dsi_21945

CDS [x_9597971_9598033_+]; exon [x_9597971_9598113_+]; intron [x_9597640_9597970_+]

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## CCATCCTTTTTTGTTGATAACTGATATACTTTGTGCAAACATGTTTGCTCTTAACATATCGCTTACCCATTCGATATTTTCATGAGTACACTTTTGTTTGAGTTGCTTTTGCATTCCGTAAATCTTTGAAATATCTCTAAGTACTATTGTACCTTCTGAAGCTATCTAACCGACACTTACCACCGATCCTTTCTTTGCAGGCCAAGGCCCAGGCTGCCATTGCCGTGGAGGTCGCCGAAGCGTTAGTCAA ************************************************.......((((...........((((((((((.(((((.((((......))))))))).))................)))))))).....((((....))))...............................)))).............************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553486 Makindu_3 day-old ovaries	SRR618934 dsim w501 ovaries	SRR553485 Chicharo_3 day-old ovaries	M024 male body	M053 female body	M025 embryo	GSM343915 embryo	SRR553487 NRT_0-2 hours eggs
......................................................................................................................................................................................................................TGCCATTGCCGTGGAGGTCGCCGA............	24	0	1	6.00	6	3	0	3	0	0	0	0	0
......................................................................................................................................................................................................................TGCCATTGCCGTGGAGGTCGCCGAA...........	25	0	1	2.00	2	1	0	1	0	0	0	0	0
.......................................................................................................................................................................................................................GCCATTGCCGTGGAGGTCGCC..............	21	0	1	2.00	2	0	0	0	0	0	2	0	0
..................................................................................................................................................................................................................................GGAGGTCGCCGAAGCGTTA.....	19	0	1	2.00	2	0	0	0	0	1	0	1	0
............................................................................................................................................................................................................................TGCCGTGGAGGTCGCCGAAGCGTT......	24	0	1	1.00	1	0	1	0	0	0	0	0	0
.........................................................................................................................................................................................................CCAAGGCCCAGGCTGCCATTGCCGT........................	25	0	1	1.00	1	0	1	0	0	0	0	0	0
.............................................................................................................................................................................................................GGCCCAGGCTGCCATTGCCGTGGA.....................	24	0	1	1.00	1	0	0	0	0	1	0	0	0
...................................................................................................................................................................................................................................GAGGTCGCCGAAGCGTT......	17	0	1	1.00	1	0	1	0	0	0	0	0	0
..........................................................................................................................................................................................................CAAGGCCCAGGCTGCCATTGCCGTGGA.....................	27	0	1	1.00	1	1	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................ATTGCCGTGGAGGTCGCC..............	18	0	1	1.00	1	0	0	0	1	0	0	0	0
...........................................................................................................................................................................................................AAGGCCCAGGCTGCCATTGCCGTGGA.....................	26	0	1	1.00	1	1	0	0	0	0	0	0	0
......................................................................................................................................................................................................................TGCCATTGCCGTGGAGGT..................	18	0	1	1.00	1	0	1	0	0	0	0	0	0
......................................................................................................................................................................................................................TGCCATTGCCGTGGAGGTCGCCGAAGC.........	27	0	1	1.00	1	0	0	1	0	0	0	0	0
.....................................................................................................................................................................................................AAGGCCAAAGCCCAGGCTGCCATTGCCGT........................	29	2	1	1.00	1	0	1	0	0	0	0	0	0
.................................................................................................................................................................................................................CAGGCTGCCATTGCCGTGGAGGTCGCC..............	27	0	1	1.00	1	0	0	0	0	1	0	0	0
..........................................................................................................................................................................................................................ATTGCCGTGGAGGTCGCCGAAGCGTTA.....	27	0	1	1.00	1	0	0	0	1	0	0	0	0
......................................................................................................................................................................................................................TGCCATTGCCATGGAGGTCGCCGAA...........	25	1	1	1.00	1	1	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................GCCATTGCCGTGGAGGTCGCCGA............	23	0	1	1.00	1	1	0	0	0	0	0	0	0
..................................................................................................................................................................................................................AGGATGCCATTGCTGTGGA.....................	19	2	6	0.67	4	0	4	0	0	0	0	0	0
................................................................................................................ATTCCGTGAATCTTTGAAC.......................................................................................................................	19	2	2	0.50	1	0	0	0	1	0	0	0	0
...............................................................................................................................................................................................................ACCAGGATGCCATTGCTGTGGA.....................	22	3	3	0.33	1	0	1	0	0	0	0	0	0
.................................................................................................................TTCCGTGAATCTTTGAAC.......................................................................................................................	18	2	4	0.25	1	0	0	0	1	0	0	0	0
................................................................................................................ATTCCGTGAATCTTTGAACG......................................................................................................................	20	3	7	0.14	1	0	0	0	1	0	0	0	0
...............................................................................................................AATTCCGTGAATCTTTGAAC.......................................................................................................................	20	3	9	0.11	1	0	0	0	1	0	0	0	0
.........................................................................................................ATTTTGCATTCCGTAA.................................................................................................................................	16	1	12	0.08	1	0	0	0	0	0	0	0	1
..................................................................................................................................................................................................................AGGATGCCATTGCTGTGG......................	18	2	20	0.05	1	0	1	0	0	0	0	0	0
.................................................................................................................................................................................................................................TGGAGGACGCCCAAGCGGTA.....	20	3	20	0.05	1	1	0	0	0	0	0	0	0

GGTAGGAAAAAACAACTATTGACTATATGAAACACGTTTGTACAAACGAGAATTGTATAGCGAATGGGTAAGCTATAAAAGTACTCATGTGAAAACAAACTCAACGAAAACGTAAGGCATTTAGAAACTTTATAGAGATTCATGATAACATGGAAGACTTCGATAGATTGGCTGTGAATGGTGGCTAGGAAAGAAACGTCCGGTTCCGGGTCCGACGGTAACGGCACCTCCAGCGGCTTCGCAATCAGTT ************************************************.......((((...........((((((((((.(((((.((((......))))))))).))................)))))))).....((((....))))...............................)))).............************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR618934 dsim w501 ovaries	SRR553487 NRT_0-2 hours eggs	SRR902009 testis	M024 male body	SRR1275483 Male prepupae	SRR553488 RT_0-2 hours eggs
...................................................................................................................................................................................GGTGGCTAGGTGAGAAACG....................................................	19	2	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................................................TCCTACGGTAACGACACCTTCA..................	22	3	2	0.50	1	1	0	0	0	0	0
................................................................................................................................................................................................................GGTCCTACGGTAACGACA........................	18	2	15	0.20	3	3	0	0	0	0	0
.................................................................................................................................................................GAGTGATTGGCTGGGAAT.......................................................................	18	3	20	0.10	2	0	0	0	1	1	0
...................................................................GTAAGCTAAAAAAGTCCT.....................................................................................................................................................................	18	2	11	0.09	1	0	1	0	0	0	0
.......................................................................................................ACGAAAGCGTCAGGCAT..................................................................................................................................	17	2	11	0.09	1	0	0	1	0	0	0
.................................................................................................................................................................................................................................AGGCCCAGCGGCTTCGCA.......	18	3	20	0.05	1	0	0	0	0	0	1
......................................................................................................................................................AGGAAGGCTTCGATAG....................................................................................	16	2	20	0.05	1	1	0	0	0	0	0

