ID:

dsi_21681

 Coordinate:

3l:20333997-20334267 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.2 -17.1 -17.1

Flybase annnotation

exon [3l_20334268_20334967_+]; CDS [3l_20334268_20334696_+]; exon [3l_20333694_20333996_+]; CDS [3l_20333694_20333996_+]; intron [3l_20333997_20334267_+]

No Repeatable elements found

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CAGCAGCCCTGTTCAGCGGAGTCGTCTACGCAGTCTACCTCTTCTGGAAGGTGAGATGCAGTGGGATCTCTATTTCGGGGTCTTTTTAAAAGATTTATTATATTTACTCCACCAACTCGAGTGCGAATTTAAACATCACCATCTTGTCTAAAGCTAAGATACATATATATTTTATGACACTTTTACGAGACGACGTTGGATTTACTTATTATTTAACACATTTTGTAAAAGTGTTAGGACCCATAAATAAGTTTTAAGTGGTCCACAAGTCAGTTCAAAGTTCATGATTGCTAATAACTTCTAAAACCTGTATAACTTCAGAAATACATTGCGCCTTACCTGTTCGGCAAGCCCAAGAAGAAGGCGGTCGA
************************************************************************....(((((.....(((........))).....))))).((((((((.(((.............)))..((((((..((((.(((((((......))))))).....)))).))))))))).)))))........******************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 SRR618934
dsim w501 ovaries
 SRR902009
testis
 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
..........................................................................................................................................................................................GAGACGACGTTGGATTTACTT.................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
........................................................................TTTCGGGGTCTTTTTAAAAGA...................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0
....AGCCCTGTTCAGCGGAGTCGTC......................................................................................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0 0
....AGCCCTGTTCAGCGGAGTC............................................................................................................................................................................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0
.........TGTTCAGCGGAGTCGTCTAC...................................................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
................CGGAGTCGTCTACGCAGTC................................................................................................................................................................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 1 0 0 0 0
...............................................AATGTGAGATGCAGTGG................................................................................................................................................................................................................................................................................................................... 17 1 5 0.60 3 0 3 0 0 0 0 0
..................................................GTGAGATGCAGTGTG.................................................................................................................................................................................................................................................................................................................. 15 1 10 0.20 2 0 2 0 0 0 0 0
...................................................................................................................................................................................................................................AAAGTGTTAGGACGCAAAGAT........................................................................................................................... 21 3 5 0.20 1 0 0 0 0 0 1 0
................................................AGGTGAGATGCAGTGT................................................................................................................................................................................................................................................................................................................... 16 1 6 0.17 1 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................GCTCGTTATTGCTAATAACT........................................................................ 20 3 8 0.13 1 0 1 0 0 0 0 0
......................................................................................................................................................................................................................................................................CCCCAAGTCACTTCTAAGT.......................................................................................... 19 3 11 0.09 1 0 0 0 0 0 0 1
...................................................................................................................................................................................TTTTTACGAGACGGCCTTG............................................................................................................................................................................. 19 3 13 0.08 1 0 0 1 0 0 0 0
