ID:

dsi_21664

 Coordinate:

2l:8644018-8644167 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.0 -12.0 -11.9

Flybase annnotation

CDS [2l_8643937_8644017_+]; exon [2l_8643782_8644017_+]; intron [2l_8644018_8644977_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GCATGAGGTGCGCCAAGTACATGCTCATCATCGTGAGCTTCATGTTTGCGGTGAGTAGATGATCCTTGTTACTGAATCCCGGATCGTAGTCCTCCATTAATGCCACCCATGAATCACGGTTCCGCCATCTTGGATTATTTTCCATTTTCTGCGATTGCCTTTTTTTATCACACAGAGCACCTAGTCTTATCATCCCGTCCAGCTAAATGAGTGTGGGTGTAGTACTCTATATTTTTTGTTTTTCGCTGAT
***************************************************************..........(((....(((..(((((((.........(((.............)))...........)))))))..)))...)))....************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 M025
embryo
 M024
male body		 GSM343915
embryo
 O001
Testis
 O002
Head
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
.........................CATCATCGTGAGCTTCATGTTTGCGCT...................................................................................................................................................................................................... 27 1 1 3.00 3 2 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................GGCTAAATGAGTGTGGGTGTAGTACT........................ 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................ATGAGTGTGGGTGTAGTAC......................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..ATGAGGTGCGCCAAGTACATGCT................................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................CCTTGTTACTGAATCCCGGA....................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................ATTATTTTCCATTTTCTGCG................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................GAGCTTCATGTTTGCGCTGACC.................................................................................................................................................................................................. 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................GTGAGCTTCATGTTTGCG........................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..ATGAGGTGCGCCAAGTACATGCTC................................................................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................TCTTAACATCCCGTCCAT................................................ 18 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0
......GGTGCGCCAAGTACATGC.................................................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
................GTACATGCTCATCATCGTGAGCTT.................................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........GCCAAGTACATGCTCATCATCGT........................................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................CATCATCGTGAGCTTCATGC............................................................................................................................................................................................................. 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........CGCCAAGTACATGCTCATCATCGT........................................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.........................CATCATCGTGAGCTTCATGTTTGCGC....................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........TGCGCCAAGTACATGCTCATCATCGT........................................................................................................................................................................................................................ 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................GATTGCCTTTTTTTATCACAC............................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
................GTACATGCTCATCATCGTGA...................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................CTCATCATCGTGAGCTTCATGTTTGCG........................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....AGGTGAGCCAAGTACATGCTC................................................................................................................................................................................................................................ 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.............CAAGTACTGGCTCATCATAG......................................................................................................................................................................................................................... 20 3 4 0.75 3 0 0 0 0 0 0 0 3 0 0
