ID:

dsi_21736

 Coordinate:

4:47895-48117 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-31.0 -30.9 -30.9

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

ACTTATTAGTTGAAGAAAAGTCTAGCTTAATAGATTTAACTGAAAGTGAGGTAACGAAAATATTTTAGTATTCATACAAAACTAAACAACTTTTCTTTTGGCTTTAATCAATATGTTTTTGGATTGAAAATGGTTTTTCATATTTGGAAAATATAATTTAAAATGTTTTCTATTAATAAATGTATAATTCCAAGATTTGAATATTGCTAATATGTGTGCTACGTCGTATATGAACATAAATATGGTTTAAATTTGTTTTTTCTTTGTGCATAGGAAAAGGGTCACAAAATTTCAAGGCCGGACCACAGCCCTGTTTTTAGTAA
**************************************************.....(((((((((((((........(((((..(((....)))..)))))...........(((((((((.((.((((((....))))))...)).)))))))))..))))))))))))).........((((((((.....((((((((((........(((((((((......))))....)))))......)))))))))).........))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total O002
Head
 M025
embryo
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 SRR618934
dsim w501 ovaries
 O001
Testis
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
..................................................................................................................................................................................................................................................................................................TTCAAGGCCGGACCACAG............... 18 0 1 7.00 7 6 0 0 0 0 1 0 0 0
........................................................................................................................................................................................................................TGCTACGTCGTATATGAACATAAA................................................................................... 24 0 1 2.00 2 0 0 2 0 0 0 0 0 0
................................................................................................................................................................................................................AATATGTGTGCTACGTCGTATATGA.......................................................................................... 25 0 1 2.00 2 0 2 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................TTCAAGGCCGGACCACAGC.............. 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................................................................................................CAAAATTTCAAGGCCGGAC.................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................TCAAGGCCGGACCACAGC.............. 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0
...........................................................................................................................................................................................................................................................................................ACAAAATTTCAAGGCCGGACC................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................TTTGAATATTGCTAATAT.............................................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................AAAATTTCAAGGCCGAA..................... 17 1 2 0.50 1 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................................TATGTGCTATGTCGTATA............................................................................................. 18 2 4 0.25 1 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................................................AATTTTGTTTTTTCTTTG......................................................... 18 1 9 0.11 1 0 0 0 0 0 1 0 0 0
..............................................................................................CTTTTGGCTTAGATCAAT................................................................................................................................................................................................................... 18 2 14 0.07 1 0 0 0 0 0 0 1 0 0
......................................................................................................................................................................................................................................................................TTTGTGCATGGGATAAG............................................ 17 2 15 0.07 1 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................................CTAATATGTGTGCGA...................................................................................................... 15 1 18 0.06 1 0 0 1 0 0 0 0 0 0
...................................................................................................................TTTTTGGTTTGAAAAT................................................................................................................................................................................................ 16 1 20 0.05 1 0 0 0 0 0 0 0 1 0
............................................................................................TTCTTTTGGCTTTAAA....................................................................................................................................................................................................................... 16 1 20 0.05 1 0 0 0 0 0 0 1 0 0
.......................................CTGAATGTGGGGTAAC............................................................................................................................................................................................................................................................................ 16 2 20 0.05 1 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

