ID:

dsi_21976

 Coordinate:

3r:24341611-24341878 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [3r_24341879_24342829_+]; CDS [3r_24341879_24342684_+]; exon [3r_24340303_24341610_+]; CDS [3r_24340303_24341610_+]; intron [3r_24341611_24341878_+]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CAACAAGCACGAAGATGTGATGGCGAAGTACGGTGCCATTCTGGCTCAGGGTAAGCAATATAACACGATCCCTTTTCGTTATTTAGACAATTATTTGTTAATTCGCATTCTTGAAAGATAAAAGGCGAAATTCTCACATCTATTAAACATTGGTTTCCGTCGTCTTCCCGCCAAGCTTCAAGATAAGATTAGTACATACTCAAAATTATAAATAATCCATTTAAAGCTAAGCGAACGGAACATAGGTATTTTGTAGGAATTTATAATTAGCAAATCGCCCTTTCCAGGTATTTCTAATTAGGCATTGACTTTTTTCAGGTATTATTGATGCTGGTGGCCGAAATGCTACTCTGTCCCTGCAATCCCGT
**************************************************..(((((((.....((((.......)))).............(((((((((((...(((((((.((((((..((((((........((............)).......))))))((((((..(((((..((((..(((((....(((........)))...))))).)))).)))))..)))...))).......)))))).)))))))....))))))))))).(((......(((....))).....))))))).))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM343915
embryo
 M023
head
 M024
male body		 M025
embryo
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
....................................................................................................................................................................TTTCCGGCAAGCTTCAAGA......................................................................................................................................................................................... 19 2 1 1.00 1 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................CGAAATGCTACTCTGTCCCTGC........ 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................TGATGCTGGTGGCCGAAATGC...................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................AGTACGGTGCCATTCTGGCTCAGGGTA........................................................................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................GAAACGCTACTCTGTCCC........... 18 1 1 1.00 1 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................TAAGTAGGCATTGACTT......................................................... 17 1 5 0.20 1 0 0 0 0 1 0 0 0 0
......................................................................................................................................................................................................................................................................................................TAAGTAGGCATTGACT.......................................................... 16 1 6 0.17 1 0 0 0 0 1 0 0 0 0
.......................................................................................................................AAAAGGCGAAACTCTC......................................................................................................................................................................................................................................... 16 1 8 0.13 1 0 0 0 0 0 0 1 0 0
..............AGGTGAAGGCGAAGTACGGG.............................................................................................................................................................................................................................................................................................................................................. 20 3 11 0.09 1 0 0 0 0 0 1 0 0 0
...............................................................................................................................................................................CCTCAAGATAAGATT.................................................................................................................................................................................. 15 1 13 0.08 1 0 0 0 0 0 0 0 1 0
.....................................ATTCTGGCTCAGAGTGA.......................................................................................................................................................................................................................................................................................................................... 17 2 15 0.07 1 0 0 0 0 0 1 0 0 0
..........................................................................................................................................................................GCACGCTTCAAGATAAGG.................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

GTTGTTCGTGCTTCTACACTACCGCTTCATGCCACGGTAAGACCGAGTCCCATTCGTTATATTGTGCTAGGGAAAAGCAATAAATCTGTTAATAAACAATTAAGCGTAAGAACTTTCTATTTTCCGCTTTAAGAGTGTAGATAATTTGTAACCAAAGGCAGCAGAAGGGCGGTTCGAAGTTCTATTCTAATCATGTATGAGTTTTAATATTTATTAGGTAAATTTCGATTCGCTTGCCTTGTATCCATAAAACATCCTTAAATATTAATCGTTTAGCGGGAAAGGTCCATAAAGATTAATCCGTAACTGAAAAAAGTCCATAATAACTACGACCACCGGCTTTACGATGAGACAGGGACGTTAGGGCA
**************************************************..(((((((.....((((.......)))).............(((((((((((...(((((((.((((((..((((((........((............)).......))))))((((((..(((((..((((..(((((....(((........)))...))))).)))).)))))..)))...))).......)))))).)))))))....))))))))))).(((......(((....))).....))))))).))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
............................................................................................................................................................................TTCGAAGTTCTAGTCTAAGTAT.............................................................................................................................................................................. 22 3 2 0.50 1 0 1 0 0 0 0 0 0