......................................................................................................................GCGGGCGAATTGAAACATC.......................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 1

Anti-sense strand reads

GTCGTCGGGACAAGTCGCCTCAGCAGATGCGTCAGATGGAGAAGACCTTCCACTCTACGTCACCCTAGAGATAAAGCCCCAGAAAAATTTTCTAAATAATATAAATGAGGTGGTTGAGCTCACGCTTAAATTTGTAGTGGTAGAACAGATTTCGATTCTATGTATATATAAAATACTGTGAAAATGCTCTGCTGCAACCTAAATGAATAATAAATTGTGTAAAACATTTTCACAATCCTGGGTATTTATTCAAAATTCACCAGGTGTTCAGTCAAGTTTCAAGTACTAACGATTATTGAAGATTTTGGACATATTGAAGTCTTTATGTAACGCGGAATGGACAAGCCGTTCGGGTTCTTCTTCCGCCAGCT
********************************************************************************************************************************************************************....(((((.....(((........))).....))))).((((((((.(((.............)))..((((((..((((.(((((((......))))))).....)))).))))))))).)))))........************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 M024
male body		 M023
head
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 O001
Testis
 SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
..................................................................................................................................................................................................................................................................ACCAGGTGTTCAGTCAAGTTT............................................................................................ 21 0 1 2.00 2 0 0 2 0 0 0 0 0 0
................................................................................................................................................ACAGATTTCGATTCTATGTAT.............................................................................................................................................................................................................. 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................AAGATTCGCGAGGTGTTCAG.................................................................................................... 20 3 9 1.11 10 0 5 5 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................GTGTTCATTCCAGTTTCAAGT....................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................................................................GTGTTCATTCTAGTTTCAAG........................................................................................ 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0
....TCGGGACAAGTCGCCTCAGCA.......................................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................ATGTGTTCATTCCAGTTTCAAGT....................................................................................... 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................TGTGTTCATTCTAGTTTCAAGT....................................................................................... 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0
...........AAGTCGCCTCAGCAGATGCGT................................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................................................................................CCAGGTGTTCAGTCAAGTTTC........................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.............................................................................................................GTGGTTGAGCTCACGCTT.................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................................................................................................................................GTGTTCATTCTAGTTTCAAGTT...................................................................................... 22 3 2 1.00 2 1 0 0 0 0 0 0 0 1
.....................................................................................................................................................................................................................................................................AGGTGTTCAGTCAAGTTTCAA......................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0
...................TCAGCAGATGCGTCAGGTGGAGG......................................................................................................................................................................................................................................................................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................GCAACCTAAATGAATAATA............................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.................................................................................................................................................................................................................................................................................AGGTTTCTAGTACTAACGA............................................................................... 19 2 2 0.50 1 0 0 0 0 0 0 0 1 0