Species	Coordinate	ID	Alignment
droSim2	x:9597771-9598020 +	dsi_21945	CCATC---CT---------------------------------TT-TTTGTT--GA--------TAAC-TGATATA----CTTTGTGCAAACATG----TTTGCTCTT----------AACAT---ATCGCTTACCCAT---------TCGATATTTTCATGAGTACA-----CTTTTGTTTGAGTTGCTTTTGCATT-CCGTAAATCTTTGAAAT-ATCTCTAAG-----------------------------TACTATTGTAC---------CT---TCT-GAAGCTAT------CTAACCGACACTTACCACCGATCCTT------TCTTTGCAGGCCAAGGCCCAGGCTGCCATTGCCGTGGAGGTCGCCGAAGCGTTAGTCAA
droSec2	scaffold_15:818516-818763 +		CCATC---CT---------------------------------TT-TTT------------------GTTGATATACTGCCTTTGTGCAAATATG----TTTGCTCTT----------AACAT---ATCGCTTACCCAT---------TCGATATTTTCATGAGTACA-----CTTTTGTTTGAGTTGCTTTTGCATT-CTGTAAATCTTTGAAAT-ACCTCTAAG-----------------------------TACTATTGCAC---------CT---TCT-GAAGCTAT------CTAACCGACACTTACCACCGATCCTTA-----CTTTTGCAGGCCAAGGCCCAGGCTGCCATTGCCGTGGAGGTCGCCGAAGCGTTAGTCAA
dm3	chrX:10107961-10108181 +		CCATC---CT---------------------------------TT-TTA------------------CTTGATATACTTTCTTTGTACAAACAAG----TTTGCTCTT----------AAATT---AACGCTTACACAT---------TCGATATTTCCATGAGTAAA-----CTTATGTTTGAGTTGCTTTTGCATT-CTG--------------------------------------------------------TATTGCAC---------AT---TCT-GAAGCTAT------CTAAACGAGACTTAACCACGATCCTT------GTTTTGCAGGCCAAGGCCCAGGCTGCCATTGCCGTGGAGGTCGCCGAAGCGTTAGTCAA
droEre2	scaffold_4690:5014471-5014729 -		CCATC---AC---------------------------------TT-TTA------------------CTTGAGTTATTACCTTCGTGCT-ACTTG----TTTGCTCTT----------AAATT---ATCGCCTATCTATAATATCTGTACGATATTTTCATGGGAAAA-----CTTTTGTTTGAGTTACATTT--------------------------CTCTTGATAGAATCCAGAAA-CCCAACTACAAACACTACAATTGCAC---------TT---TCT-GAAGATAT------CCAACCGAGACTTACCTCCGATCCTT------GTTTTGCAGGCCAAGGCCCAGGCTGCCATCGCCGTGGAGGTCGCCGAAGCGTTAGTCAA
droYak3	X:18686128-18686393 +		TTGA------------------------------------------TTA------------------CTTGAGATATTACTTTCATGCT-ACATT----CTTGCTCTT----------ATGTT---ACCACCTATCTAT---------ATGATATTTGCAAGAGTAAT-----CTTTTGTTTGAGTTGCTTTTACACT-CCGAA-----GTGAACT-ATCACTTGGTAGAAACCAGAGTTCCTAACTACAAACACTACTATTGTAC---------CT---TTTGGAAGATGT------CCAATTGAAACTTACTTGCGATCCTT------GTTTTGCAGGCCAAGGCCCAGGCTGCCATCGCCGTGGAGGTCGCCGAAGCGTTAGTGAA
droEug1	scf7180000409509:768074-768159 -		T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAACTAAACCTTAATCACTATCCTT------CTCTTGCAGGCCAAGGCAGAGGCTGCCATCGCCGTTGAGGTCGCCGAGGCGTTAGTTAA
droBia1	scf7180000302187:1281187-1281255 -		CA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAATCCCT-------GTTTGCAGGCCAAGGCCCAGGCTGCCATCGCGGTGGAGGTCGCCGAAGCGTTAGTCAA
droTak1	scf7180000415872:785603-785727 +		AAATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTATAGTTACATTT------------------------------------------------------------------ATAGTAC---------CT---TAA-AACAATTT------CTAACTACATCTTCACTCCGATCCTT------GTCTTACAGGCCAAGGCAAAGGCTGCCATCGCCGTGGAGGTCGCCGAGGCGTTAGTCAA
droEle1	scf7180000491013:1055677-1055738 +		C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT------GTTTTACAGGCCAAGGCACAGGCTGCCATCGCCGTGGAGGTCGCCGAAGCGTTAGTAAA
droRho1	scf7180000779333:78826-78925 +		TA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---------TT---TAA-AACGATAT------CTAACTGAAACCTTATCCCGATCC-T------GTTTTGCAGGCCAAGGCCCAGGCTGCCATCGCCGTGGAGGTCGCCGAAGCGTTAGTTAA
droFic1	scf7180000454073:3039153-3039434 +		TCACA---AA------------------------------CATTA-TTTGTCCGGTTATCAAATGAAT-TGATACG-------------ATTTGGTTCAGTTGCTCTATTTAATTCATAACAAACAAATGCTT-TGCAT---------CCGTAATCAAAATAAGTAAAGACCTTTTTTGTTTTGGTGGCTATAAAAATATAGTAAAT---TGTAATAAGCTCT-AG-----------------------------TAGAACAGGAACTTAAGTACTG---AGA-ATTGATTA------CCAACTTTTTATTTATCCTGTTCCTT------GTTTTTCAGGCCAAGGCCCAGGCTGCCATTGCCGTGGAGGTCGCCGAAGCGTTAGTTAA
droKik1	scf7180000302592:136916-136982 -		ATCCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT------ACCTTCCAGGCCAAGGCCCAGGCTGCCATTGCCGTGGAGGTCGCCGAGGCGTTAGTCAA
droAna3	scaffold_13047:912063-912212 +		TACTTTTAAATACCATTTGTGAAAAAGTTCTTAGCTTTACGG--AGTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---------TTGTTC----AAAATAC------CAGACCATAACTAATGTAATGTCCTTATTCC-TCTTTGCAGGCCAAGGCTGAGGCTGCCATCGCCGTGGAAGTCGCCGAGGCGTTAGTCAA
droBip1	scf7180000396431:695501-695613 +		CTTAT-----------------------------------GA--AGCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---------TT---CAA----AATGTCAGATTCTAACTAATGTTATA------TCCTTATTTCCCTCTTGCAGGCCAAGGCTGAGGCTGCCATCGCCGTGGAAGTCGCCGAGGCGTTAGTCAA
dp5	Unknown_singleton_3693:281-361 +		ACTCT-----------------------------------CATCA-CTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCAAT--TT------CCGTTGCAGGCCAAGGCAGAAGCTGCCATTGCCGTCGAAGTCGCTGAGGCGTTAGTCAA
droPer2	scaffold_13:1977343-1977423 -		ACTCT-----------------------------------CATCA-CTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCAAT--TT------CCGTTGCAGGCCAAGGCAGAAGCTGCCATTGCCGTCGAAGTCGCTGAGGCGTTAGTCAA
droWil2	scf2_1100000004909:10368312-10368379 -		CTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTTG-----TTCCCACAGGCCAAGGCGGAGGCTGCCATCGCCGTTGAAGTTGCTGAGGCACTGGTCAA
droVir3	scaffold_12970:8253029-8253090 +		CT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C------TTGTTGCAGGCCAAGGCAGAAGCTGCCATTGCCGTCGAAGTTGCTGAAGCGCTTGTCAA
droMoj3	scaffold_6482:1168775-1168852 -		ACAAC-----------------------------------TA--A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTCATTC------GCATTGCAGGCCAAGGCAGAAGCTGCCATTGCCGTGGAAGTTGCTGAAGCGCTAGTCAA
droGri2	scaffold_14853:497497-497551 -		----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAGGCAAAGGCGGAAGCTGCCATCGCTGTGGAAGTTGCTGAAGCGCTCGTCAA

