ID:

dsi_21977

Coordinate:

x:290479-290587 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CCAACAAACCCGAGCTAGAAGTGCTGGACAACGAGCTCATGGAGGACGATGTAAGTAGCTCTGATTTAAAGTGTTTTTTGGTGACAAATTTCAAAAACAAAGAAATAGACCTTGCATTAGAACGATCTTCATTTTATCTAGACACTCATCCAATTTCAGACCACCGCCACAGAGTGGCAGCAGTTTCTCGACCAATGCTTCGAGTCCCT
**************************************************...(((...((((...(((((((..((((((((.((((((((.........))))).....))))))))))).......)))))))..)))).))).............**************************************************
Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
GSM343915
embryo
SRR902008
ovaries
SRR902009
testis
SRR553487
NRT_0-2 hours eggs
SRR553488
RT_0-2 hours eggs
SRR618934
dsim w501 ovaries
M024
male body
SRR553486
Makindu_3 day-old ovaries
.....................TGCTGGACAACGAGCTCATGGAGGACGA................................................................................................................................................................ 28 0 1 2.00 2 0 0 1 1 0 0 0 0 0
..........CGAGCTAGAAGTGCTGGACAACGAGC............................................................................................................................................................................. 26 0 1 2.00 2 1 0 0 0 0 0 0 0 1
...............................CGAGCTCAGGGAGGAC.................................................................................................................................................................. 16 1 5 1.80 9 0 0 0 0 4 5 0 0 0
.......ACCCGAGCTAGAAGTGCTGGACAACGAGC............................................................................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......................GCTGGACAACGAGCTCATGGAG..................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0
........................TGGACAACGAGCTCATGGAGGACGATAA............................................................................................................................................................. 28 2 1 1.00 1 0 0 0 1 0 0 0 0 0
........................TGGACAACGAGCTCATGGAGGACGATAC............................................................................................................................................................. 28 2 1 1.00 1 1 0 0 0 0 0 0 0 0
...............TAGAAGTGCTGGACAACGAG.............................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................AGCAGTTTCTCGACCAATGCTTCGAG..... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.................GAAGTGCTGGACAACGAGCTCATG........................................................................................................................................................................ 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0
........................TGGACAACGAGCTCATGGAGGACGA................................................................................................................................................................ 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.......................CTGGACAACGAGCTCATGGAGGAC.................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 0 0 0 1 0
........................TGGACAACGAGCTCATGGAG..................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..............................GCGAGCTCAGGGAGGAC.................................................................................................................................................................. 17 2 13 0.31 4 0 0 0 0 3 1 0 0 0
................................GAGCTCAGGGAGGAC.................................................................................................................................................................. 15 1 16 0.06 1 0 0 0 0 1 0 0 0 0
........................................GAAGGACGATGTAACT......................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

GGTTGTTTGGGCTCGATCTTCACGACCTGTTGCTCGAGTACCTCCTGCTACATTCATCGAGACTAAATTTCACAAAAAACCACTGTTTAAAGTTTTTGTTTCTTTATCTGGAACGTAATCTTGCTAGAAGTAAAATAGATCTGTGAGTAGGTTAAAGTCTGGTGGCGGTGTCTCACCGTCGTCAAAGAGCTGGTTACGAAGCTCAGGGA
**************************************************...(((...((((...(((((((..((((((((.((((((((.........))))).....))))))))))).......)))))))..)))).))).............**************************************************
Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
SRR902009
testis
SRR618934
dsim w501 ovaries
M025
embryo
SRR553485
Chicharo_3 day-old ovaries
SRR553486
Makindu_3 day-old ovaries
