ID:

dsi_21854

 Coordinate:

3l:9647945-9648094 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.8 -7.8 -7.3

Flybase annnotation

three_prime_UTR [3l_9647411_9648358_-]; exon [3l_9647411_9648475_-]

No Repeatable elements found

Sense Strand Reads

##########################################################################################################################################################################################################################################################
TTACGAAAGGAGGTCTCCCCGTTGAAAAGCATAATTAGGATATTAAGGCCGTAACTAACTAAACACTATACTAAAAGCGAATATTTCAAGGGTCGCCGTGCAGCTACCATTCAAGTGCTAAAAGTAAAAAGAGAAACCCCCCGATCTGTGTTGGCAGTCATTAGTTATTAGACCAGCGACCGATCAATCCACAGTGCATCTCATTTTTAGAATCGTCAGGATCCATTTTAAAGATTGTACAGTTTCGTTG
********************************************************************((((...((((...........(((.((......)).))).......))))...))))........******************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 M053
female body
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 O001
Testis
 M025
embryo
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 M023
head
..................................................................................................................................................................................................TGCATCTCATTTTTAGAATCGTCAGGA............................. 27 0 1 10.00 10 3 5 0 1 0 0 1 0 0 0 0 0
........................................TATTAAGGCCGTAACTAACTAAACAC........................................................................................................................................................................................ 26 0 1 5.00 5 1 3 0 0 0 1 0 0 0 0 0 0
......................TGAAAAGCATAATTAGGATATTAAGGC......................................................................................................................................................................................................... 27 0 1 4.00 4 3 0 0 0 1 0 0 0 0 0 0 0
...............TCCCCGTTGAAAAGCATAATTAGGA.................................................................................................................................................................................................................. 25 0 1 4.00 4 1 1 0 1 0 0 0 0 0 0 1 0
........................................TATTAAGGCCGTAACTAACTAAACACTA...................................................................................................................................................................................... 28 0 1 4.00 4 2 2 0 0 0 0 0 0 0 0 0 0
........................................................................................................TACCATTCAAGTGCTAAAAGTAAAAAGAGA.................................................................................................................... 30 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TACCATTCAAGTGCTAAAAGTAAAAAGA...................................................................................................................... 28 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0
....................................................................TACTAAAAGCGAATATTTCAAGGGT............................................................................................................................................................. 25 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TTTAGAATCGTCAGGATCCAT........................ 21 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
...........................................................................................................CATTCAAGTGCTAAAAGTAAAAAGAGA.................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...................................................................................TTTCAAGGGTCGCCGTGCAGCTAAAA............................................................................................................................................. 26 2 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................CAGGATCCATTTTAAAGATTGTACAGT....... 27 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................CATTAGTTATTAGACCAGC......................................................................... 19 0 1 2.00 2 0 0 0 0 0 0 0 0 2 0 0 0
.....................TTGAAAAGCATAATTAGGATATTAAGGC......................................................................................................................................................................................................... 28 0 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0 0
...............................................................................AATATTTCAAGGGTCGCCGTGCAGCTAC............................................................................................................................................... 28 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
........................................TATTAAGGCCGTAACTAA................................................................................................................................................................................................ 18 0 1 2.00 2 0 0 0 0 0 0 0 2 0 0 0 0
......................................GATATTAAGGCCGTAACTAACTAAACAC........................................................................................................................................................................................ 28 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TCAGGATCCATTTTAAAGATTGTACAGT....... 28 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
.................................................................................TATTTCAAGGGTCGCCGTGCAGCTAC............................................................................................................................................... 26 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
........................................TATTAAGGCCGTAACTAACTAAACACT....................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................TCTCATTTTTAGAATCGTCAGGATCCA......................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TTTTTAGAATCGTCAGGATCCAT........................ 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................ATATTAAGGCCGTAACTAACT.............................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................TAAGGCCGTAACTAACTAAACACT....................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................AGTGCATCTCATTTTTAGAATCGTC................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................CCAGCGACCGATCAATCCACA......................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TTTTTAGAATCGTCAGGATCCATT....................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TGTGTTGGCAGTCATTAGTTATTAGGC............................................................................. 27 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................................................AAGGGTCGCCGTGCAGCT................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
...........................................TAAGGCCGTAACTAACTAAACACTA...................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGGATCCATTTTAAAGATTGTACAGTTT..... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TAAAAGTAAAAAGAGAAACCCCCCGATC........................................................................................................ 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
TTACGAAAGGAGGTCTCCCCGTT................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TTTAGAATCGTCAGG.............................. 15 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TCCATTTTAAAGATTGTACAGTTTCGT.. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................ATCAATCCACAGTGCATCTCATTTTTAGA....................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TTGCATCTCATTTTTAGAATCGTCAGG.............................. 27 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................CGCCGTGCAGCTACCATTCAA........................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................TAAAAAGAGAAACCCCCCGATCTGTGT................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................CACAGTGCATCTCATTTTTAGAATCGTC................................. 28 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
................................................................................................................................................................................................................................ATTTTAAAGATTGTACAGTTTCGTCC 26 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................TATTAGACCAGCGATCGATCAATCCACAG........................................................ 29 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................TCAATCCACAGTGCATCTCATTTTTAGA....................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................GAAACCCCCCGATCTGTGTTGGC............................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................CTATACTAAAAGCGAATATT..................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................TATACTAAAAGCGAATATTTCAAGGGT............................................................................................................................................................. 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................TAAAAGCGAATATTTCAAGGGTCGTCG........................................................................................................................................................ 27 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................TCAAGGGTCGCCGTGCAGCT................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................ACTAATTAAACACAATCCTAAAA.............................................................................................................................................................................. 23 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................TCTCATTTTTAGAATCGTCAGGATCCATTT...................... 30 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................ATACTAAAAGCGAATATTTCAAGGGTC............................................................................................................................................................ 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
.............................................................................................................TTCAAGTGCTAAAAGTAAAAAGAGA.................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................CATTAGTTATTAGACCAGCGACC..................................................................... 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
TTACGAAAGAAGGTCTCCCCGTTGA................................................................................................................................................................................................................................. 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................TCATTTTTAGAATCGTCAGGATCCAT........................ 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................TCATTAGTTATTAGACCAGCGACCGA................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...............................TAATTAGGATATTAAGGCCGTAAC................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.........................AAAGCATAATTAGGATATTAAGGC......................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................TTTCAAGGGTCGCCGTGCAGCTACCA............................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................TCATTTTTAGAATCGTCAGGATCCATT....................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................AAGGGTCGCCGTGCAGCTACCATTCAA........................................................................................................................................ 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................CTACCATTCAAGTGCTAAAAGTAA........................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
................................................................................ATCTTACAAGGGTCGCCG........................................................................................................................................................ 18 2 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................GCAGCGATCGTTCAAGTGCT................................................................................................................................... 20 3 6 0.33 2 0 0 2 0 0 0 0 0 0 0 0 0
.............................................................................................................................AAAAAGACACACCCCACGATC........................................................................................................ 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TCGATCTGCGTTGGCAGTC........................................................................................... 19 2 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0
.TACGAAAGTAGGTCT.......................................................................................................................................................................................................................................... 15 1 7 0.14 1 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................TAAAAGTAGAAAGAGGAAACC............................................................................................................... 21 3 7 0.14 1 0 0 0 0 0 0 0 0 1 0 0 0
............................................................................................................................................................................................................TTTTAGAACAGTGAGGATC........................... 19 3 17 0.12 2 0 0 0 0 0 0 0 0 0 1 0 1
..............................................................................................................................................................................................................TGAGAACCGTCAGGATC........................... 17 2 10 0.10 1 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................CGTTCTGTGTTGGCA.............................................................................................. 15 1 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................GATGAAGGACGTAACTAAC............................................................................................................................................................................................... 19 3 16 0.06 1 0 0 0 0 0 0 0 0 0 1 0 0
......................................................................................................................................................................................................ACTGATTTTTAGAATCG................................... 17 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................CTTTCTAGTATCGTCAGG.............................. 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

AATGCTTTCCTCCAGAGGGGCAACTTTTCGTATTAATCCTATAATTCCGGCATTGATTGATTTGTGATATGATTTTCGCTTATAAAGTTCCCAGCGGCACGTCGATGGTAAGTTCACGATTTTCATTTTTCTCTTTGGGGGGCTAGACACAACCGTCAGTAATCAATAATCTGGTCGCTGGCTAGTTAGGTGTCACGTAGAGTAAAAATCTTAGCAGTCCTAGGTAAAATTTCTAACATGTCAAAGCAAC
********************************************************************************************************************((((...((((...........(((.((......)).))).......))))...))))........******************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M024
male body		 SRR902008
ovaries
 M025
embryo
 M053
female body
.........................................................................................................................................................................TCTGGTCGATGGCTAG................................................................. 16 1 2 1.50 3 0 3 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................AGTTAGGTGTCACGTAGAGTA.............................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
..............................................CCGGCGTTGATTGATTTGTGA....................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................CTAGTTAGGTGTCACGTAGAGT............................................... 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
...............AGGAGCAACTTTTCGT........................................................................................................................................................................................................................... 16 1 5 1.00 5 4 0 0 0 1 0 0 0 0 0
.................................................................................ATAAAGTTCCCAGCGGCACGT.................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TGGTCGCTGGATACCTAGGTGTC........................................................ 23 3 2 1.00 2 0 0 0 2 0 0 0 0 0 0
.....................................................................................................................................TTTGCGGGGCTAGACACAACC................................................................................................ 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................TCGCTGGCTAGCTAGATGTCAGGT.................................................... 24 3 1 1.00 1 0 0 0 0 0 0 0 1 0 0
...............................................................................................................................................................................CGCTGGCTAGTTAGGTGTA........................................................ 19 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................GTCGCTGGATACTTAGATGTC........................................................ 21 3 2 0.50 1 0 0 0 0 0 0 0 0 1 0
............................................................................................................................................................................GGTCGCTGGATAGCTAGATGTC........................................................ 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 1