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

CCATC---CT---------------------------------TT-TTTGTT--GA--------TAAC-TGATATA----CTTTGTGCAAACATG----TTTGCTCTT----------AACAT---ATCGCTTACCCAT---------TCGATATTTTCATGAGTACA-----CTTTTGTTTGAGTTGCTTTTGCATT-CCGTAAATCTTTGAAAT-ATCTCTAAG-----------------------------TACTATTGTAC---------CT---TCT-GAAGCTAT------CTAACCGACACTTACCACCGATCCTT------TCTTTGCAGGCCAAGGCCCAGGCTGCCATTGCCGTGGAGGTCGCCGAAGCGTTAGTCAA	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.................................................................................................................................................................................................................................................................................................................................................................TGCCATTGCCGTGGAGGTCGCCGA............	24	1	6.00	6	0	0	0	0	0	0	3	3	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................TGCCATTGCCGTGGAGGTCGCCGAA...........	25	1	2.00	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................GCCATTGCCGTGGAGGTCGCC..............	21	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................GGAGGTCGCCGAAGCGTTA.....	19	1	2.00	2	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................TGCCGTGGAGGTCGCCGAAGCGTT......	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................CCAAGGCCCAGGCTGCCATTGCCGT........................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................GGCCCAGGCTGCCATTGCCGTGGA.....................	24	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................GAGGTCGCCGAAGCGTT......	17	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................CAAGGCCCAGGCTGCCATTGCCGTGGA.....................	27	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................ATTGCCGTGGAGGTCGCC..............	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................AAGGCCCAGGCTGCCATTGCCGTGGA.....................	26	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................TGCCATTGCCGTGGAGGT..................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................TGCCATTGCCGTGGAGGTCGCCGAAGC.........	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................CAGGCTGCCATTGCCGTGGAGGTCGCC..............	27	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................ATTGCCGTGGAGGTCGCCGAAGCGTTA.....	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................GCCATTGCCGTGGAGGTCGCCGA............	23	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0

droSec2

CCATC---CT---------------------------------TT-TTT------------------GTTGATATACTGCCTTTGTGCAAATATG----TTTGCTCTT----------AACAT---ATCGCTTACCCAT---------TCGATATTTTCATGAGTACA-----CTTTTGTTTGAGTTGCTTTTGCATT-CTGTAAATCTTTGAAAT-ACCTCTAAG-----------------------------TACTATTGCAC---------CT---TCT-GAAGCTAT------CTAACCGACACTTACCACCGATCCTTA-----CTTTTGCAGGCCAAGGCCCAGGCTGCCATTGCCGTGGAGGTCGCCGAAGCGTTAGTCAA	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
.............................................................................................................................................................................................................................................................................................................................................................................GGAGGTCGCCGAAGCGTTA.....	19	1	5.00	5	0	0	5	0
.......................................................................................................................................................................................................................................................................................................................................................................TGCCGTGGAGGTCGCCGAAGC.........	21	1	3.00	3	1	2	0	0
............................................................................................................................................................................................................................................................................................................................................................................TGGAGGTCGCCGAAGCGTTAGTCA.	24	1	2.00	2	0	1	0	1
.....................................................................................................................................................................................................................................................................................................................................................................ATTGCCGTGGAGGTCGCC..............	18	1	2.00	2	0	0	2	0
...................................................................................................................................................................................................................................................................................................................................................................CCATTGCCGTGGAGGTCGCC..............	20	1	1.00	1	0	1	0	0
......................................................................................................................................................................................................................................................................................................................................................................TTGCCGTGGAGGTCGCCGA............	19	1	1.00	1	0	0	1	0
.......................................................................................................................................................................................................................................................................................................................................................AGGCCCAGGCTGCCATTGCCGT........................	22	1	1.00	1	0	0	1	0
......................................................................................................................................................................................................................................................................................................................................................AAGGCCCAGGCTGCCATTGCCGTGGAGGTC.................	30	1	1.00	1	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................................................GCCATTGCCGTGGAGGTCGCC..............	21	1	1.00	1	0	1	0	0
....................................................................................................................................................................................................................................................................................................................................................................CATTGCCGTGGAGGTCGCCGAAGC.........	24	1	1.00	1	0	0	0	1
......................................................................................................................................................................................................................................................................................................................................................AAGGCCCAGGCTGCCATTGCCGTGGAGGT..................	29	1	1.00	1	0	0	1	0
....................................................................................................................................................................................................................................................................................................................................................................CATTGCCGTGGAGGTCGC...............	18	1	1.00	1	0	0	1	0
............................................................................................................................................................................................................................................................................................................................................................CAGGCTGCCATTGCCGTGGAGGTCGC...............	26	1	1.00	1	0	1	0	0
................................................................................................................................................................................................................................................................................................................................................................CTGCCATTGCCGTGGAGGTCG................	21	1	1.00	1	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................GTGGAGGTCGCCGAAGCGTTAGT...	23	1	1.00	1	0	0	1	0
.........................................................................................................................................................................................................................................................................................................................................................................CCGTGGAGGTCGCCGAAGC.........	19	1	1.00	1	0	0	1	0
................................................................................................................................................................................................................................................................................................................................................................CTGCCATTGCCGTGGAGGT..................	19	1	1.00	1	0	0	1	0
.............................................................................................................................................................................................................................................................................................................................................................AGGCTGCCATTGCCGTGGAGGT..................	22	1	1.00	1	0	0	1	0
.................................................................................................................................................................................................................................................................................................................................................................TGCCATTGCCGTGGAGGTCGC...............	21	1	1.00	1	0	0	1	0
.......................................................................................................................................................................................................................................................................................................................................................................TGCCGTGGAGGTCGCCGA............	18	1	1.00	1	1	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................GGTCGCCGAAGCGTTAGTCAA	21	1	1.00	1	1	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................ATTGCCGTGGAGGTCGCCGAAGCGTTA.....	27	1	1.00	1	0	1	0	0