.....................................................................................................................................................................................................................................................................TCGAGTTCAGTCAAGTTTCAA......................................................................................... 21 3 2 0.50 1 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................................................................................TGTGTTCATTCCAGTTTCAAGT....................................................................................... 22 3 2 0.50 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................CGTGTTCAGTCCAGTTTCAAGTT...................................................................................... 23 3 2 0.50 1 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................................................................................TGTTCATTCCAGTTTCAAGT....................................................................................... 20 2 2 0.50 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................TTCGAGATTCACCAGGTGT........................................................................................................ 19 2 3 0.33 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................GTTCATTCCAGTTTCAAGT....................................................................................... 19 2 4 0.25 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................TGTTCATTCCAGTTTCAAG........................................................................................ 19 2 4 0.25 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................ATGTGTTCATTCTAGTTTCA.......................................................................................... 20 3 13 0.15 2 0 0 0 1 0 0 0 0 1
..............................................................................................................................................................................................................................................................................................TAACGATTATTGAAG...................................................................... 15 0 7 0.14 1 0 0 0 0 0 0 0 1 0
........................................................................................................................................................................................................................................................................TGTTCATTCTAGTTTCAAGTT...................................................................................... 21 3 7 0.14 1 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................................................................GTGTTCATTCTAGTTTCA.......................................................................................... 18 2 9 0.11 1 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................................................................................TGTGTTCATTCTAGTTTCAA......................................................................................... 20 3 14 0.07 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................GGAACGCGGAATGCAC............................. 16 2 19 0.05 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................AGTGGTAGAAGAGATTGCC......................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:20333947-20334317 + dsi_21681 CAGCAGCCCTGTTCAGCGGAGTCGTCTACGCAGTCTACCTCTTCTGGAAGGTGAGATGCAGTGG-GATCTCTATTTCGG--------GGTCTTTTTAAAAGAT-TTATT-ATATTTACTCCACCAACTCGAGTGCGAATTTAAACATCACCATCTTGTCTAAAGCTAAGATACAT-----ATATATTTTATGACACTTTTACGAG-----------------------------------------------------ACGACGTTGGATTT-ACTTA----TTATTTAA-------------------------------------------------CACATTTTGTAAAAGTGTTAGGACCCATAAATAAGTTTTAAGTGGTCCACAAG---------------------------------------------------TCA---------------------------------------GTTC--AAAGTTCATGATTGCTAATAACTTCTAAAACCTG-----------TATAACTTCAGAAATACATTGCGCCTTACCTGTTCGGCAAGCCCAAGAAGAAGGCGGTCGA
droSec2 scaffold_11:671608-671978 + CGGCAGCCCTGTTCAGCGGAGTCGTCTACGCAGTCTACCTCTTCTGGAAGGTGAGATGCAATGG-GATCTCTATTTCGG--------GGTCTTTTTAAAAGAT-TTATT-ATATTTACTCCACCAAGCCGAGTGCGAATTTAAAGATCACCATCTTGTCTAAAGCTAAGATACAT-----ATATATTTGATGACACTTTTACGAG-----------------------------------------------------ACGACGTTGGATTT-ACTTA----TTATTTAA-------------------------------------------------CACATTTTGTAAAAGTGTTAGGACCCATAAATAAGTTTTAAGTGGTCCACAAG---------------------------------------------------TCA---------------------------------------GTTC--AAAGTTCATGATTGCTAATAACTTCTAAAACCTG-----------TATAACTTCAGAAATACATTGCGCCTTACCTGTTCGGCAAGCCCAAGAAGAAGGCGGTCGA