.............................................................TTGTAGTAGGGAAAAGCAA................................................................................................................................................................................................................................................................................................ 19 2 2 0.50 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................AATCATGTCTGAATTTTAA................................................................................................................................................................. 19 2 9 0.33 3 0 0 3 0 0 0 0 0
............................................................ATTGGGCTAGGGGAAAGC.................................................................................................................................................................................................................................................................................................. 18 2 4 0.25 1 0 0 0 0 1 0 0 0
........................................................................................................................................................................................................................................................................................CAAGGTCCAGAAAGATTA...................................................................... 18 2 4 0.25 1 0 0 0 0 0 1 0 0
.......................................................................................................................................................................................................................AGGTAAGTTTCGATTCAAT...................................................................................................................................... 19 3 20 0.15 3 0 0 0 2 1 0 0 0
.......................................................................................................................................................................................................................AGGTAAGTTTCGATT.......................................................................................................................................... 15 1 15 0.07 1 0 0 0 1 0 0 0 0
.................................................................................................................................TAAGAGTGTAGAGAA................................................................................................................................................................................................................................ 15 1 20 0.05 1 0 0 0 0 0 0 0 1
................................................................................................................................................................................................ATGTTGGAGTTTTAATA............................................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 1 0
.......................................................................................................................................................................................................................AGGTAAGTTTCGATTCA........................................................................................................................................ 17 2 20 0.05 1 0 0 0 1 0 0 0 0
........................................................TGATATAGTGCAAGGGAAA..................................................................................................................................................................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0
.........................................................................................TAAAAAACAAATAAGCGTA.................................................................................................................................................................................................................................................................... 19 2 20 0.05 1 0 0 0 1 0 0 0 0
......................................................................................................................................................................................................................AAGGTAAGTTTCGATTC......................................................................................................................................... 17 2 20 0.05 1 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................AACTACGACCAACGGTT........................... 17 2 20 0.05 1 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:24341561-24341928 + dsi_21976 CAAC---AAGCACGAAGATGTGATGGCGAAGTACGGTGCCATTCTGGCTCAGGGTAAGCAATAT-------------------------------------------------------------------------------------------------------------------------AACACGATCCCTTTTCGTTA----------------TTTAGACAAT---------------------------------TAT---------------------TTGTTAATTCGCATTCTTGAAAGATAAAAGGCGAAA----TTCT-----------------------------------------------CAC---------------ATCTATTAAACATTGGT------TTC-CGTCGTCTTCCCGCCAAGCTTCAAGATAAGATTAGTACATACTCAAAATTATAAATAATCCATTTAAAGCTAAGCGAACGGAA-CATAGGTATTT-TGTAGGA---------------------------------------------------------ATTTATAAT-------TAGCAAA------------------------------------TCG-----------------CCCTTTCCAGGTATTTCTAATTA-GG-CATT---------------------------------------------------------------GA-CTTTT---TTCAGGTATTATTGATGCTGGTGGCCGAAATGCTACTCTGTCCCTGCAATCCCGT