dm3

CCATC---CT---------------------------------TT-TTA------------------CTTGATATACTTTCTTTGTACAAACAAG----TTTGCTCTT----------AAATT---AACGCTTACACAT---------TCGATATTTCCATGAGTAAA-----CTTATGTTTGAGTTGCTTTTGCATT-CTG--------------------------------------------------------TATTGCAC---------AT---TCT-GAAGCTAT------CTAAACGAGACTTAACCACGATCCTT------GTTTTGCAGGCCAAGGCCCAGGCTGCCATTGCCGTGGAGGTCGCCGAAGCGTTAGTCAA	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.................................................................................................................................................................................................................................................................................................................................................AGGCCAAGGCCCAGGCTGCCA...............................	21	1	15.00	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	5	0	0	0	0	0	0	0	3	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................AGGCCAAGGCCCAGGCTGCC................................	20	1	13.00	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................GGAGGTCGCCGAAGCGTT......	18	1	9.00	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................TGCCGTGGAGGTCGCCGA............	18	1	8.00	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................GGCCCAGGCTGCCATTGCCGTGGAG....................	25	1	8.00	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................TTGCCGTGGAGGTCGCCG.............	18	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................GGAGGTCGCCGAAGCGTTA.....	19	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................TGGAGGTCGCCGAAGCGTTAGTCA.	24	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
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..........................................................................................................................................................................................................................................................................................................................................................................CGTGGAGGTCGCCGAAGCGTTAG....	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................CCGTGGAGGTCGCCGAAGCGTTA.....	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................AGGCTGCCATTGCCGTGGAG....................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................GGCCCAGGCTGCCATTGCCGTGG......................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................CGTGGAGGTCGCCGAAGCGTTA.....	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................AGGCCCAGGCTGCCATTGCCGTGGAGGT..................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................CACGATCCTT------GTTTTGCAG..................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................CAAGGCCCAGGCTGCCATTGC...........................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

CCATC---AC---------------------------------TT-TTA------------------CTTGAGTTATTACCTTCGTGCT-ACTTG----TTTGCTCTT----------AAATT---ATCGCCTATCTATAATATCTGTACGATATTTTCATGGGAAAA-----CTTTTGTTTGAGTTACATTT--------------------------CTCTTGATAGAATCCAGAAA-CCCAACTACAAACACTACAATTGCAC---------TT---TCT-GAAGATAT------CCAACCGAGACTTACCTCCGATCCTT------GTTTTGCAGGCCAAGGCCCAGGCTGCCATCGCCGTGGAGGTCGCCGAAGCGTTAGTCAA	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
........................................................................................................................................................................................................................................................................................................................................................GGCCCAGGCTGCCATCGCCGTGGAGGT..................	27	1	6.00	6	0	1	0	0	0	0	5
.............................................................................................................................................................................................................................................................................................................................................................................GGAGGTCGCCGAAGCGTTA.....	19	1	3.00	3	0	0	0	0	3	0	0
...........................................................................................................................................................................................................................................................................................................................................................................GTGGAGGTCGCCGAAGCGTTA.....	21	1	2.00	2	0	0	0	0	2	0	0
.......................................................................................................................................................................................................................................................................................................................................................................CGCCGTGGAGGTCGCCGAAGC.........	21	1	2.00	2	0	1	0	0	0	1	0
.............................................................................................................................................................................................................................................................................................................................................................AGGCTGCCATCGCCGTGGAGGT..................	22	1	2.00	2	0	0	0	0	2	0	0
..........................................................................................................................................................................................................................................................................................................................................................................CGTGGAGGTCGCCGAAGC.........	18	1	2.00	2	0	0	0	0	0	2	0
..................................................................................................................................................................................................................................................................................................................................................................GCCATCGCCGTGGAGGTC.................	18	1	1.00	1	1	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................AGGCCCAGGCTGCCATCGCCGTGGAGG...................	27	1	1.00	1	1	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................TGCCATCGCCGTGGAGGTCGCC..............	22	1	1.00	1	1	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................GGCCAAGGCCCAGGCTGCCATCG............................	23	1	1.00	1	1	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................AGGCTGCCATCGCCGTGGAGGTCGCCG.............	27	1	1.00	1	1	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................GGCTGCCATCGCCGTGGAGGT..................	21	1	1.00	1	0	0	0	1	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................GCTGCCATCGCCGTGGAGGTCGCC..............	24	1	1.00	1	0	0	0	0	1	0	0
......................................................................................................................................................................................................................................................................................................................................................................TCGCCGTGGAGGTCGCCGAAGC.........	22	1	1.00	1	0	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................TGCCATCGCCGTGGAGGT..................	18	1	1.00	1	1	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................TGCCATCGCCGTGGAGGTCGC...............	21	1	1.00	1	0	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................GCCATCGCCGTGGAGGTCGCC..............	21	1	1.00	1	1	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................AAGGCCCAGGCTGCCATCGCCGTGGA.....................	26	1	1.00	1	1	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................AGGCTGCCATCGCCGTGGA.....................	19	1	1.00	1	1	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................GGCCAAGGCCCAGGCTGCCATCGC...........................	24	1	1.00	1	1	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................GGAGGTCGCCGAAGCGTTAGTC..	22	1	1.00	1	0	0	0	0	0	1	0
............................................................................................................................................................................................................................................................................................................................................................CAGGCTGCCATCGCCGTGGAGGTCGCC..............	27	1	1.00	1	0	0	0	0	1	0	0
....................................................................................................................................................................................................................................................................................................................................................................CATCGCCGTGGAGGTCGC...............	18	1	1.00	1	0	0	0	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................................................GCCATCGCCGTGGAGGTCGCCGAAG..........	25	1	1.00	1	0	0	0	0	1	0	0
.................................................................................................................................................................................................................................................................................................................................................................TGCCATCGCCGTGGAGGTC.................	19	1	1.00	1	1	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................CCATCGCCGTGGAGGTCGCCGAAGC.........	25	1	1.00	1	1	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................AAGGCCCAGGCTGCCATCGCCG.........................	22	1	1.00	1	1	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................GTGGAGGTCGCCGAAGCGTTAGTCA.	25	1	1.00	1	0	0	0	0	1	0	0
...........................................................................................................................................................................................................................................................................................................................................................CCAGGCTGCCATCGCCGTGGAGGTC.................	25	1	1.00	1	0	0	0	0	1	0	0
........................................................................................................................................................................................................................................................................................................................................................GGCCCAGGCTGCCATCGCCGTGG......................	23	1	1.00	1	1	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................TGCCATCGCCGTGGAGGTCGCCGAAGC.........	27	1	1.00	1	1	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................GCCCAGGCTGCCATCGCCG.........................	19	1	1.00	1	1	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................TGCCATCGCCGTGGAGGTCGCCGAA...........	25	1	1.00	1	0	0	0	0	0	0	1
..............................................................................................................................................................................................................................................................................................................................................................................GAGGTCGCCGAAGCGTTA.....	18	1	1.00	1	0	0	0	0	1	0	0