dm3 chr3L:20772456-20772827 + CGGCAGCCCTGTTCAGCGGAGTCGTCTACGCAGTCTACATCTTCTGGAAGGTGAGATGCAGTGG-GATCTCTATTTCGG--------GGTCTTTTAAAAAGAT-TTATT-ATATTTACTCCACCAACTCGAGTGCGAATTTAAAGATCGCCATCTTGTCTAAGGCTTAGATACATTACACATATATTTGATGACACTTTTACCAG-----------------------------------------------------ACGACGTTGAATTT-ACTTA----GTATTTAA-------------------------------------------------CACATTTTGTAAAAGTGTTAGGACGCATAAATAAGTTTTAAGTGGTCCA-------------------------------------------------------CCA---------------------------------------GTCC--AAAGTCCATGATTGCTAATAACTTCTAAAACCCG-----------TATAATTTCAGCAATACATTGCGCCCTACCTGTTCGGCAAGTCCAAGAAGAAGGCGGTCGA
droEre2 scaffold_4784:20463347-20463659 + CGGCAGCCCTGTTCAGCGGAGTTATTTACGCAGTCTACCTGTTCTGGAAGGTGAGATACCGTGG-GATCCCTATTTCGG--------GGGATTATTA-AAGATTTTTTT-TTATAT--------AACTCGAGTGTGACCTTAAATAT------CTTG-CTAAAACTTATCTACATTAT--------------------------------------------------------------------------------------------AT-ACTCA----ACATT------------------------------------------------CTAACTCATTTATTAGAAGTGATAGTACGCATTAATAAGTTTTTTAAGGTCCA-------------------------------------------------------ACA---------------------------------------ATAC--ACAGATCATT------ATTAACTTCTAAAACCTG-----------TTTAACTTCAGAAATACATTGCGCCTTACCTGTTTGGCAAACCCAAAAAGAAGGCGGTCGA
droYak3 3L:19777218-19777469 - CGGCAGCCCTGTTTAGCGGCGTTGTTTATGCAGTCTACCTCTTCTGGAAGGTGAGATACCGTGATGATCCCTATTTTGG--------GGATTTTATTAA-------------------------------------------------------TTG-CTAAAGCTTAGCTGCAT-ATATACATATTTGATGAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------TG--------TCTA-----------AAAAGTTTGTTGA---------------------------------------------------TCA---------------------------------------GTTC--AAAGATCATTTTTGATATTAACTTTTAAAACCTG-----------TATATTTACAGAAATACATTGCGCCTTACCTGTTTGGCAAGCCAAAGAAGAAGGCAGTCGA
droEug1 scf7180000409711:5221227-5221568 - AATGAA--------------------------------------------------------------------------------------------------TTATTAACATCTACTCCATAAGGCGAAATGAGAGTTCAAAGATCAATATCTCATCTCCAGCTGGTGTACAT-----AAATCTTTAATGACATTTTAAAAATATCGCG------------------------------------------------CCGCGTTATATTT-ATTCAGTCAATA-TTAA-------------------------------------------------CAAGTTTTTTAAAAA------------------ATCGTAAAGTATTC----AGTCAGTTCAACGCATACTTGAAGCTGAAACTTTGTTTGTTTGGGGTTTGTTAACAGTCCTAAGATCATTTGGGTGTATCTATCTTATCACACA-A-------------T-------------TAAATAAATAAA----CCATCATTTCCTTTACAGAAGTACATCGCGCCATACCTCTTTGGCAAGCCCAAAAAGAAGCCGGTCGA
droBia1 scf7180000302193:5278381-5278455 - CGGCAGCCCTGTTCAGCGGAGTGGTGTACGCCGTCTATCTCTTCTGGAAGGTGAGCAAGCCGGG-GATCTCTATCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415420:134246-134340 + CGGCAGCCCTGTTCAGCGGAGTGGTGTACGCCGTCTACCTCTTCTGGAAGGTGAGTAGTTCGGG-GAT-------TCTCAATATTAGGGTACTAGTTATAGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491193:5152611-5152694 + TAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACGAAAACCAA----CACTATTTTTGCTTACAGAAATACATTGCACCCTATCTGTTTGGCAAGCCGAAGAAGAAGCCGGTCGA
droRho1 scf7180000768856:45817-46118 + TATTTGCTCTATAAACCT---------------------------------------------------------------------------------------------------------------TAGTGAGAGTCCAAAGATCAATTTC-----TCAAGCTAATGCTCGT-----AAATCTTTAA-------------ATGTCGCAAGGGGAATTATTTAAAATATTAATTAATTATATGAGCTC--ATAAAAATAAAATTGAATTTGACCTA----TTATTTAGCGGTTAGTTTGCTAAAAATGTTGTGCAATTAATAAAATTAAATCTCTAAAGCATTTATT------------------------------------------------------------------------------------------------------------------------TTGACT----TCATCAATAAATACAAATAATT------T-------------------------TGTTCTTTTTGCAGAAATACATTGCTCCCTACATTTTTGGCAAGCCCAAGAAGAAGCCGGTCGA
droFic1 scf7180000454065:1273342-1273431 + CGGCGGCCCTTTTCAGCGGGGTGGTCTATGCAGTCTATCTCTTCTGGAAGGTGAGTGATA-----GTTCTGTGTTTCTG--------AATATTTT-------T-TTATT-AT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302441:3503544-3503634 + TCCAAATT------AATAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTA-------AACTTTA----CCGTTTATTCAAATTTAGAAATACATTGCTCCCTACCTTTTTGGCAAGCCCAAAAAGAAGCCCGTCGA
droAna3 scaffold_13337:11126718-11127052 + CGGCCGCATTATTCAGTGGAGTGGTGTACGCCGTCTACCTCTTCTGGAAGGTGAGTGTT------------------------------------------------------------TCAGCAT--AACAGAAGAGTCCAAAGATCATT-TATCTTCTTAAATTGATGTGGCT-----GACTTGG-----------------------------AAATAT-GAAAACTTAAAACAACTGTTTACGCCCCGTGAAAGGTGGAATCATTTTTTACGTT-----------------------CTTGAAACGTCTTCCTAATGATCA----------------------------------------------------------------------------------------------CCTTTGTTTA-------------AATGATTTTTAGCGCTTTTG-----TTCTAAGTAATGAAATA-A-------------T-------------TG--AAGACCTGTGACTCACGACTTTATTTTCAGAAATACATTGCTCCCTACCTGTTTGGCAAGCCGAAGAAGAAGCCCGTGGA
