ID:

dsi_21726

 Coordinate:

3l:1447319-1447609 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.6 -15.5 -15.3

Flybase annnotation

five_prime_UTR [3l_1447512_1447789_+]; exon [3l_1447512_1448063_+]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------####################################################################################################################################################
GGTCTGCTCCACTCCGCGATATTTGTTTGCCCAGCTGGTCTTTGTTGTTGGTAGGTCCAAACAAACACGCAGCCAGTGTTAACCCAGTTTTTGGGCTAGTGATTGCTGCAGCTCCCACGACCCAGCAGCGGGTTAAATCTAACAGTGTAATAGGGAAAGAGGTTGAACGAGGAGAGTGTTGTGTTATTGGTGGTGGACGTGGGCAACGACATTGGCATAGAAAATTTTGCATACTCTCTCCTTCGCACACGCACACCTTCGTCGAAAGTGTAAAAATAAAACAAACAAGTAAAAATAGCACTTGGCTTTTTGTTGTGCCTAAAGTTGTACGTATTTTGCAGACGGAAATTGATTGGTTGTGTAAATTGGAAAGTGCACGAAATCGCGAGCG
*************************************************************************************************************************************************************************************......(((.((((..((((.((((.((.....(((..........)))........)).)).)).))))..)))).))).........************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 O001
Testis
 SRR553488
RT_0-2 hours eggs
 M023
head
 M025
embryo
 M024
male body		 SRR902008
ovaries
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
..................................................................................................................................................................................................................................................................................................................................................TTGATGGAAATTGATTGGTTGTGTAAA.......................... 27 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................AAAGAGGTTGAACGAGGCGAG....................................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........CTCCGCGATATTTGTTTG.......................................................................................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
................................AGCTGGTCTTTGTTGTTGG.................................................................................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................TGTTATTGGTGGTGGACG................................................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................................GATTGGTTGTGTAAATTGGAAAG.................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................GGCTAGTGATTGCTGCAGCTTA.................................................................................................................................................................................................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................GTTGTGTTATTGGTGGTGGAG................................................................................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................CACACCTTCGTCGAAAGTG......................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................TATTGGTGGTGGACGTGGG............................................................................................................................................................................................ 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................TTGTGTTATTGGTGGTGGACG................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................................TTGATTGGTTGTGTAAATTGG...................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................ACGAGGAGAGTGTTGTGT............................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................ATTAGGACTTGGCTTTTTGT.............................................................................. 20 2 3 0.67 2 0 0 0 0 0 0 2 0 0 0 0 0
............................................................................................................................................................................................................GGCGACATTGGCATAGAAAAT...................................................................................................................................................................... 21 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................AAACGTTAGCATACTCTCTCC...................................................................................................................................................... 21 3 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0
...............................................................................................CTAGTGATTGCTGCAGCTTT.................................................................................................................................................................................................................................................................................... 20 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................GGTTTTGGGAGAGTGATTGCT............................................................................................................................................................................................................................................................................................ 21 3 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0
.................................GCTGGTCGTTGTTGTTGG.................................................................................................................................................................................................................................................................................................................................................... 18 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1 0
..................................................................................................................................................................................................................................................................TCTTCGAACGTGTAAAAA................................................................................................................... 18 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................TTTGTCGAAATTGTAAAAAAAAA............................................................................................................... 23 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................TTTTGGGAGAGTGATTGCT............................................................................................................................................................................................................................................................................................ 19 2 6 0.17 1 0 0 0 0 0 0 0 0 1 0 0 0
...............................................................................................................................................................................................................................................................CCTTCGCCGAAAGTCTAA...................................................................................................................... 18 2 7 0.14 1 0 0 0 0 0 0 0 0 0 1 0 0
...................TATTTGTTTGTCCAGC.................................................................................................................................................................................................................................................................................................................................................................... 16 1 20 0.10 2 0 0 0 0 0 0 0 0 0 2 0 0
...............................................................................................................................................................................................................................................................CCTTCGTTGAAAGTCTAGA..................................................................................................................... 19 3 13 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0
..............................CGTGCTGGTCTTTGTTGT....................................................................................................................................................................................................................................................................................................................................................... 18 2 14 0.07 1 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................AACCAAGTTTTTGGG........................................................................................................................................................................................................................................................................................................ 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0
