ID:dsi_21826 |
Coordinate:3r:4392652-4392717 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [3r_4392528_4392651_+]; CDS [3r_4392528_4392651_+]; CDS [3r_4392718_4392872_+]; exon [3r_4392718_4392872_+]; intron [3r_4392652_4392717_+]
No Repeatable elements found
| ##################################################------------------------------------------------------------------################################################## GAAGAACCGCCTGGATCGGTGGGATGTTCCTGATTACAAAAACACATTGGGTAAGTACTACTTCTTTATAAGAACTACTGAATGAAATGAAATGAATGTTCAATGTCATTTCCTAGTTGATGCACACACGCCAGCCAGTCTGCTTAAGCTGTGGTACCGAGAACTC **************************************************.......((........................(((((((...((....))....)))))))..))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | O001 Testis |
GSM343915 embryo |
SRR553486 Makindu_3 day-old ovaries |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................................GCTTAAGCTGTGGTACCGA...... | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ..........................................................................................................................CACACTCGCTAGCCAGTCTGC....................... | 21 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| .................................................................................................................................................AAGCTGTGGTCCCGA...... | 15 | 1 | 3 | 0.33 | 1 | 0 | 0 | 1 | 0 |
| ......CCGCCTGGATCGTTGTG............................................................................................................................................... | 17 | 2 | 13 | 0.08 | 1 | 0 | 0 | 1 | 0 |
| ......................................................................................................................GAAGCACACACGCCA................................. | 15 | 1 | 13 | 0.08 | 1 | 0 | 0 | 0 | 1 |
| ..........................................................TATTTCTTTATAAGAAC........................................................................................... | 17 | 1 | 17 | 0.06 | 1 | 0 | 0 | 0 | 1 |
| ............................................................................................................................................TCCTTAGGCTGGGGTACC........ | 18 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 |
|
CTTCTTGGCGGACCTAGCCACCCTACAAGGACTAATGTTTTTGTGTAACCCATTCATGATGAAGAAATATTCTTGATGACTTACTTTACTTTACTTACAAGTTACAGTAAAGGATCAACTACGTGTGTGCGGTCGGTCAGACGAATTCGACACCATGGCTCTTGAG
**************************************************.......((........................(((((((...((....))....)))))))..))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR902009 testis |
SRR553485 Chicharo_3 day-old ovaries |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|
| ...........................................................................................................................TTTGTGCGGTCGGTCAGAC........................ | 19 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................CAAGTTACAGTAAGGGA.................................................... | 17 | 1 | 2 | 0.50 | 1 | 0 | 1 | 0 |
| .....................................................................................................................ACTACGTGTGTCGGGTCG............................... | 18 | 2 | 8 | 0.13 | 1 | 0 | 0 | 1 |
| ...........................................................TAAAGAAATATTCTTGA.......................................................................................... | 17 | 1 | 19 | 0.05 | 1 | 0 | 0 | 1 |
| .................................AATGTTGTTGTGGAACC.................................................................................................................... | 17 | 2 | 20 | 0.05 | 1 | 0 | 1 | 0 |
Generated: 04/24/2015 at 05:11 AM