droYak3

TTGA------------------------------------------TTA------------------CTTGAGATATTACTTTCATGCT-ACATT----CTTGCTCTT----------ATGTT---ACCACCTATCTAT---------ATGATATTTGCAAGAGTAAT-----CTTTTGTTTGAGTTGCTTTTACACT-CCGAA-----GTGAACT-ATCACTTGGTAGAAACCAGAGTTCCTAACTACAAACACTACTATTGTAC---------CT---TTTGGAAGATGT------CCAATTGAAACTTACTTGCGATCCTT------GTTTTGCAGGCCAAGGCCCAGGCTGCCATCGCCGTGGAGGTCGCCGAAGCGTTAGTGAA	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................CGCCGTGGAGGTCGCCGAAGC.........	21	1	3.00	3	0	0	2	1	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................CATCGCCGTGGAGGTCGCCGAAGC.........	24	1	3.00	3	0	1	1	0	0	0	1	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................GCCATCGCCGTGGAGGTCGC...............	20	1	2.00	2	0	0	1	0	1	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................GCCATCGCCGTGGAGGTCGCC..............	21	1	2.00	2	0	0	0	0	0	1	1	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................TCGCCGTGGAGGTCGCCGAAG..........	21	1	2.00	2	0	1	0	0	0	0	1	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................TGCCATCGCCGTGGAGGTCGC...............	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................ATCGCCGTGGAGGTCGCC..............	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................AGGTCGCCGAAGCGTTAGT...	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................GGAGGTCGCCGAAGCGTTAGT...	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................TGCCATCGCCGTGGAGGTC.................	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................TCGCCGTGGAGGTCGCCGAAGCG........	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................ATCGCCGTGGAGGTCGCCGAAGC.........	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................GCCAAGGCCCAGGCTGCCATCGCCG.........................	25	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0
.....................................................................................................................................................................................TGAGTTGCTTTTACACT-CCGAA-----GT..................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................GGCTGCCATCGCCGTGGAGGTC.................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................TGCCATCGCCGTGGAGGTCGCCGAAGC.........	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................CATCGCCGTGGAGGTCGCC..............	19	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................CCAGGCTGCCATCGCCGTGGAGGTCGC...............	27	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................GGCCAAGGCCCAGGCTGCCATCGC...........................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................CAAGGCCCAGGCTGCCATCGCCGTGGAGGT..................	30	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................GGCTGCCATCGCCGTGGAGGTCGCC..............	25	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................GTGGAGGTCGCCGAAGCGTTAGT...	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................GGCTGCCATCGCCGTGGAGGT..................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................GTCGCCGAAGCGTTAGTGAA	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................AGGCTGCCATCGCCGTGGAGGT..................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................TCGCCGTGGAGGTCGCCGAAGC.........	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................AGGCTGCCATCGCCGTGGAGG...................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0

droEug1

T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAACTAAACCTTAATCACTATCCTT------CTCTTGCAGGCCAAGGCAGAGGCTGCCATCGCCGTTGAGGTCGCCGAGGCGTTAGTTAA	Size	Hit Count	Total Norm	Total
No Reads

droBia1

CA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAATCCCT-------GTTTGCAGGCCAAGGCCCAGGCTGCCATCGCGGTGGAGGTCGCCGAAGCGTTAGTCAA	Size	Hit Count	Total Norm	Total
No Reads

droTak1

AAATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTATAGTTACATTT------------------------------------------------------------------ATAGTAC---------CT---TAA-AACAATTT------CTAACTACATCTTCACTCCGATCCTT------GTCTTACAGGCCAAGGCAAAGGCTGCCATCGCCGTGGAGGTCGCCGAGGCGTTAGTCAA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT------GTTTTACAGGCCAAGGCACAGGCTGCCATCGCCGTGGAGGTCGCCGAAGCGTTAGTAAA	Size	Hit Count	Total Norm	Total
No Reads

droRho1

TA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---------TT---TAA-AACGATAT------CTAACTGAAACCTTATCCCGATCC-T------GTTTTGCAGGCCAAGGCCCAGGCTGCCATCGCCGTGGAGGTCGCCGAAGCGTTAGTTAA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

TCACA---AA------------------------------CATTA-TTTGTCCGGTTATCAAATGAAT-TGATACG-------------ATTTGGTTCAGTTGCTCTATTTAATTCATAACAAACAAATGCTT-TGCAT---------CCGTAATCAAAATAAGTAAAGACCTTTTTTGTTTTGGTGGCTATAAAAATATAGTAAAT---TGTAATAAGCTCT-AG-----------------------------TAGAACAGGAACTTAAGTACTG---AGA-ATTGATTA------CCAACTTTTTATTTATCCTGTTCCTT------GTTTTTCAGGCCAAGGCCCAGGCTGCCATTGCCGTGGAGGTCGCCGAAGCGTTAGTTAA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

ATCCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT------ACCTTCCAGGCCAAGGCCCAGGCTGCCATTGCCGTGGAGGTCGCCGAGGCGTTAGTCAA	Size	Hit Count	Total Norm	Total
No Reads

