ID:

dsi_217

 Coordinate:

node_5674:7719-7802 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.7 -16.4 -16.3 -16.3

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
TIRANT_I-intLTRGypsy+

Sense Strand Reads

TTTCGTTGGCGTAGTTTATTATAACTGACCCATTAACAATGAGGTCAGTGCCGTTTGTCAAGGAGATTATAAGGTTGTCAACGTTGAACGCAAAAATGTAGCCCGCTTCTGCCTCGAACACATCGGCGATAGGGACGGTCTCTCGTACATTGCAAGAACCATTTTCGTCGTTTAGAAGGTGTGC
***************************************************.((........((((......(((((((..((((((..........((((.......))))..........)))))).....)))))))))))..))************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 SRR902009
testis
 O002
Head
 O001
Testis
 SRR618934
dsim w501 ovaries
 M025
embryo
 M053
female body
.................................................................................................................................................TACATTGCAAGAACCATTTTCGTCGTT............ 27 0 1 111.00 111 60 6 31 2 8 2 0 0 0 2 0
..................................................................TTATAAGGTTGTCAACGTTGAACGCAAA.......................................................................................... 28 0 1 98.00 98 56 25 12 5 0 0 0 0 0 0 0
.............................................................................................................TGCCTCGAACACATCGGCGATAGGGA................................................. 26 0 1 68.00 68 33 14 16 4 0 0 0 0 1 0 0
..................................................................TTATAAGGTTGTCAACGTTGAACGCAAAAA........................................................................................ 30 0 1 26.00 26 17 0 7 2 0 0 0 0 0 0 0
...................................................................TATAAGGTTGTCAACGTTGAACGCAAA.......................................................................................... 27 0 1 22.00 22 16 3 1 2 0 0 0 0 0 0 0
..................................................CCGTTTGTCAAGGAGATT.................................................................................................................... 18 0 1 20.00 20 0 0 0 0 0 0 12 8 0 0 0
..................................................................TTATAAGGTTGTCAACGTTGAACGCAA........................................................................................... 27 0 1 18.00 18 12 4 2 0 0 0 0 0 0 0 0
..................................................................TTATAAGGTTGTCAACGTTGAACGCAAAA......................................................................................... 29 0 1 18.00 18 14 2 1 1 0 0 0 0 0 0 0
...................................................................TATAAGGTTGTCAACGTTGAACGCAAAAA........................................................................................ 29 0 1 15.00 15 9 1 4 1 0 0 0 0 0 0 0
...........................................................................................................TCTGCCTCGAACACATCGGCGATAGGGA................................................. 28 0 1 12.00 12 5 5 2 0 0 0 0 0 0 0 0
.....................................................................TAAGGTTGTCAACGTTGAACGCAAA.......................................................................................... 25 0 1 12.00 12 7 2 3 0 0 0 0 0 0 0 0
................................................TGCCGTTTGTCAAGGAGATTATAAGG.............................................................................................................. 26 0 1 12.00 12 6 2 4 0 0 0 0 0 0 0 0
......................................................................................................................................................TGCAAGAACCATTTTCGTCGTTTAGA........ 26 0 1 11.00 11 3 6 1 0 0 1 0 0 0 0 0
......................................................................................................................................................TGCAAGAACCATTTTCGTCGTTTAGAAGG..... 29 0 1 10.00 10 7 0 2 1 0 0 0 0 0 0 0
................................................TGCCGTTTGTCAAGGAGATTATAAGGT............................................................................................................. 27 0 1 10.00 10 5 2 0 3 0 0 0 0 0 0 0
................TATTATAACTGACCCATTAACAATGAG............................................................................................................................................. 27 0 1 9.00 9 6 1 2 0 0 0 0 0 0 0 0
..........................................................................................................................TCGGCGATAGGGACGGTCTCTCGTACAT.................................. 28 0 1 8.00 8 3 0 0 0 2 3 0 0 0 0 0
.................................................................................................................................................TACATTGCAAGAACCATTTTCGTCGT............. 26 0 1 8.00 8 2 0 2 1 2 1 0 0 0 0 0
.....................................................................................................................................................TTGCAAGAACCATTTTCGTCGTT............ 23 0 1 7.00 7 3 1 3 0 0 0 0 0 0 0 0
..........................................................................................................TTCTGCCTCGAACACATCGGCGATAGG................................................... 27 0 1 7.00 7 0 5 0 1 0 0 0 0 0 0 1
......................................................................................................................................................TGCAAGAACCATTTTCGTCGTT............ 22 0 1 6.00 6 3 0 2 0 0 1 0 0 0 0 0
..............................................................................................................................................TCGTACATTGCAAGAACCATTTTCGTCGTT............ 30 0 1 6.00 6 5 0 1 0 0 0 0 0 0 0 0
.................................................................................................................TCGAACACATCGGCGATAGGGACGGTC............................................ 27 0 1 6.00 6 0 0 0 0 4 2 0 0 0 0 0
................TATTATAACTGACCCATTAACAATGA.............................................................................................................................................. 26 0 1 6.00 6 2 4 0 0 0 0 0 0 0 0 0
.....................................................TTTGTCAAGGAGATTATAAGGTTGTC......................................................................................................... 26 0 1 4.00 4 3 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TGCCTCGAACACATCGGCGATAGG................................................... 24 0 1 4.00 4 1 0 1 2 0 0 0 0 0 0 0
..................................................................TTATAAGGTTGTCAACGTTGAACGC............................................................................................. 25 0 1 4.00 4 1 1 1 1 0 0 0 0 0 0 0
.....................................................................TAAGGTTGTCAACGTTGAACGCAAAAA........................................................................................ 27 0 1 4.00 4 2 1 0 0 0 0 0 0 1 0 0
...................................................................................................................................................CATTGCAAGAACCATTTTCGTCGTT............ 25 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0
................................................................................................TGTAGCCCGCTTCTGCCTCGAACACATC............................................................ 28 0 1 4.00 4 1 2 1 0 0 0 0 0 0 0 0
..........................................................................................................TTCTGCCTCGAACACATCGGCGATAGGGA................................................. 29 0 1 4.00 4 2 0 1 1 0 0 0 0 0 0 0
......................................................................................................................................................TGCAAGAACCATTTTCGTCGTTTAGAA....... 27 0 1 3.00 3 0 1 0 0 0 0 0 0 0 2 0
............................................TCAGTGCCGTTTGTCAAGGAGATTATA................................................................................................................. 27 0 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TTGCAAGAACCATTTTCGTCGTTTAGA........ 27 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0
...................................................................TATAAGGTTGTCAACGTTGAACGCAA........................................................................................... 26 0 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0
....................................................................................TGAACGCAAAAATGTAGCCCGCTTC........................................................................... 25 0 1 3.00 3 0 1 0 0 1 1 0 0 0 0 0
.....................................AATGAGGTCAGTGCCGTTTGTCAAGGAGA...................................................................................................................... 29 0 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0
................................................................................................TGTAGCCCGCTTCTGCCTCGAACAC............................................................... 25 0 1 3.00 3 0 0 0 0 1 2 0 0 0 0 0
..................................................................TTATAAGGTTGTCAACGTTGAACGCA............................................................................................ 26 0 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0
...........................................................................TGTCAACGTTGAACGCAAAAATGTAGC.................................................................................. 27 0 1 3.00 3 1 1 0 0 1 0 0 0 0 0 0
...................................................CGTTTGTCAAGGAGATTATAAGGT............................................................................................................. 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.......................................................TGTCAAGGAGATTATAAGGTTGTCAAC...................................................................................................... 27 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................TTTTCGTCGTTTAGAAGGTGTGC 23 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
...................................................................TATAAGGTTGTCAACGTTGAACGCA............................................................................................ 25 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0
..................................................CCGTTTGTCAAGGAGATTA................................................................................................................... 19 0 1 2.00 2 0 0 0 0 0 0 0 2 0 0 0
...............................................................................................................................................CGTACATTGCAAGAACCATTTTCGTCGTT............ 29 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
....................................................................ATAAGGTTGTCAACGTTGAACGCAAA.......................................................................................... 26 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
............................................TCAGTGCCGTTTGTCAAGGAGATTA................................................................................................................... 25 0 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0
............................................................................................................................GGCGATAGGGACGGTCTCTCGTACA................................... 25 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0
..................................................CCGTTTGTCAAGGAGATTATAAGG.............................................................................................................. 24 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
.....................................................................TAAGGTTGTCAACGTTGA................................................................................................. 18 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0
..............................................................................................................................................TCGTACATTGCAAGAACCATTTTCGTC............... 27 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................AGAACCATTTTCGTCGTTTAGAAGG..... 25 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
..........................................................................................................................TCGGCGATAGGGACGGTCTCTCGTAC.................................... 26 0 1 2.00 2 0 0 0 0 1 1 0 0 0 0 0
...................................................................................................................GAACACATCGGCGATAGGGACGGTCTC.......................................... 27 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................TCTCGTACATTGCAAGAACCATTTTC.................. 26 0 1 2.00 2 0 1 0 0 1 0 0 0 0 0 0
.......................................TGAGGTCAGTGCCGTTTGTCAAGGAGA...................................................................................................................... 27 0 1 2.00 2 0 0 0 1 0 0 0 0 1 0 0
..............................................................................................................................................................CCATTTTCGTCGTTTAGAAGGTGTGC 26 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0
...............TTATTATAACTGACCCATTAACAATGA.............................................................................................................................................. 27 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................AGAACCATTTTCGTCGTT............ 18 0 1 2.00 2 0 0 0 0 0 0 0 0 2 0 0
.................................................................................................................................................TACATTGCAAGAACCATTTTCGTCGTTT........... 28 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0
..................................................................TTATAAGGTTGTCAACGTTGAAC............................................................................................... 23 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................AAGAACCATTTTCGTCGTTTAGAAGG..... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................CGATTGGGACGGTCT........................................... 15 1 2 1.50 3 0 3 0 0 0 0 0 0 0 0 0
..TCGTTGGCGTAGTTTATTATAACTGACC.......................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1
................TATTATAACTGACCCATTAACAATGAGGA........................................................................................................................................... 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................TGAACGCAAAAATGTAGCCCGCTT............................................................................ 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................TCGAACACATCGGCGATAGGGACGGT............................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................TGATAAGGTTGTCAACGTTGAACGCAAAA......................................................................................... 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................ATTTTCGTCGTTTAGAAGGTG... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.TTCGTTGGCGTAGTTTATTATAACTGA............................................................................................................................................................ 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................CTCGAACACATCGGCGATAGGGACGG.............................................. 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................TTTCGTCGTTTAGAAGGTGTG. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
............................................................................................................................GGCGATAGGGACGGTCTCTCGTACAT.................................. 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................TGCCTGGAACACATCGGCGATAGGGA................................................. 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................TGTCAACGTTGAACGCAAAAATGT..................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................TCAAGGAGATTATAAGGTTGT.......................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
.......................................................................................................CGCTTCTGCCTCGAACACATCGGCGA....................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................GTACATTGCAAGAACCATTTTCGTCGTT............ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................CAGTGCCGTTTGTCAAGGAGATTATA................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
..................................................................TTATAAGGTTGTCAACGTTGAA................................................................................................ 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................TATAAGGTTGTCAACGTTGAACACAAA.......................................................................................... 27 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................AATGTAGCCCGCTTCTGCCTCGAACA................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................TGAACGCAAAAATGTAGCCCGCT............................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................TGTCAAGGAGATTATAAGGTTGTC......................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TGCCTCGAACACATCGGC......................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................ATTGCAAGAACCATTTTCGTCGTTTAGA........ 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.................................................................ATTATAAGGTTGTCAACGTTGAACGCAA........................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CATTGCAAGAACCATTTTCGTCG.............. 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................CATTTTCGTCGTTTAGAAGGTGTGC 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................TACATTGCAAGAACCATTTTCGTCGTA............ 27 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..............................................AGTGCCGTTTGTCAAGGAGATTATAAGG.............................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............TTTATTATAACTGACCCATTAACAATG............................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.................................TAACAATGAGGTCAGTGCCGTTTGT.............................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................CCGTTTGTCAAGGAGATTATAAGGT............................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................CGAACACATCGGCGATAGGGA................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................TCGGCGATAGGGACGGTCTCTCGTA..................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................ATCGGCGATTGGGACG............................................... 16 1 2 1.00 2 0 0 0 2 0 0 0 0 0 0 0
..TCGTTGGCGTAGTTTATTATAACTGA............................................................................................................................................................ 26 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
.............................................................................................................................................................ACCATTTTCGTCGTTTAGAAGGTGTG. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................TTGTCAACGTTGAACGCAAAAATGT..................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................AGGTTGTCAACGTTGAACGCAAAAA........................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TAAATTGCAAGAACCATTTTCGTCGTT............ 27 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................TTCCTCGAACACATCGGCGATAGGGA................................................. 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................CAAGAACCATTTTCGTCGTTTAGAAGG..... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................GCTTCTGCCTCGAACACATCGGC......................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................ATGTAGCCCGCTTCTGCCTCGAACACA.............................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................TCGGCGATAGGGACGGTCTCTCGTACA................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..TCGTTGGCGTAGTTTATTATAA................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................................................GCCGTTTGTCAAGGAGATTATAAGGT............................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................TTATAAGGTTGTCAACGTTGAACG.............................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................TTGAACGCAAAAATGTAGCCCGCTTC........................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................................CCTCGAACACATCGGCGATAGGGACGGTC............................................ 29 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..................................AACAATGAGGTCAGTGCCGTTTGTCAA........................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
........................................................................................CGCAAAAATGTAGCCCGCTTCTGCCTC..................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................TTTGTCAAGGAGATTATAAGGTTGT.......................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
..........................................................................................................TTCTGCCTCGAACACATCGGC......................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................ACATCGGCGATAGGGACGGTCTCTCG....................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................TTATAAGGTTGTCAAAGTTGAACGCAA........................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TCTCGTACATTGCAAGAACCATTT.................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.....................................................................TAAGGTTGTCAACGTTGAACGCAAAA......................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................TGCCGTTTGTCAAGGAGA...................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...............TTATTATAACTGACCCATTAACAATG............................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................TATTATAACTGACCCATTAACAATGAGG............................................................................................................................................ 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................CATCGGCGATAGGGACGGTCTCTC........................................ 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
TTTCGTTGGCGTAGTTTATTATAA................................................................................................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................TGTCAACGTTGAACGCAAAAATGTAGCCCG............................................................................... 30 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................CTCGAACACATCGGCGATAGGGACGGT............................................. 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................TACATTGCAAGAACCATTTTCCTCGTT............ 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................TGAACGCAAAAATGTA.................................................................................... 16 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
..............................................................................................AATGTAGCCCGCTTCTGCCTCGAACAC............................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...................................................CGTTTGTCAAGGAGATTATAAGGTT............................................................................................................ 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................CCATTTTCGTCGTTTAGAAGGTGTG. 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
...................TATAACTGACCCATTAACAATGAGG............................................................................................................................................ 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................TACATTGCAAGAACCATTTTCGGCGTT............ 27 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
......TGGCGTAGTTTATTATAACT.............................................................................................................................................................. 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................TTGCAAGAACCATTTTCGTCGTTTAGAAA...... 29 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1
..................................................................................................................................AGGGACGGTCTCTCGTACATTGCAAGAACC........................ 30 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................TACATTGCGAGAACCATTTTCGTCGTT............ 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TCTCGTACATTGCAAGAACCATTTTCGTCGTT............ 32 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
............................................................................GTCAACGTTGAACGCAAAA......................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
......................................................................AAGGTTGTCAACGTTGAACGCAAAAA........................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TCGTACATTGCAAGAACCATTTTCGTCGT............. 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
................................................................................................TGTAGCCCGCTTCTGCCTCGAACACAT............................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................TGCCGTTTGTCAAGGAGATT.................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................CCGCTTCTGCCTCGAACACATCGGCGA....................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...........................................GTCAGTGCCGTTTGTCAAGGAGA...................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTCTGCCTCGAACACATCGGCGATAGGG.................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................TGTCAACGTTGAACGCAAAAATGTAGCC................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TACATTGCAAGAACCATTTTCGTC............... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................................AGGTCAGTGCCGTTTGTCAAGGAGA...................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................TGTCAACGTTGAACGCAAAAATGTAG................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................TCGAACACATCGGCGATAGGGACG............................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....................................AATGAGGTCAGTGCCGTTTGTCAA........................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.................................................................ATTATAAGGTTGTCAACGTTGAACGCA............................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................TTGAACGCAAAAATGTAGCCC................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1
..................................................................................................................................................ACATTGCAAGAACCATTTTCGTCGTT............ 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................................TCGAACACATCGGCGATAGGGACGGTCTC.......................................... 29 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
....................................................................................................................AACACATCGGCGATAGGGACGGTCTCTCG....................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TGCCTCGAACACATCGGCGATAGGGACG............................................... 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
....................................................................................TGAACGCAAAAATGTAGCCCGCTA............................................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................TGTCAACGTTGAACGCAAAA......................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.................ATTATAACTGACCCATTAACAATGAG............................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TCGTACATTGCAAGAACCATTTTCGTCG.............. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................TCGAACACATCGGCGATAGGGA................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................CGTTTGTCAAGGAGATTATA................................................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................AGGGACGGTCTCTCGTACATTGCAAGA........................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................CCCGCTTCTGCCTCGAACACATCGGCGA....................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................TCTTCCTCGAACACATCGGCGATAGGGA................................................. 28 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.......................................TGAGGTCAGTGCCGTTTGTCAAGGAG....................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................GAACACATCGGCGATAGGGACGG.............................................. 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
................................................TGCCGTTTGTCAAGGAGATTATAAGGTA............................................................................................................ 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................CATTGCAAGAACCATTTTCGTC............... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................CCATTTTCGTCGTTTAGAAGGTGT.. 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
....................................................................................TGAACGCAAAAATGTAGCCCGCTGC........................................................................... 25 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................................TGCAAGAACCATTTTCGTCGTTTAG......... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..................................................................TTATAAGGTTGTCAACGTTGAACGGAAA.......................................................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................GGAGATTATAAGGTTGTCAACGTT................................................................................................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..................................................................TTATAAGGTTGTCAACGTTGAACGAAAA.......................................................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................AGATTATAAGGTTGTCAACGTTGAACGC............................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TGCCTCGAACACATCGGCGATAGGGACGGT............................................. 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................ATAAGGTTGTCAACGTTGAACGCAAAAA........................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TGCAAGAACCATTTTCGTCGTTT........... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................TCGAACACATCGGCGATAGGGACGGTCT........................................... 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................TCTCGTACATTGCAAGAACCAT...................... 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................TCGTCGATTGGGACGGTCT........................................... 19 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................CGATCGGGACGGTCTC.......................................... 16 1 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................TCGGAGATAGGGACG............................................... 15 1 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................GATTGGGACGGTCTC.......................................... 15 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................TCGATTGGGACGGTCTC.......................................... 17 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................TCGGCGATTGGGACG............................................... 15 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0
.....................................................TTTGTCAAGGAGTTTAAAA................................................................................................................ 19 2 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................CGATTGGGACGGTCTCG......................................... 17 2 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................ATCGGCGATTGGGAC................................................ 15 1 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................TGGTCGATTGGGACGGTCTC.......................................... 20 3 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................TCGATTGGGACGGTCT........................................... 16 2 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0
...........................................................................................................................GGTCGATTGGGACGGTCTC.......................................... 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................TTAGTAGTTTAGAAGG..... 16 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

AAAGCAACCGCATCAAATAATATTGACTGGGTAATTGTTACTCCAGTCACGGCAAACAGTTCCTCTAATATTCCAACAGTTGCAACTTGCGTTTTTACATCGGGCGAAGACGGAGCTTGTGTAGCCGCTATCCCTGCCAGAGAGCATGTAACGTTCTTGGTAAAAGCAGCAAATCTTCCACACG
************************************.((........((((......(((((((..((((((..........((((.......))))..........)))))).....)))))))))))..))*************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 SRR902009
testis
 M025
embryo
 M053
female body
............................GGGTAATTGTTACTCCAGTCACGGCAA................................................................................................................................. 27 0 1 3.00 3 0 2 0 0 1 0 0 0 0
............................................................................................................................................AGAGCATGTAACGTTCTTGGTAAA.................... 24 0 1 3.00 3 0 1 2 0 0 0 0 0 0
................ATAATATTGACTGGGTAATTGTTACT.............................................................................................................................................. 26 0 1 2.00 2 0 0 0 1 1 0 0 0 0
........................................................................................................CGAAGACGGAGCTTGTGTAGCCGCTAT..................................................... 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0