droSec2 scaffold_4:3846288-3846654 + CAAC---AAGCACGAAGATGTGATGGCGAAGTACGGTGCCATTCTGGCTCAGGGTAAGCAATAT-------------------------------------------------------------------------------------------------------------------------AACACGATCCCTTTTCGCTA----------------TTTAGACAAT---------------------------------TAT---------------------TTGTTAATTCGCATTGTTGAAAGATAAAAGGCGAAA----TTCT-----------------------------------------------CAC---------------ATCTATTAAACATTGGT------TTC-CGTCGTTTTCCCTCCAAGCTTCAAGATAAGATTAGTACATACTCAAAATTATAAATAATCCATTTAAAGCTAAGCGAACGG-C-CATAGGTATTT-TTTAGGA---------------------------------------------------------ATTTATAAT-------TAGCAAA------------------------------------TCG-----------------CCCTTTCCAGGTATTTCTAATTA-GG-CATT---------------------------------------------------------------GA-CTTTT---TTCAGGTATTATTGATGCTGGTGGCCGAAATGCTACTCTGTCCCTGCAATCCCGT
dm3 chr3R:24981716-24982073 + CAAC---AAGCACGAAGATGTGATGGCGAAGTACGGTGCCATTTTGGCTCAGGGTAAGCAATAT-------------------------------------------------------------------------------------------------------------------------AACACGATCCCTTTTCGTTA----------------TTTATGCAAT---------------------------------TAT-AT--TGAAAAGCTAATTAGTTTGTTAATTTG----------------------------------------------------------------------------------C---------------ATCTATTAAACATTGGT------TTC-CGTAGTTTTCCCGCCAAGCTTCGAGATAAGATTAGTAGATACTCAAAATTATAAATATTCCATTTTTAACTAAGCGAACGA-C-TATAGGTATTTTTGTAGGAAT---------------------TG--------------------------------ATTTATAAT-------TAGTA-A------------------------------------TCG-----------------TCCTTTCCAGATCTTTCTAATTA-GG-CATT---------------------------------------------------------------GA-CTATT---TCCAGGTATTATTGATGCTGGTGGCCGAAACGCTACTCTGTCCCTGCAGTCCCGT
droEre2 scaffold_4820:3049693-3050002 - der_934 CAAC---AAGCACGAAGATGTAATGGCGAAGTACGGTGCCATTCTTGCTCAGGGTAAGCAATTT-------------------------------------------------------------------------------------------------------------------------AAAACAATCCTTTTTCGTTA----------------CTTAGCCAAT---------------------------------TTGTTTT----------------------------------------------GGCGAAA----TTCT-----------------------------------------------CAC---------------ATCTATTAAACATTGGT------G-----------------------------------TAGTATCTACCCAAAATTATAAGTATT--ATTTATAACTAAACGAACAG-C-CATAGGTATTT-TGTAGGATG---------------------TG--------------------------------ATTTATAAT-------TAGCAAA------------------------------------TAA-----------------CACTTCTCAGATCTTTCTAATTG-GG-CATT---------------------------------------------------------------AA-CTTAT---TCCAGGTATTATTGATGCTGGTGGCCGAAACGCTACTCTGTCCCTGCAATCCCGT
droYak3 3R:21516244-21516595 - CAAC---AAGCACGAAGATGTGATGGCAAAGTACGGTGCCATTCTGGCTCAAGGTAAGCAATTA-------------------------------------------------------------------------------------------------------------------------AAGACAATCCTTTTTCGTTA----------------C-----------------------------------------ATTGTTTTGTGA--------------------------------AAAGATAATAGGCGATA----TTCT-----------------------------------------------CAC---------------ATCTATTAAACATTGGT------GTC-TGTCGTTTTCACACTTAGCTTCATGATAAGATTAGTACCTACTCAAAATTATAAGTATTATATTTATAACTAAGCGAACAG-C-CATCGGTAATT-CGTAGGCAT---------------------TG--------------------------------ATTTATAAT-------TAGCATA------------------------------------TCG-----------------CCCCTTCTAGATCTTTCTAATTA-GG-CATT---------------------------------------------------------------AA-CTTTT---TCCAGGTATTATTGATGCTGGTGGCCGAAATGCTACTCTGTCCCTGCAATCGCGT
droEug1 scf7180000409787:593462-593550 - CAAC---AAGCACGAAGATGTGATGGCTAAGTATGGCGCTATTCTCGCTCAGGGTAAGCATAATCGAAATCCGATCCCTTG-----------------------------------------------------------------------------------------------------------------------TATTG----------------CTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA
droBia1 scf7180000302136:3161628-3161899 - AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCT-----------------------------------------------CAC---------------ACTTATTATGTGATG----TAGTTTC-TGCCATTTTCGCGGCTACTATCGCGATAAGATAAGTTTTTACTGAAAATCA----TATTCCATTTGTTACTAAGCCTAGAG-C-TTAAAATATTA-TGTAGAATGT---CTAAGAGTTTC----TGTGATTCATAAGT-TTAT----TGCATTT------------------CAGAAAAAGATATCCCAAA----CAAT-------------------------------------------------------------------CATT---------------------------------------------AAAACAGTAACTACATC-TA-ATTTT---AACAGGCATTATTGACGCTGGTGGTAGGAACGCCACCCTGTCCCTGCAATCCCGC
droTak1 scf7180000415310:237431-237740 + AAAACTTAAACATAAAGTTCTCAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTATTAGATAGTT---ATAGTGTG-TGGCATTTTCAAGCCCAGTGTCGCGATAAGATAAGTTTTTAACGAAAA-CATTTTTATTATATTTGTTACTAAGCCTACAA-T-TTAAAATATTA-TCTAGAATTA---CCAATGATTTC----TGTGATTCATAGGT-GTATTTTTTAAATTTC-----GTGAATAATTGTCCAATAGCGTA------------------------------------TTG-----------------TC-TCTCGAGATCTTCCTAATCA-AGTCATTCTA------------------------------------------------------------AA-ACTTT---TACAGGCATTATTGATGCTGGTGGTAGGAATGCCACTCTGTCCCTGCAATCCCGC