TGAATAATCAACTTCTTTTCAGATCGAATTATCTAAATTGACTTTCACTCCATTGCTTTTATAAAATCATAAGTATGTTTTGATTTGTTGAAAAGAAAACCGAAATTAGTTATACAAAAACCTAACTTTTACCAAAAAGTATAAACCTTTTATATTAAATTTTACAAAAGATAATTATTTACATATTAAGGTTCTAAACTTATAACGATTATACACACGATGCAGCATATACTTGTATTTATACCAAATTTAAACAAAAAAGAAACACGTATCCTTTTCCCAGTGTTTTAAAGTTCCGGCCTGGTGTCGGGACAAAAATCATT
**************************************************.....(((((((((((((........(((((..(((....)))..)))))...........(((((((((.((.((((((....))))))...)).)))))))))..))))))))))))).........((((((((.....((((((((((........(((((((((......))))....)))))......)))))))))).........))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M024
male body		 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
.........................................................................................................................................................................................................................................................................................AGTGATTGAAAGTTCGGGCC...................... 20 3 4 0.25 1 1 0 0 0 0
.................................................................................................................................................................................................................................................................................................................GTCTGGACAAAAATC... 15 1 4 0.25 1 0 1 0 0 0
...............................................................................................................................................................................................................................................................AAAAAAGAAACACGCAT................................................... 17 1 8 0.13 1 1 0 0 0 0
............................................................................................................................................................................................................................................................................................................CTAGTGGCAGGACAAAAAT.... 19 3 18 0.11 2 0 0 2 0 0
................................................................................................................................TTAGCAAAAAGAACAAACCTT.............................................................................................................................................................................. 21 3 19 0.05 1 0 0 0 1 0
......................................................................................................................................................................................................................................ACTTGTACTGATACCA............................................................................. 16 2 20 0.05 1 1 0 0 0 0
........................................................................................................................................................................................ATTAAGGTGCTAAAAGTATA....................................................................................................................... 20 3 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 4:47845-48167 + dsi_21736 ACTTATTAGTTGAAGAAAAGTCTAGCTTAATAGATTTAACTGAAAGTGAGGTAAC--GAAAAT----ATT---------------TT----------------AGTATTCATACAAA--------------------------------ACTAAACAACTTTT-CTTT------TGGC-TTTAATC---------------------------------AATATG-TTTTTGGATTGAAAATGGTTTT-----------TCATATTTGGAA--AATATAATTTAAAATGTTTT-------------------------------CTATTAATAAATGTA---TAATTCCAAGATTTGAATATTGCTAATATGTGTGC-TACGTCGTATA-TGAACA-TAAA----------------------------------------------------------------------------------TATGGTTTAA-A-TT-TGT---------------TTTT-TCTT--TGTGCATAGGAAAAGGGTCACAAAATTT---CAAGGCCGGACCACAGCCCTGTTT---TTAGT-AA
droSec2 scaffold_52:40601-40928 + ACTTATTAGTTGAAGAAAAGTCTAGCTTAATAGATTTAACTGAAAGTGAGGTAAT--GAAAAT----ATT---------------TT----------------AGTATTCATTCAAA--------------------------------ACTAAACAACTTTT-CTTT------TGGC-TTTAATC---------------------------------AATATG-TTTTTGGATTGAAAATGGTTTT-----------TCATATTTGGAA--AATATAATTTAAAATGTTTT-------------------------------CTATTAATAAATGTATCATCATTCCAAGATTTGAATATTGCTAATATGCGTGTCTATATCGTATA-TGAACA-TAAA----------------------------------------------------------------------------------TATGGTTTAA-A-TTTTTT---------------TTTT-TCTT--TGTGCATAGGAAAAGGGTCACAAAATTT---CAAGGCCGGACCACAGCCCTGTTT---TTAGT-AA
dm3 chr4:93171-93492 + ACTTATTAGTTGAAGAAAAGTCTAGCTTAATAGATTTAACTGAAAGTGAGGTAAT--AAAGAT----ATT---------------TA----------------AGTAATCACACAAA--------------------------------TCTAAACAACTTTT-CTACTTTT------------TC---------------------------------AATATG-TTTTTGGATTGAAAATTGTTTT-----------TCATATTTGGAAAAAATATAATTTCAAATGCTTT-------------------------------CCATTAATAAATTTA---TCATTCCAAGATTTGAATATTGCTAATATGTTTGTTTACATCGTATA-TGAACA-TAAA----------------------------------------------------------------------------------TATGGTTAAA-A-TTTGTT---------------TTTT-TCTT--TGTACATAGGAAAAGGGTCACAAAATTT---CAAGGCCGGACCACAGCCCTGTTT---TTAGT-AA
droEre2 scaffold_4512:1226548-1226887 - ACTTATTAGTTGAAGAAAAGTCGAGCTTAATAGACTTAACTGAAAGTGAGGTAAT--AAAGAT----TCT---------------TA----------------AGAATTCATTAAAA--------------------------------ACTAAACTATTT-T-CTTCCTCTTATGGCCCTTAAAC---------------------------------AATATATTTTTTGGACTGAAAATGTTTTTTTT---CT-ATTATTATTTGGGA--AGTATAATTTAAAATATGTT-------------------------------GCACACATAAATTAT---TCATTCCAAGATATAAATATTCCTAATATGTTTGTTTACATCGTATACCAAACA-TAAT----------------------------------------------------------------------------------TATGGTTTAA-A-TATAAT---------------TTTT-TCTT--TATACATAGGAAAAGGGTCAAAAAATTG---CTAGACCGGATCACAGCCCTGTTT---TTAGT-AA