...........................................................................................................................................................................................................................................................................................................................................................CGTGATTGGTTGTGTA............................ 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1
.................................................................................................................................................................................GTTTTGTTATTGGTGGTC.................................................................................................................................................................................................... 18 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0
....................................GGTCTTTGTTGTTGA.................................................................................................................................................................................................................................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

CCAGACGAGGTGAGGCGCTATAAACAAACGGGTCGACCAGAAACAACAACCATCCAGGTTTGTTTGTGCGTCGGTCACAATTGGGTCAAAAACCCGATCACTAACGACGTCGAGGGTGCTGGGTCGTCGCCCAATTTAGATTGTCACATTATCCCTTTCTCCAACTTGCTCCTCTCACAACACAATAACCACCACCTGCACCCGTTGCTGTAACCGTATCTTTTAAAACGTATGAGAGAGGAAGCGTGTGCGTGTGGAAGCAGCTTTCACATTTTTATTTTGTTTGTTCATTTTTATCGTGAACCGAAAAACAACACGGATTTCAACATGCATAAAACGTCTGCCTTTAACTAACCAACACATTTAACCTTTCACGTGCTTTAGCGCTCGC
*************************************************************************************************************************......(((.((((..((((.((((.((.....(((..........)))........)).)).)).))))..)))).))).........************************************************************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 M024
male body		 O001
Testis
 O002
Head
 SRR553485
Chicharo_3 day-old ovaries
 GSM343915
embryo
...GACGAGGTGGGGCGC..................................................................................................................................................................................................................................................................................................................................................................................... 15 1 10 8.10 81 52 0 15 2 11 0 0 0 0 1 0
...GACGAGGTGCGGCGC..................................................................................................................................................................................................................................................................................................................................................................................... 15 1 12 3.00 36 35 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................ACCACCTCCTGGGCCCGTTGCT...................................................................................................................................................................................... 22 3 2 2.50 5 2 0 3 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................TCAACATGCATAAAACGTCTG................................................ 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................CCCTAGTTAGATTGTCAC.................................................................................................................................................................................................................................................... 18 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................TGTCACATTATCCCTTTCTCC..................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
..................................................................TGCGTCGGTCACAATTG.................................................................................................................................................................................................................................................................................................................... 17 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
........GGTGAGGCGCTATAAACAAA........................................................................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........TGAGGCGCTATAAACAAACGG........................................................................................................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................ACCCGATCACTAACGACGTC........................................................................................................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
............AGGCGCTATGGACAAACGGGT...................................................................................................................................................................................................................................................................................................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........GTGAGGCGCTATAAACAAAC.......................................................................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
CCCGACGAGGTGCGGCGC..................................................................................................................................................................................................................................................................................................................................................................................... 18 2 10 0.60 6 6 0 0 0 0 0 0 0 0 0 0
...............................................AACCATCAAGGTTTGTT....................................................................................................................................................................................................................................................................................................................................... 17 1 6 0.33 2 0 0 0 2 0 0 0 0 0 0 0
................................................................................................................................GCCCAATTTAGATAGTCG..................................................................................................................................................................................................................................................... 18 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................GACGTCAAGTGTGCTGCGTC.......................................................................................................................................................................................................................................................................... 20 3 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0
...GACGAGGTGTGGCGC..................................................................................................................................................................................................................................................................................................................................................................................... 15 1 9 0.22 2 2 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................AGGGAGGTAGCGTGTGCG........................................................................................................................................... 18 2 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................TCGCCAAATGTAGATTG........................................................................................................................................................................................................................................................ 17 2 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................ACGTCAAGTGTGCTGCGTCG......................................................................................................................................................................................................................................................................... 20 3 8 0.13 1 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................AAAACTACACGGATGTCA.................................................................. 18 2 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................CTACTTAGATTGGCACATT................................................................................................................................................................................................................................................. 19 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 1