droEle1 scf7180000491280:1163894-1164352 + CAAC---AAGCACGAAGATGTGATGGCCAAGTATGGCGCTATTCTGGCTCAGGGTAAGCACAAAACAAATTTTTTCCC-TAAATCTTCTTTAAACCCCACATATAAAAATAATTCAGTTAGACACTGCGTCATTACTTTCATAACCTAATCATTACTTTTAAATCCATGTAAGCCTTAAGTAAAGAATACAGCCCTTTTGCGCAAAACTTTGCGAATATTGT-----------------------------------------ATTGTTTT-----------------------------------------------------------------------------------------------------------------------------------------------AGAG--GTG-TGACGTATTCCCGCTTAAATTAATGATAATATAAGA--------------------------TTTTTTACTATGTCTACAC-------AATATTA-TTGAGAATTATCCCTAACAATTCC----TGTGATTAGTATTT-TTAA----C--AAAAAGTCGAAT---CAAT-------AAGAATA------------------------------------TTG-----------------CCCTTA---------TATAAATA-AC-CATT---------------------------------------------AAAT------CTAACGCCAAATTTTT---TTTAGGAATTATTGATGCTGGTGGTCGGAATGCCACTCTATCCCTGCAATCTCGC
droRho1 scf7180000779516:32101-32562 - CAAC---AAGCACGAAGATGTTATGGCCAAGTATGGCGCTATTCTGGCACAGGGTAAGCACAAAAAAA-TTATATTCCTTGTATTA----------------------------------------------------------------------------------------------------------------------G----------------CTTA-AAAATAATCCTTTGGGGTGTGGGACATTTTTATTTCCACTTTTTCGAGA--------------------------------A------AATTGCGGAA----TACAATTTACTTTTTATGGAGATTGAGAATATGCCGGCGTTTGACTACAAATACATACATTTGATTTTACTCTTCGA---------AGTACTGTG-TGACGTTTTCTCGCCTAATTAATTGTTAAGATTCTGTTTTAA-------------TATTTTGTTTCTTACTAAG-------------------------------------------TTC----TGTGATTCATGTTG-TTAT----T------------------------C----------AGCCCATA----CAATATTTATTTTATTTTTATAAAGCTAGCTTAGCGGTAATAATTATTTA---------TATATATA-AT-GAAT---------------------------------------------TAAT------CTAACACCAA-C-TTT---TTCAGGCATTATTGATGCTGGTGGTCGAAATGCCACTCTATCCCTGCAATCCCGC
droFic1 scf7180000453776:276738-277011 + CAAT---AAGCACGAAGATGTGATGGCCAAGTATGGCGCTATTCTGGCTCAGGGTAAGTGTAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAAAAAA---------------------------------AGG-AC--AGAAGGGTTGAGTGGATTTTTAAT-------AATTA----------------GCTC----------------------TAGAAAATATACAAGC-----CCTCAA-------ACATTCTTTTTGCGTGTTTAA---------AATACTAACGCTTC-----------------------------------------------TTAAGAGTCTATATAAAATATAGTAATAAAAA-TATATATATTT-TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT---------------------------------------------------------------TA-TAATA---TTCAGGCATTATTGATGCAGGTGGTAGGAATGCCACTCTGTCCCTGCAATCACGA
droKik1 scf7180000302466:499517-499577 - CAAC---AAGCACGAGGACGTTATGGCCAAGTATGGCGCTATTCTGGCTCAGGGTAAGTGGTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13340:14259616-14259700 - TTTT---ATGCATTTATAAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT---------------------------------------------------------------GT-CGTTT---TTCAGGCATCATTGACGCTGGTGGCAGGAACGCAACCCTTTCGCTGCAATCCCGC
droBip1 scf7180000395971:904913-905032 + GTAG---GA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCT-----------------------------------------------AAA---------------ATCAATTCCA-ATTGGA------TTC-TG----------------------------------------------------------------------------------------------------------------------------CGA----------------------------------------------------------------------------------------------------------------------------TTCTAACAA-GA-CATCATT------------------------------------------------------------AA-CTTTTCAATTCAGGCATCATTGATGCTGGTGGCAGGAACGCAACCCTCTCGTTGCAGTCTCGC
dp5 2:3128691-3128745 + CAAC---AAACACGAGGATGTCATGGCCAAATACGGCGCCATCTTGGCACAAGGTGAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_7:1213736-1213790 - CAAC---AAACACGAGGATGTCATGGCCAAATACGGCGCCATCTTGGCACAAGGTGAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004921:1672839-1672891 + CAAC---AAGCATGAAGATGTTATGGCCAAATACGGAGCCATTCTCGCTCAAGGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12822:2247949-2248053 + CAAC---AAACACGAGGATGTCATGGCCAAATATGGTGCCATTTTGGCACAAGGTGGGTGACAAACA--CTTGATTCCATG-----------------------------------------------------------------------------------------------------------------------CA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTGTCTTATTTGATATT---------TCTTCTTGA
droMoj3 scaffold_6540:26383109-26383197 + TTGC---AT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTAA---------AGTACTG---CTTTTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------------------------------------------------CT-CTGCT---TGCAGGTATCATTGATGCTGGCGGTCGCAACGCCACGCTCTCGCTTCAATCTCGC
droGri2 scaffold_14624:3182989-3183411 + CAAC---AAGCACGAGGATGTCATGGCCAAATATGGAGCTATTCTGGCTCAAGGTGAGTCCAAGATAT-TTAT------------------------------------------------------------------------------------------------------------------------------AGATGA----------------AGTATGCAAT---------------------------------TAT---------------------CTGTT---TTTCATTATTCA----------------AAT-----------------------TCAAAGATCTAAGATC-----ACTACA-------ACATTTGTTCTTACTGATAAA---------AATATCAACC--------------------------------------------------ATTTGTTTTGCACTTTTCATTAAATGTTGAT-TATTAATATATTG-TTTAATGTTT---GTTGTAATTTTATCACTTGTTTTATGAGCCTTAT----TTCATTT------------------CCAAAAACGTATTCATAAATTTACAATTC-------------TGAAAGCA-----------------TTTCTTG-------------TGAGAGTGATTCTATTATTTATCTCGCAACTGAATAATAACTGATTGATATTTAATAAAT------CT----TTA----ACT---TGCAGGCATCATCGATGCTGGCGGTCGCAATGCGACGCTCTCGCTGCAATCCCGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CAAC---AAGCACGAAGATGTGATGGCGAAGTACGGTGCCATTCTGGCTCAGGGTAAGCAATAT-------------------------------------------------------------------------------------------------------------------------AACACGATCCCTTTTCGTTA----------------TTTAGACAAT---------------------------------TAT---------------------TTGTTAATTCGCATTCTTGAAAGATAAAAGGCGAAA----TTCT-----------------------------------------------CAC---------------ATCTATTAAACATTGGT------TTC-CGTCGTCTTCCCGCCAAGCTTCAAGATAAGATTAGTACATACTCAAAATTATAAATAATCCATTTAAAGCTAAGCGAACGGAA-CATAGGTATTT-TGTAGGA---------------------------------------------------------ATTTATAAT-------TAGCAAA------------------------------------TCG-----------------CCCTTTCCAGGTATTTCTAATTA-GG-CATT---------------------------------------------------------------GA-CTTTT---TTCAGGTATTATTGATGCTGGTGGCCGAAATGCTACTCTGTCCCTGCAATCCCGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAATGCTACTCTGTCCCTGC........2211.00100100000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGCTGGTGGCCGAAATGC......................2111.00100000000000100000