..........................................................................................................................AGCCGCTATCCCTGCCAGAGAGCATGT................................... 27 0 1 2.00 2 0 0 1 0 1 0 0 0 0
............................................................................................................................................AGAGCATGTAACGTTCTTGGTAAAAGC................. 27 0 1 2.00 2 0 1 0 0 1 0 0 0 0
.......................................ACTCCAGTCACGGCAAACAGT............................................................................................................................ 21 0 1 2.00 2 0 0 0 0 0 1 1 0 0
..........................................CCAGTCACGGCAAACAGTTCCTCTAA.................................................................................................................... 26 0 1 2.00 2 0 0 0 2 0 0 0 0 0
.................................................................................................................................ATCCCTGCCAGAGAGCATGTAACGT.............................. 25 0 1 2.00 2 0 2 0 0 0 0 0 0 0
..........................................................................................GTTTTTACATCGGGCGAAGA.......................................................................... 20 0 1 2.00 2 0 0 0 0 0 0 2 0 0
...................................................................................................................................CCCTGCCAGAGAGCATGTAACGTTCT........................... 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0
.....................................................................................................GGGCGAAGACGGAGCTTGTGTAGCCGC........................................................ 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0
............................GGGTAATTGTTACTCCAGTCACGGCA.................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0
....................................................................................................................................CCTGCCAGAGAGCATGTAACGTTCT........................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
........CGCATCAAATAATATTGACTGGGTAAT..................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................GGCAAACAGTTCCTCTAATATTCCAACAG......................................................................................................... 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0
......................................................................................................GGCGAAGACGGAGCTTGTGTAGCCGC........................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...............................................................................TTGCAACTTGCGTTTTTACA..................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................TCCTCTAATATTCCAACAGTTGCAACTT................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................CGGAGAGCATGTAACGTTCTTGGTAGA.................... 27 2 1 1.00 1 1 0 0 0 0 0 0 0 0
...........ATCAAATAATATTGACTGGGTAATTGTT................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................................AGACGGAACTTGTGTAGCCGCTATCCCTGC............................................... 30 1 1 1.00 1 0 0 1 0 0 0 0 0 0
..............................................................................................................CGGAGCTTGTGTAGCCGCTATCC................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................TCCCTGCCAGAGAGCATGTAACGT.............................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................CCCTGCCAGAGAGCATGTAACGTT............................. 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................CAGAGAGCATGTAACGTTCTTGGTAAA.................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
........................................................................................................CGAAGACGGAGCTTGTGT.............................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................TGGGTAATTGTTACTCCAGTCACGGCAA................................................................................................................................. 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0
............................................................................................................................................AGAGCATGTAACGTTCTTGGTAA..................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................................GTCACGGCAAACAGTTCCTCTAAT................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 1 0
..................................................................................................................................TCCCTGCCAGAGAGCATGTAACGTTCT........................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0
............................GGGTAATTGTTACTCCAGTCA....................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.................................................................................................................................ATCCCTGCCAGAGAGCATGTAACGTTCT........................... 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0
...............................................................................................................................CTATCCCTGCCAGAGAGCAT..................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0
........................................................CAGTTCCTCTAATATTCCAACAGT........................................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................ATATCCCTGCCAGAGAGCATGTAACGTT............................. 28 1 1 1.00 1 0 0 0 1 0 0 0 0 0
.................................................................................................................................ATCCCTGCCAGAGAGCATGTAACGTT............................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0
........................................................................................................................GTAGCCGCTATCCCTGCCAGAGAGC....................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................GGGTAATTGTTACTCCAGTCACTTC................................................................................................................................... 25 2 1 1.00 1 0 0 1 0 0 0 0 0 0
..AGCAACCGCATCAAATAATATTGACT............................................................................................................................................................ 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0
............................................................................................................................................AGAGCATGTAACGTTCTTGGTAAAA................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.................................................................................................................................ATCGCTGCCAGAGAGCATGTAACGTTCT........................... 28 1 1 1.00 1 0 0 0 0 1 0 0 0 0
.................................................................................................................................ATCCCTGCCAGAGAGCATGTAACGTTCTT.......................... 29 0 1 1.00 1 0 0 0 0 0 0 0 0 1
..............................................................................................................................GCTATCCCTGCCAGAGAGCAT..................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0
..................................................................................................................................TCCCTGCCAGAGAGCATGTAACGTTCTT.......................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................CCCTGCCAGAGGGCATGTAACGT.............................. 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0
.....................................................................................................GGGCGAAGACGGAGCTTGTGTAGCCG......................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0
................................................................................................................................TATCCCTGCCAGAGAGCATGTAACGT.............................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..............................................................................................TTACATCGGGCGAAGACGGAGCTT.................................................................. 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0
......................................................................TTCCAACAGTTGCAACT................................................................................................. 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................CAAACAGTTCCTCTAATATTCCAACAGT........................................................................................................ 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.........................................................................................................................................CGGAGAGCATGTAACGTTCTTGGTAAA.................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................................ATATTCCAACAGTTGCAACT................................................................................................. 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.....................................................................................................................TGTGTAGCCGCTATCCCTGCCAGAGAGCAT..................................... 30 0 1 1.00 1 0 0 1 0 0 0 0 0 0
..........................................................................................................................................AGAGAGCATGTAACGTTCTTGGTAAA.................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0
..........................................CCAGTCACGGCAAACAGTTCCTCTAATAT................................................................................................................. 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0
...................................................................................................................................CCCTGCCAGAGAGCATGTAACGTTCTTG......................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.............................................................................................................................CGCTATCCCTGCCAGAGAGCATGTAA................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...............................................................................................................GGAGCTTGTGTAGCCG......................................................... 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................CAGAGAGCATGTAACGTTCTTGGTAA..................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0
................................................................................................ACATCGGGCGAAGACGGAGCTTGTGT.............................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................AGAGAGCATGTAACGTTCTTGGTAA..................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................CGTTCTTGGTAAAAGCAGCAAATCTT....... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0
............................................................................................................GACGGAGCTTGTGTAGCCGCTATCCCT................................................. 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0
...............................................................................................................GGAGCTTGTGTAGCCGCTATCCCTGCC.............................................. 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.....................................................................................TTTGCGTTTTTACATCGGGCGAAGA.......................................................................... 25 1 1 1.00 1 0 0 0 0 0 1 0 0 0
.......................................................................................................................TGTAGGGGCTATCCCTGTCA............................................. 20 3 6 0.17 1 1 0 0 0 0 0 0 0 0
................................................................................................................................TATCCCTGCCCGAGAA........................................ 16 2 20 0.05 1 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 node_5674:7669-7852 - dsi_217 TTTCGTTGGCGTAGTTTATTATAACTGACCCATTAACAATGAGGTCAGTGCCGTTTGTCAAGGAGATTATAAGGTTGTCAACGTTGAACGCAAAAATGTAGCCCGCTTCTGCCTCGAACACATCGGCGATAGGGACGGTCTCTCGTACATTGCAAGAA-CC---AT-TT-----------TCGTCGTTTAGAAGG----------------------------------------------------------------------------------------------------------------------------------------------------------TGTGC
droSec2 scaffold_16:1873338-1873521 + TA-------------------------------------------------------------------------------------------------------------------------------------------------CATCGCAGGAA-CT---GT-TT-----------TCTCCGTTCAAAAGGTGTTCCAGGCATGTGTTGTTCTGTGG--TGTATC-AACATAGAAGT---TCTCGTCGCACAAGAATGTATCATCCAGTT-TGGGGCATTTACGGGTCATATGA--ATTTTCTTATTATTAATATTATAAGCTAGGTAATTCGGGGTTATTACAAAATAT
dm3 chr3LHet:1946908-1947089 + CA-------------------------------------------------------------------------------------------------------------------------------------------------CATTACAGGAA-CT---AT--------------TCTCCGTTCAAAAGGTGTGCCAGGCATGTATTTTTGTGTGG--TGTGTC-GTTATAAAATT---CCTCGTCGCACAAGAATGTTTCGTCCAGTT-TGGGACATTTACGGGTAATATGG--TATTTCTTATTATTAATATTATAAGCTAGATAGTTTGGGGTTATTACAAAATAT
droEre2 scaffold_3124:7104-7287 + CA-------------------------------------------------------------------------------------------------------------------------------------------------CATTACAGGAA-CT---GT-TT-----------TCGCCGTTTAAAAGATTTGTCAGGCATGTATTATTTTGCGG--TGTGTC-GATAAAAAAGT---CTTCGTCGCACAAGAATGTGTCATCCAGCT-TAAGGCATTTCCGTGTCATATGA--TATTTCTTATTATTAGTGTTATAAGCTAAGTAGTTTGGGGTAATTATAAAATAA
droYak3 v2_chrUn_001:398071-398254 + CA-------------------------------------------------------------------------------------------------------------------------------------------------CATTGCAGGAA-CT---GT-TT-----------TCGCCGTTTAAAAGATTTGTCAGGCATGTATTATTTTGCGG--TGTGTC-GATAACAAAGT---CTTCGTCGCACAGGAATGTGCCATCCAGCT-TAGGGTATTTCCGTGTCATATGA--TATTTCTTATTATTAGTGTTATAGGCTAGGTAGTTTGGGGTAATTATAAAATAA
droEug1 scf7180000407371:5478-5661 - CA-------------------------------------------------------------------------------------------------------------------------------------------------CATCGCATTTT-GTTTCCT-TT-----------GCGTTCTTGACGATGTCCGACAGGCATCTGTTGTTTTTGGT--CACCAT-ATCCATATGCG---TTTTTTCGCAGAAAAACTCCCGCTCCACTT-TAAGACAGCTTTCATGAAATTGGTGAAA-----GGTGTTGTTGGCATGTGCCAGGAATTCCGGGGAAATGATGAAGTGT
droBia1 scf7180000301426:17270-17300 + TA-------------------------------------------------------------------------------------------------------------------------------------------------TTATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCTAGGTAAGTCAACATACATA
droTak1 scf7180000415229:427450-427633 - CA-------------------------------------------------------------------------------------------------------------------------------------------------CATCGCATTTT-GTTTCCT-TT-----------GCGTTCTTGACGATGTCCGACAGGCATCTGTTGTTTTTGGC--CACCAT-ATCCATATGCG---TTTTTTCGCAGAAAAACTCCCGCTCCACTT-TAAGACAGCTTTCGTGAAATTGGTGAAA-----GGTGTTGTTGGCATGTGCCAGGAATTCCGGGGAAATGATGAAGTGT
droEle1 scf7180000490100:1750-1943 - TC-------------------------------------------------------------------------------------------------------------------------------------------------CCTCTAAATTT-ACTGAAT-CGCATATTGGTGGTTGTTCGTTAAAATCTTCCTCAAGCACTCCTTCCTTTT------GTCTC-AACACCCAACTCTTCGCTCTCACAAATAAAAGTTTCATGAACTT-TTGAACATTGGTTGTTAAAGAAACTTAT-----TTTATACTTATTAATTGCTACATAATTTGGTATTATTAATAAATGA
droRho1 scf7180000778112:5902-6085 + CA-------------------------------------------------------------------------------------------------------------------------------------------------TGTCACATTTTTGTCTCTT-TT-----------TCGTTTTTGATAATGTCTGACAGGCATTTGTTGTTTTTTGT--TGTCGA-TTCCGTGTGGA---TTCCCTGGCAGAAGAACTCTTGTTCCACCT-TAAGACAGCTTT-GCGAAATTGATGTAT-----AGTGTTGTTATCATGTGCCAAGAATTCGGGGGAAATTATAAAATGT
droFic1 scf7180000454182:26344-26528 + CA-------------------------------------------------------------------------------------------------------------------------------------------------TGTCACATTTT-GTCTCTT-TT-----------ACGTTATTGACGATGTCTGCCAGGCACTTGTTGTTTTTCAT--CGTCGG-GTCAGCGTGGA---TTCCCTGACAGAAGAACTCGTGTTCTACTTTTAAGGCAGCTTTCGCGAAATTGATGTAA-----AGTGTTGTTATTATGTGCCAAGAATTCGGGGGAAATGATGAAACGC
droKik1 scf7180000300517:4223-4409 + TA-------------------------------------------------------------------------------------------------------------------------------------------------CGTCACATGTT-TCCGGAC-TT-----------ATTTTATTCAGTAGGTTGTTTAGGCATTTTTGTGTTACTGAATGTAGGATTGTATCTTTCG---GTTTTTTACAGAACATTGTTTTGTTAATCA-TTATGCATTTGGAGTTAAATTCTTTTGT-----AGACTCTTTATTATGAGCCACGAAATTTGGTGCTTTTACGAATTTA
droBip1 scf7180000393710:2634-2820 + AG-------------------------------------------------------------------------------------------------------------------------------------------------TGGCGCAAAAG-CGGGGTA-CC-----------TCCTTATTCTAGAGGTGATTCAGGCAGTCTGATGTCGCTGAGCCAACGTACCCTCCTCGTG---CTTTTTTGCAGTATAGGTTTCTGTCTATCT-CCGGGCATCTTTTGTCAAATTCTAAGGT-----TACATTTTTGCGGTGTGCCACGAATTTGGGTGTGCTCACGAACCGG
dp5 Unknown_group_38:25519-25691 - TGA------------------------------------------------------------------------------------------------------------------------------------------------TATTGCAAGTC-GC---TT-TG-----------TTATTGTTGAGTAGGTTGATTAGACAGTCTGGATTTGTCGG--T----------GCTGTCG---GGGTTTCACATACATGCAATTTGCCCAGTT-TGATACAAGGTGAATTTAAAATCTTAAT-----TTCTAGCTTATTTCTAATAATGTATTGTGGGAGAATTACAAATTTT
droPer2 scaffold_1886:2003-2187 - AG-------------------------------------------------------------------------------------------------------------------------------------------------TGTTGCAGGTG-GC---AACCA-----------TGGTTATTGAAAATACCCTCTAGGCATTGTTGATTGATGTT--ATTTGG-TGGTGTCGTAT---TATCTTCGCAGATGTAATTATGGTGTATTT-TGGGGCATTTTATATCGAAGCTTTTTAT--GTGTCCGGAATGGTCGTGTATAATATACTTAGGTAAGATTAATAACATA
droWil2 scf2_1100000004818:43461-43636 + TCGATG---------------------------------------------------------------------------------------------------------------------------------------------CGTTGCAAGTC-GC---CA-TA-----------CTGTTGTTAAGTAGGTTTGGTAGGCAGTGGGGATTTGTAGG------------TAAAGTTG---GGGTCTCACATACATATAATTTGCCCAATT-TAATACATGGTGAGTTTAATTCCTTAAT-----TGTTAGCTTATTTCGAATAATGTGTCTTGGTAGTGTTACAAATTTT
droVir3 scaffold_12723:361865-362048 + GA-------------------------------------------------------------------------------------------------------------------------------------------------TGTCGCTTGTT-GC---CG-TT-----------TGGTAAAAGAGAATGCTTTTAAGACGGTGGCTATTGACTAA--GTTCGT-TTGTGTAAATG---TGTTTTCGCATATAAATGTCTGATGTACTT-AGGGACATTTGTTTTCAAAGTACAAGATTTATC--CGTGTTGGTCGTATAAGATGTAGTTTGGTACTATCAGAAATTTA
droMoj3 scaffold_6541:826221-826398 - AA-------------------------------------------------------------------------------------------------------------------------------------------------TGTCGCATGTT-GT---CG-TT-----------TCTTCGTTTAGAATGCCCTTTAGGCACTGTTGGTTGATTG--------C-TGGAGTAATGT---TGTCTTCGCAGATATATGACTGATGGACTT-TCGGACACTTGCTACTTATTTCTTTGAT--AATGCCAGCTTGGTTATGTATTACATATTTTGGTAAAATTAATATTTTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTTCGTTGGCGTAGTTTATTATAACTGACCCATTAACAATGAGGTCAGTGCCGTTTGTCAAGGAGATTATAAGGTTGTCAACGTTGAACGCAAAAATGTAGCCCGCTTCTGCCTCGAACACATCGGCGATAGGGACGGTCTCTCGTACATTGCAAGAA-CC---AT-TT-----------TCGTCGTTTAGAAGG----------------------------------------------------------------------------------------------------------------------------------------------------------TGTGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................TACATTGCAAGAA-CC---AT-TT-----------TCGTCGTT......................................................................................................................................................................271111.001110020003160260082000
..................................................................TTATAAGGTTGTCAACGTTGAACGCAAA....................................................................................................................................................................................................................................................................28198.009800000012565250000000
.............................................................................................................TGCCTCGAACACATCGGCGATAGGGA...........................................................................................................................................................................................................................26168.006800000016334141000000
..................................................................TTATAAGGTTGTCAACGTTGAACGCAAAAA..................................................................................................................................................................................................................................................................30126.0026000000717200000000
...................................................................TATAAGGTTGTCAACGTTGAACGCAAA....................................................................................................................................................................................................................................................................27122.0022000000116230000000
..................................................CCGTTTGTCAAGGAGATT..............................................................................................................................................................................................................................................................................................18120.0020000081200000000000
..................................................................TTATAAGGTTGTCAACGTTGAACGCAA.....................................................................................................................................................................................................................................................................27118.0018000000212040000000
..................................................................TTATAAGGTTGTCAACGTTGAACGCAAAA...................................................................................................................................................................................................................................................................29118.0018000000114120000000
...................................................................TATAAGGTTGTCAACGTTGAACGCAAAAA..................................................................................................................................................................................................................................................................29115.001500000049110000000
...........................................................................................................TCTGCCTCGAACACATCGGCGATAGGGA...........................................................................................................................................................................................................................28112.001200000025050000000
.....................................................................TAAGGTTGTCAACGTTGAACGCAAA....................................................................................................................................................................................................................................................................25112.001200000037020000000
................................................TGCCGTTTGTCAAGGAGATTATAAGG........................................................................................................................................................................................................................................................................................26112.001200000046020000000
......................................................................................................................................................TGCAAGAA-CC---AT-TT-----------TCGTCGTTTAGA..................................................................................................................................................................26111.001100000013060001000
......................................................................................................................................................TGCAAGAA-CC---AT-TT-----------TCGTCGTTTAGAAGG----------------------------------------------------------------------------------------------------------------------------------------------------------.....29110.001000000027100000000
................................................TGCCGTTTGTCAAGGAGATTATAAGGT.......................................................................................................................................................................................................................................................................................27110.001000000005320000000
................TATTATAACTGACCCATTAACAATGAG.......................................................................................................................................................................................................................................................................................................................2719.00900000026010000000
..........................................................................................................................TCGGCGATAGGGACGGTCTCTCGTACAT............................................................................................................................................................................................................2818.00800000003000023000
.................................................................................................................................................TACATTGCAAGAA-CC---AT-TT-----------TCGTCGT.......................................................................................................................................................................2618.00800000022100021000
.....................................................................................................................................................TTGCAAGAA-CC---AT-TT-----------TCGTCGTT......................................................................................................................................................................2317.00700000033010000000
..........................................................................................................TTCTGCCTCGAACACATCGGCGATAGG.............................................................................................................................................................................................................................2717.00700010000150000000
......................................................................................................................................................TGCAAGAA-CC---AT-TT-----------TCGTCGTT......................................................................................................................................................................2216.00600000023000001000
..............................................................................................................................................TCGTACATTGCAAGAA-CC---AT-TT-----------TCGTCGTT......................................................................................................................................................................3016.00600000015000000000
.................................................................................................................TCGAACACATCGGCGATAGGGACGGTC......................................................................................................................................................................................................................2716.00600000000000042000
................TATTATAACTGACCCATTAACAATGA........................................................................................................................................................................................................................................................................................................................2616.00600000002040000000
.....................................................TTTGTCAAGGAGATTATAAGGTTGTC...................................................................................................................................................................................................................................................................................2614.00400000003010000000
.............................................................................................................TGCCTCGAACACATCGGCGATAGG.............................................................................................................................................................................................................................2414.00400000011200000000
..................................................................TTATAAGGTTGTCAACGTTGAACGC.......................................................................................................................................................................................................................................................................2514.00400000011110000000
.....................................................................TAAGGTTGTCAACGTTGAACGCAAAAA..................................................................................................................................................................................................................................................................2714.00400000002011000000
...................................................................................................................................................CATTGCAAGAA-CC---AT-TT-----------TCGTCGTT......................................................................................................................................................................2514.00400000004000000000
................................................................................................TGTAGCCCGCTTCTGCCTCGAACACATC......................................................................................................................................................................................................................................2814.00400000011020000000
..........................................................................................................TTCTGCCTCGAACACATCGGCGATAGGGA...........................................................................................................................................................................................................................2914.00400000012100000000
......................................................................................................................................................TGCAAGAA-CC---AT-TT-----------TCGTCGTTTAGAA.................................................................................................................................................................2713.00300200000010000000
............................................TCAGTGCCGTTTGTCAAGGAGATTATA...........................................................................................................................................................................................................................................................................................2713.00300000001020000000
.....................................................................................................................................................TTGCAAGAA-CC---AT-TT-----------TCGTCGTTTAGA..................................................................................................................................................................2713.00300000002010000000
...................................................................TATAAGGTTGTCAACGTTGAACGCAA.....................................................................................................................................................................................................................................................................2613.00300000012000000000
....................................................................................TGAACGCAAAAATGTAGCCCGCTTC.....................................................................................................................................................................................................................................................2513.00300000000010011000
.....................................AATGAGGTCAGTGCCGTTTGTCAAGGAGA................................................................................................................................................................................................................................................................................................2913.00300000012000000000
................................................................................................TGTAGCCCGCTTCTGCCTCGAACAC.........................................................................................................................................................................................................................................2513.00300000000000012000
..................................................................TTATAAGGTTGTCAACGTTGAACGCA......................................................................................................................................................................................................................................................................2613.00300000001020000000
...........................................................................TGTCAACGTTGAACGCAAAAATGTAGC............................................................................................................................................................................................................................................................2713.00300000001010010000