droYak3 4:62560-62891 + ACTTATTAGTTGAAGAAAAGTCGAGCTTAATAGATTTAACTGAAAGTGAGGTAAT--AAATAC----ATT---------------TA----------------AGAATTCATTCAAA--------------------------------ACTA------TTTT-CTTCCTTTTATGAC-TTGAAAC------------------------------------TTT-TTTTTAAATTAAAAATGTGTTTATTAATTA-ATTCGTATTTGGAA--AGTATAATTTCAAATGTGCT-------------------------------GCGTACAAAAATTAT---TAATTCCAAGATATGAATGTTGCTAATATGTTTCTTTACATCGTAAA-TGAACA-TAAT----------------------------------------------------------------------------------TATGGTTTGA-A-TTTGAC---------------TTTT-TCTT--TGTACATAGGAAAAGGGTCAAAAAATTG---CAAGACCGGACCACAGCCCTGTTT---TTAGT-AA
droEug1 scf7180000406964:41021-41138 + ACTTATTAGTTGAAGAAAAGTCGAGCTTAATTGATTTAACTGAAAGTGAGGTAAT--TAAAAT----GAT---------------TA----------------AGAAATAATTAAAA--------------------------------CCCAAAATTATT------CCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATGTATTTGGTATAAATA---------------------------------------TG
droBia1 scf7180000302087:308361-308533 - ATATATTT--------------TAACTTATT---TTTAAGCGATAACGAGCTAT---------------------------------------------------------------AAAAGGTTGACGTCTTACCAAATATG----------------TTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA---TAACTTA--------------------------------------------------------------------------------------------------------------------TCA--ATATTAATATATTTGTTATTTAAAATTTTATT---------------TTTT-TCTT------TGTAGGAAAAGGGTCAAAAAATTG---CGCGGCCGGACCACAGTCCTGTTT---TTAGT-AA
droTak1 scf7180000415388:141463-141537 - AATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAT---------------TTTT-TCTT--TGTATATAGGAAAAGGGTCAAAAAATTG---CAAGGCCGGACCACAGCCCTGTTT---TTAGT-AA
droEle1 scf7180000491024:242885-243085 - CTAAA---------------------------------------AATGGCTTTTC--AAAATT----TTT---------------TG----------------AAACTTGCTTTAAA--------------------------------AATAAAAAAAAT-TATTTT-TGTTCTAGT------TC---------------------------------TTAGTT-TTTTGGAATTGAAAAAGGGTTG-----------TTTTAGTTAGCA--AATAC------------------------------------------------------------------------------------------------------------------------ATT----------------------------------------------------------------------------------AAT-TTAATT-C-GTTTTA---------------ATTT-AATTTTTATACCCTTCCAGAGGGTATTATAATTT---CA--GTCAGAAGTTTGCAACGCAG---TGAAA-GA
droRho1 scf7180000778598:13702-13940 - ACTTATTGGTTGAAGAGAAGTCAAGCTTGATAGATTTAACTGAAAGTGAGGTAAT--ATGAAT----CCT---------------TA----------------AAAAA------------------------------------------ATCA-TAACTTTT-GCTT------AACA-TTTGACA---------------------------------AAT------TGACTGGATTTATCGT-------------GAAAGAGAAACTGA--ATTTACGA--------------------GAAAGAAAAATTACAAATACTTCGTATTGATCAACTT-----------------------------------------------------------TAAA----------------------------------------------------------------------------------AA-------------TA---------------------ATACT--TCT-AAAATAAAATCGGCAGCAGAAT------------GAAAACGAGCAGTATTTAAATTAGT---
droFic1 scf7180000454086:312077-312256 - ACTTGTTAGTTGAAGAGAAGTCAAGCCTAATAGATTTAACTGAAAGTGAGGTAAT--ATAAAT----TTC---------------TT--------------AC--------------TCTTAATTTTAATTGA----------------ATTTAATAAACATA-ATTA------TAAT-TTTAACC---------------------------------AACAGC-TTATGATTTTAAGATTAGGGTT-----------TCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAT---AAAAAAAAATTAAAAATATTTTTT---ATTAT-TA
droKik1 scf7180000299191:5440-5756 + ACTTATTAGTTGAAGAAAAATCAAGCTTAATAGATTTAACGGAAAGTGAGGTAAG--ATAAACAAATCTATTATAACTTAAATAATGAAAGT---------------------------------------------------------------------------------------------TAACTGTTTATGTGTTTCAGATTCAGCTTTAATTAAAATT-T--------------------------------------------------------AAAA--------------AAACAGAACAC-------------TATTGATCTA--------------------------------------------------------------TAAATATTATAAAAAACAATACATAAACAGTGAACCGAGTATATATTAATTATTATAATATTTTTGCCTCAATTTGATAATATT---------GTA-A-TTTTTC---------------TTTT-TTTG--TGAATATAGGAAAAGAGTCAGAAAGTAG---CTAGACCCGACCACAGCCCGGTTT---TTAGT-AA
droAna3 scaffold_13335:2649851-2649925 - ATCTATTAGTCGAAGAAAAATCAAGCTTAATAGATTTAACGGAAAGTGAGGTGAG--AT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTT----ACCTT--TTAATA----------------------------------------------------------TA
droBip1 scf7180000394722:34436-34608 - TTTGGATT----------------------------------------------------------------------------------------CAATG----------------------------------------------------------------------------A-CT----------------------------------------------------------------TAT-----------TTATCACAACAA--AATATAACATTAAATGTTGTTCATATAGAA---------------------GTAAATATGTTTATA---TAGCTTATATTATTAAGTATAT------------------------------------------------------------------------------------------------------------------------------C------------CATTCTGT------ATTT-TTTT--TGT-TTTAGGACAAGGGCCAAAAAGCTG---TACGTCTGGAGCACAGCCCAGTTT---TTAGT-AA
dp5 Unknown_group_24:56742-56943 + ATCTGTTAGTTGAAGAGAAGTCCAGCTTAATAGATTTAACCGAAAGTGAGGTAAG--TCGCAG----CTT---------------CT--------------AT--------------ACATACTATTCGTCAATCTACATATATTAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCA-----------------------------------------------T--------------------------------------------------------------------TCA--TTCACAACATAATAATTTT-T--------------CTAT--TTATTT----ATTTT--TCTACTTAGGAAAAGGGCAACAAAACAG---TCAGGCCGGACCACAGCCCTGTTT---TTAGT-AA