....................................GCTTCATGTTTGCGCTGACC.................................................................................................................................................................................................. 20 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0
.............................................TTGCAGTGAGTAGAT.............................................................................................................................................................................................. 15 1 9 0.11 1 0 0 0 0 0 0 0 0 1 0
..............................................................................CCGGATCGTAGTCTGCAA.......................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1
...............................................................................................................AATTATGGTTCCACCATCT........................................................................................................................ 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CGTACTCCACGCGGTTCATGTACGAGTAGTAGCACTCGAAGTACAAACGCCACTCATCTACTAGGAACAATGACTTAGGGCCTAGCATCAGGAGGTAATTACGGTGGGTACTTAGTGCCAAGGCGGTAGAACCTAATAAAAGGTAAAAGACGCTAACGGAAAAAAATAGTGTGTCTCGTGGATCAGAATAGTAGGGCAGGTCGATTTACTCACACCCACATCATGAGATATAAAAAACAAAAAGCGACTA
*************************************************************************************************..........(((....(((..(((((((.........(((.............)))...........)))))))..)))...)))....*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M023
head
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
.............................................................................................................................................................................................................TTACTCACACCTAGATCATG......................... 20 2 2 3.00 6 0 4 2 0 0 0 0
...........................................AAAACTGCACTCATCTACTAG.......................................................................................................................................................................................... 21 3 3 2.33 7 7 0 0 0 0 0 0
.............................................................................................................................................................................................................TTACTCACACCAAGATCATG......................... 20 2 2 0.50 1 0 0 1 0 0 0 0
............................................................................................................................................................................................................TTTACTCACACCGAGATCAGG......................... 21 3 2 0.50 1 0 0 0 0 0 1 0
..................................................CACCGATCTACAAGGAACAA.................................................................................................................................................................................... 20 3 2 0.50 1 0 0 0 0 1 0 0
.......................................................................................................................AAGGCGGTAGACCCT.................................................................................................................... 15 1 12 0.42 5 0 0 0 5 0 0 0
........................................................................ACTGAGGGCCTATCATGAG............................................................................................................................................................... 19 3 3 0.33 1 0 0 0 1 0 0 0
...........................................AAAACTGCACTCATCTACTA........................................................................................................................................................................................... 20 3 6 0.17 1 1 0 0 0 0 0 0
.......................................................................................................................AAGGCGGTAGATCCT.................................................................................................................... 15 1 6 0.17 1 0 0 0 1 0 0 0