...................................................CGTTTGTCAAGGAGATTATAAGGT.......................................................................................................................................................................................................................................................................................2412.00200000002000000000
.......................................................TGTCAAGGAGATTATAAGGTTGTCAAC................................................................................................................................................................................................................................................................................2712.00200000001100000000
.....................................................................................................................................................................T-TT-----------TCGTCGTTTAGAAGG----------------------------------------------------------------------------------------------------------------------------------------------------------TGTGC2312.00200000020000000000
...................................................................TATAAGGTTGTCAACGTTGAACGCA......................................................................................................................................................................................................................................................................2512.00200000001100000000
..................................................CCGTTTGTCAAGGAGATTA.............................................................................................................................................................................................................................................................................................1912.00200002000000000000
...............................................................................................................................................CGTACATTGCAAGAA-CC---AT-TT-----------TCGTCGTT......................................................................................................................................................................2912.00200000002000000000
....................................................................ATAAGGTTGTCAACGTTGAACGCAAA....................................................................................................................................................................................................................................................................2612.00200000001010000000
............................................TCAGTGCCGTTTGTCAAGGAGATTA.............................................................................................................................................................................................................................................................................................2512.00200000000110000000
............................................................................................................................GGCGATAGGGACGGTCTCTCGTACA.............................................................................................................................................................................................................2512.00200000000000020000
..................................................CCGTTTGTCAAGGAGATTATAAGG........................................................................................................................................................................................................................................................................................2412.00200000000020000000
.....................................................................TAAGGTTGTCAACGTTGA...........................................................................................................................................................................................................................................................................1812.00200000000200000000
..............................................................................................................................................TCGTACATTGCAAGAA-CC---AT-TT-----------TCGTC.........................................................................................................................................................................2712.00200000000020000000
..........................................................................................................................................................AGAA-CC---AT-TT-----------TCGTCGTTTAGAAGG----------------------------------------------------------------------------------------------------------------------------------------------------------.....2512.00200000000020000000
..........................................................................................................................TCGGCGATAGGGACGGTCTCTCGTAC..............................................................................................................................................................................................................2612.00200000000000011000
...................................................................................................................GAACACATCGGCGATAGGGACGGTCTC....................................................................................................................................................................................................................2712.00200000001000001000
............................................................................................................................................TCTCGTACATTGCAAGAA-CC---AT-TT-----------TC............................................................................................................................................................................2612.00200000000010010000
.......................................TGAGGTCAGTGCCGTTTGTCAAGGAGA................................................................................................................................................................................................................................................................................................2712.00200000000101000000
...............................................................................................................................................................CC---AT-TT-----------TCGTCGTTTAGAAGG----------------------------------------------------------------------------------------------------------------------------------------------------------TGTGC2612.00200000001000010000
...............TTATTATAACTGACCCATTAACAATGA........................................................................................................................................................................................................................................................................................................................2712.00200000001010000000
..........................................................................................................................................................AGAA-CC---AT-TT-----------TCGTCGTT......................................................................................................................................................................1812.00200000000002000000
.................................................................................................................................................TACATTGCAAGAA-CC---AT-TT-----------TCGTCGTTT.....................................................................................................................................................................2812.00200000001000001000
..................................................................TTATAAGGTTGTCAACGTTGAAC.........................................................................................................................................................................................................................................................................2312.00200000001010000000
.........................................................................................................................................................AAGAA-CC---AT-TT-----------TCGTCGTTTAGAAGG----------------------------------------------------------------------------------------------------------------------------------------------------------.....2612.00200000002000000000
..TCGTTGGCGTAGTTTATTATAACTGACC....................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
................TATTATAACTGACCCATTAACAATGAGGA.....................................................................................................................................................................................................................................................................................................................2911.00100000001000000000
....................................................................................TGAACGCAAAAATGTAGCCCGCTT......................................................................................................................................................................................................................................................2411.00100000000000010000
.................................................................................................................TCGAACACATCGGCGATAGGGACGGT.......................................................................................................................................................................................................................2611.00100000001000000000
....................................................................................................................................................................AT-TT-----------TCGTCGTTTAGAAGG----------------------------------------------------------------------------------------------------------------------------------------------------------TG...2111.00100000000000010000
.TTCGTTGGCGTAGTTTATTATAACTGA......................................................................................................................................................................................................................................................................................................................................2711.00100000000100000000
................................................................................................................CTCGAACACATCGGCGATAGGGACGG........................................................................................................................................................................................................................2611.00100000000000010000
.......................................................................................................................................................................TT-----------TCGTCGTTTAGAAGG----------------------------------------------------------------------------------------------------------------------------------------------------------TGTG.2111.00100000000001000000
............................................................................................................................GGCGATAGGGACGGTCTCTCGTACAT............................................................................................................................................................................................................2611.00100000000000010000
...........................................................................TGTCAACGTTGAACGCAAAAATGT...............................................................................................................................................................................................................................................................2411.00100000000010000000
.........................................................TCAAGGAGATTATAAGGTTGT....................................................................................................................................................................................................................................................................................2111.00100000000001000000
.......................................................................................................CGCTTCTGCCTCGAACACATCGGCGA.................................................................................................................................................................................................................................2611.00100000000010000000
................................................................................................................................................GTACATTGCAAGAA-CC---AT-TT-----------TCGTCGTT......................................................................................................................................................................2811.00100000001000000000
.............................................CAGTGCCGTTTGTCAAGGAGATTATA...........................................................................................................................................................................................................................................................................................2611.00100000000001000000
..................................................................TTATAAGGTTGTCAACGTTGAA..........................................................................................................................................................................................................................................................................2211.00100000000010000000
..............................................................................................AATGTAGCCCGCTTCTGCCTCGAACA..........................................................................................................................................................................................................................................2611.00100000001000000000
....................................................................................TGAACGCAAAAATGTAGCCCGCT.......................................................................................................................................................................................................................................................2311.00100000001000000000
.......................................................TGTCAAGGAGATTATAAGGTTGTC...................................................................................................................................................................................................................................................................................2411.00100000001000000000
.............................................................................................................TGCCTCGAACACATCGGC...................................................................................................................................................................................................................................1811.00100000000010000000
....................................................................................................................................................ATTGCAAGAA-CC---AT-TT-----------TCGTCGTTTAGA..................................................................................................................................................................2811.00100000010000000000
.................................................................ATTATAAGGTTGTCAACGTTGAACGCAA.....................................................................................................................................................................................................................................................................2811.00100000001000000000
...................................................................................................................................................CATTGCAAGAA-CC---AT-TT-----------TCGTCG........................................................................................................................................................................2311.00100000000000010000
................................................................................................................................................................C---AT-TT-----------TCGTCGTTTAGAAGG----------------------------------------------------------------------------------------------------------------------------------------------------------TGTGC2511.00100000010000000000
.................................................................................................................................................TACATTGCAAGAA-CC---AT-TT-----------TCGTCGTA......................................................................................................................................................................2711.00100000000000001000
..............................................AGTGCCGTTTGTCAAGGAGATTATAAGG........................................................................................................................................................................................................................................................................................2811.00100000001000000000
..............TTTATTATAACTGACCCATTAACAATG.........................................................................................................................................................................................................................................................................................................................2711.00100000000010000000
.................................TAACAATGAGGTCAGTGCCGTTTGT........................................................................................................................................................................................................................................................................................................2511.00100000000010000000
..................................................CCGTTTGTCAAGGAGATTATAAGGT.......................................................................................................................................................................................................................................................................................2511.00100000001000000000
..................................................................................................................CGAACACATCGGCGATAGGGA...........................................................................................................................................................................................................................2111.00100000001000000000
..........................................................................................................................TCGGCGATAGGGACGGTCTCTCGTA...............................................................................................................................................................................................................2511.00100000001000000000
..TCGTTGGCGTAGTTTATTATAACTGA......................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
.............................................................................................................................................................A-CC---AT-TT-----------TCGTCGTTTAGAAGG----------------------------------------------------------------------------------------------------------------------------------------------------------TGTG.2611.00100000001000000000
..........................................................................TTGTCAACGTTGAACGCAAAAATGT...............................................................................................................................................................................................................................................................2511.00100000000010000000
.......................................................................AGGTTGTCAACGTTGAACGCAAAAA..................................................................................................................................................................................................................................................................2511.00100000000010000000
........................................................................................................................................................CAAGAA-CC---AT-TT-----------TCGTCGTTTAGAAGG----------------------------------------------------------------------------------------------------------------------------------------------------------.....2711.00100000000010000000
........................................................................................................GCTTCTGCCTCGAACACATCGGC...................................................................................................................................................................................................................................2311.00100000001000000000
...............................................................................................ATGTAGCCCGCTTCTGCCTCGAACACA........................................................................................................................................................................................................................................2711.00100000001000000000
..........................................................................................................................TCGGCGATAGGGACGGTCTCTCGTACA.............................................................................................................................................................................................................2711.00100000000000010000
..TCGTTGGCGTAGTTTATTATAA..........................................................................................................................................................................................................................................................................................................................................2211.00100000001000000000
.................................................GCCGTTTGTCAAGGAGATTATAAGGT.......................................................................................................................................................................................................................................................................................2611.00100000001000000000
..................................................................TTATAAGGTTGTCAACGTTGAACG........................................................................................................................................................................................................................................................................2411.00100000001000000000
...................................................................................TTGAACGCAAAAATGTAGCCCGCTTC.....................................................................................................................................................................................................................................................2611.00100000000000001000
...............................................................................................................CCTCGAACACATCGGCGATAGGGACGGTC......................................................................................................................................................................................................................2911.00100000000000001000
..................................AACAATGAGGTCAGTGCCGTTTGTCAA.....................................................................................................................................................................................................................................................................................................2711.00100000000010000000
........................................................................................CGCAAAAATGTAGCCCGCTTCTGCCTC...............................................................................................................................................................................................................................................2711.00100000000010000000
.....................................................TTTGTCAAGGAGATTATAAGGTTGT....................................................................................................................................................................................................................................................................................2511.00100100000000000000
..........................................................................................................TTCTGCCTCGAACACATCGGC...................................................................................................................................................................................................................................2111.00100000000100000000
.......................................................................................................................ACATCGGCGATAGGGACGGTCTCTCG.................................................................................................................................................................................................................2611.00100000001000000000
............................................................................................................................................TCTCGTACATTGCAAGAA-CC---AT-TT-----------..............................................................................................................................................................................2411.00100000000100000000
.....................................................................TAAGGTTGTCAACGTTGAACGCAAAA...................................................................................................................................................................................................................................................................2611.00100000001000000000
................................................TGCCGTTTGTCAAGGAGA................................................................................................................................................................................................................................................................................................1811.00100000010000000000
...............TTATTATAACTGACCCATTAACAATG.........................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
................TATTATAACTGACCCATTAACAATGAGG......................................................................................................................................................................................................................................................................................................................2811.00100000000100000000
........................................................................................................................CATCGGCGATAGGGACGGTCTCTC..................................................................................................................................................................................................................2411.00100000000100000000
TTTCGTTGGCGTAGTTTATTATAA..........................................................................................................................................................................................................................................................................................................................................2411.00100000000010000000
...........................................................................TGTCAACGTTGAACGCAAAAATGTAGCCCG.........................................................................................................................................................................................................................................................3011.00100000000100000000
................................................................................................................CTCGAACACATCGGCGATAGGGACGGT.......................................................................................................................................................................................................................2711.00100000000000010000
....................................................................................TGAACGCAAAAATGTA..............................................................................................................................................................................................................................................................1611.00100000000001000000
..............................................................................................AATGTAGCCCGCTTCTGCCTCGAACAC.........................................................................................................................................................................................................................................2711.00100000000010000000
...................................................CGTTTGTCAAGGAGATTATAAGGTT......................................................................................................................................................................................................................................................................................2511.00100000010000000000
...............................................................................................................................................................CC---AT-TT-----------TCGTCGTTTAGAAGG----------------------------------------------------------------------------------------------------------------------------------------------------------TGTG.2511.00100000000000001000
...................TATAACTGACCCATTAACAATGAGG......................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
......TGGCGTAGTTTATTATAACT........................................................................................................................................................................................................................................................................................................................................2011.00100000000100000000
.....................................................................................................................................................TTGCAAGAA-CC---AT-TT-----------TCGTCGTTTAGAAA................................................................................................................................................................2911.00100010000000000000
..................................................................................................................................AGGGACGGTCTCTCGTACATTGCAAGAA-CC---..............................................................................................................................................................................................3011.00100000010000000000
............................................................................................................................................TCTCGTACATTGCAAGAA-CC---AT-TT-----------TCGTCGTT......................................................................................................................................................................3211.00100000010000000000
............................................................................GTCAACGTTGAACGCAAAA...................................................................................................................................................................................................................................................................1911.00100000010000000000
......................................................................AAGGTTGTCAACGTTGAACGCAAAAA..................................................................................................................................................................................................................................................................2611.00100000000010000000
..............................................................................................................................................TCGTACATTGCAAGAA-CC---AT-TT-----------TCGTCGT.......................................................................................................................................................................2911.00100000010000000000
................................................................................................TGTAGCCCGCTTCTGCCTCGAACACAT.......................................................................................................................................................................................................................................2711.00100000001000000000
................................................TGCCGTTTGTCAAGGAGATT..............................................................................................................................................................................................................................................................................................2011.00100000000010000000
......................................................................................................CCGCTTCTGCCTCGAACACATCGGCGA.................................................................................................................................................................................................................................2711.00100000010000000000