.............................AGTACGGTGCCATTCTGGCTCAGGGTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000000100000
droSec2
CAAC---AAGCACGAAGATGTGATGGCGAAGTACGGTGCCATTCTGGCTCAGGGTAAGCAATAT-------------------------------------------------------------------------------------------------------------------------AACACGATCCCTTTTCGCTA----------------TTTAGACAAT---------------------------------TAT---------------------TTGTTAATTCGCATTGTTGAAAGATAAAAGGCGAAA----TTCT-----------------------------------------------CAC---------------ATCTATTAAACATTGGT------TTC-CGTCGTTTTCCCTCCAAGCTTCAAGATAAGATTAGTACATACTCAAAATTATAAATAATCCATTTAAAGCTAAGCGAACGG-C-CATAGGTATTT-TTTAGGA---------------------------------------------------------ATTTATAAT-------TAGCAAA------------------------------------TCG-----------------CCCTTTCCAGGTATTTCTAATTA-GG-CATT---------------------------------------------------------------GA-CTTTT---TTCAGGTATTATTGATGCTGGTGGCCGAAATGCTACTCTGTCCCTGCAATCCCGTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................ATGTGATGGCGAAGTACGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
.........GCACGAAGATGTGATGGCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
..............AAGATGTGATGGCGAAGTACGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGCTACTCTGTCCCTGCAATCCC..2611.0011000
........AGCACGAAGATGTGATGGCGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
.AAC---AAGCACGAAGATGTGATGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
dm3
CAAC---AAGCACGAAGATGTGATGGCGAAGTACGGTGCCATTTTGGCTCAGGGTAAGCAATAT-------------------------------------------------------------------------------------------------------------------------AACACGATCCCTTTTCGTTA----------------TTTATGCAAT---------------------------------TAT-AT--TGAAAAGCTAATTAGTTTGTTAATTTG----------------------------------------------------------------------------------C---------------ATCTATTAAACATTGGT------TTC-CGTAGTTTTCCCGCCAAGCTTCGAGATAAGATTAGTAGATACTCAAAATTATAAATATTCCATTTTTAACTAAGCGAACGA-C-TATAGGTATTTTTGTAGGAAT---------------------TG--------------------------------ATTTATAAT-------TAGTA-A------------------------------------TCG-----------------TCCTTTCCAGATCTTTCTAATTA-GG-CATT---------------------------------------------------------------GA-CTATT---TCCAGGTATTATTGATGCTGGTGGCCGAAACGCTACTCTGTCCCTGCAGTCCCGTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGCTGGTGGCCGAAACG.......................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000020000
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..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCTGGTGGCCGAAACGCT.....................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATTGATGCTGGTGGCCGA...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
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..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCTGGTGGCCGAAACGCTA....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAGATAAGATTAGTAGATACT....................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATTGATGCTGGTGGCCGAAACGC......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
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.......................TGGCGAAGTACGGTGCCATTTTGGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
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.................ATGTGATGGCGAAGTACGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
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............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCTACTCTGTCCCTGC........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................AAGTACGGTGCCATTTTGGCTCAGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTAGGAAT---------------------TG--------------------------------ATTTATAA.......................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................GATGGCGAAGTACGGTGCCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
........AGCACGAAGATGTGATGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.....................GATGGCGAAGTACGGTGCCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................AAGTACGGTGCCATTTTGGCTCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
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.......................TGGCGAAGTACGGTGCCATTTTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCCCGCCAAGCTTCGAGAT....................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GAAGATGTGATGGCGAAGTACGGTGCCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................GATGTGATGGCGAAGTACGGTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCTGGTGGCCGAAACGC......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
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...........................GAAGTACGGTGCCATTTTGGCTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