...........................................................................................................................................................................................ACCACCTCCTGGGCCCGTTG........................................................................................................................................................................................ 20 3 10 0.10 1 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................AACTACACGGATTTC................................................................... 15 1 13 0.08 1 0 0 1 0 0 0 0 0 0 0 0
.TAGACGAGGTGGGGCGC..................................................................................................................................................................................................................................................................................................................................................................................... 17 2 13 0.08 1 0 0 1 0 0 0 0 0 0 0 0
...............................................................TTGTGCGTCAGACACAA....................................................................................................................................................................................................................................................................................................................... 17 2 16 0.06 1 0 0 0 1 0 0 0 0 0 0 0
.CTGACGAGGTGTGGCGC..................................................................................................................................................................................................................................................................................................................................................................................... 17 2 17 0.06 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................TGGGTGCTGGGTCGT........................................................................................................................................................................................................................................................................ 15 1 19 0.05 1 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................GGAAGCGTGTTCGAGT........................................................................................................................................ 16 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:1447269-1447659 + dsi_21726 GGTC-TGCTCCACTCCGCG--ATATTTG--TTTGCCCAGCTGG---------TCTTTGTTGTTGGT-AGGTCCA------------AACAAACACGCA----------GCCAGTG----TTAACCCAGTTTTT-----G-GGC--TA---------GTGA--------TTGCTGCAGCTCCCAC---GACC---------------------CAGCAGCGGGTTAAATCTAACAGT-GTA------ATAGGGAA----------------------------------------------A--GAGGTTGAAC--G-----------AGGAGAGTGTT---------------G-------TGTTA----TTGGTGGTGGAC----GTGGGCA-ACGA---------CATTGGCATAGAAAATTTTGCATACTCT-CT--CCT----------TC-----GC----A---------CACGCACACCT------------------------------------------TCGTCGAAAGTGTAAAAATAAA--ACA------------AACAAGT-AAAAATAGCACTTGGCTTTTTGTTGTGCC---------TAA-AGTTGTACGT--A--------T-TTTGCAGACGGAAATTGAT-T----------------------------------------GGTTGTGT-AAATTGGAAAGTGC-ACGAAA--------------------------TCGC--G---AGCG
droSec2 scaffold_2:1563464-1563854 + GGTC-TGCTCCACTCCGCG--ATATTTG--TTTGCCCAGCTGG---------TCTTTGTTGTTGGT-AGGTCCA------------AACAAACACGCA----------GCCAGTG----TTAACCCAGTTTTG-----G-GGC--TA---------GTGA--------TTGCTGCAGCTCCCAC---GGCC---------------------CAGCAGCGGGTTAAATATAATAGT-GTA------ATAGGGAA----------------------------------------------A--GAGGTTGAAA--G-----------AGGAGAGTGTT---------------G-------TGTTA----TTGGTGGTGGAC----GTGGGCA-ACGA---------CATTGGCATAGAAAATTTTGCATACTCT-CT--CCT----------TC-----GC----T---------CACGCACACCT------------------------------------------TCGTCGAGAGTGTAAAAATAAA--ACA------------AACAAGT-AAAAATAGCACTTGGCTTGTTGTTGTGCC---------TAA-AGTTGTACGT--A--------T-TTTGCAGACGGAAATTGAT-T----------------------------------------GGTTGTGT-AAATTGGAAAGTGC-ACGAAA--------------------------TCGC--G---AGCG
dm3 chr3L:1537193-1537573 + GGTC-TGCTCTACTCCGCG--ATATTTG--TTTGCCCAGCTGG---------TCTTTGTTGTTGGT-AGGTCCA------------AACAAACACGCA----------GCCAGTG----TTAACCCAGTTTTG-----G-GGC--TA---------GTGA--------TTGCTGTGGCTCCCAC---GGCC---------------------CAGCAGCGGGTTAAATACGACAGT-GTA------ATTG----------------------------------------------------------TGAAA--G-----------AGGAGAGTGTT---------------G-------TGTTG----TTGGTGGTGGAC----GTGGGCA-ACGA---------CATTGGCATAGAAAATTTTGCATACACT-CT--CCT----------TC-----GC----A---------CACGCACACCT------------------------------------------TCGTCGAAATTGTAAAAATAAA--ACA------------AACAAGT-AAAAATAGCACTTGGCTTGTTGTTGTGCC---------TAA-AGTTGTACGT--A--------T-TTTGCAGACGGAAATTGAT-T----------------------------------------GGTTGTGT-AAATTCGAAAGTGC-ACGAAA--------------------------TCGC--G---AGCG
droEre2 scaffold_4784:1515535-1515922 + GGTC-TACTCCACTCCGTG--GTATTTG--TTTGCCCAGCTGG---------TCTTTGTTGTTGGT-AGGTCCA------------AACCGAGACGCA----------GCCAGTG----TTAACCCAGTTTTT-----G-GGC--TA---------GTGA--------TTGAAGTAGCTCCCAC---GGTC---------------------CACCAGCGGATTAAACTTAATCGT-GTAG------AAGAGAA----------------------------------------------A--GAGGGTGAAA--G-----------AGGAAAGTGTT---------------------------G----TTGGTGGTGGAC----GTGGGCA-ACGA---------CATTGGCATAGAAAATTTTGCATACACTTCT--CCT----------TC-----GC----A---------CACGCACACTA------------------------------------------TTGTCGAAAGTGTAAAAATAAA--ACA------------AACAAGT-AAAAATAGCACCTGGTTTGCTGTTGTGCC---------TAA-AGTCGTACGT--A--------TTTTTGCAGACGGAAATTGAT-T----------------------------------------GGTTGTGT-AAATTGGAAAGTGC-ACGAAA--------------------------TCGC--G---AGCG
droYak3 3L:1486241-1486632 + GGTC-TGGTCTACTCCGCG--ATATTTG--TTTGCCCAGCTGG---------TCTTTGTTGTTGGT-AGGTCTA------------AGCCAAGACGCA----------GCCAGTG----TTAACCCAGTTTTT-----G-AGC--TA---------GTAA--------TTGAAGTAGCTCCCAC---GGTC---------------------CGCCAGCGGGTTAAATTTAATCGT-GAAG------AAGGGAA----------------------------------------------A--GAGGGTGAAT--G-----------AAGAAAGTGTT---------------T-------TGTTG----TTGGTGGTGGAC----GTGGGCA-ACGA---------CATTGGCATAGAAAATTTTGCATACACT-CT--CCT----------TC-----GC----A---------CACGTACACTT------------------------------------------TCGTCGAAAGTGTAAAAATAAA--ACA------------AACAAGT-AAAAATAGCACCTGGTTTGTTGTTGTGCC---------TAA-AGTCGTACGT--A--------TTTTTGCAGACGGAAATTGAT-T----------------------------------------GGTTGTGT-AAATTGGAAAGTGC-ACGAAA--------------------------TCGC--G---AGCG
droEug1 scf7180000409007:349337-349770 + GGTC-TCGTCTGGTCCACG--GTACTTA--TTTGCCCAGCTGCT-------------GTTGTTGGT-AGGTCCA------------AACAAAGACGCA----------GCTAGTT---TATAACCCAGTTTTGGTTTTG-GGC-CTT---------GTGATAAAA---TGAAAGCAGCTTCAAC---GGTC---------------------CTCTTGTGAGTTAAAGTT-------GAAG------GAGTGAAATTTGGAA--------------------G--AGGTGGTGTATATGAAGAGAG---G-A-GG------------AGGAGAGTGTTTGCGTT--TGAC---GTTTTTTTTGTTG-TGATTGGTGGTGGAC----GTAGGCA-ACGA---------CATTGGCATAGAAAATTTTGCATACACT-CT--CCT----------TT-----AC----A---------CACACACACTT------------------------------------------TCGTTGAAAG--TAAAAATAAA--AAA------------AATACGT-AAAAATAGCACTTGCGTTGTTGTTGTACC---------CAA-AAACGTATGT--A--------TCTTTGCAGACGGAAATTGAT-T----------------------------------------GGTTGTGT-AAATTGGAAAGTGC-ACGAAA--------------------------TCGC--G---AGCG
droBia1 scf7180000300910:1644572-1644983 + GCTC-AGCTCTGCTCCACG--CTATTTG--TTTGCCCAGCTGCT-------------GTTGTTGGT-AGGTTCGAACTCACGTCCAAACAAAGACGC--------------AGTG---CTTAACCCAGTTTCC-----G-GGC--C------------GA---AGTAATAGA--CGACT-TAAC---GGTC---------------------TACTAGTGGGCTAAAGTG-------CGGG------GAGTGCAC----GAAGAAGA-----GTGGGGGTGG----------------GAA---A---CG-A-GG------------AGGAGAGTGTT---------------TT------TGTTG----TTGGTGGTGCAC----G-------ACGA---------CATTGGCATAGAAAACTTTGCATACCCT-TC----T----------AC-----CC--ACACTCTCCGCACA--CACACGC------------------------------------------TCGTCGAAAGTGTAAAAATAAAA-ATA------------AACAAGT-AAAAATAGCACCTGAACTGTTTGTGTACC---------CAA-AACCGTATGT--ATTT-----CTTTTGCAGACGGAAATTGAT-T----------------------------------------GGTTGTGT-AAATTGGAAAGTGC-ACGAAA--------------------------TCGC--G---AGCG
droTak1 scf7180000415095:276685-277106 - GAGC-TCCTCTACTCCACG--CTGTTTA--TTTGCCCAGCTGCTGAG-----TGCTGTTTGTTGGT-AGGTTCAAATTCAAAACCAAACAAAGA------------------GTTTAGTTTAACCCAGTTTCT-----G-AGC--CC---------GTGA--------CGAAGGCAGCTTAA-----AA--------------------------------------CCCAA-------AG------GAGTGTAA----GAAGAAGAGTGGT--GGGGGTGG----------------GAAAAGAA---G-T-GG------------GGGAGAGTGTT---------------TT------TGTTG----TTGGTGGTGGAC----GTAGGCAAACGA---------CATTGGCATAGAAAATTTTGCATACACT-CT--CCT----------TC-----CC--ACAC---ACGCACA--CACACTC--------------------------------------TCTCTCGACGAAAGTGTAAAAATAAA--ACA------------AACAAGT-AAAAATAGCACTTGGTTTGTTGTTGTGCC---------CAAAAAACGTATGT--ATTTCTCTTTTTTTGCAGACGGAAATTGAT-T----------------------------------------GGTTGTGT-AAATTGGAAAGTGC-ACGAAA--------------------------TCGC--G---AGCG