...........................................GTCAGTGCCGTTTGTCAAGGAGA................................................................................................................................................................................................................................................................................................2311.00100000001000000000
..........................................................................................................TTCTGCCTCGAACACATCGGCGATAGGG............................................................................................................................................................................................................................2811.00100000000010000000
...........................................................................TGTCAACGTTGAACGCAAAAATGTAGCC...........................................................................................................................................................................................................................................................2811.00100000000010000000
.................................................................................................................................................TACATTGCAAGAA-CC---AT-TT-----------TCGTC.........................................................................................................................................................................2411.00100000001000000000
.........................................AGGTCAGTGCCGTTTGTCAAGGAGA................................................................................................................................................................................................................................................................................................2511.00100000000010000000
...........................................................................TGTCAACGTTGAACGCAAAAATGTAG.............................................................................................................................................................................................................................................................2611.00100000000010000000
.................................................................................................................TCGAACACATCGGCGATAGGGACG.........................................................................................................................................................................................................................2411.00100000000010000000
.....................................AATGAGGTCAGTGCCGTTTGTCAA.....................................................................................................................................................................................................................................................................................................2411.00100000010000000000
.................................................................ATTATAAGGTTGTCAACGTTGAACGCA......................................................................................................................................................................................................................................................................2711.00100000001000000000
...................................................................................TTGAACGCAAAAATGTAGCCC..........................................................................................................................................................................................................................................................2111.00100010000000000000
..................................................................................................................................................ACATTGCAAGAA-CC---AT-TT-----------TCGTCGTT......................................................................................................................................................................2611.00100000000000001000
.................................................................................................................TCGAACACATCGGCGATAGGGACGGTCTC....................................................................................................................................................................................................................2911.00100000000000001000
....................................................................................................................AACACATCGGCGATAGGGACGGTCTCTCG.................................................................................................................................................................................................................2911.00100000001000000000
.............................................................................................................TGCCTCGAACACATCGGCGATAGGGACG.........................................................................................................................................................................................................................2811.00100000000000010000
....................................................................................TGAACGCAAAAATGTAGCCCGCTA......................................................................................................................................................................................................................................................2411.00100000001000000000
...........................................................................TGTCAACGTTGAACGCAAAA...................................................................................................................................................................................................................................................................2011.00100000010000000000
.................ATTATAACTGACCCATTAACAATGAG.......................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
..............................................................................................................................................TCGTACATTGCAAGAA-CC---AT-TT-----------TCGTCG........................................................................................................................................................................2811.00100000001000000000
.................................................................................................................TCGAACACATCGGCGATAGGGA...........................................................................................................................................................................................................................2211.00100000001000000000
...................................................CGTTTGTCAAGGAGATTATA...........................................................................................................................................................................................................................................................................................2011.00100000010000000000
..................................................................................................................................AGGGACGGTCTCTCGTACATTGCAAGA.....................................................................................................................................................................................................2711.00100000000010000000
.....................................................................................................CCCGCTTCTGCCTCGAACACATCGGCGA.................................................................................................................................................................................................................................2811.00100000000010000000
.......................................TGAGGTCAGTGCCGTTTGTCAAGGAG.................................................................................................................................................................................................................................................................................................2611.00100000000100000000
...................................................................................................................GAACACATCGGCGATAGGGACGG........................................................................................................................................................................................................................2311.00100000000000010000
................................................TGCCGTTTGTCAAGGAGATTATAAGGTA......................................................................................................................................................................................................................................................................................2811.00100000000010000000
...................................................................................................................................................CATTGCAAGAA-CC---AT-TT-----------TCGTC.........................................................................................................................................................................2211.00100000010000000000
...............................................................................................................................................................CC---AT-TT-----------TCGTCGTTTAGAAGG----------------------------------------------------------------------------------------------------------------------------------------------------------TGT..2411.00100000000000010000
......................................................................................................................................................TGCAAGAA-CC---AT-TT-----------TCGTCGTTTAG...................................................................................................................................................................2511.00100000000100000000
.............................................................GGAGATTATAAGGTTGTCAACGTT.............................................................................................................................................................................................................................................................................2411.00100000000000010000
...............................................................AGATTATAAGGTTGTCAACGTTGAACGC.......................................................................................................................................................................................................................................................................2811.00100000001000000000
.............................................................................................................TGCCTCGAACACATCGGCGATAGGGACGGT.......................................................................................................................................................................................................................3011.00100000001000000000
....................................................................ATAAGGTTGTCAACGTTGAACGCAAAAA..................................................................................................................................................................................................................................................................2811.00100000001000000000
......................................................................................................................................................TGCAAGAA-CC---AT-TT-----------TCGTCGTTT.....................................................................................................................................................................2311.00100000001000000000
.................................................................................................................TCGAACACATCGGCGATAGGGACGGTCT.....................................................................................................................................................................................................................2811.00100000000000010000
............................................................................................................................................TCTCGTACATTGCAAGAA-CC---AT-...........................................................................................................................................................................................2211.00100000000000001000
droSec2
TA-------------------------------------------------------------------------------------------------------------------------------------------------CATCGCAGGAA-CT---GT-TT-----------TCTCCGTTCAAAAGGTGTTCCAGGCATGTGTTGTTCTGTGG--TGTATC-AACATAGAAGT---TCTCGTCGCACAAGAATGTATCATCCAGTT-TGGGGCATTTACGGGTCATATGA--ATTTTCTTATTATTAATATTATAAGCTAGGTAATTCGGGGTTATTACAAAATATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................................................................................................................................T---GT-TT-----------TCTCCGTTCAAAAGGTGTT...........................................................................................................................................................2474.7133131190
................................................................................................................................................................T---GT-TT-----------TCTCCGTTCAAAAGGTGTTCC.........................................................................................................................................................2673.142216060
................................................................................................................................................................T---GT-TT-----------TCTCCGTTCAAAAGGTGTTC..........................................................................................................................................................2573.002116050
..............................................................................................................................................................................................................TGTGTTGTTCTGTGG--TGTATC-AACA........................................................................................................................2512.0021010
..............................................................................................................................................................................................................TGTGTTGTTCTGTGG--TGTATC-AACATA......................................................................................................................2712.0022000
................................................................................................................................................................T---GT-TT-----------TCTCCGTTCAAAAGGTGT............................................................................................................................................................2371.861330100
................................................................................................................................................................T---GT-TT-----------TCTCCGTTCAAAAGGTGTTCCA........................................................................................................................................................2771.2997011
....................................................................................................................................................................................................................................................................TGTATCATCCAGTT-TGGGGCATT......................................................................2311.0011000
..........................................................................................................................................................................................................................................TAGAAGT---TCTCGTCGCACAAGAA..............................................................................................2311.0010010
.........................................................................................................................................................................................................................GTGG--TGTATC-AACATAGAAGT---TCTCGT........................................................................................................2711.0010010
....................................................................................................................................................................................................................................................................TGTATCATCCAGTT-TGGGGCATTTAC...................................................................2611.0011000
....................................................................................................................................................................................................................................................................TGTATCATCCAGTT-TGGGGCAT.......................................................................2211.0010010
..............................................................................................................................................................................................................TGTGTTGTTCTGTGG--TGTATC-AAC.........................................................................................................................2460.8355000
....................................................................................................................................................................GT-TT-----------TCTCCGTTCAAAAGGTGTT...........................................................................................................................................................2370.5744000
................................................................................................................................................................T---GT-TT-----------TCTCCGTTCAAAAGGTGTTCCAG.......................................................................................................................................................2870.4333000
...................................................................................................................................................................................................TGTTCCAGGCATGTGTTGTTCTGTGG--...................................................................................................................................2650.4022000
................................................................................................................................................................................................................................................................................TT-TGGGGCATTTACGGGTCATATGA--A.....................................................2630.3310001
......................................................................................................................................................................................TCCGTTCAAAAGGTGTTCCAGGCATG..................................................................................................................................................2670.2921010
TA-------------------------------------------------------------------------------------------------------------------------------------------------CATCGCAGGAA-CT---GT-TT-----------TCTCCGTT......................................................................................................................................................................2740.2511000
........................................................................................................................................................................T-----------TCTCCGTTCAAAAGGTGTTCCAGGCA....................................................................................................................................................2780.2521010
......................................................................................................................................................................................................TCCAGGCATGTGTTGTTCTGTGG--TGTA...............................................................................................................................2750.2010010
....................................................................................................................................................................................................GTTCCAGGCATGTGTTGTTCTGTGG--...................................................................................................................................2550.2011000
...................................................................................................................................................................................................TGTTCCAGGCATGTGTTGTTCTGTG......................................................................................................................................2550.2010010
.......................................................................................................................................................................................................CCAGGCATGTGTTGTTCTGTGG--TGTA...............................................................................................................................2650.2010010
.........................................................................................................................................................................................................AGGCATGTGTTGTTCTGTGG--TGT................................................................................................................................2360.1710010
..............................................................................................................................................................................................................TGTGTTGTTCTGTGG--TGTA...............................................................................................................................1960.1710010
..............................................................................................................................................................................................................TGTGTTGTTCTGTGG--TGTATC-AA..........................................................................................................................2360.1711000
..........................................................................................................................................................................................................GGCATGTGTTGTTCTGTGG--TGTATC-A...........................................................................................................................2660.1711000
................................................................................................................................................................................................AGGTGTTCCAGGCATGTGTTGTTCTG........................................................................................................................................2660.1711000
..............................................................................................................................................................................................................TGTGTTGTTCTGTGG--TGTATC-A...........................................................................................................................2260.1710010
..........................................................................................................................................................................................................GGCATGTGTTGTTCTGTGG--TGTATC-AA..........................................................................................................................2760.1711000
..........................................................................................................................................................................................................GGCATGTGTTGTTCTGTGG--TGTATC-............................................................................................................................2560.1711000
..........................................................................................................................................................................................................GGCATGTGTTGTTCTGTGG--TGTATC-C...........................................................................................................................2660.1711000
...............................................................................................................................................................CT---GT-TT-----------TCTCCGTTCAAAAGGTGTTC..........................................................................................................................................................2670.1411000
....................................................................................................................................................................GT-TT-----------TCTCCGTTCAAAAGGTGTTC..........................................................................................................................................................2470.1411000
................................................................................................................................................................T---GT-TT-----------TCTCCGTTCAAAAGGTGTTCCT........................................................................................................................................................2770.1411000
...........................................................................................................................................................................................TCAAAAGGTGTTCCAGGCATGTGTTGT............................................................................................................................................2770.1410010
....................................................................................................................................................................GT-TT-----------TCTCCGTTCAAAAGGTGTTCC.........................................................................................................................................................2570.1411000
...........................................................................................................................................................................................TCAAAAGGTGTTCCAGGCATG..................................................................................................................................................2170.1410010
...................................................................................................................................................................................................TGTTCCAGGCATGTGTTGTTC..........................................................................................................................................2170.1410001
...........................................................................................................................................................................................TCAAAAGGTGTTCCAGGCATGTGT...............................................................................................................................................2470.1410001
................................................................................................................................................................T---GT-TT-----------TCTCCGTTCAAAAGGT..............................................................................................................................................................2170.1410010
...................................................................................................................................................................................................TGTTCCAGGCATGTGTTGT............................................................................................................................................1970.1410001
....................................................................................................................................................................GT-TT-----------TCTCCGTTCAAAAGGTGT............................................................................................................................................................2270.1411000
.....................................................................................................................................................................................................TTCCAGGCATGTGTTGTTC..........................................................................................................................................1980.1310001
.....................................................................................................................................................................................CTCCGTTCAAAAGGTGTTCCAGGCA....................................................................................................................................................2580.1311000
.......................................................................................................................................................................TT-----------TCTCCGTTCAAAAGGTGTTCCAGGC.....................................................................................................................................................2780.1311000
.......................................................................................................................................................................TT-----------TCTCCGTTCAAAAGGTGTTCCAGG......................................................................................................................................................2680.1311000
........................................................................................................................................................................T-----------TCTCCGTTCAAAAGGTGTTCCAGG......................................................................................................................................................2580.1311000
..........................................................................................................................................................................................................................................................................ATCCAGTT-TGGGGCATTTACGGGTCA.............................................................26130.0810010
..........................................................................................................................................................................................................................................................................ATCCAGTT-TGGGGCATTTACGGG................................................................23140.0710010
dm3
CA-------------------------------------------------------------------------------------------------------------------------------------------------CATTACAGGAA-CT---AT--------------TCTCCGTTCAAAAGGTGTGCCAGGCATGTATTTTTGTGTGG--TGTGTC-GTTATAAAATT---CCTCGTCGCACAAGAATGTTTCGTCCAGTT-TGGGACATTTACGGGTAATATGG--TATTTCTTATTATTAATATTATAAGCTAGATAGTTTGGGGTTATTACAAAATATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................................................................................................................................................................................................................GTCGCACAAGAATGTTTCGTC.....................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................AATT---CCTCGTCGCACAAGAATGTTTCG.......................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TATTATAAGCTAGATAGTTTGGGGT.............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
................................................................................................................................................................................................................................................................................TT-TGGGACATTTACGGGTAATATGG--......................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................................................................................................................................................................TTTTGTGTGG--TGTGTC-GTTATAAAAT..................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................TCGTCGCACAAGAATGTTTCGTCCAGTT-...............................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................T---AT--------------TCTCCGTTCAAAAGGTGTGCCAGGC.....................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................TAAGCTAGATAGTTTGGGGTT............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................TTTTGTGTGG--TGTGTC-GTTATAAAATT---..............................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................AATT---CCTCGTCGCACAAGAAT.............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