droAna3

TACTTTTAAATACCATTTGTGAAAAAGTTCTTAGCTTTACGG--AGTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---------TTGTTC----AAAATAC------CAGACCATAACTAATGTAATGTCCTTATTCC-TCTTTGCAGGCCAAGGCTGAGGCTGCCATCGCCGTGGAAGTCGCCGAGGCGTTAGTCAA	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
..........................................................................................................................................................................................................................................................................................................................................................CTGAGGCTGCCATCGCCGTGG......................	21	1	2.00	2	0	0	0	0	0	2
....................................................................................................................................................................................................................................................................................................................................................CCAAGGCTGAGGCTGCCATCGCCGTG.......................	26	1	2.00	2	2	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................CAAGGCTGAGGCTGCCATCGCCGTGGAA....................	28	1	2.00	2	2	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................GCCGTGGAAGTCGCCGAGGC.........	20	1	2.00	2	1	0	0	0	0	1
...........................................................................................................................................................................................................................................................................................................................................................TGAGGCTGCCATCGCCGTGGAAGT..................	24	1	1.00	1	0	1	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................GCTGAGGCTGCCATCGCCGTGG......................	22	1	1.00	1	0	0	1	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................GAAGTCGCCGAGGCGTTAGT...	20	1	1.00	1	0	0	0	0	1	0
....................................................................................................................................................................................................................................................................................................................................................................CATCGCCGTGGAAGTCGCCGA............	21	1	1.00	1	0	0	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................GTGGAAGTCGCCGAGGCGTTAGTCA.	25	1	1.00	1	0	0	0	0	0	1
.................................................................................................................................................................................................................................................................................................................................................................TGCCATCGCCGTGGAAGTCGCCG.............	23	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................ATCGCCGTGGAAGTCGCCGAGGC.........	23	1	1.00	1	0	1	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................GGCTGAGGCTGCCATCGCCGTGGAAGTC.................	28	1	1.00	1	0	1	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................GCTGAGGCTGCCATCGCCGTGGAA....................	24	1	1.00	1	0	0	0	0	0	1
.................................................................................................................................................................................................................................................................................................................................................AGGCCAAGGCTGAGGCTGCCATCGCCG.........................	27	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................CAAGGCTGAGGCTGCCATCGCCGTGGA.....................	27	1	1.00	1	0	1	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................ATCGCCGTGGAAGTCGCCGA............	20	1	1.00	1	0	1	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................GTGGAAGTCGCCGAGGCGTT......	20	1	1.00	1	0	0	0	0	0	1
..............................................................................................................................................................................................................................................................................................................................................................GGCTGCCATCGCCGTGGAAG...................	20	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................CTGAGGCTGCCATCGCCGTGGA.....................	22	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................AAGGCTGAGGCTGCCATCGCCGTGGA.....................	26	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................AGGCTGCCATCGCCGTGGAAGTCGCC..............	26	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................GCCGTGGAAGTCGCCGAGG..........	19	1	1.00	1	0	0	0	1	0	0
.........................................................................................................................................................................................................................................................................................................................................................GCTGAGGCTGCCATCGCCGTGGAAGT..................	26	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................TGAGGCTGCCATCGCCGTGGA.....................	21	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................GAGGCTGCCATCGCCGTGGAAGTCGCCG.............	28	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................GGCTGAGGCTGCCATCGCCGTGGA.....................	24	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................AAGGCTGAGGCTGCCATCGC...........................	20	1	1.00	1	0	0	0	1	0	0
.........................................................................................................................................................................................................................................................................................................................................................GCTGAGGCTGCCATCGCCGTG.......................	21	1	1.00	1	0	1	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................GGCCAAGGCTGAGGCTGCCATC.............................	22	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................GAGGCTGCCATCGCCGTGGAA....................	21	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................GCCAAGGCTGAGGCTGCCATCGCC..........................	24	1	1.00	1	0	1	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................GCCATCGCCGTGGAAGTCGCC..............	21	1	1.00	1	0	0	0	0	1	0
.........................................................................................................................................................................................................................................................................................................................................................GCTGAGGCTGCCATCGCCG.........................	19	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................ATCGCCGTGGAAGTCGCCGAGGCG........	24	1	1.00	1	0	0	0	0	0	1
..............................................................................................................................................................................................................................................................................................................................................................GGCTGCCATCGCCGTGGAAGTCGC...............	24	1	1.00	1	0	0	0	0	1	0
...............................................................................................................................................................................................................................................................................................................................................................GCTGCCATCGCCGTGGAAGTCGCC..............	24	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................CGCCGTGGAAGTCGCCGAG...........	19	1	1.00	1	0	0	0	0	0	1
.......................................................................................................................................................................................................................................................................................................................................................AGGCTGAGGCTGCCATCGCCGTGGAAG...................	27	1	1.00	1	0	0	0	0	0	1
....................................................................................................................................................................................................................................................................................................................................................................CATCGCCGTGGAAGTCGCCGAGG..........	23	1	1.00	1	0	0	0	0	1	0
.............................................................................................................................................................................................................................................................................................................................................................AGGCTGCCATCGCCGTGGA.....................	19	1	1.00	1	1	0	0	0	0	0

droBip1

CTTAT-----------------------------------GA--AGCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---------TT---CAA----AATGTCAGATTCTAACTAATGTTATA------TCCTTATTTCCCTCTTGCAGGCCAAGGCTGAGGCTGCCATCGCCGTGGAAGTCGCCGAGGCGTTAGTCAA	Size	Hit Count	Total Norm	Total
No Reads

dp5

ACTCT-----------------------------------CATCA-CTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCAAT--TT------CCGTTGCAGGCCAAGGCAGAAGCTGCCATTGCCGTCGAAGTCGCTGAGGCGTTAGTCAA	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
...........................................................................................................................................................................................................................................................................................................................................................AGAAGCTGCCATTGCCGTCGAAGT..................	24	2	2.00	4	0	3	1	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................AGGCCAAGGCAGAAGCTGCCA...............................	21	2	1.50	3	0	0	0	2	0	1	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................AGAAGCTGCCATTGCCGTCGAAGTC.................	25	2	1.50	3	0	3	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................GTCGAAGTCGCTGAGGCGTT......	20	2	1.50	3	0	3	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................TGCCATTGCCGTCGAAGTCGCTGAGG..........	26	2	1.00	2	0	0	0	0	0	0	0	0	2	0
...........................................................................................................................................................................................................................................................................................................................................................AGAAGCTGCCATTGCCGTC.......................	19	2	1.00	2	0	1	0	0	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................AGGCAGAAGCTGCCATTGCCGTCGAAG...................	27	2	1.00	2	0	2	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................GAAGCTGCCATTGCCGTCGAAGT..................	23	2	1.00	2	0	2	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................CATTGCCGTCGAAGTCGCTGAGGC.........	24	2	1.00	2	0	2	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................GAAGCTGCCATTGCCGTCGAAGTC.................	24	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................TGCCGTCGAAGTCGCTGAGGCGT.......	23	2	1.00	2	0	0	0	0	0	2	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................GCCATTGCCGTCGAAGTCGCTGAGG..........	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................TGCCATTGCCGTCGAAGTCGCTGAGGC.........	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................CATTGCCGTCGAAGTCGCTGAGGCGTT......	27	2	0.50	1	0	0	0	0	0	0	1	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................CGTCGAAGTCGCTGAGGCGTT......	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................CCATTGCCGTCGAAGTCGCTGAGGC.........	25	2	0.50	1	0	0	1	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................TGCCATTGCCGTCGAAGTCGCTGAG...........	25	2	0.50	1	0	0	0	0	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................GCTGCCATTGCCGTCGAA....................	18	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................CCATTGCCGTCGAAGTCGCTGAG...........	23	2	0.50	1	0	0	0	0	0	1	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................AGCTGCCATTGCCGTCGAAG...................	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................TGCCGTCGAAGTCGCTGAGGCGTTA.....	25	2	0.50	1	0	0	0	0	0	1	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................AGGCCAAGGCAGAAGCTGC.................................	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................TGCCGTCGAAGTCGCTGAGG..........	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................TGCCGTCGAAGTCGCTGAGGC.........	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................TTGCCGTCGAAGTCGCTGAGGCGTT......	25	2	0.50	1	0	0	0	0	0	0	1	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................TCGAAGTCGCTGAGGCGTT......	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................AGGCAGAAGCTGCCATTGCCGTCG......................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................CAGAAGCTGCCATTGCCGTCGAA....................	23	2	0.50	1	0	0	0	0	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................TTGCCGTCGAAGTCGCTGAGG..........	21	2	0.50	1	0	0	0	0	0	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................AAGTCGCTGAGGCGTTAGTC..	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................CGAAGTCGCTGAGGCGTTAGT...	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................GAAGCTGCCATTGCCGTCGA.....................	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................GCCATTGCCGTCGAAGTCGCTGAG...........	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................TTGCCGTCGAAGTCGCTGAG...........	20	2	0.50	1	0	0	0	0	0	1	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................AGAAGCTGCCATTGCCGTCGAAGTCGC...............	27	2	0.50	1	0	0	0	1	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................GCCGTCGAAGTCGCTGAG...........	18	2	0.50	1	0	0	0	1	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................AGGCCAAGGCAGAAGCTGCC................................	20	2	0.50	1	0	0	0	0	0	1	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................GGCCAAGGCAGAAGCTGCC................................	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................GCAGAAGCTGCCATTGCCGTCGAAGT..................	26	2	0.50	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................GAAGCTGCCATTGCCGTCGAAGTCGCT..............	27	2	0.50	1	0	0	0	1	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................AGAAGCTGCCATTGCCGTCGA.....................	21	2	0.50	1	0	0	1	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................CAGAAGCTGCCATTGCCGTC.......................	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................TGCCGTCGAAGTCGCTGAGGCGTT......	24	2	0.50	1	0	0	0	0	0	0	1	0	0	0