......................................................................................................................CAAGGCGGTAGACCC..................................................................................................................... 15 1 9 0.11 1 0 0 0 1 0 0 0
...............................................................................................................................................................AAAAAAATAGTCTGGCTCAT....................................................................... 20 3 11 0.09 1 0 1 0 0 0 0 0
.....................................................................................................................................................................................................AGGTAGATTTACTCA...................................... 15 1 17 0.06 1 0 1 0 0 0 0 0
.................................................................................................................AGTGCGAAGGTGGTAG......................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:8643968-8644217 + dsi_21664 GCATGAGGTGCGCCAAGTACATGCTCATCATCGTGAGCTTCATGTTTGCGGTGAGTA---GATGATCCTT---GTTACTGAATCCCGGA---------------------------------T--C--------------------GTAGTCCTCCATTAATGCCACCCATGAATCACG--GTT---CCGCCATCTTGGATTATTTT-CCAT--TTTCTGCGATTGCCT--TTTT------------TTATCAC--ACAGAGCA--CCTAGTCTTATCATCCCGTCCAGCTAAATG--AGTGTGGGTGTA------GTA-CTCTATA--TTTTTTG-------TTTT----------------TCGCTGAT
droSec2 scaffold_3:4411980-4412244 + GCATGAGGTGCGCCAAGTACATGCTCATCATCGTGAGCTTCATGTTTGCGGTGAGTA---GATGATCCTT---GTTACTGAATCCCGGA---------------------------------C--C--------------------GTAGTCCTCCATTAATGCCACCCATGAATCACG--GTT---CCGCCATCTTGGATTATTTT-CCAT--TTTCTGCGATTGCCTT-TTTT------------TTATCAC--ACAGAGCA--CTTAGTCTTATCATCCCGTCCAGCTAAATG--AGTGTGGGTGTA------GCA-CTCTATAT-TTTTTTG-------TTTT---GCGCCTACGTAAGTCGCTGAT
dm3 chr2L:8937582-8937846 + GCATGAAGTGCGCCAAGTACATGCTCATCATCGTGAGCTTCATGTTTGCGGTGAGTA---GATGATCCTT---GATACTGGATCCCGGA---------------------------------T--C--------------------GTAATCCTCCATTAATTCCACCCATGAATCACT--GTT---CCGCCATCTTGGGTTATTTT-CCAT--TTTCTGCGATTGCCTT-TTTT------------TTATCAC--ACTGAGCA--CCTAGTCTTATCATCC-GTCGAGGTAAACG--AGTGTGGGTATA------GCA-CTCTATATATTTTTTG-------TTTT---GCGCCTACGTATGTCGCTGAT
droEre2 scaffold_4929:9534190-9534441 + GCATGAAGTGCGCCAAGTACATGCTCGTCATCGTGAGCTTCATGTTCGCGGTGAGTA---GA---TCCTTC----------ATCCTGGA---------------------------------T--C--------------------GTGATCCTTCACCAAGGCCACCCGTGAATCATT--GCT---CCGCCATCTTGACTCATTTT-CCAT--TTTCTGCGTTTGCC---TTTC------------TTATCAC--ACAGAGCACACCCAGTCTTATCATCC-GTCGAGGTAAACG--AGTGTGGGTGTA------GCA-CTTTAT---TTTTTTG-------TTTT---GCGCCTACGTAAGTCGCTGAT
droYak3 2L:11587129-11587401 + GCATGAGGTGCGCCAAGTACATGCTCATCATCGTGAGCTTCATGTTTGCGGTGAGTA---GA---TCCTGCA----------TCCTGCA-T----CCTGCGTCCTGCATCTTGGATCCTCGAA--C--------------------ATACTCCTCCATCAATGCCAACCATGAATCACT--ACT---CCGCCATCTTGGCTTATTTT-CCAT--TTTCTGCGATTGCC---TTTT------------TTATCAC--ACAGAGCA--CCTAGTCTTATCA-----TGGAGCTAAATT--TGTGTGGGTGCA------GCA-CTTTA----TTTTGTG-------TTTT---GCACCTACGTAAGTCGCTGAT
droEug1 scf7180000409554:544809-545048 - GCATGCGGTGCGCCAAGTACATGCTCATCATCGTGAGCTTTATGTTTGCGGTGAGTT---GA---TCCC-----------------TGAAG-------------------------------T--C--------------------GAAATCCTCTAGAAATTCCATCCATGAATCACT--ACTGCGCCGCCATCTTGATTTATT----------------------------TT------------TTATCAA--ATGGAACA--CTCACTCTTATCAGCT-TTTCAGGTAATAGAGTGTGTGGGTGTTGGGTTATTG-TTT---TT-TTTTTTGTTAACTTTTTT---GCGCCTACGTAAGACGTTGTT
droBia1 scf7180000301518:785308-785543 - GCATGAAGTGCGCCAAGTACATGCTCATCATCGTGAGCTTCATGTTCGCGGTGAGTC---GA---TCCT-----------------GGA---------------------------------T--G--------------------TTAATCATTCAATAGGGCCATCCATGAATCACA--ATT---CCGCCATCTTGACTCATTTT-CCAC--TTTCTGCGTGTGCT---TGTT------------TTATCAC--ATAATACA--CCTACTCTTATCAGCC-TTAGAGGTAAACAAGAGTGTGGGTGCT------GC---------T-GTTATTGTGAATCATTTT---TCACACAC----------GAT
droTak1 scf7180000415876:582417-582663 - GCATGAAGTGCGCCAAATACATGCTCATCATCGTGAGCTTTATGTTTGCGGTGAGTC---GA---TCCT-----------------GGA---------------------------------T--G--------------------TTAATCCTTGAATAATGCATTTCATGAATCACA--TTT---CCGCCATCTTGATTTATTTT-CCAT--TTTCTGCGTATTCT----TTT------------TTATCAT--ATAAAACA--CCTATTCTTATCAGCT-ATAGAGGAATATTAGAGTGTGGGTGTA------GTA-T------T-TTTTTTGTGAATCATTTT---GCGCCTACGTAAGTCGCTGAT