..........................................................................................................................................................................................................................................................................................TTTACGGGTAATATGG--TATTTCTTATTAT.........................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TACGGGTAATATGG--TATTTCTTATTA..........................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................TCCGTTCAAAAGGTGTGCCAGGCATG..................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TTGTGTGG--TGTGTC-GTTATAAA....................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................TCGTCCAGTT-TGGGACATTTACGG.................................................................2411.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................CGTCCAGTT-TGGGACATTTACGGG................................................................2411.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................TAATATTATAAGCTAGATAGTTT..................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TAGATAGTTTGGGGTTATTAC.......2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................TAAGCTAGATAGTTTGGGGTTATTAC.......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TGGGACATTTACGGGTAATATGG--TAT...................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................TCCAGTT-TGGGACATTTACGGGTAA.............................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.......................................................................................................................................................................................................................GTGTGG--TGTGTC-GTTATAAA....................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................T---CCTCGTCGCACAAGAATGT...........................................................................................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................ATTTTTGTGTGG--TGTGTG-............................................................................................................................1850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TTATTATTAATATTATAAGC............................20200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TATTATTAATATTATAAGCTA..........................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................ATTATTAATATTATAAGCTAG.........................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................ATTTCTTATTATTAATATTAT................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TATTAATATTATAAGCTAG.........................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................TTTGGGGTTATTACAAAAT..19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..............................................................................................................................................................................................................................................................................................................................................TTGGGGTTATTACAAAAT..18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................CTTATTATTAATATTATAAGC............................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................TTTCTTATTATTAATATTATA...............................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................CTCCGTTCAAAAGGTGT............................................................................................................................................................17200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CA-------------------------------------------------------------------------------------------------------------------------------------------------CATTACAGGAA-CT---GT-TT-----------TCGCCGTTTAAAAGATTTGTCAGGCATGTATTATTTTGCGG--TGTGTC-GATAAAAAAGT---CTTCGTCGCACAAGAATGTGTCATCCAGCT-TAAGGCATTTCCGTGTCATATGA--TATTTCTTATTATTAGTGTTATAAGCTAAGTAGTTTGGGGTAATTATAAAATAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
CA-------------------------------------------------------------------------------------------------------------------------------------------------CATTGCAGGAA-CT---GT-TT-----------TCGCCGTTTAAAAGATTTGTCAGGCATGTATTATTTTGCGG--TGTGTC-GATAACAAAGT---CTTCGTCGCACAGGAATGTGCCATCCAGCT-TAGGGTATTTCCGTGTCATATGA--TATTTCTTATTATTAGTGTTATAGGCTAGGTAGTTTGGGGTAATTATAAAATAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
CA-------------------------------------------------------------------------------------------------------------------------------------------------CATCGCATTTT-GTTTCCT-TT-----------GCGTTCTTGACGATGTCCGACAGGCATCTGTTGTTTTTGGT--CACCAT-ATCCATATGCG---TTTTTTCGCAGAAAAACTCCCGCTCCACTT-TAAGACAGCTTTCATGAAATTGGTGAAA-----GGTGTTGTTGGCATGTGCCAGGAATTCCGGGGAAATGATGAAGTGTSizeHit CountTotal NormTotal
No Reads
droBia1
TA-------------------------------------------------------------------------------------------------------------------------------------------------TTATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCTAGGTAAGTCAACATACATASizeHit CountTotal NormTotal
No Reads
droTak1
CA-------------------------------------------------------------------------------------------------------------------------------------------------CATCGCATTTT-GTTTCCT-TT-----------GCGTTCTTGACGATGTCCGACAGGCATCTGTTGTTTTTGGC--CACCAT-ATCCATATGCG---TTTTTTCGCAGAAAAACTCCCGCTCCACTT-TAAGACAGCTTTCGTGAAATTGGTGAAA-----GGTGTTGTTGGCATGTGCCAGGAATTCCGGGGAAATGATGAAGTGTSizeHit CountTotal NormTotal
No Reads
droEle1
TC-------------------------------------------------------------------------------------------------------------------------------------------------CCTCTAAATTT-ACTGAAT-CGCATATTGGTGGTTGTTCGTTAAAATCTTCCTCAAGCACTCCTTCCTTTT------GTCTC-AACACCCAACTCTTCGCTCTCACAAATAAAAGTTTCATGAACTT-TTGAACATTGGTTGTTAAAGAAACTTAT-----TTTATACTTATTAATTGCTACATAATTTGGTATTATTAATAAATGASizeHit CountTotal NormTotal
No Reads
droRho1
CA-------------------------------------------------------------------------------------------------------------------------------------------------TGTCACATTTTTGTCTCTT-TT-----------TCGTTTTTGATAATGTCTGACAGGCATTTGTTGTTTTTTGT--TGTCGA-TTCCGTGTGGA---TTCCCTGGCAGAAGAACTCTTGTTCCACCT-TAAGACAGCTTT-GCGAAATTGATGTAT-----AGTGTTGTTATCATGTGCCAAGAATTCGGGGGAAATTATAAAATGTSizeHit CountTotal NormTotal
No Reads
droFic1
CA-------------------------------------------------------------------------------------------------------------------------------------------------TGTCACATTTT-GTCTCTT-TT-----------ACGTTATTGACGATGTCTGCCAGGCACTTGTTGTTTTTCAT--CGTCGG-GTCAGCGTGGA---TTCCCTGACAGAAGAACTCGTGTTCTACTTTTAAGGCAGCTTTCGCGAAATTGATGTAA-----AGTGTTGTTATTATGTGCCAAGAATTCGGGGGAAATGATGAAACGCSizeHit CountTotal NormTotal
No Reads
droKik1
TA-------------------------------------------------------------------------------------------------------------------------------------------------CGTCACATGTT-TCCGGAC-TT-----------ATTTTATTCAGTAGGTTGTTTAGGCATTTTTGTGTTACTGAATGTAGGATTGTATCTTTCG---GTTTTTTACAGAACATTGTTTTGTTAATCA-TTATGCATTTGGAGTTAAATTCTTTTGT-----AGACTCTTTATTATGAGCCACGAAATTTGGTGCTTTTACGAATTTASizeHit CountTotal NormTotal
No Reads
droBip1
AG-------------------------------------------------------------------------------------------------------------------------------------------------TGGCGCAAAAG-CGGGGTA-CC-----------TCCTTATTCTAGAGGTGATTCAGGCAGTCTGATGTCGCTGAGCCAACGTACCCTCCTCGTG---CTTTTTTGCAGTATAGGTTTCTGTCTATCT-CCGGGCATCTTTTGTCAAATTCTAAGGT-----TACATTTTTGCGGTGTGCCACGAATTTGGGTGTGCTCACGAACCGGSizeHit CountTotal NormTotal
No Reads
dp5
TGA------------------------------------------------------------------------------------------------------------------------------------------------TATTGCAAGTC-GC---TT-TG-----------TTATTGTTGAGTAGGTTGATTAGACAGTCTGGATTTGTCGG--T----------GCTGTCG---GGGTTTCACATACATGCAATTTGCCCAGTT-TGATACAAGGTGAATTTAAAATCTTAAT-----TTCTAGCTTATTTCTAATAATGTATTGTGGGAGAATTACAAATTTTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................TGGATTTGTCGG--T----------GCTGTCG---GGG...........................................................................................................23213.0026010000022120
.......................................................................................................................................................................TG-----------TTATTGTTGAGTAGGTTGATT.........................................................................................................................................................23111.00110300001430
...........................................................................................................................................................................................TGAGTAGGTTGATTAGACAGTCTGGAT............................................................................................................................................27110.00100300003040
....................................................................................................................................................................................................TGATTAGACAGTCTGGATTTGTCGG--...................................................................................................................................2519.0090100000530
...............................................................................................................................................................................................................TCTGGATTTGTCGG--T----------GCTGTCG---GGG...........................................................................................................2528.001601400000110
.........................................................................................................................................................................................................................................................................TGCCCAGTT-TGATACAAGGTGAATT...............................................................2518.0080800000000
..................................................................................................................................................................................................................................................................TGCAATTTGCCCAGTT-TGATACAAGG.....................................................................2617.0070400000300
.................................................................................................................................................................................................................TGGATTTGTCGG--T----------GCTGTCG---GGGTT.........................................................................................................2526.501301000002100
.....................................................................................................................................................................T-TG-----------TTATTGTTGAGTAGGTTGATT.........................................................................................................................................................2416.0060100000410
......................................................................................................................................................TGCAAGTC-GC---TT-TG-----------TTATTGTTGAG...................................................................................................................................................................2526.00120100000470
................................................................................................................................................................................................................................................................................................................................TCTAATAATGTATTGTGGGAGAAT..........2426.00120400000170
.....................................................................................................................................................................................TATTGTTGAGTAGGTTGATTAGACAG...................................................................................................................................................2616.0060100001040
.....................................................................................................................................................................................TATTGTTGAGTAGGTTGATTAGACAGTC.................................................................................................................................................2816.0060400000020
.......................................................................................................................................................................TG-----------TTATTGTTGAGTAGGTTGA...........................................................................................................................................................2114.0040100000030
.......................................................................................................................................................................TG-----------TTATTGTTGAGTAGGTTGATTAG.......................................................................................................................................................2514.0040000000310
............................................................................................................................................................................................................................................................................................................................TATTTCTAATAATGTATTGTGGGA..............2424.0080100000430
.....................................................................................................................................................................................TATTGTTGAGTAGGTTGATTAGACA....................................................................................................................................................2514.0040400000000
.........................................................................................................................................................................................................................TCGG--T----------GCTGTCG---GGGTTTCACATACA................................................................................................2623.5070000000610
...................................................................................................................................................................................................................................................................................TGATACAAGGTGAATTTAAAATCT.......................................................2413.0030300000000
.......................................................................................................................................................................................TTGTTGAGTAGGTTGATTAGACAGTC.................................................................................................................................................2613.0030200000010
...................................................................................................................................................TATTGCAAGTC-GC---TT-TG-----------TTATTGT.......................................................................................................................................................................2423.0060300000120
.................................................................................................................................................................................................................TGGATTTGTCGG--T----------GCTGTCG---GG............................................................................................................2223.0060200000220
....................................................................................................................................................................TT-TG-----------TTATTGTTGAGTAGGTTGATT.........................................................................................................................................................2513.0030000000030
.................................................................................................................................................................................................................TGGATTTGTCGG--T----------GCTGTCG---G.............................................................................................................2123.0060200000310
....................................................................................................................................................................................................TGATTAGACAGTCTGGATTTGTCGG--A----------........................................................................................................................2613.0030000000300
.................................................................................................................................................................................................................TGGATTTGTCGG--T----------GCTGTCG---GGGT..........................................................................................................2422.5050400001000
............................................................................................................................................................................................................................................................................................................................TATTTCTAATAATGTATTGTGGGAGA............2622.5050000000500
..................................................................................................................................................................................................................................................................................................................................TAATAATGTATTGTGGGAGAA...........2122.5050100000040
.....................................................................................................................................................................................TATTGTTGAGTAGGTTGATTAGA......................................................................................................................................................2312.0020000001010
...........................................................................................................................................................................................................................................................................................................TAAT-----TTCTAGCTTATTTCTAATAA..........................2422.0040300000010
.................................................................................................................................................................................................GGTTGATTAGACAGTCTGGATTTG.........................................................................................................................................2412.0020000000020
............................................................................................................................................................................................GAGTAGGTTGATTAGACAGTCTGGA.............................................................................................................................................2512.0020200000000
............................................................................................................................................................................................................................................................................................................................TATTTCTAATAATGTATTGTGG................2222.0040000000040
...............................................................................................................................................................................................TAGGTTGATTAGACAGTCTGGATTTG.........................................................................................................................................2612.0020100000100
................................................................................................................................................................................................................................................................CATGCAATTTGCCCAGTT-TGATACAAGG.....................................................................2812.0020200000000
...............................................................................................................................................................................................TAGGTTGATTAGACAGTCTGGATT...........................................................................................................................................2412.0020200000000
.......................................................................................................................................................................TG-----------TTATTGTTGAGTAGGTTGATTAGA......................................................................................................................................................2612.0020000000200
......................................................................................................................................................................................................................TTGTCGG--T----------GCTGTCG---GGGTTTCACA....................................................................................................2522.0040300000100
....................................................................................................................................................................................TTATTGTTGAGTAGGTTGATTAGACAG...................................................................................................................................................2712.0020000000200
....................................................................................................................................................................TT-TG-----------TTATTGTTGAGTAGGTTGAT..........................................................................................................................................................2412.0020200000000
.........................................................................................................................................................................................GTTGAGTAGGTTGATTAG.......................................................................................................................................................1812.0020100000100
..................................................................................................................................................................................................................................................................................................................................TAATAATGTATTGTGGGAGAAT..........2222.0040100000120
............................................................................................................................................................................................GAGTAGGTTGATTAGACAGTCTGGAT............................................................................................................................................2612.0020000000200
...............................................................................................................................................................................................................................................................................................................................TTCTAATAATGTATTGTGGGAGT............2321.5030000000300
........................................................................................................................................................................................................TAGACAGTCTGGATTTGTCGG--T----------........................................................................................................................2221.5030000000030
................................................................................................................................................................................................................CTGGATTTGTCGG--T----------GCTGTCG---GGGT..........................................................................................................2521.5030200000100
........................................................................................................................................................................................................TAGACAGTCTGGATTTGTCGG--T----------GC......................................................................................................................2421.5030000000030
.....................................................................................................................................................................................................................................................................................................................................TAATGTATTGTGGGAGAATTACAAATT..2721.5030000002100
........................................................................................................................................................................................................................................................................................................................................TGTATTGTGGGAGAATTACAAATTT.2521.5030100002000
................................................................................................................................................................................................................................................................................................................................TCTAATAATGTATTGTGGGAGAA...........2321.5030100000110
..........................................................................................................................................................................................................................................................................................................TTAAT-----TTCTAGCTTATTTCTAATAA..........................2521.5030100000200
......................................................................................................................................................................................ATTGTTGAGTAGGTTGATTAGACAG...................................................................................................................................................2511.0010100000000
...................................................................................................................................................................................................................................................................................TGATACAAGGTGAATTTAAAATCTTAAT-----..............................................2811.0010000000010
.......................................................................................................................................................................TG-----------TTATTGTTGAGTAGGTTGATTA........................................................................................................................................................2411.0010000000010
............................................................................................................................................................TC-GC---TT-TG-----------TTATTGTTGAGTAGGT..............................................................................................................................................................2421.0020000000020
...........................................................................................................................................................................................................................................................................................................................TTATTTCTAATAATGTATTGTGG................2321.0020000000020
TGA------------------------------------------------------------------------------------------------------------------------------------------------TATTGCAAGTC-GC---TT-TG-----------TTATTGT.......................................................................................................................................................................2721.0020200000000
....................................................................................................................................................................................TTATTGTTGAGTAGGTTGATTAGACAGTC.................................................................................................................................................2911.0010001000000
.....................................................................................................................................................................................TATTGTTGAGTAGGTTGATTAGACAGT..................................................................................................................................................2711.0010000000010
.............................................................................................................................................................................................AGTAGGTTGATTAGACAGTCTGGATT...........................................................................................................................................2611.0010000001000
............................................................................................................................................................................................................................................................................................................................TATTTCTAATAATGTATTGTGGGAG.............2521.0020100000010
...............................................................................................................................................................................................................TCTGGATTTGTCGG--T----------GCTGTCG---G.............................................................................................................2321.0020100000010
................................................................................................................................................................................................................................................................CATGCAATTTGCCCAGTT-TGATACAA.......................................................................2611.0010000000010
.....................................................................................................................................................TTGCAAGTC-GC---TT-TG-----------TTATTGTTGAGT..................................................................................................................................................................2721.0020200000000
.....................................................................................................................................................................................................................................................................................................................................TAATGTATTGTGGGAGAATTACAAAT...2621.0020000001010
........................................................................................................................................................................................................................................................................TTGCCCAGTT-TGATACAAGGTGAATT...............................................................2611.0010100000000
.....................................................................................................................................................................................TATTGTTGAGTAGGTTGA...........................................................................................................................................................1811.0010000000100
.........................................................................................................................................................................................................................................................................TGCCCAGTT-TGATACAAGGTGAATTT..............................................................2611.0010100000000
................................................................................................................................................................................................................................................................................................................................TCTAATAATGTATTGTGGGAGA............2221.0020200000000
...................................................................................................................................................................................................................................................................................................TAAAATCTTAAT-----TTCTAGCTTATTTC................................2621.0020100000010
..............................................................................................................................................................................................................................................................TACATGCAATTTGCCCAGTT-TGATA..........................................................................2511.0010000000010
...................................................................................................................................................................................................................................................................GCAATTTGCCCAGTT-TGATACAAGGT....................................................................2611.0010100000000
...............................................................................................................................................................................................................................................................................................................................TTCTAATAATGTATTGTGGGAGAA...........2421.0020000001010
.................................................................................................................................................................................................................................................................ATGCAATTTGCCCAGTT-TGATACAAGGT....................................................................2811.0010100000000
..........................................................................................................................................................................................TTGAGTAGGTTGATTAGACAGT..................................................................................................................................................2211.0010000000010
