCTCC------ACTCACGGCAT-TTC--ATTCACTTGCAGTACATCACCGCCGAGAAGGAGAAGCAGCTGAAGGAGGTGATGAAGATCSizeHit CountTotal NormTotal
No Reads
droEle1
CGCTAATCATACTGCTGAGCTTCATCTATCCGTGCACGTACATCACCAAGGTAAGTGG--------GTATGCCG------GGACTG--------TGGTTCTAAATG------CC-------ATCACCACC------ACTCACGGCAT-TTC--ATTCACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTCAAGGAGGTGATGAAGATCSizeHit CountTotal NormTotal
No Reads
droRho1
CGCTGATCATACTGCTGAGCTTCATCTATCCCTGCACGTACATCACCAAGGTAAGTGG--------GTATGCCG------GGATTG--------TGGTTAAT----------AC-------ACCTCCTCC------ACTCACGGCAT-TTC--ATTCACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTGAAGGAGGTGATGAAGATCSizeHit CountTotal NormTotal
No Reads
droFic1
CGTTGATTATACTGCTCAGCTTCATTTATCCCTGCACGTACATCACCAAGGTAAGTTT--------ATATTTATTT-GTGTTGGT---------------------------GT-------ACCTCCTCC------ACTCACAACAT-TTC--ATTCACCTGCAGTTCATTACCGCCGAGAAGGAGAAGCAGCTCAAGGAGGTGATGAAGATCSizeHit CountTotal NormTotal
No Reads
droKik1
CACTGATCATCTTGCTGAGCTTCATCTATCCGTGCACGTACATCACCAAGGTAAGTCT-------------CCGAGAACGGGAACGAATCGCACAGATCCATATCT------GT-------AT------------------C--TGT-ATC--CTTCTTGTGTAGTACATCACCGCCGAGAAGGAGAAGCAGCTCAAGGAGGTGATGAAGATCSizeHit CountTotal NormTotal
No Reads
droAna3
CGTTCATTATTATGCTGAGCTTTATATATCCTAGCACCGTGGTCGCCAGAG-------------------------------------------------------------------------------------------------------------------CCGTAACCAACGAAAAGGAGCTGCAGTTGAAGGAGATCATGAAGCTASizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
No Reads
droBip1
CGCTGATCATACTGCTCAGTTTCATATATCCCTGCACGTATATAACAAAGGTGAGAGGGACGAGGTCTATA----------------------------GCTTTCGGGTTGTGT-------A------AT------ACTTTAAATATTTTA--TTCCAATTTCAGTATATAACCGCCGAAAAGGAAAAACAACTGAAGGAAGTCATGAAGATCSizeHit CountTotal NormTotal
No Reads
dp5
CGCTGATTATCCTCCTCAGCTTCATCTATCCGTGCACGTACATCACAAAGGTAAGTGG--------CTATGCCGCG-ACGGGATTG--------A---------AC------CT-CT-CAT-CTCTCACC------TCTCACGGCAT-ATC--AATCACTTGCAGTACATCACCGCCGAGAAGGAGAAGCAGCTCAAGGAGGTAATGAAGATCSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTGCA.................................................2511041.0010411817788628194035
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTGCAG................................................2611039.0010391833886619129092
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTGC..................................................241892.00892138566414472238
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTG...................................................231845.0084516401912314142527
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTT....................................................221234.00234115353112042512
........................................................................................................................................TCTCACGGCAT-ATC--AATCACT.....................................................21191.00911535121125110
.........................................................................................................................................CTCACGGCAT-ATC--AATCACTTGCAG................................................25176.007607402000000
.........................................................................................................................................CTCACGGCAT-ATC--AATCACTTGCA.................................................24175.007507311000000
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTGCAGT...............................................27166.006604660149000
..................................................GTAAGTGG--------CTATGCCGCG-ACGGG...................................................................................................................................23148.004803772110000
..................................................GTAAGTGG--------CTATGCCGCG-ACGGGT..................................................................................................................................24146.004603911203000
.........................................................................................................................................CTCACGGCAT-ATC--AATCACTTG...................................................22143.004304300000000
.........................................................................................................................................CTCACGGCAT-ATC--AATCACTTGC..................................................23133.003302705000001
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTGCAC................................................26114.00140535010000
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTGCAA................................................26114.001401200110000
..........................................................................................................................................TCACGGCAT-ATC--AATCACTTGCAG................................................24113.001301110000010
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTGCAGTT..............................................28111.001101000001000
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTGT..................................................24111.00110901010000
.........................................................................................................................................CTCACGGCAT-ATC--AATCACTT....................................................21111.001101100000000
....................................................AAGTGG--------CTATGCCGCG-ACGGGT..................................................................................................................................2219.0090800100000
..................................................................................ATTG--------A---------AC------CT-CT-CAT-CTCTCACC------.............................................................................2219.0090701000010
...................................................TAAGTGG--------CTATGCCGCG-ACGGGT..................................................................................................................................2316.0060600000000
.................................................................................................................................C------TCTCACGGCAT-ATC--AATCACTTGC..................................................2516.0060204000000
........................................................................................................................................TCTCACGGCAT-ATC--AATCACC.....................................................2116.0060006000000
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTGA..................................................2415.0050301010000
..................................................GTAAGTGG--------CTATGCCGCG-ACGGGATT................................................................................................................................2615.0050410000000
.........................................................................................................................................CTCACGGCAT-ATC--AATCACTTGCAGT...............................................2615.0050500000000
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTGCAGC...............................................2714.0040031000000
.................................................................................................................................C------TCTCACGGCAT-ATC--AATCACTTGCAG................................................2714.0040400000000