droBip1 scf7180000396569:262912-262970 - TA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCAGAAATACATTGCTCCCTACCTATTTGGCAAGCCGAAGAAGAAGCCCGTGGA
dp5 XR_group8:8194437-8194494 + CGACGGCCCTGTTTAGTGGGGTCATCTATGCGGTGTACCTTTTCTGGAAGGTGAGTTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_40:385405-385462 + CGACGGCCCTGTTTAGTGGGGTCATCTATGCGGTGTACCTGTTCTGGAAGGTGAGTTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004837:1634788-1634839 + CGGCAGCCCTTTTTGGTGGTGTTATCTATGCCGTTTATTTATTTTGGAAGGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13049:18571844-18571895 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAATACATTGCACCGTTTCTGTTTGGCAAGCCCAAGAGAAAACCCGTTGA
droMoj3 scaffold_6680:12675396-12675463 + TGCTAAAAATTTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGAAATTCATTGCACCATTTCTATTTGGTAAGCCAAAGAAGAAACCAGTTGA
droGri2 scaffold_15110:19048333-19048385 - C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAGTACATTGCTCCATTTTTGTTTGGCAAGCCGAAGAGGAGACCAGTTGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CAGCAGCCCTGTTCAGCGGAGTCGTCTACGCAGTCTACCTCTTCTGGAAGGTGAGATGCAGTGG-GATCTCTATTTCGG--------GGTCTTTTTAAAAGAT-TTATT-ATATTTACTCCACCAACTCGAGTGCGAATTTAAACATCACCATCTTGTCTAAAGCTAAGATACAT-----ATATATTTTATGACACTTTTACGAG-----------------------------------------------------ACGACGTTGGATTT-ACTTA----TTATTTAA-------------------------------------------------CACATTTTGTAAAAGTGTTAGGACCCATAAATAAGTTTTAAGTGGTCCACAAG---------------------------------------------------TCA---------------------------------------GTTC--AAAGTTCATGATTGCTAATAACTTCTAAAACCTG-----------TATAACTTCAGAAATACATTGCGCCTTACCTGTTCGGCAAGCCCAAGAAGAAGGCGGTCGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................GAG-----------------------------------------------------ACGACGTTGGATTT-ACTT................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
.........................................................................TTTCGG--------GGTCTTTTTAAAAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
....AGCCCTGTTCAGCGGAGTCGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
....AGCCCTGTTCAGCGGAGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
.........TGTTCAGCGGAGTCGTCTAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
................CGGAGTCGTCTACGCAGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000001000
................................................AGGTGAGATGCAGTGT-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1660.17100000000001000000
droSec2
CGGCAGCCCTGTTCAGCGGAGTCGTCTACGCAGTCTACCTCTTCTGGAAGGTGAGATGCAATGG-GATCTCTATTTCGG--------GGTCTTTTTAAAAGAT-TTATT-ATATTTACTCCACCAAGCCGAGTGCGAATTTAAAGATCACCATCTTGTCTAAAGCTAAGATACAT-----ATATATTTGATGACACTTTTACGAG-----------------------------------------------------ACGACGTTGGATTT-ACTTA----TTATTTAA-------------------------------------------------CACATTTTGTAAAAGTGTTAGGACCCATAAATAAGTTTTAAGTGGTCCACAAG---------------------------------------------------TCA---------------------------------------GTTC--AAAGTTCATGATTGCTAATAACTTCTAAAACCTG-----------TATAACTTCAGAAATACATTGCGCCTTACCTGTTCGGCAAGCCCAAGAAGAAGGCGGTCGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................AGGTGAGATGCAATGG-GA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
dm3
CGGCAGCCCTGTTCAGCGGAGTCGTCTACGCAGTCTACATCTTCTGGAAGGTGAGATGCAGTGG-GATCTCTATTTCGG--------GGTCTTTTAAAAAGAT-TTATT-ATATTTACTCCACCAACTCGAGTGCGAATTTAAAGATCGCCATCTTGTCTAAGGCTTAGATACATTACACATATATTTGATGACACTTTTACCAG-----------------------------------------------------ACGACGTTGAATTT-ACTTA----GTATTTAA-------------------------------------------------CACATTTTGTAAAAGTGTTAGGACGCATAAATAAGTTTTAAGTGGTCCA-------------------------------------------------------CCA---------------------------------------GTCC--AAAGTCCATGATTGCTAATAACTTCTAAAACCCG-----------TATAATTTCAGCAATACATTGCGCCCTACCTGTTCGGCAAGTCCAAGAAGAAGGCGGTCGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........GTTCAGCGGAGTCGTCTACGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007
..GCAGCCCTGTTCAGCGGAGTCGTCTAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................AGTCTACATCTTCTGGAAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCTGTTCGGCAAGTCCAAGAAGAA.........2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000010
..................GAGTCGTCTACGCAGTCTACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AGCCCTGTTCAGCGGAGTCGTCTACGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCTGTTCGGCAAGTCCAAG..............2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000
..GCAGCCCTGTTCAGCGGAGTCGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCTGTTCGGCAAGTCCAA...............2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000