.....................................................................................................................................................................................................................................................................................................................TCTAGCTTATTTCTAATAATGTATTG...................2621.0020100000010
.............................................................................................................................................................................................................................................................................CAGTT-TGATACAAGGTGAATTTAAAA..........................................................2611.0010000000010
...........................................................................................................................................................................................TGAGTAGGTTGATTAGACAGTCTGGATT...........................................................................................................................................2811.0010000000010
...............................................................................................................................................................................................................................................................................................................................TTCTAATAATGTATTGTGGGAGA............2321.0020000000200
.......................................................................................................................................................................................TTGTTGAGTAGGTTGATTAG.......................................................................................................................................................2011.0010000001000
....................................................................................................................................................................................................TGATTAGACAGTCTGGATTTGTCGG--T----------GC......................................................................................................................2811.0010100000000
.................................................................................................................................................................................................................TGGATTTGTCGG--T----------GCTGTCG---GGGTTT........................................................................................................2621.0020200000000
...............................................................................................................................................................................................................TCTGGATTTGTCGG--T----------GCTGTCG---GG............................................................................................................2421.0020100010000
........................................................................................................................................................................................TGTTGAGTAGGTTGATTAGACAG...................................................................................................................................................2311.0010100000000
.......................................................................................................................................................................................................................................................................................................................TAGCTTATTTCTAATAATGTATTGTGG................2721.0020000000020
.....................................................................................................................................................................................................................TTTGTCGG--T----------GCTGTCG---GGGTTTCACA....................................................................................................2621.0020000000020
.......................................................................................................................................................................................................TTAGACAGTCTGGATTTGTCGG--T----------G.......................................................................................................................2421.0020000000020
...........................................................................................................................................................................................TGAGTAGGTTGATTAGACAGTCTGGA.............................................................................................................................................2611.0010100000000
.....................................................................................................................................................................................TATTGTTGAGTAGGTTGATTAGAC.....................................................................................................................................................2411.0010000000010
...........................................................................................................................................................................................TGAGTAGGTTGATTAGACAGTCTG...............................................................................................................................................2411.0010000000100
...........................................................................................................................................................................................TGAGTAGGTTGATTAGACAGT..................................................................................................................................................2111.0010100000000
.......................................................................................................................................................................................................TTAGACAGTCTGGATTTGTCGG--T----------GCTG....................................................................................................................2721.0020000000200
..................................................................................................................................................................................................................................................................................................................................TAATAATGTATTGTGGGAGAATTACA......2621.0020000000200
........................................................................................................................................................................................................TAGACAGTCTGGATTTGTCGG--T----------GCT.....................................................................................................................2521.0020000000020
...................................................................................................................................................TATTGCAAGTC-GC---TT-TG-----------TTATTG........................................................................................................................................................................2321.0020000000200
...........................................................................................................................................................................................................................................................................CCCAGTT-TGATACAAGGTGAATTT..............................................................2411.0010100000000
.........................................................................................................................................................................................................................................................................TGCCCAGTT-TGATACAAGGTGAAT................................................................2411.0010100000000
.......................................................................................................................................................................................................................................................................TTTGCCCAGTT-TGATACAAGG.....................................................................2111.0010100000000
.......................................................................................................................................................................................TTGTTGAGTAGGTTGATTAGACAG...................................................................................................................................................2411.0010100000000
................................................................................................................................................................................................................CTGGATTTGTCGG--T----------GCTGTCG---GGG...........................................................................................................2421.0020100000010
..........................................................................................................................................................................................TTGAGTAGGTTGATTAGACAGTCTGG..............................................................................................................................................2611.0010000000010
............................................................................................................................................................................................................................................................................................................................TATTTCTAATAATGTATTGTGGGAGAAT..........2821.0020100000010
TGA------------------------------------------------------------------------------------------------------------------------------------------------TATTGCAAGTC-GC---TT-TG-----------..............................................................................................................................................................................2021.0020200000000
.......................................................................................................................................................................TG-----------TTATTGTTGAGTAGGTTGATTAGAC.....................................................................................................................................................2711.0010100000000
......................................................................................................................................................................................................................TTGTCGG--T----------GCTGTCG---GGGTTTCAATG...................................................................................................2630.6720000000200
.........................................................................................................................................................................................................................TCGG--T----------GCTGTCG---GGGTTTCACATAC.................................................................................................2520.5010000000010
.......................................................................................................................................................................................................TTAGACAGTCTGGATTTGTCGG--T----------GC......................................................................................................................2520.5010000000010
......................................................................................................................................................................................................................TTGTCGG--T----------GCTGTCG---GGGTTT........................................................................................................2120.5010100000000
................................................................................................................................................................................................................................................................................................................................TCTAATAATGTATTGTGGG...............1920.5010000000010
.........................................................................................................................................................................................................................................................TCACATACATGCAATTTGCCCAGTT-...............................................................................2520.5010100000000
............................................................................................................................................................................................................................................................................................................................TATTTCTAATAATGTATTGTGGG...............2320.5010000000100
..............................................................................................................................................................................................................GTCTGGATTTGTCGG--T----------GCTGTCG---GGG...........................................................................................................2620.5010100000000
.......................................................................................................................................................................................................................TGTCGG--T----------GCTGTCG---GGGTA.........................................................................................................1920.5010100000000
................................................................................................................................................................................................................CTGGATTTGTCGG--T----------GCTGTCG---G.............................................................................................................2220.5010100000000
..................................................................................................................................................................................................................................................................................................TTAAAATCTTAAT-----TTCTAGCTTAT...................................2420.5010100000000
..................................................................................................................................................................................................................................................................TGCAATTTGCCCAGTT-TGAA...........................................................................2020.5010100000000
.....................................................................................................................................................TTGCAAGTC-GC---TT-TG-----------TTATTGTTGAG...................................................................................................................................................................2620.5010000000010
..........................................................................................................................................................................................................GACAGTCTGGATTTGTCGG--T----------G.......................................................................................................................2120.5010100000000
................................................................................................................................................................................................................................................................................................................................TCTAATAATGTATTGTGGGAG.............2120.5010000001000
............................................................................................................................................................................................................................................................................................................AAT-----TTCTAGCTTATTTCTAATAATGTA......................2720.5010100000000
..............................................................................................................................................................................................................................................................................................................................TTTCTAATAATGTATTGTGGGAG.............2320.5010000000010
.................................................................................................................................................................................................................TGGATTTGTCGG--T----------GCTGTC..................................................................................................................1920.5010100000000
TGA------------------------------------------------------------------------------------------------------------------------------------------------TATTGCAAGTC-GC---TT-TG-----------T.............................................................................................................................................................................2120.5010100000000
..............................................................................................................................................................................................................................................TCG---GGGTTTCACATACATGCAATT.........................................................................................2420.5010100000000
...................................................................................................................................................................................................................................................................................................TAAAATCTTAAT-----TTCTAGCTTATT..................................2420.5010100000000
...................................................................................................................................................................................................................GATTTGTCGG--T----------GCTGTCG---GGG...........................................................................................................2120.5010100000000
.................................................................................................................................................................................................................TGGATTTGTCGG--T----------GCTGTCG---GA............................................................................................................2220.5010100000000
...............................................................................................................................................................................................................TCTGGATTTGTCGG--T----------GCTGTCG---..............................................................................................................2220.5010000000010
...........................................................................................................................................................................................................................................................................................................................TTATTTCTAATAATGTATTGTGGGAG.............2620.5010100000000
.....................................................................................................................................................................................................GATTAGACAGTCTGGATTTGTCGG--...................................................................................................................................2420.5010100000000
.............................................................................................................................................................................................................................................GTCG---GGGTTTCACATACATGCAATT.........................................................................................2520.5010100000000
........................................................................................................................................................CAAGTC-GC---TT-TG-----------TTATTGTTGAG...................................................................................................................................................................2320.5010000000010
.......................................................................................................................................................................................................................................................TTTCACATACATGCAATTTGCCCAGTT-...............................................................................2720.5010000000100
..................................................................................................................................................................................................................GGATTTGTCGG--T----------GCTGTCG---GT............................................................................................................2120.5010100000000
.............................................................................................................................................................C-GC---TT-TG-----------TTATTGTTGAGTA.................................................................................................................................................................2020.5010000000010
..................................................................................................................................................................................................................................................................................................TTAAAATCTTAAT-----TTCTAGCT......................................2120.5010100000000
....................................................................................................................................................................................................................................................................................................................TTCTAGCTTATTTCTAATAATGTAT.....................2520.5010100000000
.....................................................................................................................................................................................................................TTTGTCGG--T----------GCTGTCG---GGGTT.........................................................................................................2120.5010100000000
.............................................................................................................................................................................................................AGTCTGGATTTGTCGG--T----------GCTGTCG---G.............................................................................................................2520.5010000000010
...............................................................................................................................................................................................................................T----------GCTGTCG---GGGTTTCACATACA................................................................................................2220.5010000000010
.....................................................................................................................................................................................................................................................................................................................................TAATGTATTGTGGGAGAATTACAAA....2520.5010100000000
........................................................................................................................................................................................................................................................................................................................................TGTATTGTGGGAGAATTACAAATT..2420.5010000010000
.....................................................................................................................................................................................................GATTAGACAGTCTGGATTTGTCGG--A----------........................................................................................................................2520.5010000000010
......................................................................................................................................................................................................................TTGTCGG--T----------GCTGTCG---GGGTTTCACATA..................................................................................................2720.5010000010000
................................................................................................................................................................................................................................................................................................................................TCTAATAATGTATTGTGGGAGAATTA........2620.5010100000000
.................................................................................................................................................................................................................TGGATTTGTCGG--T----------GCTGTCG---GGGG..........................................................................................................2420.5010000000100
.....................................................................................................................................................................................................................................................................................................................................TAATGTATTGTGGGAGAATTACAAATTT.2820.5010000000010
........................................................................................................................................................................................................................................................TTCACATACATGCAATTTGCCCAGTT-...............................................................................2620.5010000000010
.....................................................................................................................................................................................................................TTTGTCGG--T----------GCTGTCG---GGGTTTCAC.....................................................................................................2520.5010100000000
...............................................................................................................................................................................................................................T----------GCTGTCG---GGGTTTCACATACATGCAAT..........................................................................................2820.5010100000000
...............................................................................................................................................................................................................................................................................................................................TTCTAATAATGTATTGTGGGAGAAT..........2520.5010100000000
................................................................................................................................................................................................................................................G---GGGTTTCACATACATGCAATTTGCC.....................................................................................2620.5010100000000
..................................................................................................................................................................................................................................................................................................TTAAAATCTTAAT-----TTCTAGCTTATT..................................2520.5010000000010
..........................................................................................................................................................................................................................................................................................................................CTTATTTCTAATAATGTATTGTGGGA..............2620.5010000000100
........................................................................................................................................................................................................................................................................................................TCTTAAT-----TTCTAGCTTATTTCTAATAATG........................2920.5010100000000
................................................................................................................................................................................................................................................................................................................................TCTAATAATGTATTGTGGGAGAATTAC.......2720.5010100000000
............................................................................................................................................................................................................................................................................................................AAT-----TTCTAGCTTATTTCTAATAA..........................2320.5010000000100
......................................................................................................................................................................................................ATTAGACAGTCTGGATTTGTCGG--...................................................................................................................................2320.5010000000100
.................................................................................................................................................................................................................................................................................................................................CTAATAATGTATTGTGGGAGAAT..........2320.5010100000000
.........................................................................................................................................................................................................................TCGG--T----------GCTGTCG---GGGTTT........................................................................................................1820.5010100000000
..................................................................................................................................................................................................................................................................................................................................TAATAATGTATTGTGGGAGAATT.........2320.5010000000010
...............................................................................................................................................................................................................................................................................................................................TTCTAATAATGTATTGTGGGAGAATA.........2620.5010100000000
.......................................................................................................................................................................................................................TGTCGG--T----------GCTGTCG---GGGTTTCACA....................................................................................................2420.5010100000000
TGA------------------------------------------------------------------------------------------------------------------------------------------------TATTGCAAGTC-GC---TT-TG-----------TTAT..........................................................................................................................................................................2420.5010100000000
.............................................................................................................................................................C-GC---TT-TG-----------TTATTGTTGAGTAGGT..............................................................................................................................................................2320.5010000000010
...............................................................................................................................................................................................................................................................................................................................TTCTAATAATGTATTGTGGGA..............2120.5010000000100
............................................................................................................................................................................................................................................TGTCG---GGGTTTCACATACATGCAA...........................................................................................2420.5010100000000
...................................................................................................................................................TATTGCAAGTC-GC---TT-TG-----------TT............................................................................................................................................................................1920.5010100000000
droPer2