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.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTATTGATGCTGGTGGCC.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................TGATGGCGAAGTACGGTGCCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................T-AT--TGAAAAGCTAATTAGTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
...........ACGAAGATGTGATGGCGAAGTAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCAGATCTTTCTAATTA-GG-CAT..................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.............................AGTACGGTGCCATTTTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAACTAAGCGAACGA-C-TAT........................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATGCTGGTGGCCGAAACG.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................TGGCGAAGTACGGTGCCATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCGAAACGCTACTCTGTCCC...........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GAAGATGTGATGGCGAAGTACGGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACTCTGTCCCTGCAGTCCCG.2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGATTAGTAGATACTCAAA................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TTAAACATTGGT------TTC-CGTAGT.........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..................TGTGATGGCGAAGTACGGTGCCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............AGATGTGATGGCGAAGTACGGTGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTTTCCAGATCTTTCTAATTA-GG-CATT---------------------------------------------------------------G.................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATTGATGCTGGTGGCCGAAACG.......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATGCTGGTGGCCGAAACGC......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
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............CGAAGATGTGATGGCGAAGTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
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..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGCTGGTGGCCGAAACGCTACT..................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATTGATGCTGGTGGCCGAAAC........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTATTGATGCTGGTGGC..............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATGCTGGTGGCCGAAAC........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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....................TGATGGCGAAGTACGGTGCCAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
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.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGATGCTGGTGGCCGAAACGCT.....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...............AGATGTGATGGCGAAGTACGGTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...C---AAGCACGAAGATGTGATGGCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.............GAAGATGTGATGGCGAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTAATTA-GG-CATT---------------------------------------------------------------GA-CTATT---TCCAG..................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAACGCTACTCTGTCCCT..........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................GGTGCCATTTTGGCTCAGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
CAAC---AAGCACGAAGATGTGATGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGCTGGTGGCCGAAAC........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................T-AT--TGAAAAGCTAATTAGTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
............CGAAGATGTGATGGCGAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
............................AAGTACGGTGCCATTTTGGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
........................GGCGAAGTACGGTGCCATTTTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GATGGCGAAGTACGGTGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATAAGATTAGTAGATACT....................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGCTGGTGGCCGAAA.........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CAAC---AAGCACGAAGATGTAATGGCGAAGTACGGTGCCATTCTTGCTCAGGGTAAGCAATTT-------------------------------------------------------------------------------------------------------------------------AAAACAATCCTTTTTCGTTA----------------CTTAGCCAAT---------------------------------TTGTTTT----------------------------------------------GGCGAAA----TTCT-----------------------------------------------CAC---------------ATCTATTAAACATTGGT------G-----------------------------------TAGTATCTACCCAAAATTATAAGTATT--ATTTATAACTAAACGAACAG-C-CATAGGTATTT-TGTAGGATG---------------------TG--------------------------------ATTTATAAT-------TAGCAAA------------------------------------TAA-----------------CACTTCTCAGATCTTTCTAATTG-GG-CATT---------------------------------------------------------------AA-CTTAT---TCCAGGTATTATTGATGCTGGTGGCCGAAACGCTACTCTGTCCCTGCAATCCCGTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAACGCTACTCTGTCCCTG.........2111.0011000000
.........GCACGAAGATGTAATGGCGAAGTAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
...................GTAATGGCGAAGTACGGTGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAACGCTACTCTGTCCCTGC........2211.0010000010
droYak3