.........................................................................................................................................................................................TTTGATGACACTTTTACCAG-----------------------------------------------------A..................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCGCCCTACCTGTTCGGCA......................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
.........................................TTCTGGAAGGTGAGATGCAGTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCAAGTCCAAGAAGAAGGC......2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GGCAGCCCTGTTCAGCGGAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GTCGTCTACGCAGTCTACATCTTCTGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ACGCAGTCTACATCTTCTGGAAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GCCCTGTTCAGCGGAGTCGTCTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAAGAAGAAGGCGGTC..1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
............TCAGCGGAGTCGTCTACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
............................CGCAGTCTACATCTTCTGGAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CTACGCAGTCTACATCTTCTGGAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
................................GTCTACATCTTCTGGAAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCGCCCTACCTGTTCGGC.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CAGCCCTGTTCAGCGGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................AAGGTGAGATGCAGTGG-GATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCATGATTGCTAATAACTTC.................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG-----------TATAATTTCAGCAATACA...........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.GGCAGCCCTGTTCAGCGGAGTCGTCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................TTCTGGAAGGTGAGATGCAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................GTGAGATGCAGTGG-GATCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AGCGGAGTCGTCTACGCAGTCTACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CAGTCTACATCTTCTGGAAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCAAGTCCAAGAAGAAGGCGGTC..2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGGCAAGTCCAAGAAGAAGGC......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCTGTTCGGCAAGTCCAAGA.............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ACGCAGTCTACATCTTCTGGAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTCGGCAAGTCCAAGAAGA..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACCTGTTCGGCAAGTCCAA...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....................................................................................................................................................................................................................................................................GACGTTGAATTT-ACTTA----GT.........................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAACTTCTAAAACCCG-----------TAT..........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................CATCTTCTGGAAGGTGAGATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GGAGTCGTCTACGCAGTCTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CAGTCTACATCTTCTGGAAGGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGCGCCCTACCTGTTCGGCAAG....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................AAGGTGAGATGCAGTGG-GATCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGCGCCCTACCTGTTCGGC.......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TACTCCACCAACTCGAGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GCCCTGTTCAGCGGAGTCGTCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GCCCTGTTCAGCGGAGTCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................TGGAAGGTGAGATGCAGTGT-A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
.....................................................................................................................................................................................................................................................................ACGTTGAATTT-ACTTA----GTATT......................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTGAGATGCAGTGG-GATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GTTCAGCGGAGTCGTCTACGCAGTCTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CAGCGGAGTCGTCTACGCAGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AGCCCTGTTCAGCGGAGTCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TCTACGCAGTCTACATCTTCTGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................AGGTGAGATGCAGTGG-GATCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................TTTACCAG-----------------------------------------------------ACGACGTTGAATTT-....................