droEle1 scf7180000491249:4060160-4060546 - GTG---GAAATACTCCACAT-ATATTTGTATTTGTCCAGCTGCT-------------GTTGTTGCT-GGCTCCA------------AACAAATACGCA----------ACCAGTT---TTTAACCCAGTTTCT-----AAGGC--T----------CCAA--------AGAAATCAGCTCCAAA---AGTCACAGCAAA--------------------------------GTTGT-GTG-------------------GCA--------------------GAAAGGTGG---G--TGAA--GAGTGCGA--GA------------AGGAGAGTGTTTTCTTT--TGCC---CTTTTTGTTGTTG-TTGGTGGTGGTGGACGGACGTGGGCA-ACGA---------CATTGGCATAGAAAACTTTGCATACACT-CTCTCC------------T-----GC----A---------CACCTACACTC------------------------------------------TCGTCAAAAG--TAAAAATAAAAAACA------------AATAAAT-AAAAATAGCACTTG---------------------------------AACGT--A--------TTTTTGCAGACGGAAATTGAT-T----------------------------------------GGTTGTGT-AAATTGGAAAGTGC-ACGAAA--------------------------TCGC--G---AGCG
droRho1 scf7180000776850:423804-424207 - GTA---GTAATACTCCACGCACTATATA--TTTGCACAGCTGAT-------------GTTGTTGTT-GGCTCCA------------AACAAATACGCA----------GCCAACT---TTTAACCCAGTTTTA-----AAGGC--TC---------CCAA--------AGAAATCAGCTCCAAA---AGTCACAACAAA--CTCATCG-----------------CACTCAAGGGT-ACAG------GAGTAAA-------A--------------------GAGAGGTGG---G--TGAA--GAGTGAG--AGA------------GGGAGAGTGTTTTCTTT--TGGT---TTTCT---TGTTG----TTGGTGGTGGACGGACGTGGGCA-ACGA---------CATTGGCATAGAAAATTTTGCATACACT-CTCTCCT----------GC-----AC----A-----CACACA--CAAACTC------------------------------------------TCGACGAAAG--TAAAAATAAAAAAAC------------AATAAAT-AAAAATAGCACTC---------------------------------AAACGT--A--------TTTTTGCAGACGGAAATTGAT-T----------------------------------------GGTTGTGT-AAATTGGAAAGTGC-ACGAAA--------------------------TCGC--G---AGCG
droFic1 scf7180000454113:548362-548764 - GGTC-TGCTCTGCTCCGCGGAGTATTTG--TTTCCTCAGCTGCT-------------TTTGTTGGT-GGCTCCA------------AACTATTTGCCA----------GCCAGTT---TTTAACCCAGTTTTC-----G-ATC--AA----------TTA--TAA---TAATAGCAACTAAAAC---GGTG-------------------ATAACTAGTAGATTG----------------------------------G-A--------------------GAGGGGTGC---GTAACAAGAGAGGGTGA--GA------------AGGAGAGTGTTGGCGTTGGTGTC---TCTGTTGTTGTT-GTGCTCGGTGGCGGAC----GTAGGCAAACGA---------CATTGGCATAGAA-ATTTTGCATACACT-CTCTCCT-----------------GC--ACA---------CACCAATA------------------------------------------------CAGAAAG--TAAAAATAAAA-ATA------------AACAAGC-GAAAATAGCACTTAATTTTTCGTTATACG---------TTA-------ACGT--G--------TTTTTGCAGACGGAAATTGAT-T----------------------------------------CGTTGTGTAAAATTGGAAAGTGC-ACGAAA--------------------------TTGC--G---AGCG
droKik1 scf7180000302510:973993-974409 - AGTC-TGC--------ACG---CACTAG--TTTGCCCAGCTGTGGTGTTTTGTTTTTGTTATTGCTCCACTCCA------------AACAAAGACGCG-----CTGCTGCCAGTT---TTTAACCCAGTTTCG-------AGC--TCCGCAGCTCGGCAA--------TGAAAGCAGCTCCGCCGAGACCAACAACAAG--CGCGTCG----CAC-----------------TAGT-GTG-------------------G-A--------------------G--------------------------------AAAGGAGCGCGC-AGCGGGTGTGTGTGTG--TGAT---TTTGTTGTTGTT-GCGCTTGGTGGTGGAC----GGAAGCA-ACGA---------CATTGGCATAGAAAATTTTGCATACTCT-CTCTC------------TC-----TC--CCA---------CAC---CTCTC------------------------------------------ACGTAGAAAG--TAAAAATAAA--AG----CTAAAAATAATT-----------------TGTT----TCCTATACGCTTCGAAAACAA-CAACAAACAT--A--------TACTTGCAGACGGAAATTGAT-C----------------------------------------GGTTGTGT-AAATTGGAAAGTGC-ACAAAAA-------------------------TCGC--G---AGCG
droAna3 scaffold_13337:1918887-1919295 - T--------------CGAG--GTATTTGTATTTGCCCAGCTG-----------------------T-GGATCCA------------AACAAAGACGCGAGTGGTGGCTGCCAGTT---TTTAACCCAGTTTTG-----AA--CG-GA---------------------GTGTCGCGGCCCCAAC---A---------AACACGC---GTAGCCAC-----------------TGGTAGGCGTAGGGATAGATAG----------------------------------------------A--GGGGTTGGAT--GAACGGGCGCGT-----AGTGTACGCT-----------TTTATTGTTGTT-GCGATTGGTGGTGGAC----GGA---G-ACGA---------CATTGGCATAGAAAATTTTGCATACACT-CTCTCCCCCGCTCTCATTCACACCAC----A---------CACCAACACTC------------------------------------------ATGTAGAAAG--TAAAAATAAA--AAATAGCCAAAAATAAACAAGAAAAAAATAACAACAA--------------A---------CAA-AAACTTACGTTGA--------ATTTTGCAGACGGAAG-AAAT-T----------------------------------------GGTT--GT-AAATTGGAAAGTGC-ACGAAGG-------------------------TGGTGAGAGGAACG
droBip1 scf7180000396569:1963752-1964154 - T--------------CGAG--GTATTTGTATTTGCCCAGCTGT-------------------CCAT-GGAGCCA------------AACAAAGACGCGAGTGGTGGCTGCTAGTT---GTTAACCCAGTTTTT-----AA--CG-GA---------------------GTGTCGCGGCCTCAAC---A---------ATTACGC---GTACCCTC-----------------TGGTAGGAG------AAGTGAT-------A--------------------G-----------------A--GGGGGTGGAT--AAACGGTCGCGT-----AGTGCTCGCC-----------TTTGTTGTTGTT-GCGATTGGTGGTGGAC----GGA---G-ACGA---------CATTGGCATAGAAAATTTTGCATACACT-CTCTCCCCCGCTCTCATTCACACCA---------------GACCAACACTC------------------------------------------ATGTAGAAAG--TAAAAATAAA--AAATAGCCAAAAATAAACAA---AAAAATAACAACAA--------------A---------CAA-AAACTTACGTCGA--------CTTTTGCAGACGGAAG-AAAT-T----------------------------------------GGTT--GT-AAATTGGAAAGTGC-ACGAAG--------------------------CTGTGAGAGGAACG
dp5 XR_group3a:1116328-1116562 + GAGTGTC-------------------------------------GTGTT--GTCTGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGG-----------------------------------------------------------------T----GTTGGTGT-GTC--T--T-----------------------GTCT-------------GTGTGTGCCATTGGCATAGAAAATTTTGCATATACA-CA----T----------AC----AACAC--A-----AGCACA--CGCACAC------------------------------------------ATGTAGAAAG--TAAAAATAAA--ATAAACCTAAAAATAATAGACATATATAT-------------------------------------AACATACAT--A--------T-ATTGCAGATACAAATAAAA-T--TTATCGACTCACGGTGGCGT---------------------A--GA-AATTTGGAAAGTGC-ACAAAAG-------------------------TTGC-AG---AGTA
droPer2 scaffold_23:1143953-1144187 + GAGTGTG-------------------------------------GTGTT--GTCTGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGG-----------------------------------------------------------------T----GTTGGTGT-GTC--T--T-----------------------GTCT-------------GTGTGTGCCATTGGCATAGAAAATTTTGCATATACA-CA----T----------AC----AACAC--A-----AGCACA--CGCACAC------------------------------------------ATGTAGAAAG--TAAAAATAAA--ATAAACCTAAAAATAATAGACATATATAT-------------------------------------AACATACAT--A--------T-ATTGCAGATACAAATAAAA-T--TTATCGACTCACGGTGGCGT---------------------A--GA-AATTTGGAAAGTGC-ACAAAAG-------------------------TTGC-AG---AGTA
droVir3 scaffold_13049:10117740-10117974 - TG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGTG------------------A-------------------------------------------------------------------------------AAA----GCAGACA-ACGACAACTGTGCCATTGGCATAGAAAATTTTGCATATACA-TA--CAT----------AC----AAGG------------------------------CGACCAAAAGGG--TCACACACACACACACATTT--ACGCTGA---TTTGAACTTTT---------------------------------------------------------------------AACAATCAT--A--------TAATTGCAGACT-AAACTGAT-A-CAGGGCCAGGGACGTTGACGTCGAC---------GCCATCGTCGTTT-TAATTGGAAAGTGCCAAAAAA-AAT-------AGAAAA-AAATAA--ACGC--C---AGCG
droMoj3 scaffold_6680:10677068-10677328 + AGCA-GTGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGGTGTGGGGGTG------------------A-------------------------------------------------------------------------------AAA----GCAGACA-ACGACAACTGTGCCATTGGCATAGAA-TTTTCGCATGTACA-TA-----------------------C----A---------TACATACAAGG------CAATCAAAAGGG--TCACA---------------------------------GTTACAC-ACA------------CACACAC-TCAAATAGTGTCTCAT----TTTGACGAT---------T----AACAATAAT--A--------TATTTGCAGACAAAA-CTGAC-A-CAGGGCCAGGGACGTTGACGTCGTC---------GCCATCGTCGTGA-TAATTGGAAAGTGGCAAAAAA-AAA-------GCAACAACAGT----AAAC--G---AGCG
droGri2 scaffold_15110:20685060-20685287 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTGGCATAGAAAATTTTGCATGTACA-CA--------------------------------------CACACACACATGCAAAGAAAGCAAAAGGAGCTCACACACACACGCACATTC--A--------------------------------------------------------TTTGATC---------------------TAT-TAACAATAAT--A--------TAATTGCAGACG-AAACTGATATACAGGGCCAGGGACGTTGACGTTGACGTCGCCGTTGCCAACGTCGTAT-AAATTGGAAAGTGGCAAAAAA-AAAGTTAATAGCAACTACAACAATTCAGT--G---AGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GGTC-TGCTCCACTCCGCG--ATATTTG--TTTGCCCAGCTGG---------TCTTTGTTGTTGGT-AGGTCCA------------AACAAACACGCA----------GCCAGTG----TTAACCCAGTTTTT-----G-GGC--TA---------GTGA--------TTGCTGCAGCTCCCAC---GACC---------------------CAGCAGCGGGTTAAATCTAACAGT-GTA------ATAGGGAA----------------------------------------------A--GAGGTTGAAC--G-----------AGGAGAGTGTT---------------G-------TGTTA----TTGGTGGTGGAC----GTGGGCA-ACGA---------CATTGGCATAGAAAATTTTGCATACTCT-CT--CCT----------TC-----GC----A---------CACGCACACCT------------------------------------------TCGTCGAAAGTGTAAAAATAAA--ACA------------AACAAGT-AAAAATAGCACTTGGCTTTTTGTTGTGCC---------TAA-AGTTGTACGT--A--------T-TTTGCAGACGGAAATTGAT-T----------------------------------------GGTTGTGT-AAATTGGAAAGTGC-ACGAAA--------------------------TCGC--G---AGCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............CTCCGCG--ATATTTG--TTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
.....................................AGCTGG---------TCTTTGTTGTTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000001000