.......................................ACCACCTGCTACATTC.......................................................................................................................................................... 16 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................................................................AGCTGGTTACGTCGCGCAGGG. 21 3 2 0.50 1 0 1 0 0 0 0
...............................................................................................................................................TGAGTAGGTTAATGTC.................................................. 16 1 2 0.50 1 0 0 1 0 0 0
...........................................................................................................................................................................................AGCTGGTTACGTCGCGCAGGGA 22 3 2 0.50 1 0 1 0 0 0 0
....................................................................................GTTTAAAGGTTTTGTTTTGTTAT...................................................................................................... 23 3 7 0.14 1 1 0 0 0 0 0
..............................................................................................................GAACGTAGTTTTGCTAGCAG............................................................................... 20 3 8 0.13 1 0 0 0 1 0 0
...........................................................................................................................CTAGAAGTACAATAGATC.................................................................... 18 1 10 0.10 1 0 0 1 0 0 0
..................................................................................................................................................................TGGCGGTGGCTCACC................................ 15 1 20 0.05 1 0 0 0 0 1 0
.....................................................................................................................................................................................TCAAGGAGCTGGATACG........... 17 2 20 0.05 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:290429-290637 - dsi_21977 CCAACAAACCCGAGCTAGAAGTGCTGGACAACGAGCTCATGGAGGACGATGTAAGTAGCTCTGA------------------------------------------------------------------------------------------------------------------------------------------------TTTAAAGTGTTT------------------TTTGGTGACAAATT--TCAAA----------------------------------------------------AACAAAGAAATAGACCTTGCATTAG------A------------ACGATCTTCA------------------------------------------------------------TT-------TTATCTAGACACTCATCC------------------------AATT-----------TCAGACCACCGCCACAGAGTGGCAGCAGTTTCTCGACCAATGCTTCGAGTCCCT
droSec2 scaffold_10:225840-226048 - CCAACAAACCCGAGCTAGAAGTGCTGGACAACGAGCTCATGGAGGACGATGTAAGTAGCTCTTA------------------------------------------------------------------------------------------------------------------------------------------------TTTAAAGTGTTT------------------TTTGGTGACAAATT--TCGAA----------------------------------------------------AACAAAGAAATAGACCTTGCATTAG------A------------ACGATCTTCA------------------------------------------------------------TT-------TTATCTAGACACTCATCC------------------------AATT-----------TCAGACCACCGCCACAGAGTGGCAGCAGTTTCTAGACCAATGCTTCGAGTCCCT
dm3 chrX:368184-368392 - CCAACAAACCCGAGCTAGAAGTGCTGGACAACGAGCTCATGGAGGACGATGTAAGTAGCTCTGA------------------------------------------------------------------------------------------------------------------------------------------------TTTAAAGTGTTT------------------TTAGGTGACAAATT--TCAAA----------------------------------------------------AACCAAGAAATAGACCTTGCATTAG------A------------ACGATCTTCA------------------------------------------------------------TT-------TTATCTAGACATTCATCC------------------------AATT-----------TCAGACCTCCGCCACTGAGTGGCAGCAGTTTCTAGACCAATGCTTCGAGTCCCT
droEre2 scaffold_4644:315741-315932 - CCAACAAACCCGAGCTAGAAGTGCTGGAAAACGAGCTCATGGAGAACGATGTATGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTTTCCTTTTTAGTATTTTATGTTAGATGACAAATT--TCAAA----------------------------------------------------AACGAAAAAATGTATTTTGCATTGG------C------------TCAATCGTCA-----------------------------------------------------------------------------------------------------------------TT-----------TCAGACCTTCGCCACCGAGTGGCAGCAGTTCCTGGATCAATGCTTCGAGTCCCT
droYak3 X:297075-297257 - CCAACAAGCCCGAGCTAGAAGTGCTGGACAACGAGCTCATGGAGGACGATGTGAGTAGAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAGATCTTGC--CAATGCAATC------------TCAATCGTCA------------------------------------------------------------CCTTGCA-------CAGACACTCATCCAACTGCACT------------ACCGATT-----------TCAGACCTCCGCCACAGAGTGGCAGCAGTTCCTGGACCAATGCTTCGAGTCCCT