...................................................................................................................................ATTTTGCGGGGCTAGACACAA.................................................................................................. 21 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................TCGCTCGCTAGTTAGGT........................................................... 17 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GGTCGCTGGCTAGCTAATTGT......................................................... 21 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0
...................................................................................AAAGTTCCCGGCGGC........................................................................................................................................................ 15 1 11 0.27 3 0 0 0 0 3 0 0 0 0 0
................................................................................................................................................................................................TCACGTAGAGTATAAA.......................................... 16 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0
....................................................TTGGTCGATTGGTGATATGAT................................................................................................................................................................................. 21 3 6 0.17 1 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................GTGTGACGTAGAGTATAAA.......................................... 19 2 6 0.17 1 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................CTGTTCGGTTGCTAGTTAGG............................................................ 20 3 7 0.14 1 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................AGAAAGAACCGTCAGTAA........................................................................................ 18 2 8 0.13 1 0 1 0 0 0 0 0 0 0 0
.........................................................TGATTGGTGATATGATT................................................................................................................................................................................ 17 1 16 0.13 2 0 2 0 0 0 0 0 0 0 0
...................................................................................AAAGTTCCCGGCGGCCC...................................................................................................................................................... 17 2 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................AAAGATCATAGCAGTC............................... 16 2 20 0.10 2 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................AAAATTTCAAAGATGTCAATG.... 21 3 10 0.10 1 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................AAAAGCTTAGCCGTCCT............................. 17 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0
.........................................................TGATTGGTGATATGATTC............................................................................................................................................................................... 18 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:9647895-9648144 - dsi_21854 TT--ACGAA-AGG----A-GGTCTCCCCG-T----------------------TGAAAAGCATAA--TTAGGATATTAAGGC-CG------TAACTA-------ACTAA-AC---------ACT-ATACTAAAAGC-GAA---TATTTCAAGGGTCGCCG-TGC-------AGCT------------------ACCATTCAAGTGCTAAAA-GTAAAAAG--------AG-AAA-CCC---CCCG--ATCTGTGTTGGCAGTCATTAGTTATTAGACCAG---------------------CGACCGATCAAT----CCACA---GTGCATCTCA----------------------------TTTTTAGA----------------ATCGTCAGGAT-----------------------------------------CCA--TTTTAAAGA-------------------------------------------------------------TTGTACAGTTTCGT--TG
droSec2 scaffold_0:2120689-2120938 - TT--ACGAA-AAG----A-GGTCTACCCG-T----------------------TGAAAAGCATAA--TTAGGATATTAAGGC-CG------TAACTA-------ACTAA-AC---------ACT-ATACTAAAAGC-GAA---TATTTCAAGGGTCGCCG-TGC-------AGCT------------------ACCATTCAAGTGCTAAAA-GTAAAAAAG-------AG-AAA-CCC----CCG--ATCTGTGTTGGCAGTCATTAGTTATTAGACCAG---------------------CGACCGATCAAT----CCACA---GTGCATCTCA----------------------------TTTTTAGA----------------ATCGTCAGGAT-----------------------------------------CCA--TTTTAAAGA-------------------------------------------------------------TTGTACAGTTTCGT--TG
dm3 chr3L:9888397-9888645 - TT--ACGAA-AGA----A-GGTCTCCCCG-T----------------------TGAAGAGCATAA--TTAGGATATTAAGGC-CG------TAACTA-------ACTAA-AC---------ACT-ATACTAAAAGC-GAA---TATTTCAAGGGTCGCCG-TGC-------AGCT------------------ACCATTCAAGTGCTAAAA-GTAAAAAAG-------GA--AAACC-----CCG--ATCTGTGTTGGCAGTCATTAGTTATTAGACCAG---------------------CGACCGATCAAT----CCACA---GTGCATCTCA----------------------------TTTTTAGA----------------ATCGTCAGGAT-----------------------------------------CCA--TTTTAAAGA-------------------------------------------------------------TTGTACAGTTTCGT--TG
droEre2 scaffold_4784:9879823-9880072 - TT--ACGAA-AGG----A-GGT--CCCCG-TTT----------AAAGTGATTTTGAAAAGCATAA--TTAGGATAGTAAGGC-CG------TAACTA-------ACTAA-AC---------ACT-ATACTAAAAGC-AAA---TATTTCAAGTGTCGCAGAAGC-------AGCT------------------ACCTTTAAAGTGCTAAAT-GAG-------------GAA----CC-----CAG--ATCT--GTAGGCAGTCATTAGTTATTAGACCAG---------------------CGATCGATCAAT----CCACA---GTGCATCTCA----------------------------TTTTTAGA----------------ATCGTCAGGCT-----------------------------------------CCA--TTTTAAAGA-------------------------------------------------------------TTGTACAGTTTCGT--TG
droYak3 3L:9864628-9864878 - TT--ACGAA-AGA----AGGGT--CCCCG-TTT----------AAAGTGATTTTGAAAAGCATAA--TTAGGATAGTAAGGC-CG------TAACTA-------ACAAA-AC---------ACT-ATACTAAAAGC-AAA---TATTTCAAGAGTTGCAGAAGC-------AACT------------------ACCATTAAAGTGCTAAAT-GAG-------------AAA----CC-----CAG--ATCT--GTAGGCAGTCATTAGTTATTAGACCAG---------------------CGATCGATCAAT----CCACA---GTGCATCTCA----------------------------TTTTTAGA----------------ATCGTCAGGCT-----------------------------------------CCA--TTTTAAAGA-------------------------------------------------------------TTGTACAGTTTCGT--TG
droEug1 scf7180000409711:1746001-1746252 - TTA-ATGAA-AGA----GGGGT--CCCCG-TTT----------AAAGTGATTTTGAAAAGCATAA--TTAGGATGTTAAGGC-CG------TAACTA-------ACTAAAAC---------ACT-ATACTAAAAGC-AAA---TATTTTGGGAGTCGCAAGAAA-------AGCT------------------ACCATTAAAGTGCTAAAAAGAG-------------AAA----CG-----GAG--AACT--GTAGGCAGTCATTAGTTATTAGATCAG---------------------CGACCGATCAAT----TCAC----TTGCAACTCA----------------------------TATATAGA----------------ATCTTCAGGAG-----------------------------------------CCA--TTTTAAAAT-----------------------------------------------------------ATTTGTACAGTTT-----TG
droBia1 scf7180000302428:7875946-7876195 + TA--TCGAA-AAGA---A-GGT--CCCCG-TTT----------AAAGTGATTTTGA-AAGCATAA--TTAGTGTGTTAAGGC-CG------TAACTA-------ACTAA-AC---------TCT-ATACTAAAAAC-AAA---TATTTCGAGA-------------------GCT------------------ACGATTAAAGTGCTAAAA-GTG-------------AAT----AG-----CAG--AACT--GTAGGCAGTCATTAGTTATTAGACCAG---------------------CGACCGATCAAC---TCCAC-----TGCACC-CA-------------CTAAAAAACCCAA--GTTATAGA----------------ATCTTCAGGCT-----------------------------------------CCA--TTTTAAAGA------------------------------------------------------------TTTGTACAGTTTCGT--TG
droTak1 scf7180000415269:137780-138043 + TA--TCGAA-AGG----A-GGT--CCCCG-TTTAAACCCATTAAAAGTGATTTTGAAAAGCATAA--TTAGGATGTTAAGGC-CG------TAACTA-------ACTAA-AC---------ACT-ATACTAAAAGC-AAA---TATTTCGAGAGTCGCAGGAGC-------AGCT------------------ACCATTAAAGTGCTAGAA-GAG-------------GAA----CC-----CAGAAAACA--GTAGGCAGTCATTAGTTATTAGACCAG---------------------CGACCGATCAAT----CCAC----TAGCTCCCCA-------------C--------T----TTTTATAGA----------------ATCTTCAGGCC-----------------------------------------ACA--TTTTAGAGA-------------------------------------------------------------TTGTACAGTTTTGT--TG
droEle1 scf7180000490564:690965-691233 - TA--TCGAA-AGGAAGGA-GGT--ACCCG-TTTAAAC---TTTAAAGTGATTTTGAAAAGCATAA--TTAGGATGTTAAGGC-CG------TAACTA-------ACTAA-ATAAAACAAACACT-ATACTGAAAGC-AAA---TATTTCGAGAGTCGCAGGAGC-------AGCT------------------ACCATTAAAGTGCTAAAA-GAG-------------AAA----CA-----CAG--AACT--GTAGGCAGTCATTAGTAATTAGATCAG---------------------CGACCGATCAAG----CCAC----TCGCAACCCG----------------------------TTCATTGA----------------ATCTTCAGGCT-----------------------------------------CCA--TTTTAGAGA-------------------------------------------------------------TTGTACAGTTTTGT--TG
droRho1 scf7180000776514:91175-91432 - TA--TCGAA-AGGAAAGA-GTT--ACCCG-TTT----------AAAGTGATTTTGAAAAGCATAA--TTAGGATGTTAAGGG-CG------TAACTA-------ATTAA-AC---------ACT-ATACTAAAAGC-AAA---TATTTCGAGAGTCGCAGAAGC-------AGCT------------------ACCATTAAAGTGCTAAAA-GAG-------------GAA----CA-----CAG--AACT--GTAGACAGTCATTAGATATTAGACCAG---------------------CGACCGATCAAC----CCAC----TTGCAACCCA--------------------ACCC---GTTCATAGA----------------ATCTTCATGCT-----------------------------------------CCA--TTTTAAAGA-------------------------------------------------------------TTGTACAGTTTTGT--TG
droFic1 scf7180000453807:1050173-1050412 - TA--TCGAA-AGG----A-TGT--CCCCG-TTT----------AAAGTGATTTTGAAAGGCATAA--TTAGGATGTTAAGAC-CG------TAACTA-------ACTAA-AC-----------T-CTACTAAAATC-AAA---TATTTCGAGAGTCGCAGAAAT-------AGCT------------------ACCATCAAAGTGCTAAAA-GAG-------------AAA--A-CTC---ACAG--AACT--GTAGGCAGTCATTAGTTATTAGATCAG---------------------CGACCGATCAA-------------------CTCA----------------------------TTTATAGA----------------ATCGTCAGGCTC----------------------------------------CCA--TTTTAAAGA-------------------------------------------------------------ATGTACAGTTTTGT--TG
droKik1 scf7180000302486:2489121-2489410 - TA--T-GAATAGGATGCAGCGC--CCTCG-TTT----------AAAGTGATTTTGAAAAGCATAA--TTAGGATGTTAAGGC-CG------TAACTA-------ACTAA-AC---------ACAAATACTGAAAACAAAAGCCAATCCCAAAAAAAAAAAAAA-----------T------------------A-GAGTAAAGTGCTAAAA-GAG-------------AG-AAA-CAC---AGAG--AGCT--GTA----GTCATTAGGTATTAGACCAG---------------------CGACCGATCAATATTTGCAC----TGGCACCCTC---------------------CC----CGTCATAGAACCATAGGAACCTAGAAT---CAGGAT----------------------TAG----GAT-CGGCTCCTCCA--TTTTAAGAA-------------------------------------------------------------TTGTACAGTTGTTTTGTG
droAna3 scaffold_13337:14818118-14818434 - TGTATCGAA-AGG----A-TGT--CCCCGAATT----------AAAGTGATTTTGGAAAGCATAA--TTAGAATGTTAAGGC-CG------TAACTA-------ACTAA-ACACAGTAAACAAT-ATACTAAA-TC-------TATTTCGAAAGTCGCAAAAGTTAAAAAAAGATACAAAATATTAATGGTGTAAACATAAAGTGCTAAAG-T-AAAAAAAATACAAGAAA----TT-----CAG--AACT--GTAGGCAGTCATTAGTTATTAGACCAG---------------------CGACCGATCAAG----CCAC----TCGCACCACA----------------------------TTTTT------------------------------------------------------------------------------TTAGGGA-TTCGCTCCAAGCTCCAGCGAACTCCCACCTACTTTCTC--------------------TCATGTACAGTTGAGTTTTG
droBip1 scf7180000395155:749250-749554 - TGTATCGAA-AGG----A-TGT--CCCCGAATT----------AAAGTGATTTTGGAAAGCATAA--TTAGGACTTTAAGGC-CG------TAACTAAACTAAAACTAA-AAACAGTAAACAAT-ATACTAA-AGC-AAA-TCTATTTCAAAAAAAAACGAAGC-------AA------AATATTAATGGTGTAAACATAAAGTGCTAAAA-TAC-AAGA------AGAAA----TT-----GAG--AACT--CTAGGCAGTCATTAGTTAGTAGACCAG---------------------CGACCGATCAAG----CCACTTACTTGCACCACA----------------------------TTTGTAGA----------------ATCGC------------------------------------------------GA--TTTG-TAGA---------------------ATTCTTAGTTACTTTCTC--------------------TCATGTACAGTTGAGTTTTG
dp5 XR_group6:7757253-7757567 + TAT-TCGAG-ACGAAGCC-AGC--CCCCA-TAT----------AAAGTGATTTCTAAAACCATATTTTTAGGACATTAAGACCCG------TAACTA-------ACTAC-AC--ACTAATGAAT-ATACTAAAAGCGAAA---TATTTCCAAAGTA--------------------------------------AAAGTCAAGTGCTAAAG-G-G-------------AAA----CCCAGAACAG--AACT--GTAGGCAGTCATTAGCTAGTAGATCAT---------------------TGGAA---C------------------------------------------AAAAA-CAAT-CTTTTAAA----------------CTCGTAAAGCTCACTTTTTATAGTTCTCGCTACTAAAGCTGTTCTCGCTACTC-AGTTTTTAAAGATTTCGCTACT-TCTCAAGCG------------TTTTTTT--------------------TTGTGTACAGATGTGT--TT
droPer2 scaffold_27:697694-698010 - TAT-TCGAG-ACGAAGCC-AGC--CCCCA-TAT----------AAAGTGATTTCTAAAACCATATTTTTAGGACATTAAGACCCG------TAACTA-------ACTAC-AC--ACTAATGAAT-ATACTAAAAGCGAAA---TATTTCCAAAGTA--------------------------------------AAAGTCAAGTGCTAAAG-G-G-------------AAA----CCCAAAACAG--AACT--GTAGGCAGTCATTAGCTAGTAGATCAT---------------------TGGAA---C------------------------------------------AAAAA-CAAT-CTTTTAAA----------------CTCGTAAAGCTCACTTTTTATAGTTCTCGCTACTAAAGCTGTTCTCGCTACTC-AGTTTTTAAAGATTTCGCTACT-TCTCAAGCG----------TTTTTTTTT--------------------TTGTGTACAGATGTGT--TT
droVir3 scaffold_13049:9016926-9017252 - TC--GTC---AGCAAGTA-ACT--CCCCA-TTT----------AAAGTGATTTCTAAAAGCATAA--TTAAGAC--TAAGC--CGAGCGCATA--CAACCT--AATTAA-AAACAGCAAAA-CG-TGAATAAAAAC-AAA-------GCAAATGTCGAAA-AAC-------GATT------------------ACATTAAAAGTGCTAAAA-TGG-------------AAA----CT-----AAA--AACA--GTAGGCAGT-------TTTTAGACCAGGGCGGACGGGACGGGACGGGACGACGGACAGAC----GGAAA---TTGCATTACATCTATAGCATATAT---TAAAGCAAA--TTTTTATA----------------AATA-----AC----------------------TAA----GCG---------CCA--TTTTTTCAT-------------------------------ATT-TC-TATATATACAATAATGTATAATTTTATACGTTTGTGT--TC
droMoj3 scaffold_6680:6327033-6327035 + TT--G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TT--ACGAA-AGG----A-GGTCTCCCCG-T----------------------TGAAAAGCATAA--TTAGGATATTAAGGC-CG------TAACTA-------ACTAA-AC---------ACT-ATACTAAAAGC-GAA---TATTTCAAGGGTCGCCG-TGC-------AGCT------------------ACCATTCAAGTGCTAAAA-GTAAAAAG--------AG-AAA-CCC---CCCG--ATCTGTGTTGGCAGTCATTAGTTATTAGACCAG---------------------CGACCGATCAAT----CCACA---GTGCATCTCA----------------------------TTTTTAGA----------------ATCGTCAGGAT-----------------------------------------CCA--TTTTAAAGA-------------------------------------------------------------TTGTACAGTTTCGT--TGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................................................................................................................TGCATCTCA----------------------------TTTTTAGA----------------ATCGTCAGGA.......................................................................................................................................27110.001000000035010010000
.........................................................................TATTAAGGC-CG------TAACTA-------ACTAA-AC---------AC.........................................................................................................................................................................................................................................................................................................................................................................................................................2615.00500000013001000000
.....................................................TGAAAAGCATAA--TTAGGATATTAAGGC-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.00400010030000000000
.......................TCCCCG-T----------------------TGAAAAGCATAA--TTAGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.00400000011110000000
.........................................................................TATTAAGGC-CG------TAACTA-------ACTAA-AC---------ACT-A......................................................................................................................................................................................................................................................................................................................................................................................................................2814.00400000022000000000
..............................................................................................................................................................................T------------------ACCATTCAAGTGCTAAAA-GTAAAAAG--------AG-A............................................................................................................................................................................................................................................................................................................3013.00300000030000000000
..............................................................................................................................................................................T------------------ACCATTCAAGTGCTAAAA-GTAAAAAG--------A...............................................................................................................................................................................................................................................................................................................2813.00300000021000000000
..............................................................................................................................TACTAAAAGC-GAA---TATTTCAAGGGT.........................................................................................................................................................................................................................................................................................................................................................................................2513.00300000021000000000
.............................................................................................................................................................................................................................................................................................................................................................................TTTAGA----------------ATCGTCAGGAT-----------------------------------------CCA--T.......................................................................................2112.00200000000000002000
...................................................................................................................................................................................................CATTCAAGTGCTAAAA-GTAAAAAG--------AG-A............................................................................................................................................................................................................................................................................................................2712.00200000020000000000