.........................................................................................................................................................................................................................................................................................................................................................................TGTTA----TTGGTGGTGGAC----G.................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAT-T----------------------------------------GGTTGTGT-AAATTGGAAAG..................................................2311.00100000001000000000
............................................................................................................................................GGC--TA---------GTGA--------TTGCTGCAGCTTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000001000
...............................................................................................................................................................................................................................................................................................................................................GTT---------------G-------TGTTA----TTGGTGGTGGAG----..................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACCT------------------------------------------TCGTCGAAAGTG.......................................................................................................................................................................................................................................1911.00100100000000000000
............................................................................................................................................................................................................................................................................................................................................................................TA----TTGGTGGTGGAC----GTGGG.............................................................................................................................................................................................................................................................................................................................................................................................1911.00100001000000000000
................................................................................................................................................................................................................................................................................................................................................TT---------------G-------TGTTA----TTGGTGGTGGAC----G.................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAT-T----------------------------------------GGTTGTGT-AAATTGG......................................................2111.00100000000010000000
.......................................................................................................................................................................................................................................................................................................................AC--G-----------AGGAGAGTGTT---------------G-------TGT........................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001000000000000
..............................................................................................................................................C--TA---------GTGA--------TTGCTGCAGCTTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50100000000000001000
.........................................GG---------TCTTTGTTGTTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.05100000000001000000
droSec2
GGTC-TGCTCCACTCCGCG--ATATTTG--TTTGCCCAGCTGG---------TCTTTGTTGTTGGT-AGGTCCA------------AACAAACACGCA----------GCCAGTG----TTAACCCAGTTTTG-----G-GGC--TA---------GTGA--------TTGCTGCAGCTCCCAC---GGCC---------------------CAGCAGCGGGTTAAATATAATAGT-GTA------ATAGGGAA----------------------------------------------A--GAGGTTGAAA--G-----------AGGAGAGTGTT---------------G-------TGTTA----TTGGTGGTGGAC----GTGGGCA-ACGA---------CATTGGCATAGAAAATTTTGCATACTCT-CT--CCT----------TC-----GC----T---------CACGCACACCT------------------------------------------TCGTCGAGAGTGTAAAAATAAA--ACA------------AACAAGT-AAAAATAGCACTTGGCTTGTTGTTGTGCC---------TAA-AGTTGTACGT--A--------T-TTTGCAGACGGAAATTGAT-T----------------------------------------GGTTGTGT-AAATTGGAAAGTGC-ACGAAA--------------------------TCGC--G---AGCGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----------------------------------------GGTTGTGT-AAATTGGAAAGTGC-AC............................................2512.0020020
.................................................................................................................................................................................................................................................................................................................GGTTGAAA--G-----------AGGAGAGTGTT---------------G-------TG.........................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
dm3
GGTC-TGCTCTACTCCGCG--ATATTTG--TTTGCCCAGCTGG---------TCTTTGTTGTTGGT-AGGTCCA------------AACAAACACGCA----------GCCAGTG----TTAACCCAGTTTTG-----G-GGC--TA---------GTGA--------TTGCTGTGGCTCCCAC---GGCC---------------------CAGCAGCGGGTTAAATACGACAGT-GTA------ATTG----------------------------------------------------------TGAAA--G-----------AGGAGAGTGTT---------------G-------TGTTG----TTGGTGGTGGAC----GTGGGCA-ACGA---------CATTGGCATAGAAAATTTTGCATACACT-CT--CCT----------TC-----GC----A---------CACGCACACCT------------------------------------------TCGTCGAAATTGTAAAAATAAA--ACA------------AACAAGT-AAAAATAGCACTTGGCTTGTTGTTGTGCC---------TAA-AGTTGTACGT--A--------T-TTTGCAGACGGAAATTGAT-T----------------------------------------GGTTGTGT-AAATTCGAAAGTGC-ACGAAA--------------------------TCGC--G---AGCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCAGACGGAAATTGAT-T----------------------------------------GGT...................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................CATTGGCATAGAAAATTT...........................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................G----TTGGTGGTGGAC----GTGGGCA-..........................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000100001000000
...........................G--TTTGCCCAGCTGG---------TCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................TTGGTGGTGGAC----GTGGGC............................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGAT-T----------------------------------------GGTTGTGT-AAAT.........................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................G----TTGGTGGTGGAC----GTGGGC............................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000001000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................A------ATTG----------------------------------------------------------TGAAA--G-----------AGGAGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................G--TTTGCCCAGCTGG---------TCTTTGTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----------------------------------------GGTTGTGT-AAATTCGAAAGTGC-..............................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................G----TTGGTGGTGGAC----GTGGGCA-A.........................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------TAA-AGTTGTACGT--A--------T-TTTGCA.............................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ATTTG--TTTGCCCAGCTGG---------TCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTCGAAATTGTAAAAATAAA--ACA------------AA..........................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATTGAT-T----------------------------------------GGTTGTGT-AAATTC.......................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................TG-----G-GGC--TA---------GTGA--------TTGCTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................AGT-GTA------ATTG----------------------------------------------------------TGAAA--G-----------AGGAGAGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................CAC---GGCC---------------------CAGCAGCGGGTTAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................CAGCTGG---------TCTTTGTTGTTGGT-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................G-------TGTTG----TTGGTGGTGGAC----GTGGG.............................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..........................................G---------TCTTTGTTGTTGGT-AGGTCCA------------AACAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GCTCTACTCCGCG--ATATTTG--T.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ATTTG--TTTGCCCAGCTGG---------TCTTTGTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................AGT-GTA------ATTG----------------------------------------------------------TGAAA--G-----------AGGAGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................G--TTTGCCCAGCTGG---------TCTTTGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTGCC---------TAA-AGTTGTACGT--..............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAT-T----------------------------------------GGTTGTGT-AAATTCGAAAGTGC-A.............................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................G--ATATTTG--TTTGCCCAGCTGG---------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................GTT---------------G-------TGTTG----TTGGTGGTGGAC----..................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................AGTTTTG-----G-GGC--TA---------GTGA--------TTGCTGTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
...............................................................................................................................GTTTTG-----G-GGC--TA---------GTGA--------TTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................C----GTGGGCA-ACGA---------CATTGGCATAGAA................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................AGCTGG---------TCTTTGTTGTTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ATATTTG--TTTGCCCAGCTGG---------TCTTTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................GCCCAGCTGG---------TCTTTGTTGTTGGT-A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAATAGCACTTGGCTTGTT...............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGAAAGTGC-ACGAAA--------------------------TCG...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATAGCACTTGGCTTGTTGT.............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................G--ATATTTG--TTTGCCCAGCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................GTTG----TTGGTGGTGGAC----GTGGGCA-..........................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-T----------------------------------------GGTTGTGT-AAATTCGAAAGTGC-..............................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
....................................................................................................................................................................................................................................ACGACAGT-GTA------ATTG----------------------------------------------------------TGAAA--G-----------AG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...C-TGCTCTACTCCGCG--ATATTTG--......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................GTTG----TTGGTGGTGGAC----GTG...............................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..................................................................................................................................TTG-----G-GGC--TA---------GTGA--------TTGCTGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................GTGTT---------------G-------TGTTG----TTGGTGGTGGAC----GTG...............................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATAGCACTTGGCTTGTTGTTGTG.........................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TTTGCAGACGGAAATTGAT-T----------------------------------------......................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..........................................................................................................................................................................................................................................GT-GTA------ATTG----------------------------------------------------------TGAAA--G-----------AGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGT-AAATTCGAAAGTGC-AC............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TGGTGGTGGAC----GTGGGCA-..........................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.......................ATTTG--TTTGCCCAGCTGG---------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAA--ACA------------AACAAGT-AAAAATC.............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................CTGG---------TCTTTGTTGTTGGT-AGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GTC-TGCTCTACTCCGCG--A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................G---------TCTTTGTTGTTGGT-AGGTCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAA-AGTTGTACGT--A--------T-TTTGCAG............................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................AGT-GTA------ATTG----------------------------------------------------------TGAAA--G-----------AG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................G----------------------------------------------------------TGAAA--G-----------AGGAGAGTGTT---------------G-------TGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTGC-ACGAAA--------------------------TCGC--G---AGCG2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................GTT---------------G-------TGTTG----TTGGTGGTGGAC----GTG...............................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
....................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGAC----GTGGGCA-ACG.......................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...............................................................................................................................................................................................................................................A------ATTG----------------------------------------------------------TGAAA--G-----------AGGAGAGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.................................................................T-AGGTCCA------------AACAAACACGCA----------GCCAGTG----.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAT-T----------------------------------------GGTTGTGT-AAAT.........................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTGAT-T----------------------------------------GGTTGTGT-AA...........................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CATACACT-CT--CCT----------TC-----GC----A---------CACG....................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGC-ACGAAA--------------------------TCGC--G---AGC.2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................ATTG----------------------------------------------------------TGAAA--G-----------AGGAGAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...C-TGCTCTACTCCGCG--ATATTTG--TTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAATTGAT-T----------------------------------------GGTTGTGT-A............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................GC--TA---------GTGA--------TTGCTGTGGCTCCCAC---GG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................................................................................................AAA--G-----------AGGAGAGTGTT---------------G-------TGTTG----..................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TGGTGGTGGAC----GTGGGCA-ACGA---------CATTGG.......................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-AAATTCGAAAGTGC-AC............................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAT-T----------------------------------------GGTTGTGT-AAATTCGA.....................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................G--TTTGCCCAGCTGG---------TCTTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................AGCTGG---------TCTTTGTTGTTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................GTA------ATTG----------------------------------------------------------TGAAA--G-----------AGGAGAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................TTG----TTGGTGGTGGAC----GTG...............................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGT-AAATTCGAAAGTGC-A.............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GCCCAGCTGG---------TCTTTGTTGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................TG-----G-GGC--TA---------GTGA--------TTGCTGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...........................................................................................................................................................................................................................................T-GTA------ATTG----------------------------------------------------------TGAAA--G-----------AGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GGTC-TACTCCACTCCGTG--GTATTTG--TTTGCCCAGCTGG---------TCTTTGTTGTTGGT-AGGTCCA------------AACCGAGACGCA----------GCCAGTG----TTAACCCAGTTTTT-----G-GGC--TA---------GTGA--------TTGAAGTAGCTCCCAC---GGTC---------------------CACCAGCGGATTAAACTTAATCGT-GTAG------AAGAGAA----------------------------------------------A--GAGGGTGAAA--G-----------AGGAAAGTGTT---------------------------G----TTGGTGGTGGAC----GTGGGCA-ACGA---------CATTGGCATAGAAAATTTTGCATACACTTCT--CCT----------TC-----GC----A---------CACGCACACTA------------------------------------------TTGTCGAAAGTGTAAAAATAAA--ACA------------AACAAGT-AAAAATAGCACCTGGTTTGCTGTTGTGCC---------TAA-AGTCGTACGT--A--------TTTTTGCAGACGGAAATTGAT-T----------------------------------------GGTTGTGT-AAATTGGAAAGTGC-ACGAAA--------------------------TCGC--G---AGCGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
GGTC-TGGTCTACTCCGCG--ATATTTG--TTTGCCCAGCTGG---------TCTTTGTTGTTGGT-AGGTCTA------------AGCCAAGACGCA----------GCCAGTG----TTAACCCAGTTTTT-----G-AGC--TA---------GTAA--------TTGAAGTAGCTCCCAC---GGTC---------------------CGCCAGCGGGTTAAATTTAATCGT-GAAG------AAGGGAA----------------------------------------------A--GAGGGTGAAT--G-----------AAGAAAGTGTT---------------T-------TGTTG----TTGGTGGTGGAC----GTGGGCA-ACGA---------CATTGGCATAGAAAATTTTGCATACACT-CT--CCT----------TC-----GC----A---------CACGTACACTT------------------------------------------TCGTCGAAAGTGTAAAAATAAA--ACA------------AACAAGT-AAAAATAGCACCTGGTTTGTTGTTGTGCC---------TAA-AGTCGTACGT--A--------TTTTTGCAGACGGAAATTGAT-T----------------------------------------GGTTGTGT-AAATTGGAAAGTGC-ACGAAA--------------------------TCGC--G---AGCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................GGGCA-ACGA---------CATTGGCATAGAAA...............................................................................................................................................................................................................................................................................................................................................................2312.00202000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCC---------TAA-AGTCGTACGT--A--------TTTTTG...............................................................................................................................2312.00201010000000
...............................................................................................................................................................A--------TTGAAGTAGCTCCCAC---GGTC---------------------CGCCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
.................................................................................................................................TTTT-----G-AGC--TA---------GTAA--------TTGAAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGGTTTGTTGTTGTGCC---------..............................................................................................................................................................2011.00110000000000
....................................................................................................................................................................................................................................TTAATCGT-GAAG------AAGGGAA----------------------------------------------A--GAGGGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
.....................................................................................................................................................................................CAC---GGTC---------------------CGCCAGCGGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.25100100000000
droEug1
GGTC-TCGTCTGGTCCACG--GTACTTA--TTTGCCCAGCTGCT-------------GTTGTTGGT-AGGTCCA------------AACAAAGACGCA----------GCTAGTT---TATAACCCAGTTTTGGTTTTG-GGC-CTT---------GTGATAAAA---TGAAAGCAGCTTCAAC---GGTC---------------------CTCTTGTGAGTTAAAGTT-------GAAG------GAGTGAAATTTGGAA--------------------G--AGGTGGTGTATATGAAGAGAG---G-A-GG------------AGGAGAGTGTTTGCGTT--TGAC---GTTTTTTTTGTTG-TGATTGGTGGTGGAC----GTAGGCA-ACGA---------CATTGGCATAGAAAATTTTGCATACACT-CT--CCT----------TT-----AC----A---------CACACACACTT------------------------------------------TCGTTGAAAG--TAAAAATAAA--AAA------------AATACGT-AAAAATAGCACTTGCGTTGTTGTTGTACC---------CAA-AAACGTATGT--A--------TCTTTGCAGACGGAAATTGAT-T----------------------------------------GGTTGTGT-AAATTGGAAAGTGC-ACGAAA--------------------------TCGC--G---AGCGSizeHit CountTotal NormTotal
No Reads
droBia1
GCTC-AGCTCTGCTCCACG--CTATTTG--TTTGCCCAGCTGCT-------------GTTGTTGGT-AGGTTCGAACTCACGTCCAAACAAAGACGC--------------AGTG---CTTAACCCAGTTTCC-----G-GGC--C------------GA---AGTAATAGA--CGACT-TAAC---GGTC---------------------TACTAGTGGGCTAAAGTG-------CGGG------GAGTGCAC----GAAGAAGA-----GTGGGGGTGG----------------GAA---A---CG-A-GG------------AGGAGAGTGTT---------------TT------TGTTG----TTGGTGGTGCAC----G-------ACGA---------CATTGGCATAGAAAACTTTGCATACCCT-TC----T----------AC-----CC--ACACTCTCCGCACA--CACACGC------------------------------------------TCGTCGAAAGTGTAAAAATAAAA-ATA------------AACAAGT-AAAAATAGCACCTGAACTGTTTGTGTACC---------CAA-AACCGTATGT--ATTT-----CTTTTGCAGACGGAAATTGAT-T----------------------------------------GGTTGTGT-AAATTGGAAAGTGC-ACGAAA--------------------------TCGC--G---AGCGSizeHit CountTotal NormTotal
No Reads
droTak1
GAGC-TCCTCTACTCCACG--CTGTTTA--TTTGCCCAGCTGCTGAG-----TGCTGTTTGTTGGT-AGGTTCAAATTCAAAACCAAACAAAGA------------------GTTTAGTTTAACCCAGTTTCT-----G-AGC--CC---------GTGA--------CGAAGGCAGCTTAA-----AA--------------------------------------CCCAA-------AG------GAGTGTAA----GAAGAAGAGTGGT--GGGGGTGG----------------GAAAAGAA---G-T-GG------------GGGAGAGTGTT---------------TT------TGTTG----TTGGTGGTGGAC----GTAGGCAAACGA---------CATTGGCATAGAAAATTTTGCATACACT-CT--CCT----------TC-----CC--ACAC---ACGCACA--CACACTC--------------------------------------TCTCTCGACGAAAGTGTAAAAATAAA--ACA------------AACAAGT-AAAAATAGCACTTGGTTTGTTGTTGTGCC---------CAAAAAACGTATGT--ATTTCTCTTTTTTTGCAGACGGAAATTGAT-T----------------------------------------GGTTGTGT-AAATTGGAAAGTGC-ACGAAA--------------------------TCGC--G---AGCGSizeHit CountTotal NormTotal
No Reads
droEle1
GTG---GAAATACTCCACAT-ATATTTGTATTTGTCCAGCTGCT-------------GTTGTTGCT-GGCTCCA------------AACAAATACGCA----------ACCAGTT---TTTAACCCAGTTTCT-----AAGGC--T----------CCAA--------AGAAATCAGCTCCAAA---AGTCACAGCAAA--------------------------------GTTGT-GTG-------------------GCA--------------------GAAAGGTGG---G--TGAA--GAGTGCGA--GA------------AGGAGAGTGTTTTCTTT--TGCC---CTTTTTGTTGTTG-TTGGTGGTGGTGGACGGACGTGGGCA-ACGA---------CATTGGCATAGAAAACTTTGCATACACT-CTCTCC------------T-----GC----A---------CACCTACACTC------------------------------------------TCGTCAAAAG--TAAAAATAAAAAACA------------AATAAAT-AAAAATAGCACTTG---------------------------------AACGT--A--------TTTTTGCAGACGGAAATTGAT-T----------------------------------------GGTTGTGT-AAATTGGAAAGTGC-ACGAAA--------------------------TCGC--G---AGCGSizeHit CountTotal NormTotal
No Reads
droRho1
GTA---GTAATACTCCACGCACTATATA--TTTGCACAGCTGAT-------------GTTGTTGTT-GGCTCCA------------AACAAATACGCA----------GCCAACT---TTTAACCCAGTTTTA-----AAGGC--TC---------CCAA--------AGAAATCAGCTCCAAA---AGTCACAACAAA--CTCATCG-----------------CACTCAAGGGT-ACAG------GAGTAAA-------A--------------------GAGAGGTGG---G--TGAA--GAGTGAG--AGA------------GGGAGAGTGTTTTCTTT--TGGT---TTTCT---TGTTG----TTGGTGGTGGACGGACGTGGGCA-ACGA---------CATTGGCATAGAAAATTTTGCATACACT-CTCTCCT----------GC-----AC----A-----CACACA--CAAACTC------------------------------------------TCGACGAAAG--TAAAAATAAAAAAAC------------AATAAAT-AAAAATAGCACTC---------------------------------AAACGT--A--------TTTTTGCAGACGGAAATTGAT-T----------------------------------------GGTTGTGT-AAATTGGAAAGTGC-ACGAAA--------------------------TCGC--G---AGCGSizeHit CountTotal NormTotal
No Reads
droFic1
GGTC-TGCTCTGCTCCGCGGAGTATTTG--TTTCCTCAGCTGCT-------------TTTGTTGGT-GGCTCCA------------AACTATTTGCCA----------GCCAGTT---TTTAACCCAGTTTTC-----G-ATC--AA----------TTA--TAA---TAATAGCAACTAAAAC---GGTG-------------------ATAACTAGTAGATTG----------------------------------G-A--------------------GAGGGGTGC---GTAACAAGAGAGGGTGA--GA------------AGGAGAGTGTTGGCGTTGGTGTC---TCTGTTGTTGTT-GTGCTCGGTGGCGGAC----GTAGGCAAACGA---------CATTGGCATAGAA-ATTTTGCATACACT-CTCTCCT-----------------GC--ACA---------CACCAATA------------------------------------------------CAGAAAG--TAAAAATAAAA-ATA------------AACAAGC-GAAAATAGCACTTAATTTTTCGTTATACG---------TTA-------ACGT--G--------TTTTTGCAGACGGAAATTGAT-T----------------------------------------CGTTGTGTAAAATTGGAAAGTGC-ACGAAA--------------------------TTGC--G---AGCGSizeHit CountTotal NormTotal
No Reads
droKik1
AGTC-TGC--------ACG---CACTAG--TTTGCCCAGCTGTGGTGTTTTGTTTTTGTTATTGCTCCACTCCA------------AACAAAGACGCG-----CTGCTGCCAGTT---TTTAACCCAGTTTCG-------AGC--TCCGCAGCTCGGCAA--------TGAAAGCAGCTCCGCCGAGACCAACAACAAG--CGCGTCG----CAC-----------------TAGT-GTG-------------------G-A--------------------G--------------------------------AAAGGAGCGCGC-AGCGGGTGTGTGTGTG--TGAT---TTTGTTGTTGTT-GCGCTTGGTGGTGGAC----GGAAGCA-ACGA---------CATTGGCATAGAAAATTTTGCATACTCT-CTCTC------------TC-----TC--CCA---------CAC---CTCTC------------------------------------------ACGTAGAAAG--TAAAAATAAA--AG----CTAAAAATAATT-----------------TGTT----TCCTATACGCTTCGAAAACAA-CAACAAACAT--A--------TACTTGCAGACGGAAATTGAT-C----------------------------------------GGTTGTGT-AAATTGGAAAGTGC-ACAAAAA-------------------------TCGC--G---AGCGSizeHit CountTotal NormTotal
No Reads
droAna3