droEug1 scf7180000409277:741524-741606 - CCAATAAACCCGAACTGGAGGTGCTGGACAACGAGCTTATGGAGGACGATGTGAGTGGTTTCGA----------------------------------------------------------------------------------------------------------------------------------------------GTTTTTAGGCCTTG------------------TTTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000301760:1400295-1400379 - CCAACAAACCCGAACTGGAGGTGCTGGACAACGAGCTCATGGAGGACGATGTGAGTGGCTCGGT----------------------------------------------------------------------------------------------------------------------------------------------GTTTCGACGCCTTG------------------TTTGGCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415179:399798-399880 - CCAATAAACCCGAACTGGAGGTGCTGGACAACGAGCTCATGGAGGACGACGTGAGTGGTTTTGT----------------------------------------------------------------------------------------------------------------------------------------------AATTTGAGGCCTTG------------------TTTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491272:656303-656369 - CCAACAAACCCGAACTGGAGGTGCTGGATAACGAGCTCATGGAGGACGATGTGAGTGGCTCTAA----------------------------------------------------------------------------------------------------------------------------------------------G--TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000776532:182868-182950 - CCAACCGACCCGAACTGGAGGTGCTGGACAACGAGCTTATGGAGGACGATGTAAGTGGCTCTGA----------------------------------------------------------------------------------------------------------------------------------------------GTTTTGCGGCCTTG------------------TTTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453927:842853-843165 - CCAACAAACCCGAACTGGAGGTGCTGGACAACGAGCTCATGGAGGACGATGTAAGTTGCTTCGA----------------------------------------------------------------------------------------------------------------------------------------------G-TTTGAGGCCTTG------------------TTTGGCA------CATTCGGAGGTCTTTGCGCGTGCGAATAAAGAGAAAGTTGTACCCCAAAGGTGGTTATGC--------AA-AAA---------------ACCAGCTACTGCAATTCAATCAGCAAGAAACTTTTATATTTACTTATAGTTATTTAAATTTAATAAGTTAAAATACACACATGTATCTTAAA-------CAGAA-----------TGTATT------------ACCAATT-----------TCAGGCCTCCGCCACCGAATGGCAGCAGTTCCTGGACCAATGCTTCGAGACCCT
droKik1 scf7180000302685:338907-339079 - CCAACAAGCCCGAGCTGGAAGTTCTAGACAATGAGCTGATGGAGGATGATGTGAGTGGCAGGGG----------------------------------------------------------------------AAGTGGG----------------------------------------------------------------AG-TTGGT------------------------ACCCTTTTTTAACTC---------------------------------------------------------------------------------CTCCTCCTCC------------TCC----------------------------------------------------------------------TCC------------------T--------------------------------CCTTTTCCCACAGACCTCCGCCACCGAGTGGCAGCAGTTTCTGGACCAATGCTTCGAGTCTTT
droAna3 scaffold_13117:5097527-5097613 - TTATCTAAACTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAACTAAACTGTAAT-------------------------CTTCT-----------CCAGACTTCCGCCACCGAATGGCAACAGTTCCTGGACCAATGCTTCGAGACTTT
droBip1 scf7180000396734:118027-118310 + CCAACAAGCCGGAGCTGGAGGTGCTCGACAACGAGCTCATGGAGGACGATGTGAGTATCTCTTATGGATACATACGGGCTCAGATAATGACCCTGTTTTCTTGATAAGAATTAGTCAGGAATATCTTGTAAGAGAACAGGGCTTATTATTTTTCCAATTCCGATAAGAGATTCGATCTAACTAGTTTCCAAAAGTTTCCAATTAGAC-TAAAC------------------------TCCCTTTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAA-----------------------T--CTCCT-----------CCAGACCTCCGCCACCGAATGGCAGCAGTTCCTGGACCAATGCTTCGAGACCCT
dp5 XL_group1e:4382968-4383139 - CGAATAAGCCCGAGCTAGAGGTGCTGGACAACGAGCTCATGGAGGATGATGTATGTTTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATTCAATC------------CCA----------------------------------------------------------------------TTCAAT----------------CCAATTGATCCAACTAATTCTTT--CTCCTCCCCTGGTGGGACAGACCCCCACCACCGAGTGGCAGCAGTTCCTTGATCAATGCTTCGAGTGCCT
droPer2 scaffold_17:1324655-1324826 - CGAATAAGCCCGAGCTAGAGGTGCTGGACAACGAGCTCATGGAGGATGATGTATGTTTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATTCAATC------------CCA----------------------------------------------------------------------TTCAAT----------------CCAATTGATCCAACTGATTCTTT--CTCCTCCCCTGGTGGGACAGACCCCCACCACCGAGTGGCAGCAGTTCCTTGATCAATGCTTCGAGTGCCT
droWil2 scf2_1100000004909:5165150-5165309 + CCAATAAGGCCGAATTGGAGGTACTAGACAACGAGATCATGGAAGATGATGTAAGTGATTG---------------------------------------------------------------------------------------------------------------------------------------------------------ATGTTTTT------------CGCACCCATTCTTAAACT---------------------------------------------------------------------------------CAATTCAATC------------TTA----------------------------------------------------------------------TGCA---------------------------------------------------------CAGCAGAGCCCCACCACAGAATGGCAACAATTTTTGGATCAATGTTTCGAATGTTT