........................................................................................................................................................................................................................................................................................................................................................................................................CAGGAT-----------------------------------------CCA--TTTTAAAGA-------------------------------------------------------------TTGTACAGT.........2712.00200000011000000000
......................................................................................................................................................................................................................................................................CATTAGTTATTAGACCAG---------------------C......................................................................................................................................................................................................................................1912.00200200000000000000
..............................T----------------------TGAAAAGCATAA--TTAGGATATTAAGGC-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00200000001010000000
..........................................................................................................................................AA---TATTTCAAGGGTCGCCG-TGC-------AGCT------------------AC.................................................................................................................................................................................................................................................................................................................................................2812.00200000011000000000
.........................................................................TATTAAGGC-CG------TAACTA-------A...........................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200002000000000000
.......................................................................GATATTAAGGC-CG------TAACTA-------ACTAA-AC---------AC.........................................................................................................................................................................................................................................................................................................................................................................................................................2812.00200000002000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TCAGGAT-----------------------------------------CCA--TTTTAAAGA-------------------------------------------------------------TTGTACAGT.........2812.00200000002000000000
...............................................................................................................................................TATTTCAAGGGTCGCCG-TGC-------AGCT------------------AC.................................................................................................................................................................................................................................................................................................................................................2612.00200000002000000000
.........................................................................TATTAAGGC-CG------TAACTA-------ACTAA-AC---------ACT-.......................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
..........................................................................................................................................................................................................................................................................................................................................TCTCA----------------------------TTTTTAGA----------------ATCGTCAGGAT-----------------------------------------CCA--........................................................................................2711.00100000000010000000
...........................................................................................................................................................................................................................................................................................................................................................................TTTTTAGA----------------ATCGTCAGGAT-----------------------------------------CCA--T.......................................................................................2311.00100000000000001000
........................................................................ATATTAAGGC-CG------TAACTA-------ACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
............................................................................TAAGGC-CG------TAACTA-------ACTAA-AC---------ACT-.......................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000001000000000
.................................................................................................................................................................................................................................................................................................................................A---GTGCATCTCA----------------------------TTTTTAGA----------------ATCGTC...........................................................................................................................................2511.00100000010000000000
....................................................................................................................................................................................................................................................................................CCAG---------------------CGACCGATCAAT----CCACA---...............................................................................................................................................................................................................2111.00100000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................TTTTTAGA----------------ATCGTCAGGAT-----------------------------------------CCA--TT......................................................................................2411.00100000010000000000
.....................................................................................................................................................AAGGGTCGCCG-TGC-------AGCT------------------...................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
............................................................................TAAGGC-CG------TAACTA-------ACTAA-AC---------ACT-A......................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................AGGAT-----------------------------------------CCA--TTTTAAAGA-------------------------------------------------------------TTGTACAGTTT.......2811.00100000010000000000
..............................................................................................................................................................................................................TAAAA-GTAAAAAG--------AG-AAA-CCC---CCCG--ATC..........................................................................................................................................................................................................................................................................................2811.00100010000000000000
TT--ACGAA-AGG----A-GGTCTCCCCG-T----------------------T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TTTAGA----------------ATCGTCAGG........................................................................................................................................1511.00100000001000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------------------------CCA--TTTTAAAGA-------------------------------------------------------------TTGTACAGTTTCGT--..2711.00100000010000000000
...................................................................................................................................................................................................................................................................................................................ATCAAT----CCACA---GTGCATCTCA----------------------------TTTTTAGA----------------.................................................................................................................................................2911.00100000010000000000
...........................................................................................................................................................CGCCG-TGC-------AGCT------------------ACCATTCAA..........................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
.....................................................................................................................................................................................................................TAAAAAG--------AG-AAA-CCC---CCCG--ATCTGTGT.....................................................................................................................................................................................................................................................................................2711.00100000001000000000
..............................................................................................................................................................................................................................................................................................................................CACA---GTGCATCTCA----------------------------TTTTTAGA----------------ATCGTC...........................................................................................................................................2811.00100000000100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................A--TTTTAAAGA-------------------------------------------------------------TTGTACAGTTTCGT--CC2611.00100000000001000000
....................................................................................................................................................................................................................................................................................................................TCAAT----CCACA---GTGCATCTCA----------------------------TTTTTAGA----------------.................................................................................................................................................2811.00100000001000000000
.....................................................................................................................................................................................................................................G-AAA-CCC---CCCG--ATCTGTGTTGGC.................................................................................................................................................................................................................................................................................2311.00101000000000000000
..........................................................................................................................CT-ATACTAAAAGC-GAA---TATT.................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000001000000
...........................................................................................................................T-ATACTAAAAGC-GAA---TATTTCAAGGGT.........................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000010000000
...................................................................................................................................................TCAAGGGTCGCCG-TGC-------AGCT------------------...................................................................................................................................................................................................................................................................................................................................................2011.00100000010000000000
..........................................................................................................................................................................................................................................................................................................................................TCTCA----------------------------TTTTTAGA----------------ATCGTCAGGAT-----------------------------------------CCA--TTT.....................................................................................3011.00100000001000000000
.............................................................................................................................ATACTAAAAGC-GAA---TATTTCAAGGGTC........................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
.....................................................................................................................................................................................................TTCAAGTGCTAAAA-GTAAAAAG--------AG-A............................................................................................................................................................................................................................................................................................................2511.00100000010000000000
......................................................................................................................................................................................................................................................................CATTAGTTATTAGACCAG---------------------CGACC..................................................................................................................................................................................................................................2311.00100010000000000000
............................................................................................................................................................................................................................................................................................................................................TCA----------------------------TTTTTAGA----------------ATCGTCAGGAT-----------------------------------------CCA--T.......................................................................................2611.00100000000000010000
.....................................................................................................................................................................................................................................................................TCATTAGTTATTAGACCAG---------------------CGACCGA................................................................................................................................................................................................................................2611.00100010000000000000
..............................................................TAA--TTAGGATATTAAGGC-CG------TAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000010000000
........................................................AAAGCATAA--TTAGGATATTAAGGC-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
.................................................................................................................................................TTTCAAGGGTCGCCG-TGC-------AGCT------------------ACCA...............................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
............................................................................................................................................................................................................................................................................................................................................TCA----------------------------TTTTTAGA----------------ATCGTCAGGAT-----------------------------------------CCA--TT......................................................................................2711.00100000000000001000
.....................................................................................................................................................AAGGGTCGCCG-TGC-------AGCT------------------ACCATTCAA..........................................................................................................................................................................................................................................................................................................................................2711.00100000000001000000
.............................................................................................................................................................................CT------------------ACCATTCAAGTGCTAAAA-GTAA............................................................................................................................................................................................................................................................................................................................2411.00100001000000000000
droSec2
TT--ACGAA-AAG----A-GGTCTACCCG-T----------------------TGAAAAGCATAA--TTAGGATATTAAGGC-CG------TAACTA-------ACTAA-AC---------ACT-ATACTAAAAGC-GAA---TATTTCAAGGGTCGCCG-TGC-------AGCT------------------ACCATTCAAGTGCTAAAA-GTAAAAAAG-------AG-AAA-CCC----CCG--ATCTGTGTTGGCAGTCATTAGTTATTAGACCAG---------------------CGACCGATCAAT----CCACA---GTGCATCTCA----------------------------TTTTTAGA----------------ATCGTCAGGAT-----------------------------------------CCA--TTTTAAAGA-------------------------------------------------------------TTGTACAGTTTCGT--TGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................ATTAAGGC-CG------TAACTA-------ACTA........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