AG-------------------------------------------------------------------------------------------------------------------------------------------------TGTTGCAGGTG-GC---AACCA-----------TGGTTATTGAAAATACCCTCTAGGCATTGTTGATTGATGTT--ATTTGG-TGGTGTCGTAT---TATCTTCGCAGATGTAATTATGGTGTATTT-TGGGGCATTTTATATCGAAGCTTTTTAT--GTGTCCGGAATGGTCGTGTATAATATACTTAGGTAAGATTAATAACATASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................TATTGAAAATACCCTCTAGGCATTGT................................................................................................................................................2655.40270270000
.................................................................................................................................................................................................TACCCTCTAGGCATTGTTGATTGATGT......................................................................................................................................2752.60130130000
........................................................................................................................................................................................................TAGGCATTGTTGATTGATGTT--ATTTGG-............................................................................................................................2752.20110110000
...................................................................................................................................................................................................CCCTCTAGGCATTGTTGATTGATGT......................................................................................................................................2551.608080000
.................................................................................................................................................................................................TACCCTCTAGGCATTGTTGATTGATG.......................................................................................................................................2651.407070000
...........................................................................................................................................................................................TGAAAATACCCTCTAGGCATTGTTGAT............................................................................................................................................2751.206060000
...................................................................................................................................................................................................CCCTCTAGGCATTGTTGATTGATGTT--AT.................................................................................................................................2850.804040000
............................................................................................................................................................................................................CATTGTTGATTGATGTT--ATTTGG-............................................................................................................................2350.603030000
.......................................................................................................................................................................................TTATTGAAAATACCCTCTAGGCATTGT................................................................................................................................................2750.603030000
............................................................................................................................................................................................GAAAATACCCTCTAGGCATTGTTGAT............................................................................................................................................2650.603030000
..................................................................................................................................................................................................................TGATTGATGTT--ATTTGG-TGGTGT......................................................................................................................2360.503011001
.....................................................................................................................................................................................................CTCTAGGCATTGTTGATTGATGTT--AT.................................................................................................................................2650.402020000
...........................................................................................................................................................................................TGAAAATACCCTCTAGGCATTGTTGATT...........................................................................................................................................2850.402020000
.....................................................................................................................................................................................................CTCTAGGCATTGTTGATTGATGT......................................................................................................................................2350.402020000
.......................................................................................................................................................................................TTATTGAAAATACCCTCTAGGCAT...................................................................................................................................................2450.402020000
.................................................................................................................................................................................................TACCCTCTAGGCATTGTTGATTGATGTT--...................................................................................................................................2850.402020000
..........................................................................................................................................................................................TTGAAAATACCCTCTAGGCATTGTTGA.............................................................................................................................................2750.402020000
...........................................................................................................................................................................................TGAAAATACCCTCTAGGCATTGTTGA.............................................................................................................................................2650.402020000
..................................................................................................................................................................................................................TGATTGATGTT--ATTTGG-TGGTGTCGTAT---..............................................................................................................2860.332010001
..................................................................................................................................................................................................................TGATTGATGTT--ATTTGG-TGGTG.......................................................................................................................2260.332020000
..................................................................................................................................................................................................................TGATTGATGTT--ATTTGG-TGGTGTCGT...................................................................................................................2660.332020000
..................................................................................................................................................................................................................TGATTGATGTT--ATTTGG-TGGTGTC.....................................................................................................................2460.332020000
..................................................................................................................................................................................................ACCCTCTAGGCATTGTTGATTGATG.......................................................................................................................................2550.201010000
..................................................................................................................................................................................................ACCCTCTAGGCATTGTTGATTGAT........................................................................................................................................2450.201010000
.......................................................................................................................................................................................................CTAGGCATTGTTGATTGATGTT--AT.................................................................................................................................2450.201010000
........................................................................................................................................................................................................TAGGCATTGTTGATTGATGTT--ATT................................................................................................................................2450.201010000
........................................................................................................................................................................................TATTGAAAATACCCTCTAGGCATTG.................................................................................................................................................2550.201010000
...........................................................................................................................................................................................................GCATTGTTGATTGATGTT--ATTTGG-TGG.........................................................................................................................2750.201010000
..........................................................................................................................................................................................TTGAAAATACCCTCTAGGCATTGTT...............................................................................................................................................2550.201010000
....................................................................................................................................................................................TGGTTATTGAAAATACCCTCTAGGCAT...................................................................................................................................................2750.201010000
......................................................................................................................................................................................................TCTAGGCATTGTTGATTGATGTT--A..................................................................................................................................2450.201010000
.................................................................................................................................................................................................TACCCTCTAGGCATTGTTGATTGA.........................................................................................................................................2450.201010000
............................................................................................................................................................................................................CATTGTTGATTGATGTT--ATTTGG-T...........................................................................................................................2450.201010000
..................................................................................................................................................................................................ACCCTCTAGGCATTGTTGATTGATGT......................................................................................................................................2650.201010000
..........................................................................................................................................................................................TTGAAAATACCCTCTAGGCATTGTTGATA...........................................................................................................................................2950.201010000
...............................................................................................................................................................................................................TGTTGATTGATGTT--ATTTGG-TGG.........................................................................................................................2350.201010000
...................................................................................................................................................................................................CCCTCTAGGCATTGTTGATTGATGTT--...................................................................................................................................2650.201010000
..........................................................................................................................................................................................TTGAAAATACCCTCTAGGCATTGT................................................................................................................................................2450.201010000
.............................................................................................................................................................................................AAAATACCCTCTAGGCATTGTTGAT............................................................................................................................................2550.201010000
............................................................................................................................................................................................GAAAATACCCTCTAGGCATTGTTGATT...........................................................................................................................................2750.201010000
.................................................................................................................................................................................................TACCCTCTAGGCATTGTTGATTG..........................................................................................................................................2350.201010000
....................................................................................................................................................................................................CCTCTAGGCATTGTTGATTGATGTT--A..................................................................................................................................2650.201010000
...............................................................................................................................................................................................................TGTTGATTGATGTT--ATTTGG-TGGTGTC.....................................................................................................................2750.201010000
..............................................................................................................................................................................................................TTGTTGATTGATGTT--ATTTGG-TGG.........................................................................................................................2450.201010000
.................................................................................................................................................................................................TACCCTCTAGGCATTGTTGATTGATA.......................................................................................................................................2650.201010000
.........................................................................................................................................................................................ATTGAAAATACCCTCTAGGCATTGT................................................................................................................................................2550.201010000
.....................................................................................................................................................................................................CTCTAGGCATTGTTGATTGATGTT--A..................................................................................................................................2550.201000001
..........................................................................................................................................................................................................GGCATTGTTGATTGATGTT--ATTTGG-............................................................................................................................2550.201010000
......................................................................................................................................................................................................................TGATGTT--ATTTGG-TGGTGTC.....................................................................................................................2060.171010000
.................................................................................................................................................................................................................TTGATTGATGTT--ATTTGG-TGGTGT......................................................................................................................2460.171010000
.....................................................................................................................................................................................................................TTGATGTT--ATTTGG-TGGTGTCG....................................................................................................................2260.171010000
....................................................................................................................................................................................................................................................TATCTTCGCAGATGTAATTATGGTG.....................................................................................2560.171010000
.......................................................................................................................................................................................................................GATGTT--ATTTGG-TGGTGTCG....................................................................................................................2060.171010000
.....................................................................................................................................................................................................................TTGATGTT--ATTTGG-TGGTGTC.....................................................................................................................2160.171010000
...........................................................................................................................................................................................................................................................................TGTATTT-TGGGGCATTTTATATCGAAGC..........................................................2860.171010000
.............................................................................................................................................................................................................................................................................TATTT-TGGGGCATTTTATATCGAAGCT.........................................................2760.171000001
.........................................................................................................................................................................................................................................................TCGCAGATGTAATTATGGTGTATTT-...............................................................................2560.171000001
..................................................................................................................................................................................................................TGATTGATGTT--ATTTGG-TGGT........................................................................................................................2160.171010000
.....................................................................................................................................................................................................................TTGATGTT--ATTTGG-TGGTGTCGT...................................................................................................................2360.171010000
..................................................................................................................................................................................................................TGATTGATGTT--ATTTGG-TGGTGTCG....................................................................................................................2560.171010000
.........................................................................................................................................................................................................................................................TCGCAGATGTAATTATGGTGTAT..................................................................................2360.171000001
................................................................................................................................................................................................................GTTGATTGATGTT--ATTTGG-TGGTG.......................................................................................................................2460.171010000
....................................................................................................................................................................................................................................................TATCTTCGCAGATGTAATTATGGTGTA...................................................................................2760.171010000
.....................................................................................................................................................................................................................TTGATGTT--ATTTGG-TGGTGTCGTAT---..............................................................................................................2560.171000001
...............................................................................................................................................................................................................................................................................................TATCGAAGCTTTTTAT--GTGTCCGG.........................................2470.141000001
..................................................................................................................................................................................................................TGATTGATGTT--ATTTGG-TGGTGTCA....................................................................................................................2570.141010000
...............................................................................................................................................................................................................................................................................................TATCGAAGCTTTTTAT--GTGTCCGGA........................................2570.141000001
...............................................................................................................................................................................................................................................................................................TATCGAAGCTTTTTAT--GTGTCCGGAA.......................................2670.141010000
...............................................................................................................................................................................................................................................................................................TATCGAAGCTTTTTAT--GTGTCCG..........................................2370.141010000
......................................................................................................................................................................................................................TGATGTT--ATTTGG-TGGTGTTT....................................................................................................................2180.131010000
.................................................................................................................................................................................................................................................................................................................GTGTCCGGAATGGTCGTGTATA...........................2280.131000001
.................................................................................................................................................................................................................................................................................................................GTGTCCGGAATGGTCGTGTC.............................2080.131000001
.................................................................................................................................................................................................................................................................................................TCGAAGCTTTTTAT--GTGTCCGGAC.......................................2480.131010000
...............................................................................................................................................................................................................................................................................................................................CGTGTATAATATACTTAGGTAAGAT..........2590.111010000
droWil2
TCGATG---------------------------------------------------------------------------------------------------------------------------------------------CGTTGCAAGTC-GC---CA-TA-----------CTGTTGTTAAGTAGGTTTGGTAGGCAGTGGGGATTTGTAGG------------TAAAGTTG---GGGTCTCACATACATATAATTTGCCCAATT-TAATACATGGTGAGTTTAATTCCTTAAT-----TGTTAGCTTATTTCGAATAATGTGTCTTGGTAGTGTTACAAATTTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................................................................................................................................................TGTTAAGTAGGTTTGGTAGGCAGTGG................................................................................................................................................26127.00270170100
...................................................................................................................................................................................................................................................................................TAATACATGGTGAGTTTAATTCCT.......................................................2428.0016050110
...........................................................................................................................................................................................TAAGTAGGTTTGGTAGGCAGTGGGG..............................................................................................................................................2517.00725000
........................................................................................................................................................................................TGTTAAGTAGGTTTGGTAGGCAGTGGG...............................................................................................................................................2716.00606000
........................................................................................................................................................................................TGTTAAGTAGGTTTGGTAGGCAG...................................................................................................................................................2315.00504010
......................................................................................................................................................TGCAAGTC-GC---CA-TA-----------CTGTTGTTAAG...................................................................................................................................................................2524.50904050
...........................................................................................................................................................................................TAAGTAGGTTTGGTAGGCAGTGGG...............................................................................................................................................2414.00401120
........................................................................................................................................................................................TGTTAAGTAGGTTTGGTAGGCAGTG.................................................................................................................................................2513.00302010
.......................................................................................................................................................................TA-----------CTGTTGTTAAGTAGGTTTGGTA........................................................................................................................................................2413.00302010
.......................................................................................................................................................................TA-----------CTGTTGTTAAGTAGGTTTGGTAGG......................................................................................................................................................2613.00303000
...................................................................................................................................................................................................................................................................................TAATACATGGTGAGTTTAATTCCTTAAT-----..............................................2822.50505000
...................................................................................................................................................................................................................................................................................TAATACATGGTGAGTTTAATTCCTTA.....................................................2622.50503020
.............................................................................................................................................................................................................................................................................................TGAGTTTAATTCCTTAAT-----TGTTAGCT......................................2622.00401030
.....................................................................................................................................................................................TGTTGTTAAGTAGGTTTGGTAGGC.....................................................................................................................................................2412.00200020
..........................................................................................................................................................................................TTAAGTAGGTTTGGTAGGCAGTGG................................................................................................................................................2412.00201010
.........................................................................................................................................................................................GTTAAGTAGGTTTGGTAGGCAGTGG................................................................................................................................................2512.00202000
.........................................................................................................................................................................................................................................TAAAGTTG---GGGTCTCACATACATA..............................................................................................2422.00403010
........................................................................................................................................................................................TGTTAAGTAGGTTTGGTAGG......................................................................................................................................................2012.00202000
........................................................................................................................................................................................TGTTAAGTAGGTTTGGTAGGCAGTGGT...............................................................................................................................................2712.00202000
............................................................................................................................................................................................AAGTAGGTTTGGTAGGCAGTGG................................................................................................................................................2212.00202000
.......................................................................................................................................................................TA-----------CTGTTGTTAAGTAGGTTTGGT.........................................................................................................................................................2312.00201010
........................................................................................................................................................................................TGTTAAGTAGGTTTGGTAGGCA....................................................................................................................................................2212.00202000
...........................................................................................................................................................................................TAAGTAGGTTTGGTAGGCAGTGG................................................................................................................................................2312.00200020
...................................................................................................................................................................................................................................................................................................TAATTCCTTAAT-----TGTTAGCTTATTTCGAA.............................2921.50303000
...................................................................................................................................................................................................................................................................................TAATACATGGTGAGTTTAATTCCTT......................................................2521.50301020
...............................................................................................................................................................................................TAGGTTTGGTAGGCAGTGG................................................................................................................................................1911.00101000
........................................................................................................................................................CAAGTC-GC---CA-TA-----------CTGTTGTTAAGTAGG...............................................................................................................................................................2711.00100010
.........................................................................................................................................................AAGTC-GC---CA-TA-----------CTGTTGTTAAGTAG................................................................................................................................................................2511.00100010
........................................................................................................................................................................................TGTTAAGTAGGTTTGGTAGGC.....................................................................................................................................................2111.00100010
......................................................................................................................................................TGCAAGTC-GC---CA-TA-----------CTGTTGTTAAGTA.................................................................................................................................................................2711.00101000
.......................................................................................................................................................................................................................................................................................................TCCTTAAT-----TGTTAGCTTATTTCGAA.............................2521.00202000
.....................................................................................................................................................................................TGTTGTTAAGTAGGTTTGGTAGGCAG...................................................................................................................................................2611.00101000
..........................................................................................................................................................................................TTAAGTAGGTTTGGTAGGCAGTGGG...............................................................................................................................................2511.00101000
........................................................................................................................................................................................................TAGGCAGTGGGGATTTGTAGG------------TAAAG....................................................................................................................2611.00101000
........................................................................................................................................................................A-----------CTGTTGTTAAGTAGGTTTGGTAG.......................................................................................................................................................2411.00101000
.................................................................................................................................................................................................................................................................................T-TAATACATGGTGAGTTTAATTCCT.......................................................2521.00201010
...............................................................................................................................................................................................................................................TG---GGGTCTCACATACATATAATTTGCC.....................................................................................2711.00101000
.........................................................................................................................................................................................GTTAAGTAGGTTTGGTAGGCAG...................................................................................................................................................2211.00101000
........................................................................................................................................................................................TGTTAAGTAGGTTTGGTAGGCAGTGGGG..............................................................................................................................................2811.00100100
.....................................................................................................................................................................................TGTTGTTAAGTAGGTTTGGTAGGCA....................................................................................................................................................2511.00101000
...............................................................................................................................................................................................TAGGTTTGGTAGGCAGTGGGGATTTG.........................................................................................................................................2611.00101000
............................................................................................................................................................................................................................................................................................................................TATTTCGAATAATGTGTCTTGGTAG.............2511.00100010
.......................................................................................................................................................................................TTGTTAAGTAGGTTTGGTAGGCAG...................................................................................................................................................2411.00101000
...........................................................................................................................................................................................TAAGTAGGTTTGGTAGGCAGTGGGGT.............................................................................................................................................2611.00101000
......................................................................................................................................................................................................................................................................................TACATGGTGAGTTTAATTCCTTAAT-----TGT...........................................2821.00200020
..................................................................................................................................................................................................................................................................TATAATTTGCCCAATT-TAATACATGG.....................................................................2611.00101000
.........................................................................................................................................................................................GTTAAGTAGGTTTGGTAGGCAGTG.................................................................................................................................................2411.00101000
.........................................................................................................................................................................................................................................TAAAGTTG---GGGTCTCACATACAT...............................................................................................2320.50100010
........................................................................................................................................................................................................................GTAGG------------TAAAGTTG---GGGTCTCACA....................................................................................................2320.50101000
.................................................................................................................................................................................................................................................................................T-TAATACATGGTGAGTTTAATTCC........................................................2420.50100010
......................................................................................................................................................TGCAAGTC-GC---CA-TA-----------CTGTTGTTAAGT..................................................................................................................................................................2620.50100010
...............................................................................................................................................................................................................TGGGGATTTGTAGG------------TAAAGTTG---GGGTC.........................................................................................................2720.50101000
....................................................................................................................................................GTTGCAAGTC-GC---CA-TA-----------CTGTTGT.......................................................................................................................................................................2320.50101000
...................................................................................................................................................................................................................................................................................................TAATTCCTTAAT-----TGTTAGCTTATTTCGA..............................2820.50101000
...............................................................................................................................................................................................................TGGGGATTTGTAGG------------TAAAGTTG---GGG...........................................................................................................2520.50100010
...................................................................................................................................................................................................................................................................................TAATACATGGTGAGTTTAATTCC........................................................2320.50100010
.......................................................................................................................................................................................................................TGTAGG------------TAAAGTTG---GGGTCTCACA....................................................................................................2420.50101000
........................................................................................................................................................................................................................................................................................CATGGTGAGTTTAATTCCTTAAT-----TGTTA.........................................2820.50100010
......................................................................................................................................................................................................................................................................................TACATGGTGAGTTTAATTCCTTAAT-----..............................................2520.50101000
.........................................................................................................................................................................................................................................TAAAGTTG---GGGTCTCACATACATAT.............................................................................................2520.50100010
...........................................................................................................................................................................................................................................................................................................TAAT-----TGTTAGCTTATTTCGAA.............................2120.50101000
......................................................................................................................................................TGCAAGTC-GC---CA-TA-----------CTGTTG........................................................................................................................................................................2020.50101000
...............................................................................................................................................................................................................TGGGGATTTGTAGG------------TAAAGTTG---GG............................................................................................................2420.50100010
...................................................................................................................................................................................................................................................................................TAATACATGGTGAGTTTAATTCCTTAAA-----..............................................2820.50101000
....................................................................................................................................................................................................................................................................................AATACATGGTGAGTTTAATTCCTTA.....................................................2520.50101000
..................................................................................................................................................................................................................................................................................................TTAATTCCTTAAT-----TGTTAGCT......................................2120.50100010
droVir3
GA-------------------------------------------------------------------------------------------------------------------------------------------------TGTCGCTTGTT-GC---CG-TT-----------TGGTAAAAGAGAATGCTTTTAAGACGGTGGCTATTGACTAA--GTTCGT-TTGTGTAAATG---TGTTTTCGCATATAAATGTCTGATGTACTT-AGGGACATTTGTTTTCAAAGTACAAGATTTATC--CGTGTTGGTCGTATAAGATGTAGTTTGGTACTATCAGAAATTTASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................................................................................TTGTT-GC---CG-TT-----------TGGTAAAAGAGAATGC..............................................................................................................................................................2711.001000000100000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................TTTCGCATATAAATGTCTGATGTACTT-...............................................................................2711.001000000000000000000000000100000000000000000000000000000000000000
..........................................................................................................................................................................................AAGAGAATGCTTTTAAGACGGTG.................................................................................................................................................2311.001000000000000000000000000000000000000001000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TTGGTCGTATAAGATGTAGTTTGGTA..............2611.001000010000000000000000000000000000000000000000000000000000000000
droMoj3
AA-------------------------------------------------------------------------------------------------------------------------------------------------TGTCGCATGTT-GT---CG-TT-----------TCTTCGTTTAGAATGCCCTTTAGGCACTGTTGGTTGATTG--------C-TGGAGTAATGT---TGTCTTCGCAGATATATGACTGATGGACTT-TCGGACACTTGCTACTTATTTCTTTGAT--AATGCCAGCTTGGTTATGTATTACATATTTTGGTAAAATTAATATTTTGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................................................................................................................TGACTGATGGACTT-TCGGACACTTGC...................................................................2616.006600000
..................................................................................................................................................................................................................TGGTTGATTG--------C-TGGAGTAATGT---TGTCT.........................................................................................................2714.004200002
..................................................................................................................................................................................................................................................................TATGACTGATGGACTT-TCGGACACTTGC...................................................................2812.002200000
.................................................................................................................................................................................................................................................................................T-TCGGACACTTGCTACTTATTTCT........................................................2412.002200000
......................................................................................................................................................................................................................................................TCTTCGCAGATATATGACTGATGGAC..................................................................................2612.002200000
.............................................................................................................................................................T-GT---CG-TT-----------TCTTCGTTTAGAATGCCCTT..........................................................................................................................................................2712.002200000
.....................................................................................................................................................................................................................................................................GACTGATGGACTT-TCGGACACTTGC...................................................................2512.002200000
..................................................................................................................................................................................................................TGGTTGATTG--------C-TGGAGTAATGT---TGTC..........................................................................................................2612.002100001
............................................................................................................................................................................................TAGAATGCCCTTTAGGCACTGTTGGT............................................................................................................................................2621.002200000
........................................................................................................................................................................................................TAGGCACTGTTGGTTGATTG--------C-TGGAGTA.....................................................................................................................2811.001100000
............................................................................................................................................................................................................CACTGTTGGTTGATTG--------C-TGGA........................................................................................................................2111.001000001
..............................................................................................................................................................................................................................................TGT---TGTCTTCGCAGATATATGACTG........................................................................................2511.001100000
....................................................................................................................................................................................................................................................................TGACTGATGGACTT-TCGGACA........................................................................2111.001100000
..................................................................................................................................................................................................GCCCTTTAGGCACTGTTGGTTGATTG--------C-............................................................................................................................2711.001100000
.........................................................................................................................................................................................................................................................................................ACTTGCTACTTATTTCTTTGAT--AATGCC...........................................2811.001100000
...................................................................................................................................................................................................CCCTTTAGGCACTGTTGGTTGATTG--------C-............................................................................................................................2611.001100000
.................................................................................................................................................................................................................TTGGTTGATTG--------C-TGGAGTAATGT---TGTCT.........................................................................................................2811.001100000
....................................................................................................................................................................................................................................................................................CGGACACTTGCTACTTATTTCTTTGAT--AA...............................................2911.001100000
.....................................................................................................................................................................................................................TTGATTG--------C-TGGAGTAATGT---TGTCTTC.......................................................................................................2611.001100000
.................................................................................................................................................................................................TGCCCTTTAGGCACTGTTGGTTGATTG--------C-............................................................................................................................2811.001100000
..............................................................................................................................................................................................................................................TGT---TGTCTTCGCAGATATATGACTGA.......................................................................................2611.001100000
...............................................................................................................................................................................................................................................................................................TACTTATTTCTTTGAT--AATGCCAGCT.......................................2611.001100000
.......................................................................................................................................................................................................TTAGGCACTGTTGGTTGATTG--------C-TGG.........................................................................................................................2511.001100000
................................................................................................................................................................T---CG-TT-----------TCTTCGTTTAGAATGCCCT...........................................................................................................................................................2411.001100000
.....................................................................................................................................................................................................................TTGATTG--------C-TGGAGTAATGT---TGTCT.........................................................................................................2411.001100000
...............................................................................................................................................................................................................................................................ATATATGACTGATGGACTT-TCGGA..........................................................................2411.001100000
.......................................................................................................................................................................................................................GATTG--------C-TGGAGTAATGT---TGTCTTCGCA....................................................................................................2711.001100000
................................................................................................................................................................................................................................................................TATATGACTGATGGACTT-TCGGACACT......................................................................2711.001100000
..........................................................................................................................................................TGTT-GT---CG-TT-----------TCTTCGTTTAGAATGC..............................................................................................................................................................2611.001100000
................................................................................................................................................................................................................................................................................TT-TCGGACACTTGCTACTTATTTCT........................................................2511.001100000
....................................................................................................................................................................................TCTTCGTTTAGAATGCCCTTTAGGC.....................................................................................................................................................2511.001100000
..........................................................................................................................................................TGTT-GT---CG-TT-----------TCTTCGTTTAGAATGCCC............................................................................................................................................................2811.001100000
....................................................................................................................................................................................................................GTTGATTG--------C-TGGAGTAATGT---TGTCTT........................................................................................................2611.001000001
.......................................................................................................................................................................................................................................................CTTCGCAGATATATGACTGATGGACTT-...............................................................................2711.001100000
.............................................................................................................................................................T-GT---CG-TT-----------TCTTCGTTTAGAATGCCC............................................................................................................................................................2511.001100000
...................................................................................................................................................................................................................................................................................................................................TATTACATATTTTGGTAAAATTAATAT....2711.001100000
..............................................................................................................................................................................................................................................................................................................T--AATGCCAGCTTGGTTATGTATTAC.........................2511.001100000
.......................................................................................................................................................................................TCGTTTAGAATGCCCTTTAGGCACTGT................................................................................................................................................2721.002200000
...............................................................................................................................................................................................................TGTTGGTTGATTG--------C-TGGAGTAATGT---..............................................................................................................2511.001100000
.........................................................................................................................................................................................................................................................TCGCAGATATATGACTGATGGACTT-T..............................................................................2611.001100000
............................................................................................................................................................................................TAGAATGCCCTTTAGGCACTGTTGGTC...........................................................................................................................................2720.501100000
.................................................................................................................................................................................................TGCCCTTTAGGCACTGTTGGTTG..........................................................................................................................................2320.501100000
.......................................................................................................................................................................................TCGTTTAGAATGCCCTTTAGGCAC...................................................................................................................................................2420.501100000
.......................................................................................................................................................................................TCGTTTAGAATGCCCTTTAGGCACTGTGA..............................................................................................................................................2920.501100000

Generated: 05/15/2015 at 03:33 PM