droVir3 scaffold_13042:3682030-3682086 + TTAACAAGCCCGAGCTGGAGCTGCTGGACAATGAGCTCATGGAGGACGATGTGCGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6308:896439-896497 + CATTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGACGCCCACAACGGAATGGCAACAGTTTCTGGACCAGTGCTTCGAGTGCCT
droGri2 scaffold_14853:2583570-2583656 + TTAACAAGCCAGAGCTGGAGCTACTTGACAATGAGCTCATGGAGGAAGATGTACGTCCTT---G------------------------------------------------------------------------------------------------------------------------------------------------TTGCATATGATT------------------TTTATCTACAAATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CCAACAAACCCGAGCTAGAAGTGCTGGACAACGAGCTCATGGAGGACGATGTAAGTAGCTCTGA------------------------------------------------------------------------------------------------------------------------------------------------TTTAAAGTGTTT------------------TTTGGTGACAAATT--TCAAA----------------------------------------------------AACAAAGAAATAGACCTTGCATTAG------A------------ACGATCTTCA------------------------------------------------------------TT-------TTATCTAGACACTCATCC------------------------AATT-----------TCAGACCACCGCCACAGAGTGGCAGCAGTTTCTCGACCAATGCTTCGAGTCCCTSizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
.....................TGCTGGACAACGAGCTCATGGAGGACGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00200000000000011000
..........CGAGCTAGAAGTGCTGGACAACGAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000011000000000
.......ACCCGAGCTAGAAGTGCTGGACAACGAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000000000
......................GCTGGACAACGAGCTCATGGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000100000
........................TGGACAACGAGCTCATGGAGGACGATAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000000001000
........................TGGACAACGAGCTCATGGAGGACGATAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
...............TAGAAGTGCTGGACAACGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGTTTCTCGACCAATGCTTCGAG.....2611.00100000000000100000
.................GAAGTGCTGGACAACGAGCTCATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
........................TGGACAACGAGCTCATGGAGGACGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
.......................CTGGACAACGAGCTCATGGAGGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
........................TGGACAACGAGCTCATGGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000000000
droSec2
CCAACAAACCCGAGCTAGAAGTGCTGGACAACGAGCTCATGGAGGACGATGTAAGTAGCTCTTA------------------------------------------------------------------------------------------------------------------------------------------------TTTAAAGTGTTT------------------TTTGGTGACAAATT--TCGAA----------------------------------------------------AACAAAGAAATAGACCTTGCATTAG------A------------ACGATCTTCA------------------------------------------------------------TT-------TTATCTAGACACTCATCC------------------------AATT-----------TCAGACCACCGCCACAGAGTGGCAGCAGTTTCTAGACCAATGCTTCGAGTCCCTSizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGTTTCTAGACCA...............1811.0010010
..AACAAACCCGAGCTAGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
............AGCTAGAAGTGCTGGACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
dm3
CCAACAAACCCGAGCTAGAAGTGCTGGACAACGAGCTCATGGAGGACGATGTAAGTAGCTCTGA------------------------------------------------------------------------------------------------------------------------------------------------TTTAAAGTGTTT------------------TTAGGTGACAAATT--TCAAA----------------------------------------------------AACCAAGAAATAGACCTTGCATTAG------A------------ACGATCTTCA------------------------------------------------------------TT-------TTATCTAGACATTCATCC------------------------AATT-----------TCAGACCTCCGCCACTGAGTGGCAGCAGTTTCTAGACCAATGCTTCGAGTCCCTSizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
.............GCTAGAAGTGCTGGACAACGAGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000700400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AACCCGAGCTAGAAGTGCTGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................TT------------------TTAGGTGACAAATT--TCAGT----------------------------------------------------..........................................................................................................................................................................................................................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000003000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000100000000000000000000
.............GCTAGAAGTGCTGGACAACGAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2316.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AAGTGCTGGACAACGAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GCTGGACAACGAGCTCATGGAGGACGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TGCTGGACAACGAGCTCATGGAGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010001001000000000000000000