droPer2

ACTCT-----------------------------------CATCA-CTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCAAT--TT------CCGTTGCAGGCCAAGGCAGAAGCTGCCATTGCCGTCGAAGTCGCTGAGGCGTTAGTCAA	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
...........................................................................................................................................................................................................................................................................................................................................................AGAAGCTGCCATTGCCGTCGAAGTC.................	25	1	4.00	4	3	0	0	0	0	1
........................................................................................................................................................................................................................................................................................................................................................................GCCGTCGAAGTCGCTGAGGC.........	20	1	3.00	3	0	0	1	0	0	2
....................................................................................................................................................................................................................................................................................................................................................................CATTGCCGTCGAAGTCGCTGAGGC.........	24	1	3.00	3	3	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................GAAGCTGCCATTGCCGTCG......................	19	1	2.00	2	0	1	0	0	0	1
...............................................................................................................................................................................................................................................................................................................................................................GCTGCCATTGCCGTCGAAGTC.................	21	1	2.00	2	0	0	0	0	0	2
...........................................................................................................................................................................................................................................................................................................................................................AGAAGCTGCCATTGCCGTCGAAGTCG................	26	1	2.00	2	2	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................ATTGCCGTCGAAGTCGCTGAGG..........	22	1	2.00	2	1	1	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................TGCCGTCGAAGTCGCTGA............	18	1	2.00	2	2	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................GCTGCCATTGCCGTCGAAGTCGCTGA............	26	1	1.00	1	0	0	0	0	0	1
.....................................................................................................................................................................................................................................................................................................................................................................ATTGCCGTCGAAGTCGCTGA............	20	1	1.00	1	0	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................AGAAGCTGCCATTGCCGTCGAA....................	22	1	1.00	1	0	1	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................CGTCGAAGTCGCTGAGGC.........	18	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................GCTGCCATTGCCGTCGAAGTCGCTGAG...........	27	1	1.00	1	0	0	0	0	0	1
.......................................................................................................................................................................................................................................................................................................................................................AGGCAGAAGCTGCCATTGCCGTC.......................	23	1	1.00	1	0	1	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................CATTGCCGTCGAAGTCGCTGAG...........	22	1	1.00	1	0	0	0	1	0	0
...........................................................................................................................................................................................................................................................................................................................................................................GTCGAAGTCGCTGAGGCGTT......	20	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................ATTGCCGTCGAAGTCGCTGAGGC.........	23	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................TTGCCGTCGAAGTCGCTGAGG..........	21	1	1.00	1	0	0	0	0	0	1
....................................................................................................................................................................................................................................................................................................................................................................CATTGCCGTCGAAGTCGC...............	18	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................TGCCGTCGAAGTCGCTGG............	18	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................TGCCATTGCCGTCGAAGTC.................	19	1	1.00	1	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................CCGTCGAAGTCGCTGAGGC.........	19	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................GCCATTGCCGTCGAAGTC.................	18	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................GCTGCCATTGCCGTCGAAG...................	19	1	1.00	1	0	1	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................CCATTGCCGTCGAAGTCGCTG.............	21	1	1.00	1	1	0	0	0	0	0

droWil2

CTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTTG-----TTCCCACAGGCCAAGGCGGAGGCTGCCATCGCCGTTGAAGTTGCTGAGGCACTGGTCAA	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
...........................................................................................................................................................................................................................................................................................................................................................................GTTGAAGTTGCTGAGGCACT......	20	1	3.00	3	0	0	0	3	0
.................................................................................................................................................................................................................................................................................................................................................AGGCCAAGGCGGAGGCTGCCATCGCC..........................	26	1	2.00	2	0	0	0	0	2
..........................................................................................................................................................................................................................................................................................................................................................................CGTTGAAGTTGCTGAGGCACTGGTC..	25	1	2.00	2	0	0	0	2	0
................................................................................................................................................................................................................................................................................................................................................................CTGCCATCGCCGTTGAAGTTGCTGAG...........	26	1	2.00	2	0	0	1	1	0
........................................................................................................................................................................................................................................................................................................................................................................GCCGTTGAAGTTGCTGAGGCACTG.....	24	1	2.00	2	0	1	0	1	0
.......................................................................................................................................................................................................................................................................................................................................................................CGCCGTTGAAGTTGCTGAGGCACT......	24	1	1.00	1	0	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................GTTGAAGTTGCTGAGGCACTGGTC..	24	1	1.00	1	0	0	1	0	0
................................................................................................................................................................................................................................................................................................................................................................CTGCCATCGCCGTTGAAGTT.................	20	1	1.00	1	0	0	0	1	0
........................................................................................................................................................................................................................................................................................................................................................................GCCGTTGAAGTTGCTGAGGC.........	20	1	1.00	1	0	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................GGCTGCCATCGCCGTTGAAGT..................	21	1	1.00	1	0	0	0	1	0
.................................................................................................................................................................................................................................................................................................................................................AGGCCAAGGCGGAGGCTGCCATCGC...........................	25	1	1.00	1	0	0	1	0	0
.............................................................................................................................................................................................................................................................................................................................................................AGGCTGCCATCGCCGTTGAAGTTGCT..............	26	1	1.00	1	0	0	0	1	0
...............................................................................................................................................................................................................................................................................................................................................................GCTGCCATCGCCGTTGAAGTTGC...............	23	1	1.00	1	0	0	0	1	0
.......................................................................................................................................................................................................................................................................................................................................................................CGCCGTTGAAGTTGCTGAG...........	19	1	1.00	1	0	0	0	1	0
........................................................................................................................................................................................................................................................................................................................................................................GCCGTTGAAGTTGCTGAGGCACT......	23	1	1.00	1	0	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................................GGCCAAGGCGGAGGCTGCCATCGCC..........................	25	1	1.00	1	0	0	0	1	0
..........................................................................................................................................................................................................................................................................................................................................................................CGTTGAAGTTGCTGAGGCA........	19	1	1.00	1	0	0	0	1	0
.................................................................................................................................................................................................................................................................................................................................................AGGCCAAGGCGGAGGCTGCCA...............................	21	1	1.00	1	0	1	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................ATCGCCGTTGAAGTTGCTGAGGCAC.......	25	1	1.00	1	0	1	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................ATCGCCGTTGAAGTTGCTGAGG..........	22	1	1.00	1	0	0	1	0	0
.............................................................................................................................................................................................................................................................................................................................................................AGGCTGCCATCGCCGTTGAAGTTG................	24	1	1.00	1	0	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................GGCTGCCATCGCCGTTGAAGTTG................	23	1	1.00	1	0	0	0	1	0
.......................................................................................................................................................................................................................................................................................................................................................................CGCCGTTGAAGTTGCTGAGGC.........	21	1	1.00	1	0	0	1	0	0
..........................................................................................................................................................................................................................................................................................................................................................................CGTTGAAGTTGCTGAGGCACTG.....	22	1	1.00	1	0	1	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................ATCGCCGTTGAAGTTGCTGAGGCACT......	26	1	1.00	1	0	0	1	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TGAAGTTGCTGAGGCACTGGT...	21	1	1.00	1	0	0	1	0	0
..............................................................................................................................................................................................................................................................................................................................................................................GAAGTTGCTGAGGCACTG.....	18	1	1.00	1	1	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................CTGCCATCGCCGTTGAAGTTGCTGA............	25	1	1.00	1	0	0	1	0	0
..............................................................................................................................................................................................................................................................................................................................................................................GAAGTTGCTGAGGCACTGGT...	20	1	1.00	1	0	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................................................GCCATCGCCGTTGAAGTTGCTGAGG..........	25	1	1.00	1	0	0	0	1	0
....................................................................................................................................................................................................................................................................................................................................................CCAAGGCGGAGGCTGCCATCGC...........................	22	1	1.00	1	0	0	0	1	0