.................................................................................................................................................................................................................................................................................AGACCAG---------------------CGACCGATCAAT----CCACA---...............................................................................................................................................................................................................2411.0011000
.........................................................................................................................................................................................................AGTGCTAAAA-GTAAAAAAG-------A...............................................................................................................................................................................................................................................................................................................2011.0010010
................................................................A--TTAGGATATTAAGGC-CG------TAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000
............................................................................................................................................................................................................................G-------AG-AAA-CCC----CCG--ATCTGTGTTGGCAGT..............................................................................................................................................................................................................................................................................2711.0010100
...................................................................................................................................................................................................................................................................................ACCAG---------------------CGACCGATCAAT----CCACA---GTGC...........................................................................................................................................................................................................2611.0010010
...........................................................................................................................................................................................................................................................................................................................................................................TTTTTAGA----------------ATCGTCAGGAT-----------------------------------------CCA--T.......................................................................................2311.0011000
...................................................................................................................................AAAGC-GAA---TATTTCAAGGGT.........................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
...........................................................................................................AA-AC---------ACT-ATACTAAAAGC-GAA---T....................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
............................G-T----------------------TGAAAAGCATAA--TTAGGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
...................GGTCTACCCG-T----------------------TGAAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
....................................................................................................................................................................................................................................................................GTCATTAGTTATTAGACCAG---------------------CGACC..................................................................................................................................................................................................................................2511.0010010
......................................................................................................................................................................................................................................................................CATTAGTTATTAGACCAG---------------------C......................................................................................................................................................................................................................................1911.0010010
.....................................................................................................................................................................................................TTCAAGTGCTAAAA-GTAAAAAAG-------AG-.............................................................................................................................................................................................................................................................................................................2511.0010001
.....................................................................................................................................................AAGGGTCGCCG-TGC-------AGCT------------------ACC................................................................................................................................................................................................................................................................................................................................................2111.0010001
dm3
TT--ACGAA-AGA----A-GGTCTCCCCG-T----------------------TGAAGAGCATAA--TTAGGATATTAAGGC-CG------TAACTA-------ACTAA-AC---------ACT-ATACTAAAAGC-GAA---TATTTCAAGGGTCGCCG-TGC-------AGCT------------------ACCATTCAAGTGCTAAAA-GTAAAAAAG-------GA--AAACC-----CCG--ATCTGTGTTGGCAGTCATTAGTTATTAGACCAG---------------------CGACCGATCAAT----CCACA---GTGCATCTCA----------------------------TTTTTAGA----------------ATCGTCAGGAT-----------------------------------------CCA--TTTTAAAGA-------------------------------------------------------------TTGTACAGTTTCGT--TGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................TATTTCAAGGGTCGCCG-TGC-------AGCT------------------AC.................................................................................................................................................................................................................................................................................................................................................26118.00180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000900000
...............................................................................................................................................................................................................................................................................................................................................................................TAGA----------------ATCGTCAGGAT-----------------------------------------CCA--TTTTAAAGA-------------------------------------------------------------..................27115.001500000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------------------------CCA--TTTTAAAGA-------------------------------------------------------------TTGTACAGTTTCGT--..27113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000010101010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000300000
.................................................................................................................................................................................................................................................................................AGACCAG---------------------CGACCGATCAAT----CCA....................................................................................................................................................................................................................2219.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................A--TTTTAAAGA-------------------------------------------------------------TTGTACAGTTTC......2218.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GACCGATCAAT----CCACA---GTGC...........................................................................................................................................................................................................2018.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................AAGGGTCGCCG-TGC-------AGCT------------------ACCATTC............................................................................................................................................................................................................................................................................................................................................2517.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002301000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................CGCCG-TGC-------AGCT------------------ACCATTCAAGTGC......................................................................................................................................................................................................................................................................................................................................2517.0070000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000301000
..........................................................................................................................................................TCGCCG-TGC-------AGCT------------------ACCATTCAAGTGC......................................................................................................................................................................................................................................................................................................................................2617.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000020000000001000000000000000300000
...................................................................................................................................................TCAAGGGTCGCCG-TGC-------AGCT------------------ACCATT.............................................................................................................................................................................................................................................................................................................................................2617.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................TCATTAGTTATTAGACCAG---------------------CGACCGA................................................................................................................................................................................................................................2616.0060000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100300000
...................................................................TTAGGATATTAAGGC-CG------TAACTA-------AC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................TATTTCAAGGGTCGCCG-TGC-------AGCT------------------ACC................................................................................................................................................................................................................................................................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000400000
..........................................................................................................................CT-ATACTAAAAGC-GAA---TATTTCA..............................................................................................................................................................................................................................................................................................................................................................................................2315.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................AA---TATTTCAAGGGTCGCCG-TGC-------AGC......................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TGCATCTCA----------------------------TTTTTAGA----------------ATCGTCAGGA.......................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................A---TATTTCAAGGGTCGCCG-TGC-------AGC......................................................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000
....................................................................................................................................AAGC-GAA---TATTTCAAGGGTCG.......................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000
....................................................................................................................................................................................................................................................................................CCAG---------------------CGACCGATCAAT----CCACA---GTGCA..........................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................AAGGGTCGCCG-TGC-------AGCT------------------ACCATT.............................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.............................................................................................................................................................................................................................................................................TATTAGACCAG---------------------CGACCGATC..............................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.........................CCCG-T----------------------TGAAGAGCATAA--TTAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...........................................................................................................................................A---TATTTCAAGGGTCGCCG-TGC-------AGCT------------------AC.................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................C---------ACT-ATACTAAAAGC-GAA---TATTTCAAGG...........................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....ACGAA-AGA----A-GGTCTCCCCG-T----------------------TG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.............................................................................AAGGC-CG------TAACTA-------ACTAA-AC---------A..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................ACCGATCAAT----CCACA---GTGCATCTCA----------------------------T........................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................AAGTGCTAAAA-GTAAAAAAG-------GA--A...........................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...............................................................................................................................................TATTTCAAGGGTCGCCG-TGC-------AGCT------------------ACCA...............................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................ATTAGTTATTAGACCAG---------------------CGACCGATC..............................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................ATCTGTGTTGGCAGTCATTAGTTATTAGAA...............................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................TTAGTTATTAGACCAG---------------------CGACCGAT...............................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................TTAGA----------------ATCGTCAGGAT-----------------------------------------CCA--TTTTAAAGA-------------------------------------------------------------..................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................ATTTCAAGGGTCGCCG-TGC-------AGC......................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.................................................................................................................................TAAAAGC-GAA---TATTTCAAGGG..........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................AAACC-----CCG--ATCTGTGTTGGCA................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................................................................................................................................................................................CACA---GTGCATCTCA----------------------------TTTTTA...................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................AAAG-------GA--AAACC-----CCG--ATCTGTGTTGGC.................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GACCGATCAAT----CCACA---GTGCATCATT----------------------------.........................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................ATCAAT----CCACA---GTGCATCTC......................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................TTCAAGTGCTAAAA-GTAAAAAAG-------GA--............................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................................................TCA----------------------------TTTTTAGA----------------ATCGTCAGG........................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................A---TATTTCAAGGGTCGCCG-TGC-------AGCT------------------A..................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................................................................................................................................................................................................A----------------------------TTTTTAGA----------------ATCGTCAGGAT-----------------------------------------CCA--TTTT....................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................A---GTGCATCTCA----------------------------TTTTTAGA----------------ATCGTCAG.........................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................A--TTTTAAAGA-------------------------------------------------------------TTGTACAGT.........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................A---GTGCATCTCA----------------------------TTTTTAGA----------------ATCGTC...........................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.............................................................ATAA--TTAGGATATTAAGGC-CG------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................CCCG-T----------------------TGAAGAGCATAA--TTAGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
........A-AGA----A-GGTCTCCCCG-T----------------------TGAAGAGCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................CAG---------------------CGACCGATCAAT----CCACA---GTGC...........................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAAAGA-------------------------------------------------------------TTGTACAGTTTCGT--TG2511.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................ACC-----CCG--ATCTGTGTTGGCAGTCA............................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TAAAAAAG-------GA--AAACC-----CCG--ATCTGTGTT....................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................ATTAAGGC-CG------TAACTA-------ACTAA-AC---------ACT-A......................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TCAGGAT-----------------------------------------CCA--TTTTAAAGA-------------------------------------------------------------TT................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GACCGATCAAT----CCACA---GTGCATCTCA----------------------------.........................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................................G-TGC-------AGCT------------------ACCATTCAAGTGC......................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................ACTA-------ACTAA-AC---------ACT-ATACTAAAAGC-GA.........................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................GCATCTCA----------------------------TTTTTAGA----------------ATCGTCAGGAT-----------------------------------------.............................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TAGA----------------ATCGTCAGGAT-----------------------------------------CCA--T.......................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TCAGGAT-----------------------------------------CCA--TTTTAAAGA-------------------------------------------------------------TTGTACAG..........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TCAAT----CCACA---GTGCATCTCA----------------------------TTTTTT...................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TAGA----------------ATCGTCAGGAT-----------------------------------------CCA--TTTTAAAGA-------------------------------------------------------------T.................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................AAGTGCTAAAA-GTAAAAAAG-------G...............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TGGCAGTCATTAGTTATTAGACCAG---------------------C......................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
droEre2
TT--ACGAA-AGG----A-GGT--CCCCG-TTT----------AAAGTGATTTTGAAAAGCATAA--TTAGGATAGTAAGGC-CG------TAACTA-------ACTAA-AC---------ACT-ATACTAAAAGC-AAA---TATTTCAAGTGTCGCAGAAGC-------AGCT------------------ACCTTTAAAGTGCTAAAT-GAG-------------GAA----CC-----CAG--ATCT--GTAGGCAGTCATTAGTTATTAGACCAG---------------------CGATCGATCAAT----CCACA---GTGCATCTCA----------------------------TTTTTAGA----------------ATCGTCAGGCT-----------------------------------------CCA--TTTTAAAGA-------------------------------------------------------------TTGTACAGTTTCGT--TGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................................................................................................................................................................................................................................................................TGCATCTCA----------------------------TTTTTAGA----------------ATCGTCA..........................................................................................................................................24117.001700000017
....................................................................................................................................................................................................................GAG-------------GAA----CC-----CAG--ATCT--GTAGGC.................................................................................................................................................................................................................................................................................2112.0020000110
..............................................................................................................................................................................T------------------ACCTTTAAAGTGCTAAAT-GAG-------------GAA----CC-----CAG--A............................................................................................................................................................................................................................................................................................3112.0020000002
........................................................AAAGCATAA--TTAGGATAGTAAGGC-C................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000110
......................................................................................................................................................................................................................................A----CC-----CAG--ATCT--GTAGGCAGT..............................................................................................................................................................................................................................................................................1911.0010000100
....................................................................................................................................................................................................................................................................GTCATTAGTTATTAGACCAG---------------------CGATCG.................................................................................................................................................................................................................................2611.0011000000
..........................................................................................................................................................................................................GTGCTAAAT-GAG-------------GAA----CC-----CAG--ATCT--GTA....................................................................................................................................................................................................................................................................................2711.0010000010
..............................................................................AGGC-CG------TAACTA-------ACTAA-AC---------ACT-ATACT..................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
......................................................................................................................................................................................................................................A----CC-----CAG--ATCT--GTAGGCAGTC.............................................................................................................................................................................................................................................................................2011.0010000100
........................................................................ATAGTAAGGC-CG------TAACTA-------ACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
....................................................................................................................................................................................................................GAG-------------GAA----CC-----CAG--ATCT--GTAGGCAGTC.............................................................................................................................................................................................................................................................................2511.0010000010
.................................................ATTTTGAAAAGCATAA--TTAGGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
..........................................................................................................................................................................................................................................................................AGTTATTAGACCAG---------------------CGATCGATC..............................................................................................................................................................................................................................2311.0010000100
...................................................................................................................................................................................................................................................................................................................ATCAAT----CCACA---GTGCATCT.......................................................................................................................................................................................................1911.0010000010
........................................................................................................................................................................................................................................................................TTAGTTATTAGACCAG---------------------CGATC..................................................................................................................................................................................................................................2111.0011000000
..................................................TTTTGAAAAGCATAA--TTAGGATAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
....................................................................................................................................................................................................TTTAAAGTGCTAAAT-GAG-------------GAA----C........................................................................................................................................................................................................................................................................................................2211.0010000100
.....................................................................................................................................................................................................................................................................................CAG---------------------CGATCGATCAAT----CCACA---GTGC...........................................................................................................................................................................................................2411.0010000010
........................................................................................................................................................................................................AAGTGCTAAAT-GAG-------------GAA----CC-----CAG--ATCT--GT.....................................................................................................................................................................................................................................................................................2811.0010000100
...................................................................................................................................................................................................CTTTAAAGTGCTAAAT-GAG-------------GAA----CC-----CA................................................................................................................................................................................................................................................................................................2611.0010000100
..................................................................................................................................................TTCAAGTGTCGCAGAAGC-------AGC......................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
..................................................................................................................................AAAAGC-AAA---TATTTCAAGTGTCGCAGA...................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
............................................................................................................................................................................................................................................................................TTATTAGACCAG---------------------CGATCGATCAAT----CCAC...................................................................................................................................................................................................................2811.0011000000
................................T----------AAAGTGATTTTGAAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
....................................................................................................................................................................................................................................GAA----CC-----CAG--ATCT--GTAGGCAGT..............................................................................................................................................................................................................................................................................2111.0010000100
....................................................................................................................................................................................................TTTAAAGTGCTAAAT-GAG-------------GAA----CC-----CAG--AA...........................................................................................................................................................................................................................................................................................2811.0011000000
..........................................................................AGTAAGGC-CG------TAACTA-------ACTA........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
.........................................................................................................................................................................................................................................................................TAGTTATTAGACCAG---------------------CGATCGATCAAT----C......................................................................................................................................................................................................................2811.0010100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGA-------------------------------------------------------------TTGTACAGTTTCGT--T.2011.0010000010
...........................................................................................................................................................................AGCT------------------ACCTTTAAAGTGCTAAAT-GAG-------------GA..............................................................................................................................................................................................................................................................................................................2711.0011000000
.............................................................................................................................................................................................................................................................................................................................................CA----------------------------TTTTTAGA----------------ATCGTCAGG........................................................................................................................................1911.0010000100
..........................................................................AGTAAGGC-CG------TAACTA-------ACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
..................................................................................................................................AAAAGC-AAA---TATTTCAAGTGTC........................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
....................................................................................................................................................................................................................................................................................................................TCAAT----CCACA---GTGCATCTCA----------------------------TTTT.....................................................................................................................................................................2411.0011000000
droYak3
TT--ACGAA-AGA----AGGGT--CCCCG-TTT----------AAAGTGATTTTGAAAAGCATAA--TTAGGATAGTAAGGC-CG------TAACTA-------ACAAA-AC---------ACT-ATACTAAAAGC-AAA---TATTTCAAGAGTTGCAGAAGC-------AACT------------------ACCATTAAAGTGCTAAAT-GAG-------------AAA----CC-----CAG--ATCT--GTAGGCAGTCATTAGTTATTAGACCAG---------------------CGATCGATCAAT----CCACA---GTGCATCTCA----------------------------TTTTTAGA----------------ATCGTCAGGCT-----------------------------------------CCA--TTTTAAAGA-------------------------------------------------------------TTGTACAGTTTCGT--TGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................AGCATAA--TTAGGATAGTAAGGC-CG------TA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2615.00500000000005
......................................................................................................................................................................................................................G-------------AAA----CC-----CAG--ATCT--GTAGGCAGT..............................................................................................................................................................................................................................................................................2213.00300000030000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAGA-------------------------------------------------------------TTGTACAGTTTCGT--..2112.00200000020000
.........................................................................................................................................................................................................................................................................TAGTTATTAGACCAG---------------------CGATCGAT...............................................................................................................................................................................................................................2311.00100000010000
.................................................................................................................................................................................................................AT-GAG-------------AAA----CC-----CAG--ATCT--GTAGGCAGT..............................................................................................................................................................................................................................................................................2611.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAAAGA-------------------------------------------------------------TTGTACAGTTTCGT--T.2311.00100100000000
............................................................................................................................................................................................................................................................................................................................................TCA----------------------------TTTTTAGA----------------ATCGTCAGGCT-----------------------------------------CCA--TTT.....................................................................................2811.00100100000000
....................................................TTGAAAAGCATAA--TTAGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
........................................................................................................................................................................................................................................................TCT--GTAGGCAGTCATTAGTTATTAGACC..............................................................................................................................................................................................................................................................2811.00101000000000
............................................................................................................................................................GCAGAAGC-------AACT------------------ACCATTAAAGT........................................................................................................................................................................................................................................................................................................................................2311.00100000100000
...............................................................................................................................................................................................................................................................................TTAGACCAG---------------------CGATCGATCA.............................................................................................................................................................................................................................1911.00101000000000
.....................................................................................................................................................................................................................................AA----CC-----CAG--ATCT--GTAGGCAGT..............................................................................................................................................................................................................................................................................2011.00100000010000
.........................................................AAGCATAA--TTAGGATAGTAAGGC-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
.............................................................................................................................................................................CT------------------ACCATTAAAGTGCTAAAT-GA..............................................................................................................................................................................................................................................................................................................................2211.00101000000000
....................................................................................................................................................................................................................................AAA----CC-----CAG--ATCT--GTAGGCAGT..............................................................................................................................................................................................................................................................................2111.00110000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TCGTCAGGCT-----------------------------------------CCA--TTTTAAAGA-------------------------------------------------------------TTGT..............2611.00101000000000
...............................................................................................................................ACTAAAAGC-AAA---TATTTCAAGAGT.........................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
..............................................................................................................................................................................................................................................................................................................GATCGATCAAT----CCACA---GTGCATCT.......................................................................................................................................................................................................2411.00100000010000
........................................................................................................................................................................................................................................................................TTAGTTATTAGACCAG---------------------CGATCGATC..............................................................................................................................................................................................................................2511.00100000010000
..............................................................................................................................................................................................................................................................................ATTAGACCAG---------------------CGATCGATCAAT----.......................................................................................................................................................................................................................2211.00100000010000
..................................................TTTTGAAAAGCATAA--TTAGGATAGTAAGGC-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.00100000010000
.................................................................................................................................................TTTCAAGAGTTGCAGAAG.................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
..............................................................................................................AC---------ACT-ATACTAAAAGC-AAA---TATTTCAAGA...........................................................................................................................................................................................................................................................................................................................................................................................2911.00101000000000
......................................................................................................................................................................................................................................................................................AG---------------------CGATCGATCAAT----CCACA---GTGCAT.........................................................................................................................................................................................................2511.00100000010000
......................................................................................................................................................................................................................................................................CATTAGTTATTAGACCAG---------------------CGATC..................................................................................................................................................................................................................................2311.00100000010000
.......................................................AAAAGCATAA--TTAGGATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
......................................................................................................................................................................................................................G-------------AAA----CC-----CAG--ATCT--GTAGGC.................................................................................................................................................................................................................................................................................1911.00100000010000
.....................................................................................................................................................................................................................................AA----CC-----CAG--ATCT--GTAGGCAGTC.............................................................................................................................................................................................................................................................................2111.00101000000000
................................................................................................................................CTAAAAGC-AAA---TATTTCAAGAGTT........................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
......................................................................................................................................................................................................................G-------------AAA----CC-----CAG--ATCT--GTAGGCAGC..............................................................................................................................................................................................................................................................................2211.00110000000000
droEug1
TTA-ATGAA-AGA----GGGGT--CCCCG-TTT----------AAAGTGATTTTGAAAAGCATAA--TTAGGATGTTAAGGC-CG------TAACTA-------ACTAAAAC---------ACT-ATACTAAAAGC-AAA---TATTTTGGGAGTCGCAAGAAA-------AGCT------------------ACCATTAAAGTGCTAAAAAGAG-------------AAA----CG-----GAG--AACT--GTAGGCAGTCATTAGTTATTAGATCAG---------------------CGACCGATCAAT----TCAC----TTGCAACTCA----------------------------TATATAGA----------------ATCTTCAGGAG-----------------------------------------CCA--TTTTAAAAT-----------------------------------------------------------ATTTGTACAGTTT-----TGSizeHit CountTotal NormTotal
No Reads
droBia1
TA--TCGAA-AAGA---A-GGT--CCCCG-TTT----------AAAGTGATTTTGA-AAGCATAA--TTAGTGTGTTAAGGC-CG------TAACTA-------ACTAA-AC---------TCT-ATACTAAAAAC-AAA---TATTTCGAGA-------------------GCT------------------ACGATTAAAGTGCTAAAA-GTG-------------AAT----AG-----CAG--AACT--GTAGGCAGTCATTAGTTATTAGACCAG---------------------CGACCGATCAAC---TCCAC-----TGCACC-CA-------------CTAAAAAACCCAA--GTTATAGA----------------ATCTTCAGGCT-----------------------------------------CCA--TTTTAAAGA------------------------------------------------------------TTTGTACAGTTTCGT--TGSizeHit CountTotal NormTotal
No Reads
droTak1
TA--TCGAA-AGG----A-GGT--CCCCG-TTTAAACCCATTAAAAGTGATTTTGAAAAGCATAA--TTAGGATGTTAAGGC-CG------TAACTA-------ACTAA-AC---------ACT-ATACTAAAAGC-AAA---TATTTCGAGAGTCGCAGGAGC-------AGCT------------------ACCATTAAAGTGCTAGAA-GAG-------------GAA----CC-----CAGAAAACA--GTAGGCAGTCATTAGTTATTAGACCAG---------------------CGACCGATCAAT----CCAC----TAGCTCCCCA-------------C--------T----TTTTATAGA----------------ATCTTCAGGCC-----------------------------------------ACA--TTTTAGAGA-------------------------------------------------------------TTGTACAGTTTTGT--TGSizeHit CountTotal NormTotal
No Reads
droEle1
TA--TCGAA-AGGAAGGA-GGT--ACCCG-TTTAAAC---TTTAAAGTGATTTTGAAAAGCATAA--TTAGGATGTTAAGGC-CG------TAACTA-------ACTAA-ATAAAACAAACACT-ATACTGAAAGC-AAA---TATTTCGAGAGTCGCAGGAGC-------AGCT------------------ACCATTAAAGTGCTAAAA-GAG-------------AAA----CA-----CAG--AACT--GTAGGCAGTCATTAGTAATTAGATCAG---------------------CGACCGATCAAG----CCAC----TCGCAACCCG----------------------------TTCATTGA----------------ATCTTCAGGCT-----------------------------------------CCA--TTTTAGAGA-------------------------------------------------------------TTGTACAGTTTTGT--TGSizeHit CountTotal NormTotal
No Reads
droRho1
TA--TCGAA-AGGAAAGA-GTT--ACCCG-TTT----------AAAGTGATTTTGAAAAGCATAA--TTAGGATGTTAAGGG-CG------TAACTA-------ATTAA-AC---------ACT-ATACTAAAAGC-AAA---TATTTCGAGAGTCGCAGAAGC-------AGCT------------------ACCATTAAAGTGCTAAAA-GAG-------------GAA----CA-----CAG--AACT--GTAGACAGTCATTAGATATTAGACCAG---------------------CGACCGATCAAC----CCAC----TTGCAACCCA--------------------ACCC---GTTCATAGA----------------ATCTTCATGCT-----------------------------------------CCA--TTTTAAAGA-------------------------------------------------------------TTGTACAGTTTTGT--TGSizeHit CountTotal NormTotal
No Reads
droFic1
TA--TCGAA-AGG----A-TGT--CCCCG-TTT----------AAAGTGATTTTGAAAGGCATAA--TTAGGATGTTAAGAC-CG------TAACTA-------ACTAA-AC-----------T-CTACTAAAATC-AAA---TATTTCGAGAGTCGCAGAAAT-------AGCT------------------ACCATCAAAGTGCTAAAA-GAG-------------AAA--A-CTC---ACAG--AACT--GTAGGCAGTCATTAGTTATTAGATCAG---------------------CGACCGATCAA-------------------CTCA----------------------------TTTATAGA----------------ATCGTCAGGCTC----------------------------------------CCA--TTTTAAAGA-------------------------------------------------------------ATGTACAGTTTTGT--TGSizeHit CountTotal NormTotal
No Reads
droKik1
TA--T-GAATAGGATGCAGCGC--CCTCG-TTT----------AAAGTGATTTTGAAAAGCATAA--TTAGGATGTTAAGGC-CG------TAACTA-------ACTAA-AC---------ACAAATACTGAAAACAAAAGCCAATCCCAAAAAAAAAAAAAA-----------T------------------A-GAGTAAAGTGCTAAAA-GAG-------------AG-AAA-CAC---AGAG--AGCT--GTA----GTCATTAGGTATTAGACCAG---------------------CGACCGATCAATATTTGCAC----TGGCACCCTC---------------------CC----CGTCATAGAACCATAGGAACCTAGAAT---CAGGAT----------------------TAG----GAT-CGGCTCCTCCA--TTTTAAGAA-------------------------------------------------------------TTGTACAGTTGTTTTGTGSizeHit CountTotal NormTotal
No Reads
droAna3
TGTATCGAA-AGG----A-TGT--CCCCGAATT----------AAAGTGATTTTGGAAAGCATAA--TTAGAATGTTAAGGC-CG------TAACTA-------ACTAA-ACACAGTAAACAAT-ATACTAAA-TC-------TATTTCGAAAGTCGCAAAAGTTAAAAAAAGATACAAAATATTAATGGTGTAAACATAAAGTGCTAAAG-T-AAAAAAAATACAAGAAA----TT-----CAG--AACT--GTAGGCAGTCATTAGTTATTAGACCAG---------------------CGACCGATCAAG----CCAC----TCGCACCACA----------------------------TTTTT------------------------------------------------------------------------------TTAGGGA-TTCGCTCCAAGCTCCAGCGAACTCCCACCTACTTTCTC--------------------TCATGTACAGTTGAGTTTTGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
TGTATCGAA-AGG----A-TGT--CCCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
................................................................................................................................................ATTTCGAAAGTCGCAAAA..................................................................................................................................................................................................................................................................................................................................................................................1811.001000010
......................................................................................................................................................................................................................................................................................AG---------------------CGACCGATCAAG----CCAC----TC.............................................................................................................................................................................................................2011.001010000
...............................................TGATTTTGGAAAGCATAA--T................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
...ATCGAA-AGG----A-TGT--CCCCGAATT----------AAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
.......................................................................................................................................................................................................................................................................................G---------------------CGACCGATCAAG----CCAC----T..............................................................................................................................................................................................................1811.001000100
.........................................................................TGTTAAGGC-CG------TAACTA-------ACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
......................................................................................................................................................................................ATTAATGGTGTAAACATAAAGTGCTA....................................................................................................................................................................................................................................................................................................................................2611.001100000
...........................................................GCATAA--TTAGAATGTTAAGGC-CG------TAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
...........................................................................................................AA-ACACAGTAAACAAT-ATACC..................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...................................................TTTGGAAAGCATAA--TTAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000100
.....................................................................................................................................................................................................................................AA----TT-----CAG--AACT--GTAGGCAGT..............................................................................................................................................................................................................................................................................2011.001000010
....................................................................TAGAATGTTAAGGC-CG------TAACTA-------ACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
...............................................................................................................................................................................................................................ACAAGAAA----TT-----CAG--AACT--GTAGGCAGTC.............................................................................................................................................................................................................................................................................2711.001100000
......................................................................................................................................................................................................................................................................................AG---------------------CGACCGATCAAG----CCAC----...............................................................................................................................................................................................................1811.001010000
..........AGG----A-TGT--CCCCGAATT----------AAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
droBip1
TGTATCGAA-AGG----A-TGT--CCCCGAATT----------AAAGTGATTTTGGAAAGCATAA--TTAGGACTTTAAGGC-CG------TAACTAAACTAAAACTAA-AAACAGTAAACAAT-ATACTAA-AGC-AAA-TCTATTTCAAAAAAAAACGAAGC-------AA------AATATTAATGGTGTAAACATAAAGTGCTAAAA-TAC-AAGA------AGAAA----TT-----GAG--AACT--CTAGGCAGTCATTAGTTAGTAGACCAG---------------------CGACCGATCAAG----CCACTTACTTGCACCACA----------------------------TTTGTAGA----------------ATCGC------------------------------------------------GA--TTTG-TAGA---------------------ATTCTTAGTTACTTTCTC--------------------TCATGTACAGTTGAGTTTTGSizeHit CountTotal NormTotal
No Reads
dp5
TAT-TCGAG-ACGAAGCC-AGC--CCCCA-TAT----------AAAGTGATTTCTAAAACCATATTTTTAGGACATTAAGACCCG------TAACTA-------ACTAC-AC--ACTAATGAAT-ATACTAAAAGCGAAA---TATTTCCAAAGTA--------------------------------------AAAGTCAAGTGCTAAAG-G-G-------------AAA----CCCAGAACAG--AACT--GTAGGCAGTCATTAGCTAGTAGATCAT---------------------TGGAA---C------------------------------------------AAAAA-CAAT-CTTTTAAA----------------CTCGTAAAGCTCACTTTTTATAGTTCTCGCTACTAAAGCTGTTCTCGCTACTC-AGTTTTTAAAGATTTCGCTACT-TCTCAAGCG------------TTTTTTT--------------------TTGTGTACAGATGTGT--TTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................................................................................................................................................................................................................T-CTTTTAAA----------------CTCGTAAAGCTCACTTT................................................................................................................................2612.0020000000020
...............................................................................................................................................................................................................................................................................................................................................................................TAAA----------------CTCGTAAAGCTCACTTTTTA.............................................................................................................................2411.0010000000100
..........................................................................................................................................................TA--------------------------------------AAAGTCAAGTGCTAAAG-G-G-------------A...............................................................................................................................................................................................................................................................................................................2211.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGCTACTC-AGTTTTTAAAG................................................................................2111.0010010000000
..................................................................................................................................................................................................AAAGTCAAGTGCTAAAG-G-G-------------A...............................................................................................................................................................................................................................................................................................................2011.0010100000000
........................................................................................................................................................................................................AAGTGCTAAAG-G-G-------------AAA----CCCAG....................................................................................................................................................................................................................................................................................................2111.0010100000000
.................................................................................................................................................................................................................................................................................AGATCAT---------------------TGGAA---C------------------------------------------AAAAA-C.............................................................................................................................................................................1911.0010100000000
..........................................................................................................................................................TA--------------------------------------AAAGTCAAGTGCTAAAG-G-G-------------AAA----CCC......................................................................................................................................................................................................................................................................................................2711.0010100000000
.............................................................................................................................................................................................................................................................GTAGGCAGTCATTAGCTA.....................................................................................................................................................................................................................................................................1811.0010100000000
......................................................................................................................................................................................................................G-------------AAA----CCCAGAACAG--AACT--GTAGGC.................................................................................................................................................................................................................................................................................2411.0010100000000
............................................................................................................................................................................................................................................................................CTAGTAGATCAT---------------------TGGAA---C------------------------------------------A...................................................................................................................................................................................1911.0010100000000
.........................................................................................................................................................GTA--------------------------------------AAAGTCAAGTGCTAAAG-G-G-------------A...............................................................................................................................................................................................................................................................................................................2311.0010000001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTCGCTACTAAAGCTGTTCT....................................................................................................2311.0010100000000
.............................................................................................................................ATACTAAAAGCGAAA---TATTTCCAAAGT.........................................................................................................................................................................................................................................................................................................................................................................................2711.0010010000000
TAT-TCGAG-ACGAAGCC-AGC--............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..............................................................................................................................................................................................................TAAAG-G-G-------------AAA----CCCAGAACA................................................................................................................................................................................................................................................................................................1911.0010100000000
...............................................................................................................................................................................................................................................................................GTAGATCAT---------------------TGGAA---C------------------------------------------AAAA................................................................................................................................................................................1911.0010100000000
.........................................................................CATTAAGACCCG------TAACTA-------ACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
........................................................................................................................................................AGTA--------------------------------------AAAGTCAAGTGCTAAAG-G-G-------------A...............................................................................................................................................................................................................................................................................................................2411.0010100000000
....................................................................................................................................................................................................................................AAA----CCCAGAACAG--AACT--GTAGGCAGTC.............................................................................................................................................................................................................................................................................2711.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-AGTTTTTAAAGATTTCGCTACT-....................................................................2411.0010100000000
............................................................................................................................................................................................................................................CCAGAACAG--AACT--GTAGGCAGTCATT..........................................................................................................................................................................................................................................................................2611.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TACTAAAGCTGTTCTCGCTACTC-AGT........................................................................................2611.0010100000000
..........................................................................................................TAC-AC--ACTAATGAAT-ATACTAAAAGCG...........................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCTACTC-AGTTTTTAAAGATTTCGC.........................................................................2711.0010100000000
.............................................................ATATTTTTAGGACATTAAGACCCG------T........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010000000
...............................................................................GACCCG------TAACTA-------ACTAC-AC--ACT...............................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..................................................................................................................................................................................................................................................................CAGTCATTAGCTAGTAGATCAT---------------------TGGAA---C------------------------------------------....................................................................................................................................................................................2811.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACT-TCTCAAGCG------------TTTTTTT--------------------TTGTGT..............2611.0010000001000
.....................................................................................................................................................................................................................................AA----CCCAGAACAG--AACT--GTA....................................................................................................................................................................................................................................................................................1911.0010100000000
...........................................................................................................................................................................................................TGCTAAAG-G-G-------------AAA----CCCAGAACAG--AACT--.......................................................................................................................................................................................................................................................................................2711.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GCTACTAAAGCTGTTCTCGCTAC..............................................................................................2311.0010100000000