.....................TGCTGGACAACGAGCTCATGGAGGACG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................TTAGGTGACAAATT--TCAGT----------------------------------------------------..........................................................................................................................................................................................................................................1962.17130000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303200000000000000000000010000000000000000000000000100000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000100000000000000000000
................................GAGCTCATGGAGGACGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000001000000000000000000000000000000000000000000
...............TAGAAGTGCTGGACAACGAGCTCATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AGTGCTGGACAACGAGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TGCTGGACAACGAGCTCATGGAGGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AGTGCTGGACAACGAGCTCACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGCCACTGAGTGGCAGCAGTT........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................GTGCTGGACAACGAGCTCATGGAGGACG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TGGACAACGAGCTCATGGAGGACG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................TGCTGGACAACGAGCTCATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TGGACAACGAGCTCATGGAGGACGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AACGAGCTCATGGAGGACGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GAGCTAGAAGTGCTGGACAACGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................T-------TTATCTAGACATTCATCC------------------------AAT..................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CCCGAGCTAGAAGTGCTGGACAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CGAGCTAGAAGTGCTGGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CGAGCTAGAAGTGCTGGACAACGAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GTGCTGGACAACGAGCTCATGGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-----------TCAGACCTCCGCCACTGAGTGGCA..............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CTAGAAGTGCTGGACAACGAGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
........................TGGACAACGAGCTCATGGAGGACGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACATTCATCC------------------------AATT-----------TCAG..................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AAACCCGAGCTAGAAGTGCTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CGAGCTAGAAGTGCTGGACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....AAACCCGAGCTAGAAGTGCTGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AGCTAGAAGTGCTGGACAACGAGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCATCC------------------------AATT-----------TCAGACCTC.............................................2111.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AGTGCTGGACAACGAGCTCATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GCTAGAAGTGCTGGACAACGAGCTCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..AACAAACCCGAGCTAGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTGAGTGGCAGCAGTTTC......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTGGCAGCAGTTTCTAGACCAATGC...........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.................GAAGTGCTGGACAACGAGCTCATGGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACTGAGTGGCAGCAGT.........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CGAGCTAGAAGTGCTGGACAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGACCAATGCTTCGAG.....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................GACCTTGCATTAG------A------------ACGATCTT......................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....CAAACCCGAGCTAGAAGTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............AGCTAGAAGTGCTGGACAACGAGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................AGCTCATGGAGGACGATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GAAGTGCTGGACAACGAGCTCATGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AGCTAGAAGTGCTGGACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCATCC------------------------AATT-----------TCAGACCTCCGCC.........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GAAGTGCTGGACAACGAGCTCATGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TGCTGGACAACGAGCTCATGGAGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..AACAAACCCGAGCTAGAAGTGCTGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AACGAGCTCATGGAGGACGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AGAAGTGCTGGACAACGAGCTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................TTAGGTGACAAATT--TCAG...............................................................................................................................................................................................................................................................................................1821.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GTGCTGGACAACGAGCTCATGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