..................................................GTAAGTGG--------CTATGCCGCG-ACGGGATTG--------.......................................................................................................................2714.0040210001000
..........................................................................................................................................TCACGGCAT-ATC--AATCACTTGCA.................................................2314.0040101200000
..................................................GTAAGTGG--------CTATGCCGCG-ACG.....................................................................................................................................2114.0040400000000
..........................................................................................................................................TCACGGCAT-ATC--AATCACTTG...................................................2114.0040300000010
............................................................................................................................................ACGGCAT-ATC--AATCACTTGCA.................................................2113.0030300000000
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTGCAGA...............................................2713.0030300000000
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTGCG.................................................2513.0030102000000
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTGCAGTTT.............................................2913.0030210000000
.........................................................................................................................................CTCACGGCAT-ATC--AATCACT.....................................................2013.0030300000000
..................................................GTAAGTGG--------CTATGCCGCG-ACGGGA..................................................................................................................................2413.0030300000000
........................................................................................................................................TCTCACGGCAT-ATC--AATC........................................................1813.0030300000000
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTT...................................................2313.0030201000000
..................................................GTAAGTGG--------CTATGCCGCG-ACGGGG..................................................................................................................................2413.0030000300000
........................................................................................................................................TCTCACGGCAT-ATC--AATCAC......................................................2013.0030201000000
............................................................................................................................................ACGGCAT-ATC--AATCACTTG...................................................1912.0020200000000
..................................................GTAAGTGG--------CTATGCCGCG-AC......................................................................................................................................2012.0020200000000
...........................................................................................................................................CACGGCAT-ATC--AATCACTTGCAG................................................2312.0020200000000
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTGCAAA...............................................2712.0020000000020
..........................................................................................................................................TCACGGCAT-ATC--AATCACTTGC..................................................2212.0020200000000
......................................................GTGG--------CTATGCCGCG-ACGGGATT................................................................................................................................2212.0020200000000
.................................................................................................................................C------TCTCACGGCAT-ATC--AATCACTT....................................................2312.0020200000000
..................................................GTAAGTGG--------CTATGCCGCG-ACGG....................................................................................................................................2212.0020200000000
..................................................GTAAGTGG--------CTATGCCGCG-ACGGGC..................................................................................................................................2412.0020011000000
.........................................................................................................................................CTCACGGCAT-ATC--AATCACTTGA..................................................2312.0020200000000
..................GCTTCATCTATCCGTGCACGT..............................................................................................................................................................................2112.0020200000000
.........................................................................................................................................CTCACGGCAT-ATC--AATCACTTGCAGTTT.............................................2812.0020200000000
......................................................................................................................................................................ACATCACCGCCGAGAAGGAGA..........................2112.0020200000000
.........................................................................................................................................CTCACGGCAT-ATC--AATCACTTGCAGTT..............................................2712.0020200000000
...................................................................................................................................................................................GAAGGAGAAGCAGCTCAAGGA.............2112.0020100001000
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTGCAT................................................2612.0020200000000
.......................................................................................................................................................................CATCACCGCCGAGAAGGAGAAGC.......................2312.0020200000000
...............................................................................................................................................GCAT-ATC--AATCACTTGCAG................................................1911.0010100000000
...........................................................................................................................................CACGGCAT-ATC--AATCACTTGC..................................................2111.0010100000000
..........................................................................................................................................TCACGGCAT-ATC--AATCACTTGCAGT...............................................2511.0010001000000
..................................................GTAAGTGG--------CTATGCCGCG-A.......................................................................................................................................1911.0010100000000