..........................................................................................................................................................................................................................................................................AGCTAGTAGATCAT---------------------TGGAA---C------------------------------------------AAAA................................................................................................................................................................................2411.0010000001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTCGCTACTAAAGCTGTTCTCG..................................................................................................2511.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAAAGCTGTTCTCGCTACTC-A..........................................................................................2311.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................TTAAA----------------CTCGTAAAGCTCACTT.................................................................................................................................2111.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................AAGCTCACTTTTTATAGTTCTCG....................................................................................................................2311.0010100000000
droPer2
TAT-TCGAG-ACGAAGCC-AGC--CCCCA-TAT----------AAAGTGATTTCTAAAACCATATTTTTAGGACATTAAGACCCG------TAACTA-------ACTAC-AC--ACTAATGAAT-ATACTAAAAGCGAAA---TATTTCCAAAGTA--------------------------------------AAAGTCAAGTGCTAAAG-G-G-------------AAA----CCCAAAACAG--AACT--GTAGGCAGTCATTAGCTAGTAGATCAT---------------------TGGAA---C------------------------------------------AAAAA-CAAT-CTTTTAAA----------------CTCGTAAAGCTCACTTTTTATAGTTCTCGCTACTAAAGCTGTTCTCGCTACTC-AGTTTTTAAAGATTTCGCTACT-TCTCAAGCG----------TTTTTTTTT--------------------TTGTGTACAGATGTGT--TTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................................................................................................................................GTA--------------------------------------AAAGTCAAGTGCTAAAG-G-..............................................................................................................................................................................................................................................................................................................................2113.003001002
.....................................................................................................................................................................................................................................AA----CCCAAAACAG--AACT--GTAGGCAGT..............................................................................................................................................................................................................................................................................2512.002200000
...................................................................................................................................................................................................................................................AG--AACT--GTAGGCAGTCATTAGCTAGT...................................................................................................................................................................................................................................................................2612.002110000
............................................................................................................................................................................................................................................................................................................................................................................TTTTAAA----------------CTCGTAAAGCTCAC...................................................................................................................................2112.002200000
.....................................................................................................................................................................................................................................AA----CCCAAAACAG--AACT--GTAGGCAGG..............................................................................................................................................................................................................................................................................2511.001100000
.............................................................................................................................................................................................................................................CAAAACAG--AACT--GTAGGCAGTC.............................................................................................................................................................................................................................................................................2211.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................CGCTACTAAAGCTGTTCTCGCT................................................................................................2211.001100000
.......................................................................................................................................................................................................CAAGTGCTAAAG-G-G-------------AAA----CC.......................................................................................................................................................................................................................................................................................................1911.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................GTAAAGCTCACTTTTTATAGT.........................................................................................................................2111.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G----------TTTTTTTTT--------------------TTGTGTACAGATGTGT--..2611.001000001
.........................................................AACCATATTTTTAGGACATTAAGACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
................................................................................................................................................................................................................................................AACAG--AACT--GTAGGCAGTCATTAGCT......................................................................................................................................................................................................................................................................2611.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAAGCTGTTCTCGCTACTC-...........................................................................................2111.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------------------TTGTGTACAGATGTGT--TT1911.001010000
..................................................................TTTAGGACATTAAGACCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.........................................................AACCATATTTTTAGGACATTAAGACCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
..........................................................................................................................................................TA--------------------------------------AAAGTCAAGTGCTAAAG-G-G-------------AAA----CCC......................................................................................................................................................................................................................................................................................................2711.001000001
....................................................................................................................................................................................................................................................G--AACT--GTAGGCAGTCATTAGCTAGT...................................................................................................................................................................................................................................................................2511.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TCGCTACTAAAGCTGTTCTCGCTAC..............................................................................................2511.001010000
.........................................................................CATTAAGACCCG------TAACTA-------ACTAC-AC--ACT...............................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
droVir3
TC--GTC---AGCAAGTA-ACT--CCCCA-TTT----------AAAGTGATTTCTAAAAGCATAA--TTAAGAC--TAAGC--CGAGCGCATA--CAACCT--AATTAA-AAACAGCAAAA-CG-TGAATAAAAAC-AAA-------GCAAATGTCGAAA-AAC-------GATT------------------ACATTAAAAGTGCTAAAA-TGG-------------AAA----CT-----AAA--AACA--GTAGGCAGT-------TTTTAGACCAGGGCGGACGGGACGGGACGGGACGACGGACAGAC----GGAAA---TTGCATTACATCTATAGCATATAT---TAAAGCAAA--TTTTTATA----------------AATA-----AC----------------------TAA----GCG---------CCA--TTTTTTCAT-------------------------------ATT-TC-TATATATACAATAATGTATAATTTTATACGTTTGTGT--TCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................A--TTAAGAC--TAAGC--CGAGCGCATA--C....................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002020000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................GG-------------AAA----CT-----AAA--AACA--GTAGGC.................................................................................................................................................................................................................................................................................2012.002002000000000000000000000000000000000000000000000000000000000000
....................................................................TAAGAC--TAAGC--CGAGCGCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATAATGTATAATTTTAT..............1911.001000000000000000000000000100000000000000000000000000000000000000
.............................................................ATAA--TTAAGAC--TAAGC--CGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
.........................................................................................................................................AAA-------GCAAATGTCGAAA-AAC-------GATT------------------ACAT...............................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................CAGGGCGGACGGGACGGGACGGGACG.....................................................................................................................................................................................................................................2611.001100000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................GGCGGACGGGACGGGACGG.........................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..............................................................TAA--TTAAGAC--TAAGC--CGAGCGCATA--CA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000100
.......................................................................................................................................................................................................................................................................................................ACGGGACGACGGACA..............................................................................................................................................................................................................................1511.001000000000000000000000000000000000000000000000000000000000100000
....................................................................TAAGAC--TAAGC--CGAGCGCATA--CA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................GCTAAAA-TGG-------------AAA----CT-----AAA--AACA--GTAGG..................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
............................................................................TAAGC--CGAGCGCATA--CAACCT--AATTAA-......................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................A-----AC----------------------TAA----GCG---------CCA--TTTTTTCAT-------------------------------ATT-............................................2411.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................GCGGACGGGACGGGACGGGAT......................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................GACCAGGGCGGACGGGACGG..............................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................................................................GGACAGAC----GGAAA---TTGCATTAC......................................................................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................AA--AACA--GTAGGCAGT-------TTTT...................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000010000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GACGGACAGAC----GGAAA---TTGCATTACATC...................................................................................................................................................................................................2811.001100000000000000000000000000000000000000000000000000000000000000
................................................................................................................................ATAAAAAC-AAA-------GCAAATGTCGA......................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.............................................................ATAA--TTAAGAC--TAAGC--CGAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................AAAAAC-AAA-------GCAAATGTCGAA.....................................................................................................................................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................TAA-AAACAGCAAAA-CG-TGAATAAAAA.............................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................AACA--GTAGGCAGT-------TTTTAGAC...............................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................CATTACATCTATAGCATATAT---....................................................................................................................................................................................2111.001000000000001000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TTTTATA----------------AATA-----AC----------------------TAA----GCG---------C............................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................................................................................GACGGGACGACGGACAGAC----GGAAA---T..............................................................................................................................................................................................................2511.001000000001000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................GGCGGACGGGACGGGACGGGAT......................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................AGCAAAA-CG-TGAATAAAAAC-AA.........................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................GGACAGAC----GGAAA---TTGCA..........................................................................................................................................................................................................1811.001000000000100000000000000000000000000000000000000000000000000000
......................................................................................................................AAA-CG-TGAATAAAAAC-AAA-------GC...............................................................................................................................................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................AAA-TGG-------------AAA----CT-----AAA--AACA--GTA....................................................................................................................................................................................................................................................................................2111.001000000000000000000000001000000000000000000000000000000000000000
.C--GTC---AGCAAGTA-ACT--CCCCA-......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................G-------------AAA----CT-----AAA--AACA--GTAGGC.................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................CG-TGAATAAAAAC-AAA-------GCAAATGTCGAA.....................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................ATATAT---TAAAGCAAA--TTTTT....................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................GTGCTAAAA-TGG-------------AAA----CT-----AAA--.............................................................................................................................................................................................................................................................................................2011.001000000000000000000000010000000000000000000000000000000000000000
...............................TT----------AAAGTGATTTCTAAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................GCATTACATCTATAGCATATAT---TAAAGCA.............................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................A-------GCAAATGTCGAAA-AAC-------GATT------------------ACAT...............................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................AACCT--AATTAA-AAACAGCAAAA-CG-T......................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................GGACGGGACGGGACGGGAC......................................................................................................................................................................................................................................1920.501001000000000000000000000000000000000000000000000000000000000000
droMoj3
TT--G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
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Generated: 05/18/2015 at 10:20 PM