droEre2
CCAACAAACCCGAGCTAGAAGTGCTGGAAAACGAGCTCATGGAGAACGATGTATGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTTTCCTTTTTAGTATTTTATGTTAGATGACAAATT--TCAAA----------------------------------------------------AACGAAAAAATGTATTTTGCATTGG------C------------TCAATCGTCA-----------------------------------------------------------------------------------------------------------------TT-----------TCAGACCTTCGCCACCGAGTGGCAGCAGTTCCTGGATCAATGCTTCGAGTCCCTSizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
........................TGGAAAACGAGCTCATGGAGAACGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
.............GCTAGAAGTGCTGGAAAACGAGCTCAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
........CCCGAGCTAGAAGTGCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
........................TGGAAAACGAGCTCATGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
droYak3
CCAACAAGCCCGAGCTAGAAGTGCTGGACAACGAGCTCATGGAGGACGATGTGAGTAGAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAGATCTTGC--CAATGCAATC------------TCAATCGTCA------------------------------------------------------------CCTTGCA-------CAGACACTCATCCAACTGCACT------------ACCGATT-----------TCAGACCTCCGCCACAGAGTGGCAGCAGTTCCTGGACCAATGCTTCGAGTCCCTSizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTGGACCAATGCTTCGAGT....2311.00100000010000
............AGCTAGAAGTGCTGGACAACGAGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
..............CTAGAAGTGCTGGACAACGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
droEug1
CCAATAAACCCGAACTGGAGGTGCTGGACAACGAGCTTATGGAGGACGATGTGAGTGGTTTCGA----------------------------------------------------------------------------------------------------------------------------------------------GTTTTTAGGCCTTG------------------TTTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CCAACAAACCCGAACTGGAGGTGCTGGACAACGAGCTCATGGAGGACGATGTGAGTGGCTCGGT----------------------------------------------------------------------------------------------------------------------------------------------GTTTCGACGCCTTG------------------TTTGGCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CCAATAAACCCGAACTGGAGGTGCTGGACAACGAGCTCATGGAGGACGACGTGAGTGGTTTTGT----------------------------------------------------------------------------------------------------------------------------------------------AATTTGAGGCCTTG------------------TTTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CCAACAAACCCGAACTGGAGGTGCTGGATAACGAGCTCATGGAGGACGATGTGAGTGGCTCTAA----------------------------------------------------------------------------------------------------------------------------------------------G--TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CCAACCGACCCGAACTGGAGGTGCTGGACAACGAGCTTATGGAGGACGATGTAAGTGGCTCTGA----------------------------------------------------------------------------------------------------------------------------------------------GTTTTGCGGCCTTG------------------TTTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CCAACAAACCCGAACTGGAGGTGCTGGACAACGAGCTCATGGAGGACGATGTAAGTTGCTTCGA----------------------------------------------------------------------------------------------------------------------------------------------G-TTTGAGGCCTTG------------------TTTGGCA------CATTCGGAGGTCTTTGCGCGTGCGAATAAAGAGAAAGTTGTACCCCAAAGGTGGTTATGC--------AA-AAA---------------ACCAGCTACTGCAATTCAATCAGCAAGAAACTTTTATATTTACTTATAGTTATTTAAATTTAATAAGTTAAAATACACACATGTATCTTAAA-------CAGAA-----------TGTATT------------ACCAATT-----------TCAGGCCTCCGCCACCGAATGGCAGCAGTTCCTGGACCAATGCTTCGAGACCCTSizeHit CountTotal NormTotal
No Reads
droKik1
CCAACAAGCCCGAGCTGGAAGTTCTAGACAATGAGCTGATGGAGGATGATGTGAGTGGCAGGGG----------------------------------------------------------------------AAGTGGG----------------------------------------------------------------AG-TTGGT------------------------ACCCTTTTTTAACTC---------------------------------------------------------------------------------CTCCTCCTCC------------TCC----------------------------------------------------------------------TCC------------------T--------------------------------CCTTTTCCCACAGACCTCCGCCACCGAGTGGCAGCAGTTTCTGGACCAATGCTTCGAGTCTTTSizeHit CountTotal NormTotal