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................AAGTGTTAGGACGCATAAAT..................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................................AAGGTGAGATGCAGTGG-G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TTTTACCAG-----------------------------------------------------ACGACGTTGAAT.......................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GTTCAGCGGAGTCGTCTACGCAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCCCTACCTGTTCGGCA......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................TTCTGGAAGGTGAGATGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAAGTCCAAGAAGAAGGCGG....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTCGGCAAGTCCAAGAAG...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
...............GCGGAGTCGTCTACGCAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTCGGCAAGTCCAAGAAGAAGGC......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GGCAGCCCTGTTCAGCGGAGTCGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTACCTGTTCGGCAAGTCCAAGAAGA..........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................TTTAA-------------------------------------------------CACATTTTGTAAAAGT..................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....AGCCCTGTTCAGCGGAGTCGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...................................................................TCTCTATTTCGG--------GGTCTTTTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CCTGTTCAGCGGAGTCGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGTCCAAGAAGAAGGCGGTC..2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
CGGCAGCCCTGTTCAGCGGAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
droEre2
CGGCAGCCCTGTTCAGCGGAGTTATTTACGCAGTCTACCTGTTCTGGAAGGTGAGATACCGTGG-GATCCCTATTTCGG--------GGGATTATTA-AAGATTTTTTT-TTATAT--------AACTCGAGTGTGACCTTAAATAT------CTTG-CTAAAACTTATCTACATTAT--------------------------------------------------------------------------------------------AT-ACTCA----ACATT------------------------------------------------CTAACTCATTTATTAGAAGTGATAGTACGCATTAATAAGTTTTTTAAGGTCCA-------------------------------------------------------ACA---------------------------------------ATAC--ACAGATCATT------ATTAACTTCTAAAACCTG-----------TTTAACTTCAGAAATACATTGCGCCTTACCTGTTTGGCAAACCCAAAAAGAAGGCGGTCGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACATTGCGCCTTACCTGT............................2111.0010000100
.............................GCAGTCTACCTGTTCTGGAAGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAACCCAAAAAGAAGGCGGTC..2311.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAAACCCAAAAAGAAGGC......2011.0010001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCAAACCCAAAAAGAAGGCGGTC..2611.0010000100
................................................................................................................ATAT--------AACTCGAGTGTGACCTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTGCGCCTTACCTGTTTG.........................2111.0010000100
droYak3
CGGCAGCCCTGTTTAGCGGCGTTGTTTATGCAGTCTACCTCTTCTGGAAGGTGAGATACCGTGATGATCCCTATTTTGG--------GGATTTTATTAA-------------------------------------------------------TTG-CTAAAGCTTAGCTGCAT-ATATACATATTTGATGAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------TG--------TCTA-----------AAAAGTTTGTTGA---------------------------------------------------TCA---------------------------------------GTTC--AAAGATCATTTTTGATATTAACTTTTAAAACCTG-----------TATATTTACAGAAATACATTGCGCCTTACCTGTTTGGCAAGCCAAAGAAGAAGGCAGTCGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............TTAGCGGCGTTGTTTATGCAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
droEug1
AATGAA--------------------------------------------------------------------------------------------------TTATTAACATCTACTCCATAAGGCGAAATGAGAGTTCAAAGATCAATATCTCATCTCCAGCTGGTGTACAT-----AAATCTTTAATGACATTTTAAAAATATCGCG------------------------------------------------CCGCGTTATATTT-ATTCAGTCAATA-TTAA-------------------------------------------------CAAGTTTTTTAAAAA------------------ATCGTAAAGTATTC----AGTCAGTTCAACGCATACTTGAAGCTGAAACTTTGTTTGTTTGGGGTTTGTTAACAGTCCTAAGATCATTTGGGTGTATCTATCTTATCACACA-A-------------T-------------TAAATAAATAAA----CCATCATTTCCTTTACAGAAGTACATCGCGCCATACCTCTTTGGCAAGCCCAAAAAGAAGCCGGTCGASizeHit CountTotal NormTotal
No Reads
droBia1
CGGCAGCCCTGTTCAGCGGAGTGGTGTACGCCGTCTATCTCTTCTGGAAGGTGAGCAAGCCGGG-GATCTCTATCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CGGCAGCCCTGTTCAGCGGAGTGGTGTACGCCGTCTACCTCTTCTGGAAGGTGAGTAGTTCGGG-GAT-------TCTCAATATTAGGGTACTAGTTATAGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACGAAAACCAA----CACTATTTTTGCTTACAGAAATACATTGCACCCTATCTGTTTGGCAAGCCGAAGAAGAAGCCGGTCGASizeHit CountTotal NormTotal
No Reads
droRho1