droPer2 scaffold_51:150563-150765 + ATCTGTTAGTTGAAGAGAAGTCCAGCTTAATAGATTTAACCGAAAGTGAGGTAAG--TCGCAG----CTT---------------CT--------------AT--------------ACATACTATTCGTCAATCTACATATATTAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCA-----------------------------------------------T--------------------------------------------------------------------TCA--TTCACAACATAATTATTTTTC--------------CTAT--TTATTT----ATTTT--TCTACTTAGGAAAAGGGCAACAAAACAG---TCAGGCCGGACCACAGCCCTGTTT---TTAGT-AA
droWil2 scf2_1100000004943:921689-921776 - GATTTTAACT------------------------------------------------------------------------------------------------------------------------------------------------------TAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------TTAT--CACTAT----AATTT--ACCCCATAGGAAAAAGGTAGCAAAGCAG---CAAGGCCGGATCACAGTCCTGTTT---TCAGT-AA
droVir3 scaffold_13052:681650-681785 - ACCTTTTAGTCGAAGAAAAATCAAGCCTCATTGATTTAACAGAGAGTGAGGTATGATATGAAT--GCCCT-----------------------------------------TATAAA--------------------------------ACTCA--AACTTTG-A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTC-----------------------------------------------------------------------------------------------------CTCAAT--------------------------------------------------------------TAAAGGTGACTGCTTTGAA--------------------ATTGTCTTCTTT---TAACTGAA
droMoj3 scaffold_6473:4406461-4406641 - TATATAAT----------------------------------------------------------------------------------------TTTTA----------------------------------------------------------------------------T-TTTATAC---------------------------------AATT---TATAATTATTTAAATTATTAAT-----------ATACAGTAGTAA--ATTATATTATTTAATTTATT-------------------------------GTATATATGTATGTA---TAACTCTTATTAATGAATATTTTTAATATATGC--TTACCTCTGATAATATACA-TATT----------------------------------------------------------------------------------ATT-ATTATT-A-TTTTTA---------------GTAT-ACTT--TATAT-----------------------------------------------------------AT
droGri2 scaffold_14822:212338-212620 + ACCTTTTAGTCGAAGAGAAATCAAGCCTTATCGATTTAACAGAGAGTGAGGTAAA--TTATAC----TTG--------------TTGAAAATTAATTTCTT----------------------------------------TATTAAAT--T----ACATT------C----------------------------------------------------------ATTAATTATATATATTATAATA--------TTAATAGAATATTAA--ATTTAATT----------------------------------------------------------------------GAATTAAATTTATTAATTATGTATATTT-AATAGTAAT-CGAATA-TTAA----------------------------------------------------------------------------------ATTTAATAAA-T-TA-CATTTATTAT--TTATGT----ATTTT--TTT-AACAGGAAAAGGGCAGCAAAACAGTGACGAGGCCGGATCACAGTCCCGTAT---TCAGT-AA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACTTATTAGTTGAAGAAAAGTCTAGCTTAATAGATTTAACTGAAAGTGAGGTAAC--GAAAAT----ATT---------------TT----------------AGTATTCATACAAA--------------------------------ACTAAACAACTTTT-CTTT------TGGC-TTTAATC---------------------------------AATATG-TTTTTGGATTGAAAATGGTTTT-----------TCATATTTGGAA--AATATAATTTAAAATGTTTT-------------------------------CTATTAATAAATGTA---TAATTCCAAGATTTGAATATTGCTAATATGTGTGC-TACGTCGTATA-TGAACA-TAAA----------------------------------------------------------------------------------TATGGTTTAA-A-TT-TGT---------------TTTT-TCTT--TGTGCATAGGAAAAGGGTCACAAAATTT---CAAGGCCGGACCACAGCCCTGTTT---TTAGT-AASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT---CAAGGCCGGACCACAG...................1817.00700001600000000000
......................................................................................................................................................................................................................................................................................................................................................................................TGC-TACGTCGTATA-TGAACA-TAAA----------------------------------------------------------------------------------...............................................................................................................2412.00200000002000000000
..............................................................................................................................................................................................................................................................................................................................................................................AATATGTGTGC-TACGTCGTATA-TGA.........................................................................................................................................................................................................2512.00200200000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT---CAAGGCCGGACCACAGC..................1911.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAATTT---CAAGGCCGGAC........................1911.00100100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---CAAGGCCGGACCACAGC..................1811.00100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAAATTT---CAAGGCCGGACC.......................2111.00101000000000000000
.................................................................................................................................................................................................................................................................................................................................................................TTTGAATATTGCTAATAT...............................................................................................................................................................................................................................1811.00100100000000000000