No Reads
droAna3
TTATCTAAACTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAACTAAACTGTAAT-------------------------CTTCT-----------CCAGACTTCCGCCACCGAATGGCAACAGTTCCTGGACCAATGCTTCGAGACTTTSizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGAATGGCAACAGTTCCTGGACC................2611.001010000
droBip1
CCAACAAGCCGGAGCTGGAGGTGCTCGACAACGAGCTCATGGAGGACGATGTGAGTATCTCTTATGGATACATACGGGCTCAGATAATGACCCTGTTTTCTTGATAAGAATTAGTCAGGAATATCTTGTAAGAGAACAGGGCTTATTATTTTTCCAATTCCGATAAGAGATTCGATCTAACTAGTTTCCAAAAGTTTCCAATTAGAC-TAAAC------------------------TCCCTTTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAA-----------------------T--CTCCT-----------CCAGACCTCCGCCACCGAATGGCAGCAGTTCCTGGACCAATGCTTCGAGACCCTSizeHit CountTotal NormTotal
No Reads
dp5
CGAATAAGCCCGAGCTAGAGGTGCTGGACAACGAGCTCATGGAGGATGATGTATGTTTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATTCAATC------------CCA----------------------------------------------------------------------TTCAAT----------------CCAATTGATCCAACTAATTCTTT--CTCCTCCCCTGGTGGGACAGACCCCCACCACCGAGTGGCAGCAGTTCCTTGATCAATGCTTCGAGTGCCTSizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGTTCCTTGATCAATGCTTCGAGT....2711.0010100000000
.....................TGCTGGACAACGAGCTCATGGAGGATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000010
.......GCCCGAGCTAGAGGTGCTGGACAACG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
................AGAGGTGCTGGACAACGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
.GAATAAGCCCGAGCTAGAGGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.GAATAAGCCCGAGCTAGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
droPer2
CGAATAAGCCCGAGCTAGAGGTGCTGGACAACGAGCTCATGGAGGATGATGTATGTTTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATTCAATC------------CCA----------------------------------------------------------------------TTCAAT----------------CCAATTGATCCAACTGATTCTTT--CTCCTCCCCTGGTGGGACAGACCCCCACCACCGAGTGGCAGCAGTTCCTTGATCAATGCTTCGAGTGCCTSizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
................AGAGGTGCTGGACAACGAGCTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
droWil2
CCAATAAGGCCGAATTGGAGGTACTAGACAACGAGATCATGGAAGATGATGTAAGTGATTG---------------------------------------------------------------------------------------------------------------------------------------------------------ATGTTTTT------------CGCACCCATTCTTAAACT---------------------------------------------------------------------------------CAATTCAATC------------TTA----------------------------------------------------------------------TGCA---------------------------------------------------------CAGCAGAGCCCCACCACAGAATGGCAACAATTTTTGGATCAATGTTTCGAATGTTTSizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
..AATAAGGCCGAATTGGAGGTACTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
..AATAAGGCCGAATTGGAGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
..AATAAGGCCGAATTGGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAATTTTTGGATCAATGTTTCGAAT....2711.00100010
...ATAAGGCCGAATTGGAGGTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
......................ACTAGACAACGAGATCATGGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
.............ATTGGAGGTACTAGACAACGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCACCACAGAATGGCAACG...........................2111.00100001
...................GGTACTAGACAACGAGATCAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001
...........GAATTGGAGGTACTAGACAACGAGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
...................GGTACTAGACAACGAGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
droVir3
TTAACAAGCCCGAGCTGGAGCTGCTGGACAATGAGCTCATGGAGGACGATGTGCGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
....................CTGCTGGACAATGAGCTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000010000000000000000000000000000000000000000000000000000000
droMoj3
CATTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGACGCCCACAACGGAATGGCAACAGTTTCTGGACCAGTGCTTCGAGTGCCTSizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGGACCAGTGCTTCGAGTGCCT2511.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGTTTCTGGACCAGTGCTTCGA......2711.001100000
droGri2
TTAACAAGCCAGAGCTGGAGCTACTTGACAATGAGCTCATGGAGGAAGATGTACGTCCTT---G------------------------------------------------------------------------------------------------------------------------------------------------TTGCATATGATT------------------TTTATCTACAAATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
..AACAAGCCAGAGCTGGAGCTACTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101

Generated: 05/18/2015 at 02:45 PM