CAAC---AAGCACGAAGATGTGATGGCAAAGTACGGTGCCATTCTGGCTCAAGGTAAGCAATTA-------------------------------------------------------------------------------------------------------------------------AAGACAATCCTTTTTCGTTA----------------C-----------------------------------------ATTGTTTTGTGA--------------------------------AAAGATAATAGGCGATA----TTCT-----------------------------------------------CAC---------------ATCTATTAAACATTGGT------GTC-TGTCGTTTTCACACTTAGCTTCATGATAAGATTAGTACCTACTCAAAATTATAAGTATTATATTTATAACTAAGCGAACAG-C-CATCGGTAATT-CGTAGGCAT---------------------TG--------------------------------ATTTATAAT-------TAGCATA------------------------------------TCG-----------------CCCCTTCTAGATCTTTCTAATTA-GG-CATT---------------------------------------------------------------AA-CTTTT---TCCAGGTATTATTGATGCTGGTGGCCGAAATGCTACTCTGTCCCTGCAATCGCGTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................GTACGGTGCCATTCTGGCTCAAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
................GATGTGATGGCAAAGTACGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
..........................................................................................................................................................................................................................................................................................................................ATAGGCGATA----TTCT-----------------------------------------------CAC---------------ATCTATTA..................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
.............GAAGATGTGATGGCAAAGTACGGTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
............CGAAGATGTGATGGCAAAGTACG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
.AAC---AAGCACGAAGATGTGATGGCAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
........AGCACGAAGATGTGATGGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCTACTCTGTCCCTGC........1911.00100100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAGATTAGTACCTACT....................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
................GATGTGATGGCAAAGTACGGTGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
...............AGATGTGATGGCAAAGTACGGTGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.......AAGCACGAAGATGTGATGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.AAC---AAGCACGAAGATGTGATGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCCGAAATGCTACTCTGTCCCC..........2511.00110000000000
CAAC---AAGCACGAAGATGTGATGGCAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
..............AAGATGTGATGGCAAAGTACGGTGCCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
droEug1
CAAC---AAGCACGAAGATGTGATGGCTAAGTATGGCGCTATTCTCGCTCAGGGTAAGCATAATCGAAATCCGATCCCTTG-----------------------------------------------------------------------------------------------------------------------TATTG----------------CTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GASizeHit CountTotal NormTotal
No Reads
droBia1
AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCT-----------------------------------------------CAC---------------ACTTATTATGTGATG----TAGTTTC-TGCCATTTTCGCGGCTACTATCGCGATAAGATAAGTTTTTACTGAAAATCA----TATTCCATTTGTTACTAAGCCTAGAG-C-TTAAAATATTA-TGTAGAATGT---CTAAGAGTTTC----TGTGATTCATAAGT-TTAT----TGCATTT------------------CAGAAAAAGATATCCCAAA----CAAT-------------------------------------------------------------------CATT---------------------------------------------AAAACAGTAACTACATC-TA-ATTTT---AACAGGCATTATTGACGCTGGTGGTAGGAACGCCACCCTGTCCCTGCAATCCCGCSizeHit CountTotal NormTotal
No Reads
droTak1
AAAACTTAAACATAAAGTTCTCAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCTATTAGATAGTT---ATAGTGTG-TGGCATTTTCAAGCCCAGTGTCGCGATAAGATAAGTTTTTAACGAAAA-CATTTTTATTATATTTGTTACTAAGCCTACAA-T-TTAAAATATTA-TCTAGAATTA---CCAATGATTTC----TGTGATTCATAGGT-GTATTTTTTAAATTTC-----GTGAATAATTGTCCAATAGCGTA------------------------------------TTG-----------------TC-TCTCGAGATCTTCCTAATCA-AGTCATTCTA------------------------------------------------------------AA-ACTTT---TACAGGCATTATTGATGCTGGTGGTAGGAATGCCACTCTGTCCCTGCAATCCCGCSizeHit CountTotal NormTotal
No Reads
droEle1
CAAC---AAGCACGAAGATGTGATGGCCAAGTATGGCGCTATTCTGGCTCAGGGTAAGCACAAAACAAATTTTTTCCC-TAAATCTTCTTTAAACCCCACATATAAAAATAATTCAGTTAGACACTGCGTCATTACTTTCATAACCTAATCATTACTTTTAAATCCATGTAAGCCTTAAGTAAAGAATACAGCCCTTTTGCGCAAAACTTTGCGAATATTGT-----------------------------------------ATTGTTTT-----------------------------------------------------------------------------------------------------------------------------------------------AGAG--GTG-TGACGTATTCCCGCTTAAATTAATGATAATATAAGA--------------------------TTTTTTACTATGTCTACAC-------AATATTA-TTGAGAATTATCCCTAACAATTCC----TGTGATTAGTATTT-TTAA----C--AAAAAGTCGAAT---CAAT-------AAGAATA------------------------------------TTG-----------------CCCTTA---------TATAAATA-AC-CATT---------------------------------------------AAAT------CTAACGCCAAATTTTT---TTTAGGAATTATTGATGCTGGTGGTCGGAATGCCACTCTATCCCTGCAATCTCGCSizeHit CountTotal NormTotal
No Reads
droRho1
CAAC---AAGCACGAAGATGTTATGGCCAAGTATGGCGCTATTCTGGCACAGGGTAAGCACAAAAAAA-TTATATTCCTTGTATTA----------------------------------------------------------------------------------------------------------------------G----------------CTTA-AAAATAATCCTTTGGGGTGTGGGACATTTTTATTTCCACTTTTTCGAGA--------------------------------A------AATTGCGGAA----TACAATTTACTTTTTATGGAGATTGAGAATATGCCGGCGTTTGACTACAAATACATACATTTGATTTTACTCTTCGA---------AGTACTGTG-TGACGTTTTCTCGCCTAATTAATTGTTAAGATTCTGTTTTAA-------------TATTTTGTTTCTTACTAAG-------------------------------------------TTC----TGTGATTCATGTTG-TTAT----T------------------------C----------AGCCCATA----CAATATTTATTTTATTTTTATAAAGCTAGCTTAGCGGTAATAATTATTTA---------TATATATA-AT-GAAT---------------------------------------------TAAT------CTAACACCAA-C-TTT---TTCAGGCATTATTGATGCTGGTGGTCGAAATGCCACTCTATCCCTGCAATCCCGCSizeHit CountTotal NormTotal