.................................................................................................................................................................TT-CTTT------TGGC-TTTAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................16200.05100000000100000000
droSec2
ACTTATTAGTTGAAGAAAAGTCTAGCTTAATAGATTTAACTGAAAGTGAGGTAAT--GAAAAT----ATT---------------TT----------------AGTATTCATTCAAA--------------------------------ACTAAACAACTTTT-CTTT------TGGC-TTTAATC---------------------------------AATATG-TTTTTGGATTGAAAATGGTTTT-----------TCATATTTGGAA--AATATAATTTAAAATGTTTT-------------------------------CTATTAATAAATGTATCATCATTCCAAGATTTGAATATTGCTAATATGCGTGTCTATATCGTATA-TGAACA-TAAA----------------------------------------------------------------------------------TATGGTTTAA-A-TTTTTT---------------TTTT-TCTT--TGTGCATAGGAAAAGGGTCACAAAATTT---CAAGGCCGGACCACAGCCCTGTTT---TTAGT-AASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................AATAGATTTAACTGAAAGTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020200
dm3
ACTTATTAGTTGAAGAAAAGTCTAGCTTAATAGATTTAACTGAAAGTGAGGTAAT--AAAGAT----ATT---------------TA----------------AGTAATCACACAAA--------------------------------TCTAAACAACTTTT-CTACTTTT------------TC---------------------------------AATATG-TTTTTGGATTGAAAATTGTTTT-----------TCATATTTGGAAAAAATATAATTTCAAATGCTTT-------------------------------CCATTAATAAATTTA---TCATTCCAAGATTTGAATATTGCTAATATGTTTGTTTACATCGTATA-TGAACA-TAAA----------------------------------------------------------------------------------TATGGTTAAA-A-TTTGTT---------------TTTT-TCTT--TGTACATAGGAAAAGGGTCACAAAATTT---CAAGGCCGGACCACAGCCCTGTTT---TTAGT-AASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........TTGAAGAAAAGTCTAGCTTAATAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000100200000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAA-A-TTTGTT---------------TTTT-TCTT--T.................................................................2115.0050000000000000000000000000000000000000000000000000000010000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000001020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAA-A-TTTGTT---------------TTTT-TCTT--..................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TGAAGAAAAGTCTAGCTTAATAGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000
......TAGTTGAAGAAAAGTCTAGCTTAATAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000002010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............AAGAAAAGTCTAGCTTAATAGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GATTTAACTGAAAGTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000001000100000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAAAATTT---CAAGGCCGGACCACAGC..................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAAAAGGGTCACAAAATTT---C..................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGGTCACAAAATTT---CAAGGCCGGAC........................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................T---------------TA----------------AGTAATCACACAAA--------------------------------TCTAAACAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TATTAGTTGAAGAAAAGTCTAGCTTAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAAAATTT---CAAGGCCGGACCACA....................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................TAGCTTAATAGATTTAACTGAAAGTGAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TTAGTTGAAGAAAAGTCTAGCTTAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAAAATTT---CAAGGCCGGACCACA....................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......TAGTTGAAGAAAAGTCTAGCTTAATAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGGACCACAGCCCTGTTT---TT......2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002
............................AATAGATTTAACTGAAAGTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT---CAAGGCCGGACCACAGCCCTGTTT---TT......2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GTTGAAGAAAAGTCTAGCTTAATAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
.........TTGAAGAAAAGTCTAGCTTAATAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGGAAAAGGGTCACAAAATTT---C..................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....ATTAGTTGAAGAAAAGTCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................AAT--AAAGAT----ATT---------------TA----------------AGTAATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT---CAAGGCCGGACCACAG...................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
............................AATAGATTTAACTGAAAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
...........GAAGAAAAGTCTAGCTTAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTT---CAAGGCCGGACCACAGCCC................2411.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT---CAAGGCCGGACCACAGCCCTGTTT---T.......2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATTT---CAAGGCCGGACCACAGC..................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAA-A-TTTGTT---------------TTTT-TCTT--..................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TAATAGATTTAACTGAAAGTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................ATA-TGAACA-TAAA----------------------------------------------------------------------------------TATGGTT........................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTT--TGTACATAGGAAAAGGGTCACA............................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................TA---TCATTCCAAGATTTGAATATTGC.....................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGTCACAAAATTT---CAAGG..............