..................................................................................ATTG--------A---------AC------CT-CT-CAT-CTCTCA.....................................................................................2011.0010100000000
..................................................GTAAGTGG--------CTATGCCGCG-ACTT....................................................................................................................................2211.0010100000000
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTGCC.................................................2511.0010000010000
................................TGCACGTACATCACAAAGT..................................................................................................................................................................1911.0010100000000
....................................................................ATGCCGCG-ACGGGATTG--------A---------AC------CT-..................................................................................................2211.0010100000000
..............................................................................................A---------AC------CT-CT-CAT-CTCTCACC------TCT..........................................................................2111.0010100000000
....................................................................................................................................................................GTACATCACCGCCGAGAAGGA............................2111.0010100000000
......................................................................................................................................................................ACATCACCGCCGAGAAGGAGAAGC.......................2411.0010100000000
...................................................TAAGTGG--------CTATGCCGCG-ACGG....................................................................................................................................2111.0010100000000
......................................................................................................................................................................................GGAGAAGCAGCTCAAGGAGGT..........2111.0010100000000
........................TCTATCCGTGCACGTACATCACA......................................................................................................................................................................2311.0010100000000
...........................................................................................................................................CACGGCAT-ATC--AATCACTTGCA.................................................2211.0010100000000
.........................CTATCCGTGCACGTACATCACA......................................................................................................................................................................2211.0010100000000
......................................................................................................................................................................................GGAGAAGCAGCTCAAGGA.............1821.0020200000000
..........................................................................................................................................................................CACCGCCGAGAAGGAGAAGCAGCTC..................2511.0010001000000
......................................................................................................................CAT-CTCTCACC------TCTCACGGCAT-AT...............................................................2411.0010100000000
.................................................................................................................................C------TCTCACGGCAT-ATC--AATCACT.....................................................2211.0010001000000
...................................................TAAGTGG--------CTATGCCGCG-ACGGGA..................................................................................................................................2311.0010100000000
.......................ATCTATCCGTGCACGTACATCACAAAGT..................................................................................................................................................................2811.0010100000000
...............................................................................................................................................................................................GCTCAAGGAGGTAATGAAGAT.2111.0010100000000
.........................................................................................................................................................................................GAAGCAGCTCAAGGAGGTAAT.......2111.0010100000000
........................................................................................................................................................................ATCACCGCCGAGAAGGAGAAGCAGCTC..................2711.0010000010000
...............................................AAGGTAAGTGG--------CTATGCCGCG-ACGGG...................................................................................................................................2611.0010100000000
..................................................GTAAGTGG--------CTATGCCGCG-ACGGT...................................................................................................................................2311.0010100000000
....................................................AAGTGG--------CTATGCCGCG-ACGGGA..................................................................................................................................2211.0010000100000
...................................................................................................................................................................................GAAGGAGAAGCAGCTCAAGGAGG...........2311.0010100000000
...................................................................................................................................................................................GAAGGAGAAGCAGCTCAAGGAG............2211.0010100000000
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTGG..................................................2411.0010100000000
...................................................................................................................................................................AGTACATCACCGCCGAGAAGGAGAAGC.......................2711.0010100000000
...............................................................................................................................................................................CCGAGAAGGAGAAGCAGCTC..................2011.0010100000000
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTCA..................................................2411.0010001000000
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTGCT.................................................2511.0010001000000
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTA....................................................2211.0010100000000
...........................................................................................................................................CACGGCAT-ATC--AATCACTTG...................................................2011.0010100000000
........ATCCTCCTCAGCTTCATCT..........................................................................................................................................................................................1911.0010100000000