T--------------CGAG--GTATTTGTATTTGCCCAGCTG-----------------------T-GGATCCA------------AACAAAGACGCGAGTGGTGGCTGCCAGTT---TTTAACCCAGTTTTG-----AA--CG-GA---------------------GTGTCGCGGCCCCAAC---A---------AACACGC---GTAGCCAC-----------------TGGTAGGCGTAGGGATAGATAG----------------------------------------------A--GGGGTTGGAT--GAACGGGCGCGT-----AGTGTACGCT-----------TTTATTGTTGTT-GCGATTGGTGGTGGAC----GGA---G-ACGA---------CATTGGCATAGAAAATTTTGCATACACT-CTCTCCCCCGCTCTCATTCACACCAC----A---------CACCAACACTC------------------------------------------ATGTAGAAAG--TAAAAATAAA--AAATAGCCAAAAATAAACAAGAAAAAAATAACAACAA--------------A---------CAA-AAACTTACGTTGA--------ATTTTGCAGACGGAAG-AAAT-T----------------------------------------GGTT--GT-AAATTGGAAAGTGC-ACGAAGG-------------------------TGGTGAGAGGAACGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................................................................................................GTGTCGCGGCCCCAAC---A---------AACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.....................................................................................................................................................................................................................AC-----------------TGGTAGGCGTAGGGATAGATA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
............................................................................................................................................................................................................................................................AG----------------------------------------------A--GGGGTTGGAT--GAACGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
............................................................................................................................................................................CGCGGCCCCAAC---A---------AACACGC---G....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGGAAAGTGC-ACGAAGG-------------------------C.............2111.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGAAAGTGC-ACGAAGG-------------------------TG............2111.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAAGAAAAAAATAACAAA........................................................................................................................................................................................21190.051010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAA--------------A---------CAA-AAACTA....................................................................................................................................................18200.051010000
droBip1
T--------------CGAG--GTATTTGTATTTGCCCAGCTGT-------------------CCAT-GGAGCCA------------AACAAAGACGCGAGTGGTGGCTGCTAGTT---GTTAACCCAGTTTTT-----AA--CG-GA---------------------GTGTCGCGGCCTCAAC---A---------ATTACGC---GTACCCTC-----------------TGGTAGGAG------AAGTGAT-------A--------------------G-----------------A--GGGGGTGGAT--AAACGGTCGCGT-----AGTGCTCGCC-----------TTTGTTGTTGTT-GCGATTGGTGGTGGAC----GGA---G-ACGA---------CATTGGCATAGAAAATTTTGCATACACT-CTCTCCCCCGCTCTCATTCACACCA---------------GACCAACACTC------------------------------------------ATGTAGAAAG--TAAAAATAAA--AAATAGCCAAAAATAAACAA---AAAAATAACAACAA--------------A---------CAA-AAACTTACGTCGA--------CTTTTGCAGACGGAAG-AAAT-T----------------------------------------GGTT--GT-AAATTGGAAAGTGC-ACGAAG--------------------------CTGTGAGAGGAACGSizeHit CountTotal NormTotal
No Reads
dp5
GAGTGTC-------------------------------------GTGTT--GTCTGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGG-----------------------------------------------------------------T----GTTGGTGT-GTC--T--T-----------------------GTCT-------------GTGTGTGCCATTGGCATAGAAAATTTTGCATATACA-CA----T----------AC----AACAC--A-----AGCACA--CGCACAC------------------------------------------ATGTAGAAAG--TAAAAATAAA--ATAAACCTAAAAATAATAGACATATATAT-------------------------------------AACATACAT--A--------T-ATTGCAGATACAAATAAAA-T--TTATCGACTCACGGTGGCGT---------------------A--GA-AATTTGGAAAGTGC-ACAAAAG-------------------------TTGC-AG---AGTASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAATTTTGCATATACA-CA----..........................................................................................................................................................................................................................................................................................................................................2111.0010010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACA--CGCACAC------------------------------------------ATGTAGAAA..........................................................................................................................................................................................................................................2011.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................T-----------------------GTCT-------------GTGTGTGCCATTGGC......................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
droPer2
GAGTGTG-------------------------------------GTGTT--GTCTGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGG-----------------------------------------------------------------T----GTTGGTGT-GTC--T--T-----------------------GTCT-------------GTGTGTGCCATTGGCATAGAAAATTTTGCATATACA-CA----T----------AC----AACAC--A-----AGCACA--CGCACAC------------------------------------------ATGTAGAAAG--TAAAAATAAA--ATAAACCTAAAAATAATAGACATATATAT-------------------------------------AACATACAT--A--------T-ATTGCAGATACAAATAAAA-T--TTATCGACTCACGGTGGCGT---------------------A--GA-AATTTGGAAAGTGC-ACAAAAG-------------------------TTGC-AG---AGTASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................TGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGG-----------------------------------------------------------------T----GTTGGTGT-GTC--.................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
GAGTGTG-------------------------------------GTGTT--GTCTGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGG-----------------------------------------------------------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
droVir3
TG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGTG------------------A-------------------------------------------------------------------------------AAA----GCAGACA-ACGACAACTGTGCCATTGGCATAGAAAATTTTGCATATACA-TA--CAT----------AC----AAGG------------------------------CGACCAAAAGGG--TCACACACACACACACATTT--ACGCTGA---TTTGAACTTTT---------------------------------------------------------------------AACAATCAT--A--------TAATTGCAGACT-AAACTGAT-A-CAGGGCCAGGGACGTTGACGTCGAC---------GCCATCGTCGTTT-TAATTGGAAAGTGCCAAAAAA-AAT-------AGAAAA-AAATAA--ACGC--C---AGCGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------GCCATCGTCGTTT-TAATTGGA.....................................................2211.001000000000001000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAA-AAATAA--ACGC--C---AGC.1811.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGACGTCGAC---------GCCATCGT...................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATCGTCGTTT-TAATTGG......................................................1911.001000000000000000000000000000000000000000000000000000000000000100
droMoj3
AGCA-GTGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGGTGTGGGGGTG------------------A-------------------------------------------------------------------------------AAA----GCAGACA-ACGACAACTGTGCCATTGGCATAGAA-TTTTCGCATGTACA-TA-----------------------C----A---------TACATACAAGG------CAATCAAAAGGG--TCACA---------------------------------GTTACAC-ACA------------CACACAC-TCAAATAGTGTCTCAT----TTTGACGAT---------T----AACAATAAT--A--------TATTTGCAGACAAAA-CTGAC-A-CAGGGCCAGGGACGTTGACGTCGTC---------GCCATCGTCGTGA-TAATTGGAAAGTGGCAAAAAA-AAA-------GCAACAACAGT----AAAC--G---AGCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...A-GTGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGGTGTGGGGGTG------------------A-------------------------------------------------------------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................ATAGAA-TTTTCGCATGTACA-TA-----------------------C----A---------TA......................................................................................................................................................................................................................................................................................................2611.001000001
droGri2
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTGGCATAGAAAATTTTGCATGTACA-CA--------------------------------------CACACACACATGCAAAGAAAGCAAAAGGAGCTCACACACACACGCACATTC--A--------------------------------------------------------TTTGATC---------------------TAT-TAACAATAAT--A--------TAATTGCAGACG-AAACTGATATACAGGGCCAGGGACGTTGACGTTGACGTCGCCGTTGCCAACGTCGTAT-AAATTGGAAAGTGGCAAAAAA-AAAGTTAATAGCAACTACAACAATTCAGT--G---AGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 11:01 PM