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TGAAGAAAAGTCTAGCTTAATAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........GAAGAAAAGTCTAGCTTAATAGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...TATTAGTTGAAGAAAAGTCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................TAGCTTAATAGATTTAACTGAAAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................TGGAAAAAATATAATTTCAA....................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CTTATTAGTTGAAGAAAAGTCTAGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................TTAACTGAAAGTGAGGTAAT--AAAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.................................ATTTAACTGAAAGTGAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TAACTGAAAGTGAGGTAAT--AAAGAT----ATT---------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GTTGAAGAAAAGTCTAGCTTAATAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAAAATTT---CAAGGCCGGACCACAGCC.................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................AGCTTAATAGATTTAACTGAAAGTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................GAAAGTGAGGTAAT--AAAGAT----A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TTTGGATTGAAAATTGT.............................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTCACAAAATTT---CAAGGCC............................2111.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ACTTATTAGTTGAAGAAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTT---------------TTTT-TCTT--TGTACATAG.........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TATTAGTTGAAGAAAAGTCTAGCTTAATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTT---------------TTTT-TCTT--TGTACATAG.........................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGGTCACAAAATTT---CAAGGCCGGA.........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TAGTTGAAGAAAAGTCTAGCTTAATAGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TAGTTGAAGAAAAGTCTAGCTTAATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................A----------------AGTAATCACACAAA--------------------------------TCTAAACAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TTAGTTGAAGAAAAGTCTAGCTTAATAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAATTT---CAAGGCCGGACCACAGCCC................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TTAGTTGAAGAAAAGTCTAGCTTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCGGACCACAGCCCTGT.............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AAGTCTAGCTTAATAGATTTAACTGAAAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GAAAAGTCTAGCTTAATAGATTTAACTGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TAGTTGAAGAAAAGTCTAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGGTCACAAAATTT---CAAGGCCGGAC........................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................CTAAACAACTTTT-CTACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTT---CAAGGCCGGACCACAGCCCTGT.............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TTAGTTGAAGAAAAGTCTAGCTTAATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAAATTT---CAAGGCCGGACCACAGCC.................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA-A-TTTGTT---------------TTTT-TCTT--TT................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ACTTATTAGTTGAAGAAAAGTCGAGCTTAATAGACTTAACTGAAAGTGAGGTAAT--AAAGAT----TCT---------------TA----------------AGAATTCATTAAAA--------------------------------ACTAAACTATTT-T-CTTCCTCTTATGGCCCTTAAAC---------------------------------AATATATTTTTTGGACTGAAAATGTTTTTTTT---CT-ATTATTATTTGGGA--AGTATAATTTAAAATATGTT-------------------------------GCACACATAAATTAT---TCATTCCAAGATATAAATATTCCTAATATGTTTGTTTACATCGTATACCAAACA-TAAT----------------------------------------------------------------------------------TATGGTTTAA-A-TATAAT---------------TTTT-TCTT--TATACATAGGAAAAGGGTCAAAAAATTG---CTAGACCGGATCACAGCCCTGTTT---TTAGT-AASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAAATTG---CTAGACCGGATCACAGCC.................2811.0010000010
.....................CGAGCTTAATAGACTTAACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
.........TTGAAGAAAAGTCGAGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTG---CTAGACCGGATCACAGCCCTGT.............2711.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG---CTAGACCGGATCACAGCCCTGT.............2411.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAAATTG---CTAGACCGGATCAC.....................2411.0011000000
........GTTGAAGAAAAGTCGAGCTTAATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
...TATTAGTTGAAGAAAAGTCGAGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
droYak3
ACTTATTAGTTGAAGAAAAGTCGAGCTTAATAGATTTAACTGAAAGTGAGGTAAT--AAATAC----ATT---------------TA----------------AGAATTCATTCAAA--------------------------------ACTA------TTTT-CTTCCTTTTATGAC-TTGAAAC------------------------------------TTT-TTTTTAAATTAAAAATGTGTTTATTAATTA-ATTCGTATTTGGAA--AGTATAATTTCAAATGTGCT-------------------------------GCGTACAAAAATTAT---TAATTCCAAGATATGAATGTTGCTAATATGTTTCTTTACATCGTAAA-TGAACA-TAAT----------------------------------------------------------------------------------TATGGTTTGA-A-TTTGAC---------------TTTT-TCTT--TGTACATAGGAAAAGGGTCAAAAAATTG---CAAGACCGGACCACAGCCCTGTTT---TTAGT-AASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................................................................................................................................................TTCAAATGTGCT-------------------------------GCGTACAAAAATTAT---T...........................................................................................................................................................................................................................................................2811.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAC---------------TTTT-TCTT--TGTACATAG.........................................................2011.00101000000000
............................AATAGATTTAACTGAAAGTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
....................................................................................................................................................................................................................................................GTTTATTAATTA-ATTCGTATTTGGAA--AGT..............................................................................................................................................................................................................................................................................................................................2911.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................TTACATCGTAAA-TGAACG-.....................................................................................................................................................................................................1811.00110000000000
...........GAAGAAAAGTCGAGCTTAATAGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
......................................................................................................................................................................................................................................................................................AATTTCAAATGTGCT-------------------------------GCGTA.........................................................................................................................................................................................................................................................................2011.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................A-TAAT----------------------------------------------------------------------------------TATGGTTTGA-A-TTTGAC---------------TTTT-........................................................................2611.00100000010000
..............GAAAAGTCGAGCTTAATAGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTT--TGTACATAGGAAAAGGGT................................................2211.00100000010000
droEug1
ACTTATTAGTTGAAGAAAAGTCGAGCTTAATTGATTTAACTGAAAGTGAGGTAAT--TAAAAT----GAT---------------TA----------------AGAAATAATTAAAA--------------------------------CCCAAAATTATT------CCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATGTATTTGGTATAAATA---------------------------------------TGSizeHit CountTotal NormTotal
No Reads
droBia1
ATATATTT--------------TAACTTATT---TTTAAGCGATAACGAGCTAT---------------------------------------------------------------AAAAGGTTGACGTCTTACCAAATATG----------------TTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA---TAACTTA--------------------------------------------------------------------------------------------------------------------TCA--ATATTAATATATTTGTTATTTAAAATTTTATT---------------TTTT-TCTT------TGTAGGAAAAGGGTCAAAAAATTG---CGCGGCCGGACCACAGTCCTGTTT---TTAGT-AASizeHit CountTotal NormTotal
No Reads
droTak1
AATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAT---------------TTTT-TCTT--TGTATATAGGAAAAGGGTCAAAAAATTG---CAAGGCCGGACCACAGCCCTGTTT---TTAGT-AASizeHit CountTotal NormTotal
No Reads
droEle1
CTAAA---------------------------------------AATGGCTTTTC--AAAATT----TTT---------------TG----------------AAACTTGCTTTAAA--------------------------------AATAAAAAAAAT-TATTTT-TGTTCTAGT------TC---------------------------------TTAGTT-TTTTGGAATTGAAAAAGGGTTG-----------TTTTAGTTAGCA--AATAC------------------------------------------------------------------------------------------------------------------------ATT----------------------------------------------------------------------------------AAT-TTAATT-C-GTTTTA---------------ATTT-AATTTTTATACCCTTCCAGAGGGTATTATAATTT---CA--GTCAGAAGTTTGCAACGCAG---TGAAA-GASizeHit CountTotal NormTotal
No Reads
droRho1
ACTTATTGGTTGAAGAGAAGTCAAGCTTGATAGATTTAACTGAAAGTGAGGTAAT--ATGAAT----CCT---------------TA----------------AAAAA------------------------------------------ATCA-TAACTTTT-GCTT------AACA-TTTGACA---------------------------------AAT------TGACTGGATTTATCGT-------------GAAAGAGAAACTGA--ATTTACGA--------------------GAAAGAAAAATTACAAATACTTCGTATTGATCAACTT-----------------------------------------------------------TAAA----------------------------------------------------------------------------------AA-------------TA---------------------ATACT--TCT-AAAATAAAATCGGCAGCAGAAT------------GAAAACGAGCAGTATTTAAATTAGT---SizeHit CountTotal NormTotal
No Reads
droFic1
ACTTGTTAGTTGAAGAGAAGTCAAGCCTAATAGATTTAACTGAAAGTGAGGTAAT--ATAAAT----TTC---------------TT--------------AC--------------TCTTAATTTTAATTGA----------------ATTTAATAAACATA-ATTA------TAAT-TTTAACC---------------------------------AACAGC-TTATGATTTTAAGATTAGGGTT-----------TCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAT---AAAAAAAAATTAAAAATATTTTTT---ATTAT-TASizeHit CountTotal NormTotal
No Reads
droKik1