......................................................................................................................................................................ACATCACCGCCGAGAAGGA............................1911.0010100000000
......................................................................................................................................................................ACATCACCGCCGAGAAGGAGAAG........................2311.0010100000000
......................................................GTGG--------CTATGCCGCG-ACGGGT..................................................................................................................................2011.0010100000000
.....................................................AGTGG--------CTATGCCGCG-ACGGGAT.................................................................................................................................2211.0010100000000
..............................................................................................................................................................................................AGCTCAAGGAGGTAATGAAG...2011.0010100000000
............................................................................................................................................ACGGCAT-ATC--AATCACTTGCAG................................................2211.0010000100000
.................................................................................................................................C------TCTCACGGCAT-ATC--AATCACTTGCAGTT..............................................2911.0010100000000
........................................................................................................................................TCTCACGGCAT-ATC--AATCACA.....................................................2111.0010100000000
.............................................................................................................................TCACC------TCTCACGGCAT-ATC--............................................................1911.0010100000000
......................................................................................................................................................................ACATCACCGCCGAGAAGGAGAA.........................2211.0010100000000
........................................................................................................................................................................ATCACCGCCGAGAAGGAGAAGC.......................2211.0010100000000
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTA...................................................2311.0010000000010
.............................................................................................................................................CGGCAT-ATC--AATCACTTGC..................................................1911.0011000000000
...................................................................TATGCCGCG-ACGGGATTG--------A---------AC------C....................................................................................................2211.0010100000000
.................................................................................................................................C------TCTCACGGCAT-ATC--AATCACTTGCC.................................................2611.0010001000000
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTC....................................................2211.0010001000000
....................................................................................................................................................................................AAGGAGAAGCAGCTCAAGGAG............2111.0010100000000
.....................................................AGTGG--------CTATGCCGCG-ACGGGT..................................................................................................................................2111.0010100000000
........................................................GG--------CTATGCCGCG-ACGGGATTG--------.......................................................................................................................2111.0010100000000
...................................................TAAGTGG--------CTATGCCGCG-ACGGGATT................................................................................................................................2511.0010100000000
..............................CGTGCACGTACATCACAAAGT..................................................................................................................................................................2111.0010100000000
..........................................................................................................................................TCACGGCAT-ATC--AATCACTTGCAT................................................2411.0010100000000
.................................................................................................................................C------TCTCACGGCAT-ATC--AATCACTTGCA.................................................2611.0010100000000
droPer2
CGCTGATTATCCTCCTCAGCTTCATCTATCCGTGCACGTACATCACAAAGGTAAGTGG--------CTATGCCGCG-ACGGGATTG--------A---------AC------CT-CT-CAT-CTCTCACC------TCTCACGGCAT-ATC--AATCACTTGCAGTACATCACCGCCGAGAAGGAGAAGCAGCTTAAGGAGGTAATGAAGATCSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTGCAG................................................261216.00216111521016270
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTGCA.................................................251173.0017310136410130
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTG...................................................231106.001060960190
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTGC..................................................24162.00620580130
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTT....................................................22159.0059720212171
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTGCAGT...............................................27119.0019070471
........................................................................................................................................TCTCACGGCAT-ATC--AATCACT.....................................................21119.0019170560
.........................................................................................................................................CTCACGGCAT-ATC--AATCACTTGCAG................................................25112.00120120000
..................................................GTAAGTGG--------CTATGCCGCG-ACGGGT..................................................................................................................................24110.0010030223
..................................................GTAAGTGG--------CTATGCCGCG-ACGGG...................................................................................................................................2319.009070020
.........................................................................................................................................CTCACGGCAT-ATC--AATCACTTGCA.................................................2418.008080000
........................................................................................................................................TCTCACGGCAT-ATC--AATC........................................................1818.008710000