droVir3

CT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C------TTGTTGCAGGCCAAGGCAGAAGCTGCCATTGCCGTCGAAGTTGCTGAAGCGCTTGTCAA	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
...........................................................................................................................................................................................................................................................................................................................................................AGAAGCTGCCATTGCCGTC.......................	19	1	6.00	6	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................AGAAGCTGCCATTGCCGTCGAAGT..................	24	1	4.00	4	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
....................................................................................................................................................................................................................................................................................................................................................................CATTGCCGTCGAAGTTGCT..............	19	1	3.00	3	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................GCCGTCGAAGTTGCTGAAGCGCC......	23	1	2.00	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................ATTGCCGTCGAAGTTGCTGAAG..........	22	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................CGTCGAAGTTGCTGAAGC.........	18	1	2.00	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................CGTCGAAGTTGCTGAAGCGC.......	20	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2
.....................................................................................................................................................................................................................................................................................................................................................................ATTGCCGTCGAAGTTGCTGAAGCGCT......	26	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
.......................................................................................................................................................................................................................................................................................................................................................................TGCCGTCGAAGTTGCTGAAGCGCTT.....	25	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................AGAAGCTGCCATTGCCGTCGAAGTTGCC..............	28	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................AGGCCAAGGCAGAAGCTGCCA...............................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................GAAGTTGCTGAAGCGCTTGTCA.	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................ATTGCCGTCGAAGTTGCTGA............	20	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................AGAAGCTGCCATTGCCGTCGAA....................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
............................................................................................................................................................................................................................................................................................................................................................GAAGCTGCCATTGCCGTCGAAGTTGCT..............	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................AGAAGCTGCCATTGCCGT........................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................CAAGGCAGAAGCTGCCATTG............................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................GTCGAAGTTGCTGAAGCGCT......	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................GAAGCTGCCATTGCCGTCGAAGTT.................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................ATTGCCGTCGAAGTTGCTGAAGCGCTT.....	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................CATTGCCGTCGAAGTTGC...............	18	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................AAGCTGCCATTGCCGTCG......................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................CCGTCGAAGTTGCTGAAGCGCTTGTC..	26	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................GCCGTCGAAGTTGCTGAAGCGCTTG....	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................AGTTGCTGAAGCGCTTGTCAA	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................CGTCGAAGTTGCTGAAGCGCT......	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................AGGCCAAGGCAGAAGCTGCCATTGCCGTC.......................	29	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................GGCAGAAGCTGCCATTGCCGTCG......................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................CAAGGCAGAAGCTGCCATTGC...........................	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................GAAGCTGCCATTGCCGTCGAAGTTGC...............	26	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................GAAGCTGCCATTGCCGTCGA.....................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................CATTGCCGTCGAAGTTGCTGAAGC.........	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................TGCCGTCGAAGTTGCTGAAGCGCTTG....	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................TTGCCGTCGAAGTTGCTGAAGCGCTT.....	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................TTGCCGTCGAAGTTGCTGAA...........	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................AGAAGCTGCCATTGCCGTCGA.....................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................AGTTGCTGAAGCGCTTGTCA.	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................CCATTGCCGTCGAAGTTGCTGAA...........	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
....................................................................................................................................................................................................................................................................................................................................................................CATTGCCGTCGAAGTTGCTGAAGCG........	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................ATTGCCGTCGAAGTTGCTGAA...........	21	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................GCCGTCGAAGTTGCTGAAGCGCTTGT...	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................CGTCGAAGTTGCTGAAGCGCTTGT...	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................GCTGCCATTGCCGTCGAAGTT.................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................AGAAGCTGCCATTGCCGTCGAAGTTG................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................AAGGCAGAAGCTGCCATTGCC..........................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................TGCCATTGCCGTCGAAGTTGCTGAAG..........	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................TGCCGTCGAAGTTGCTGAAGCGT.......	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................TGCCGTCGAAGTTGCTGAAGCGCT......	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................GCTGCCATTGCCGTCGAAGTTGC...............	23	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................AGAAGCTGCCATTGCCGTCG......................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................TTGCTGAAGCGCTTGTCA.	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................CGAAGTTGCTGAAGCGCTTGT...	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
.......................................................................................................................................................................................................................................................................................................................................................................TGCCGTCGAAGTTGCTGAAGC.........	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

ACAAC-----------------------------------TA--A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTCATTC------GCATTGCAGGCCAAGGCAGAAGCTGCCATTGCCGTGGAAGTTGCTGAAGCGCTAGTCAA	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
............................................................................................................................................................................................................................................................................................................................................................GAAGCTGCCATTGCCGTGGAAGT..................	23	1	2.00	2	1	0	0	0	0	1
............................................................................................................................................................................................................................................................................................................................................................GAAGCTGCCATTGCCGTG.......................	18	1	1.00	1	0	0	0	0	0	1
..........................................................................................................................................................................................................................................................................................................................................................CAGAAGCTGCCATTGCCGTGGAAGT..................	25	1	1.00	1	0	0	0	0	0	1
...........................................................................................................................................................................................................................................................................................................................................................AGAAGCTGCCATTGCCGTGGA.....................	21	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................CGTGGAAGTTGCTGAAGC.........	18	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................AGAAGCTGCCATTGCCGTG.......................	19	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................AGAAGCTGCCATTGCCGTGGAAGT..................	24	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................CAGAAGCTGCCATTGCCGT........................	19	1	1.00	1	0	0	0	0	0	1
.....................................................................................................................................................................................................................................................................................................................................................................ATTGCCGTGGAAGTTGCT..............	18	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................ATTGCCGTGGAAGTTGCTGA............	20	1	1.00	1	1	0	0	0	0	0

droGri2

----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAGGCAAAGGCGGAAGCTGCCATCGCTGTGGAAGTTGCTGAAGCGCTCGTCAA	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

dsi_21945

x:9597821-9597970 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads