ID:dsi_21749 |
Coordinate:3r:17638199-17638348 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
intergenic
No Repeatable elements found
|
AAGTTTTGTGTGCAACGTGGCGTATAATAATATTGTGTTGCAACCATTCTGCTGGCTCTGCACATTTTTCGGTCGCTCGCAAAAAGTTTTTAAAGTTCCTCCGCCTTTCCAGTGCTTTCTTCTCTCCTATTTTTCCCAACTAATCTTCAAACTAATCCTTACTTTGCGGCTGCTAAATTTGGTTTATTCCCATCTTGCAGACGATACGTACATGTACGACGAGGCGCTGAGAACGGGCGGCGGTATGGGC
**************************************************(((((....((.((..(((.(((.((.((((..((((......((((....................................................)))).......)))))))))).))))))..))))......)))....))..************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553487 NRT_0-2 hours eggs |
SRR553486 Makindu_3 day-old ovaries |
GSM343915 embryo |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................................................................................TACGACGAGGCGCTGAGAACGGGC............ | 24 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ........................................................................................................................................................................................................................CGACGAGGCGCTGAGAACG............... | 19 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| .......................................................................................................................................................................................................................ACGAAGGGGCGCTCAGAACGG.............. | 21 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 |
| ............................................................................................................CCAGTATTTTCCTCTCTCCTAT........................................................................................................................ | 22 | 3 | 2 | 0.50 | 1 | 0 | 0 | 1 | 0 |
| ....................................................................................................................................................................................................................TGTACTACGCGGCGCT...................... | 16 | 2 | 18 | 0.06 | 1 | 0 | 0 | 0 | 1 |
|
TTCAAAACACACGTTGCACCGCATATTATTATAACACAACGTTGGTAAGACGACCGAGACGTGTAAAAAGCCAGCGAGCGTTTTTCAAAAATTTCAAGGAGGCGGAAAGGTCACGAAAGAAGAGAGGATAAAAAGGGTTGATTAGAAGTTTGATTAGGAATGAAACGCCGACGATTTAAACCAAATAAGGGTAGAACGTCTGCTATGCATGTACATGCTGCTCCGCGACTCTTGCCCGCCGCCATACCCG
**************************************************(((((....((.((..(((.(((.((.((((..((((......((((....................................................)))).......)))))))))).))))))..))))......)))....))..************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR902009 testis |
M024 male body |
SRR618934 dsim w501 ovaries |
SRR553488 RT_0-2 hours eggs |
SRR553486 Makindu_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................ATATAAAGGGTTGATGAGAAG...................................................................................................... | 21 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 |
| .........................................................................................................................GAGTGGATAGAAAGGGATGA............................................................................................................. | 20 | 3 | 4 | 0.25 | 1 | 0 | 1 | 0 | 0 | 0 |
| .................................................................................................................................AAAAAGGGGTGATTAGTAGGT.................................................................................................... | 21 | 3 | 4 | 0.25 | 1 | 0 | 0 | 1 | 0 | 0 |
| ...............................................................................................................................................AGAGGTTTGAGTAGGAAT......................................................................................... | 18 | 2 | 5 | 0.20 | 1 | 0 | 1 | 0 | 0 | 0 |
| ...................................................................................................................................................................................................TCGTCTGCTATGGATGT...................................... | 17 | 2 | 7 | 0.14 | 1 | 0 | 0 | 0 | 1 | 0 |
| .......................................................................................AAAATTTCAAGGCGACGG................................................................................................................................................. | 18 | 2 | 12 | 0.08 | 1 | 0 | 0 | 0 | 0 | 1 |
| ...................................................................................................................................................................................................TCGTCTGCTATGGATG....................................... | 16 | 2 | 19 | 0.05 | 1 | 0 | 0 | 0 | 1 | 0 |
| .....................................................................................................................................................................................................................................TCTTGCCCGGCGCTAT..... | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 | 0 |
Generated: 04/24/2015 at 12:17 AM