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTGCAGA...............................................2715.005210020
...................................................TAAGTGG--------CTATGCCGCG-ACGGGT..................................................................................................................................2315.005000122
...................................................TAAGTGG--------CTATGCCGCG-ACGGG...................................................................................................................................2214.004040000
...................................................................................................................................................................................GAAGGAGAAGCAGCTTAAGGA.............2114.004000004
.........................................................................................................................................CTCACGGCAT-ATC--AATCACTTGC..................................................2314.004040000
.........................................................................................................................................CTCACGGCAT-ATC--AATCACTTG...................................................2214.004040000
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTGCAC................................................2613.003020010
.........................................................................................................................................CTCACGGCAT-ATC--AATCACTT....................................................2113.003010020
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTGCAA................................................2612.002020000
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTGG..................................................2412.002020000
...................................................TAAGTGG--------CTATGCCGCG-ACGGGA..................................................................................................................................2312.002001010
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTGT..................................................2412.002020000
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTGCAT................................................2612.002010010
..................................................GTAAGTGG--------CTATGCCGCG-ACGGGG..................................................................................................................................2412.002000110
...................................................TAAGTGG--------CTATGCCGCG-ACGG....................................................................................................................................2112.002020000
........................................................................................................................................TCTCACGGCAT-ATC--AATCAC......................................................2012.002020000
.....................................................................................................................................................................................AGGAGAAGCAGCTTAAGGAGGTAAT.......2511.001010000
.......................................................................................................................AT-CTCTCACC------TCTCACGGCAT-ATC--............................................................2411.001010000
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTGA..................................................2411.001000100
...........................................................................................................................................................................................AGCAGCTTAAGGAGGTAATG......2011.001100000
..........................................................................................................................................TCACGGCAT-ATC--AATCACTTGCA.................................................2311.001010000
...............................................................................................................................................................................................GCTTAAGGAGGTAATGAAG...1911.001001000
..........................................................................................................................................TCACGGCAT-ATC--AATCACTTGCAG................................................2411.001000010
.....................................................AGTGG--------CTATGCCGCG-ACGGGT..................................................................................................................................2111.001010000
............................................................................................................................................ACGGCAT-ATC--AATCACTTGCA.................................................2111.001010000
.........................................................................................................................................CTCACGGCAT-ATC--AATCACTTGCAGT...............................................2611.001010000
.............................................................................................................................................................................................CAGCTTAAGGAGGTAATGA.....1911.001010000
...................................................................................................................................................................................GAAGGAGAAGCAGCTTAAGGAG............2211.001010000
..................................................GTAAGTGG--------CTATGCCGCG-ACGGGA..................................................................................................................................2411.001010000
.........................................................................................................................................CTCACGGCAT-ATC--AATCACTTGCAGTT..............................................2711.001010000
......................................................................................................................................................................ACATCACCGCCGAGAAGGAGAA.........................2211.001000001
..................................................................................ATTG--------A---------AC------CT-CT-CAT-CTCTCAC....................................................................................2111.001010000
.........................................................................................................................................CTCACGGCAT-ATC--AATCACT.....................................................2011.001010000
..........................................................................................................................................TCACGGCAT-ATC--AATCACTT....................................................2011.001000010
..........................................................................................................................................................................CACCGCCGAGAAGGAGAAGC.......................2011.001010000
........................................................................................................................................TCTCACGGCAT-ATC--AATCACTTGCT.................................................2511.001001000
.......................................................................................................................................................................................GAGAAGCAGCTTAAGGAGGTAATGAA....2611.001000001