TATTTGCTCTATAAACCT---------------------------------------------------------------------------------------------------------------TAGTGAGAGTCCAAAGATCAATTTC-----TCAAGCTAATGCTCGT-----AAATCTTTAA-------------ATGTCGCAAGGGGAATTATTTAAAATATTAATTAATTATATGAGCTC--ATAAAAATAAAATTGAATTTGACCTA----TTATTTAGCGGTTAGTTTGCTAAAAATGTTGTGCAATTAATAAAATTAAATCTCTAAAGCATTTATT------------------------------------------------------------------------------------------------------------------------TTGACT----TCATCAATAAATACAAATAATT------T-------------------------TGTTCTTTTTGCAGAAATACATTGCTCCCTACATTTTTGGCAAGCCCAAGAAGAAGCCGGTCGASizeHit CountTotal NormTotal
No Reads
droFic1
CGGCGGCCCTTTTCAGCGGGGTGGTCTATGCAGTCTATCTCTTCTGGAAGGTGAGTGATA-----GTTCTGTGTTTCTG--------AATATTTT-------T-TTATT-AT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TCCAAATT------AATAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTA-------AACTTTA----CCGTTTATTCAAATTTAGAAATACATTGCTCCCTACCTTTTTGGCAAGCCCAAAAAGAAGCCCGTCGASizeHit CountTotal NormTotal
No Reads
droAna3
CGGCCGCATTATTCAGTGGAGTGGTGTACGCCGTCTACCTCTTCTGGAAGGTGAGTGTT------------------------------------------------------------TCAGCAT--AACAGAAGAGTCCAAAGATCATT-TATCTTCTTAAATTGATGTGGCT-----GACTTGG-----------------------------AAATAT-GAAAACTTAAAACAACTGTTTACGCCCCGTGAAAGGTGGAATCATTTTTTACGTT-----------------------CTTGAAACGTCTTCCTAATGATCA----------------------------------------------------------------------------------------------CCTTTGTTTA-------------AATGATTTTTAGCGCTTTTG-----TTCTAAGTAATGAAATA-A-------------T-------------TG--AAGACCTGTGACTCACGACTTTATTTTCAGAAATACATTGCTCCCTACCTGTTTGGCAAGCCGAAGAAGAAGCCCGTGGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTACCTGTTTGGCAAGCC..................2011.001100000
...................AGTGGTGTACGCCGTCTACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.....GCATTATTCAGTGGAGTGGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGACTCACGACTTTATTTT.....................................................2111.001100000
.....GCATTATTCAGTGGAGTGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGCAAGCCGAAGAAGAAG........2211.001000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGCTCCCTACCTGTTTGG........................2111.001100000
droBip1
TA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCAGAAATACATTGCTCCCTACCTATTTGGCAAGCCGAAGAAGAAGCCCGTGGASizeHit CountTotal NormTotal
No Reads
dp5
CGACGGCCCTGTTTAGTGGGGTCATCTATGCGGTGTACCTTTTCTGGAAGGTGAGTTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............TTAGTGGGGTCATCTATGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...............GTGGGGTCATCTATGCGGTGTACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010000000
.GACGGCCCTGTTTAGTGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
.......CCTGTTTAGTGGGGTCATCTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................ATCTATGCGGTGTACCTTTTCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
droPer2
CGACGGCCCTGTTTAGTGGGGTCATCTATGCGGTGTACCTGTTCTGGAAGGTGAGTTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................CATCTATGCGGTGTACCTGTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.004400000
........CTGTTTAGTGGGGTCATCTATGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000
droWil2
CGGCAGCCCTTTTTGGTGGTGTTATCTATGCCGTTTATTTATTTTGGAAGGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................ATGCCGTTTATTTATTTTGGAAGAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2511.00100100
droVir3
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAATACATTGCACCGTTTCTGTTTGGCAAGCCCAAGAGAAAACCCGTTGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGCACCGTTTCTGTTTGGCA......................2311.001000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCACCGTTTCTGTTTGGC.......................2011.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTTTGGCAAGCCCAAGAGAAAAC.......2711.001000000000000000000000000100000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTTTGGCAAGCCCAAGA.............2111.001000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACATTGCACCGTTTCT..............................1911.001000100000000000000000000000000000000000000000000000000000000000
droMoj3
TGCTAAAAATTTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGAAATTCATTGCACCATTTCTATTTGGTAAGCCAAAGAAGAAACCAGTTGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTAAGCCAAAGAAGAAACC......22200.50100000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTAAGCCAAAGAAGAAACCA.....23200.204400000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTAAGCCAAAGAAGAAACC......21200.051000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTAAGCCAAAGAAGAAAC.......21200.051000010
droGri2
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAGTACATTGCTCCATTTTTGTTTGGCAAGCCGAAGAGGAGACCAGTTGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACATTGCTCCATTTTTGTT...........................2111.00110

Generated: 05/19/2015 at 01:28 AM