ACTTATTAGTTGAAGAAAAATCAAGCTTAATAGATTTAACGGAAAGTGAGGTAAG--ATAAACAAATCTATTATAACTTAAATAATGAAAGT---------------------------------------------------------------------------------------------TAACTGTTTATGTGTTTCAGATTCAGCTTTAATTAAAATT-T--------------------------------------------------------AAAA--------------AAACAGAACAC-------------TATTGATCTA--------------------------------------------------------------TAAATATTATAAAAAACAATACATAAACAGTGAACCGAGTATATATTAATTATTATAATATTTTTGCCTCAATTTGATAATATT---------GTA-A-TTTTTC---------------TTTT-TTTG--TGAATATAGGAAAAGAGTCAGAAAGTAG---CTAGACCCGACCACAGCCCGGTTT---TTAGT-AASizeHit CountTotal NormTotal
No Reads
droAna3
ATCTATTAGTCGAAGAAAAATCAAGCTTAATAGATTTAACGGAAAGTGAGGTGAG--AT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTT----ACCTT--TTAATA----------------------------------------------------------TASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TTTGGATT----------------------------------------------------------------------------------------CAATG----------------------------------------------------------------------------A-CT----------------------------------------------------------------TAT-----------TTATCACAACAA--AATATAACATTAAATGTTGTTCATATAGAA---------------------GTAAATATGTTTATA---TAGCTTATATTATTAAGTATAT------------------------------------------------------------------------------------------------------------------------------C------------CATTCTGT------ATTT-TTTT--TGT-TTTAGGACAAGGGCCAAAAAGCTG---TACGTCTGGAGCACAGCCCAGTTT---TTAGT-AASizeHit CountTotal NormTotal
No Reads
dp5
ATCTGTTAGTTGAAGAGAAGTCCAGCTTAATAGATTTAACCGAAAGTGAGGTAAG--TCGCAG----CTT---------------CT--------------AT--------------ACATACTATTCGTCAATCTACATATATTAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCA-----------------------------------------------T--------------------------------------------------------------------TCA--TTCACAACATAATAATTTT-T--------------CTAT--TTATTT----ATTTT--TCTACTTAGGAAAAGGGCAACAAAACAG---TCAGGCCGGACCACAGCCCTGTTT---TTAGT-AASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............GAGAAGTCCAGCTTAATAGATTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---TCAGGCCGGACCACAGCCC................2111.0010010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAG---TCAGGCCGGACCA......................1911.0010000100000
droPer2
ATCTGTTAGTTGAAGAGAAGTCCAGCTTAATAGATTTAACCGAAAGTGAGGTAAG--TCGCAG----CTT---------------CT--------------AT--------------ACATACTATTCGTCAATCTACATATATTAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCA-----------------------------------------------T--------------------------------------------------------------------TCA--TTCACAACATAATTATTTTTC--------------CTAT--TTATTT----ATTTT--TCTACTTAGGAAAAGGGCAACAAAACAG---TCAGGCCGGACCACAGCCCTGTTT---TTAGT-AASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAAACAG---TCAGGCCGGAC........................2112.002200000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAG---TCAGGCCGGACCAC.....................1912.002200000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---TCAGGCCGGACCACAGCCC................2111.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAAAACAG---TCAGGCCGGACCAC.....................2611.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAG---TCAGGCCGGACC.......................1811.001010000
droWil2
GATTTTAACT------------------------------------------------------------------------------------------------------------------------------------------------------TAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------TTAT--CACTAT----AATTT--ACCCCATAGGAAAAAGGTAGCAAAGCAG---CAAGGCCGGATCACAGTCCTGTTT---TCAGT-AASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCGGATCACAGTCCTGT.............1911.00100010
droVir3
ACCTTTTAGTCGAAGAAAAATCAAGCCTCATTGATTTAACAGAGAGTGAGGTATGATATGAAT--GCCCT-----------------------------------------TATAAA--------------------------------ACTCA--AACTTTG-A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTC-----------------------------------------------------------------------------------------------------CTCAAT--------------------------------------------------------------TAAAGGTGACTGCTTTGAA--------------------ATTGTCTTCTTT---TAACTGAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................GCCTCATTGATTTAACAGAGAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001000000000000000000000000000000000000000000000000000000000
.....TTAGTCGAAGAAAAATCAAGCCTCATTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000010000000000000000000000000000000000
............................CATTGATTTAACAGAGAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
TATATAAT----------------------------------------------------------------------------------------TTTTA----------------------------------------------------------------------------T-TTTATAC---------------------------------AATT---TATAATTATTTAAATTATTAAT-----------ATACAGTAGTAA--ATTATATTATTTAATTTATT-------------------------------GTATATATGTATGTA---TAACTCTTATTAATGAATATTTTTAATATATGC--TTACCTCTGATAATATACA-TATT----------------------------------------------------------------------------------ATT-ATTATT-A-TTTTTA---------------GTAT-ACTT--TATAT-----------------------------------------------------------ATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
ACCTTTTAGTCGAAGAGAAATCAAGCCTTATCGATTTAACAGAGAGTGAGGTAAA--TTATAC----TTG--------------TTGAAAATTAATTTCTT----------------------------------------TATTAAAT--T----ACATT------C----------------------------------------------------------ATTAATTATATATATTATAATA--------TTAATAGAATATTAA--ATTTAATT----------------------------------------------------------------------GAATTAAATTTATTAATTATGTATATTT-AATAGTAAT-CGAATA-TTAA----------------------------------------------------------------------------------ATTTAATAAA-T-TA-CATTTATTAT--TTATGT----ATTTT--TTT-AACAGGAAAAGGGCAGCAAAACAGTGACGAGGCCGGATCACAGTCCCGTAT---TCAGT-AASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 03:50 PM