..........................................................................................................................................TCACGGCAT-ATC--AATCACTTGCAA................................................2411.001010000
.........................................................................................................................................................................................GAAGCAGCTTAAGGAGGT..........1811.001000001
......................................................GTGG--------CTATGCCGCG-ACGGG...................................................................................................................................1911.001010000
.......................................................................................................................................................................CATCACCGCCGAGAAGGA............................1811.001010000
......................CATCTATCCGTGCACGTAC............................................................................................................................................................................1911.001010000
droWil2
--------------------------------------------------------------------------------------------------------------------------------------------------T-TTG--TTTTTCTTACAGTACATTACATCGGAGAAGGAGAAACAACTGAAGGAGGTGATGAAAATASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.........................................................................................................................................................................TTACATCGGAGAAGGAGA..........................1811.00100010
.......................................................................................................................................................................CATTACATCGGAGAAGGA............................1811.00100010
..........................................................................................................................................................................TACATCGGAGAAGGAGAA.........................1811.00101000
....................................................................................................................................................................GTACATTACATCGGAGAAGGA............................2111.00100100
......................................................................................................................................................................ACATTACATCGGAGAAGGAGAAAC.......................2411.00100010
.............................................................................................................................................................................................CAACTGAAGGAGGTGATGA.....1911.00100010
..........................................................................................................................................................................................AAACAACTGAAGGAGGTGAT.......2011.00100010
.....................................................................................................................................................................................AGGAGAAACAACTGAAGGAGGT..........2211.00100010
..........................................................................................................................................................................TACATCGGAGAAGGAGAAA........................1911.00100010
....................................................................................................................................................................GTACATTACATCGGAGAAGGAGAA.........................2411.00100100
.........................................................................................................................................................................................GAAACAACTGAAGGAGGTGA........2011.00100010
droVir3
C------------------------------------------------------------------------------------------------------------------------------TCT------TCTCACGACAT-CCCTTAATCCCTTGCAGTACGTTGCCAACGAAAAGGAATTGCAACTGAAGGAGGTCATGAAAATASizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
..........................................................................................................................................TCACGACAT-CCCTTAATCCCTTGCAG................................................2611.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
........................................................................................................................................................................................AATTGCAACTGAAGGAGGTC.........2011.0010000000000000000000000000000000000000000000000000000000000000000000001000000000
........................................................................................................................................................................GTTGCCAACGAAAAGGAATTGCAA.....................2411.0010000000100000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................ATTGCAACTGAAGGAGGTC.........1911.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................AAAGGAATTGCAACTGAAGGAG............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................GAAAAGGAATTGCAACTGAAGGA.............2311.0010000000000000000000000000000000000000000000000000000000000000100000000000000000
........................................................................................................................................................................................AATTGCAACTGAAGGAGGT..........1911.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................GTACGTTGCCAACGAAAAGGAATTGC.......................2611.0010000000000000001000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................GTTGCCAACGAAAAGGAA...........................1811.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
droMoj3
-------------------------------------------------------------------------------------------------------------------------------------------------AT-TTC--GTCGCCTTACAGTACATCTCCAAGGAGAAGGAAATGCAGTTGAAGGAAGTGATGAAGATASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
...................................................................................................................................................................................GAAGGAAATGCAGTTGAAGGAAGTG.........2511.001000001
...................................................................................................................................................................................GAAGGAAATGCAGTTGAAGG..............2011.001100000
............................................................................................................................................................................................GCAGTTGAAGGAAGTGATGA.....2011.001000001
droGri2
CATTGATAATACTGCTGAGCTTCATCTATCCCTGTACCTACATTACTAAGGTATGTT--------------CGA------TGATTT--------TGGTTTTTTTTGGCT---TT-------ACTTTCACCGTTTACAC---GACAAT-TTC--ATCCTTTTGCAGTACGTGACCAGTGAGAAGGAGAAGCAGCTGAAGGAGGTGATGAAAATASizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
....................TTCATCTATCCCTGTACCTA.............................................................................................................................................................................2011.00110

Generated: 10/20/2015 at 07:14 PM