No Reads
droFic1
CAAT---AAGCACGAAGATGTGATGGCCAAGTATGGCGCTATTCTGGCTCAGGGTAAGTGTAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAAAAAA---------------------------------AGG-AC--AGAAGGGTTGAGTGGATTTTTAAT-------AATTA----------------GCTC----------------------TAGAAAATATACAAGC-----CCTCAA-------ACATTCTTTTTGCGTGTTTAA---------AATACTAACGCTTC-----------------------------------------------TTAAGAGTCTATATAAAATATAGTAATAAAAA-TATATATATTT-TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT---------------------------------------------------------------TA-TAATA---TTCAGGCATTATTGATGCAGGTGGTAGGAATGCCACTCTGTCCCTGCAATCACGASizeHit CountTotal NormTotal
No Reads
droKik1
CAAC---AAGCACGAGGACGTTATGGCCAAGTATGGCGCTATTCTGGCTCAGGGTAAGTGGTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
TTTT---ATGCATTTATAAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT---------------------------------------------------------------GT-CGTTT---TTCAGGCATCATTGACGCTGGTGGCAGGAACGCAACCCTTTCGCTGCAATCCCGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATTGACGCTGGTGGCAGGAACGC......................2612.002010010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCCTTTCGCTGCAATCCC..2011.001001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATTGACGCTGGTGGCAGGAACG.......................2511.001000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATTGACGCTGGTGGCAGGAACGCA.....................2711.001000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACGCTGGTGGCAGGAACGC......................2211.001000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATTGACGCTGGTGGCAGGAG.........................2211.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATCATTGACGCTGGTGGCAG............................2311.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGTGGCAGGAACGCAACCC.................2111.001100000
droBip1
GTAG---GA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCT-----------------------------------------------AAA---------------ATCAATTCCA-ATTGGA------TTC-TG----------------------------------------------------------------------------------------------------------------------------CGA----------------------------------------------------------------------------------------------------------------------------TTCTAACAA-GA-CATCATT------------------------------------------------------------AA-CTTTTCAATTCAGGCATCATTGATGCTGGTGGCAGGAACGCAACCCTCTCGTTGCAGTCTCGCSizeHit CountTotal NormTotal
No Reads
dp5
CAAC---AAACACGAGGATGTCATGGCCAAATACGGCGCCATCTTGGCACAAGGTGAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................AATACGGCGCCATCTTGGCACAAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.AAC---AAACACGAGGATGTCATGGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
droPer2
CAAC---AAACACGAGGATGTCATGGCCAAATACGGCGCCATCTTGGCACAAGGTGAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......AAACACGAGGATGTCATGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
droWil2
CAAC---AAGCATGAAGATGTTATGGCCAAATACGGAGCCATTCTCGCTCAAGGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......AAGCATGAAGATGTTATGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
droVir3
CAAC---AAACACGAGGATGTCATGGCCAAATATGGTGCCATTTTGGCACAAGGTGGGTGACAAACA--CTTGATTCCATG-----------------------------------------------------------------------------------------------------------------------CA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTGTCTTATTTGATATT---------TCTTCTTGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........ACACGAGGATGTCATGGCCAAATATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000001000000000000000000000000000000000
.............GAGGATGTCATGGCCAAATATGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000010000000000000000000000000000000000000000000000000
............CGAGGATGTCATGGCCAAATATGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
TTGC---AT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTAA---------AGTACTG---CTTTTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------------------------------------------------CT-CTGCT---TGCAGGTATCATTGATGCTGGCGGTCGCAACGCCACGCTCTCGCTTCAATCTCGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCGCAACGCCACGCTCTCGCT..........2311.001100000
droGri2
CAAC---AAGCACGAGGATGTCATGGCCAAATATGGAGCTATTCTGGCTCAAGGTGAGTCCAAGATAT-TTAT------------------------------------------------------------------------------------------------------------------------------AGATGA----------------AGTATGCAAT---------------------------------TAT---------------------CTGTT---TTTCATTATTCA----------------AAT-----------------------TCAAAGATCTAAGATC-----ACTACA-------ACATTTGTTCTTACTGATAAA---------AATATCAACC--------------------------------------------------ATTTGTTTTGCACTTTTCATTAAATGTTGAT-TATTAATATATTG-TTTAATGTTT---GTTGTAATTTTATCACTTGTTTTATGAGCCTTAT----TTCATTT------------------CCAAAAACGTATTCATAAATTTACAATTC-------------TGAAAGCA-----------------TTTCTTG-------------TGAGAGTGATTCTATTATTTATCTCGCAACTGAATAATAACTGATTGATATTTAATAAAT------CT----TTA----ACT---TGCAGGCATCATCGATGCTGGCGGTCGCAATGCGACGCTCTCGCTGCAATCCCGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGCGGTCGCAATGCGACG..................2111.00110

Generated: 05/18/2015 at 07:21 PM