droEle1 scf7180000491186:1814512-1814762 + GCATGAAGTGCGCCAAATACATGCTCATCATAGTGAGCTTTATGTTTGCGGTGAGTC---GA---TCCT-----------------GGA---------------------------------G--C--------------------CTAATCCTTTATTTATTCGATCCATGAATCACA--ATT---CCGCCATTTTGATTTATTTC-CATT--TTTCTGCGCGTTCT---TTTT------------TTATGAT--ATGGCACA--CCTATTCTTATCAACC-ATTAAGAAATGCGTGTGTGTTGGTATA------GTT-CTTT---T-TTTTTTGTGAATCATTTT---TCTCCTACGTAAGTAGGTGAT
droRho1 scf7180000777214:341638-341883 - GCATGAAGTGCGCCAAATACATGCTCATCATAGTGAGCTTTATGTTTGCGGTGAGTC---GA---TCCT-----------------GCA---------------------------------G--C--------------------CTAATCCTTTATTAATTCGATCCATGAATCACA--TTG---CCGCCATCTTGATTCACTTC-CATT--TTTCTGCGCGTTCTAT-TTTT------------TTATCAT--ATAGAACA--CCTATTCTTATCAACC-GTTGAGCAAATCGTTTGTGTTGGTATA------GTT-TTTTA----TTTTTTGTGAATCACTTT---CAACCTACGTAAGT-------
droFic1 scf7180000454102:77051-77296 - GCATGAAGTGCGCCAAATACATGCTCATCATCGTGAGCTTTATGTTTGCGGTGAGTC---GA---TCCT-----------------TGG---------------------------------G--T--------------------TTAAGCCTCCATTATTGCAGTTTGTGAATCACA---TT---CCGCCATCTTGATATTTTTC-CATT--TTTCTGCGCGTTCTTT-TCTT------------TTATCAT--ATAGAGCA--CTTTTCCTTATCAACC-TTTAAGTTAATTGTGTGGGTGGGAGTA------GT-----------TTTTTTGTGATTCATTTT---GCGCCTACGTAAGTCGCCGAT
droKik1 scf7180000301476:193117-193354 + GCATGAAGTGCGCCAAATACATGCTCATCATTGTGAGCTTTATGTTTGCGGTGAGTT---GA---TCCTGCT----AATG--------ATGATAA---------------------------T--G--------------------ATAATCC-------------TGCGTGAGTCACG--ACTCCGCCGCCATCTTGATTCATTTT-CACT--CTTTTGCGCGTTCT---TTTT------------TTATCAC--ACGGAGCG--ATT-TCCTTATCAGCT-TTCGG------CG--AGTATAGGTT------------------TT-TTATATGTGAATCATATTACTGCGCCTACGTAAGTCGCTCAC
droAna3 scaffold_12916:10601670-10601910 + GAATGCGGTGCGCCAAATATATGCTCATTATTGTGAGCTTTATGTTTGCGGTGAGTT---GA---TCCTTCAGG------------------------------------------------G--C------------------------------ATTA-CAAACTCCGTGATTCACA--G-T---CCGCCATCTTGAGTCATTTT-TCATTTTTTCTGCGTGTTTC---ATTT------------TTATCAA--ATAGACCG--TAT-TTCTTATCAGCA-TTGGT--ATTGTGTGGGTGTGGGTTTT------GTT-TTTGG--T-TTTTTTGTGAATCATTTT---GCGTTTACGTATATCGCTGAT
droBip1 scf7180000396572:262076-262315 + GAATGCGGTGCGCCAAGTATATGCTCATCATTGTGAGCTTTATGTTTGCGGTGAGTT---GA---TCCTCCAGG--------------------------------------------------------------------------------CCATTA-CGAACTCCGTGATTCACA--A-T---CCGCCATCTTGAGTCATTTTTCCTA--TTTCTGCGCGTTTC---ATTT------------TTATCAA--ATAGACCG--CAT-TTCTTATCAGCA-GTGGA--AT------TGTGTGGGTGTA-GGTTTTTGCTTTT--GT-TTTTTTGTGAATCATTTA---ACTTTTACGTATATCGCTGAT
dp5 4_group5:564674-564955 - GCATGCGATGCGCTAAATATATGCTCATCATAGTGAGCTTTATGTTTGCGGTAAGTCCT-GCGGATCTTC--------------------------------------------------GCA--CTTTCCAT----GAATGAATCGCA-CCCTCCATGA-----ATCCATGAATCACA--AG--AGTCGCCATTTTGATTCGATTT-CATT--AGATTTCGCCTCCTTCCTTCATTATCATTATCATTATCACTCATTGAGTCCGCC--TGCTTATCAGCT-TTTGG--TTTTTCTTTGTATGGGTGTA------ATA-CCTTGTTT-TTTTTTGTGATTCATTAT---GTGCCTACGTAAGTC---GAT
droPer2 scaffold_5:5068855-5069136 - GCATGCGATGCGCTAAATATATGCTCATCATAGTGAGCTTTATGTTTGCGGTAAGTCCT-GCGGATCTTC--------------------------------------------------GCA--CTTTCCAT----GAATGAATCGCA-CCCTCCATGA-----ATCCATGAATCACA--AG--AGTCGCCATTTTGATTCGATTT-CATT--AGATTTCGCCTCCTTCCTTCATTATCATTATCATTATCACTCATTGAGTCCGCC--TGCTTATCAGCT-TTTGG--TTTTTCTTTGTGTGGGTGTA------ATA-CCTTGTTT-TTTTTTGTGATTCATTAT---GTGCCTACGTAAGTC---GAT
droWil2 scf2_1100000004585:279545-279703 + GCATGCGATGTGCCAAATATATGCTCATCATAGTGAGCTTTATGTTTGCGGTAAGTTTTCAAAGAGTTTT--------------TC----------------------------------AAAACATTTCCATTGTGGAAAGTATTGCA-AGGCTCCTGC---TCACCTATGAATCACACAAGA---TCGCCATTTTGGATTTTATA-ACAG--TTT----------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12723:4983580-4983635 + GAATGCGCTGCGCCAAATATATGCTCATCATAGTGAGCTTTATGTTCGCGGTGAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:10988735-10988789 + GAATGCGCTGCGCCAAATATATGCTCATCATAGTGAGCTTTATGTTTGCGGTAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15126:7987205-7987259 + GAATGCGCTGCGCCAAATATATGCTCATTATAGTGAGCTTTATGTTTGCGGTAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GCATGAGGTGCGCCAAGTACATGCTCATCATCGTGAGCTTCATGTTTGCGGTGAGTA---GATGATCCTT---GTTACTGAATCCCGGA---------------------------------T--C--------------------GTAGTCCTCCATTAATGCCACCCATGAATCACG--GTT---CCGCCATCTTGGATTATTTT-CCAT--TTTCTGCGATTGCCT--TTTT------------TTATCAC--ACAGAGCA--CCTAGTCTTATCATCCCGTCCAGCTAAATG--AGTGTGGGTGTA------GTA-CTCTATA--TTTTTTG-------TTTT----------------TCGCTGATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................ATG--AGTGTGGGTGTA------GTA-C..................................................1911.00100100000000000000
..ATGAGGTGCGCCAAGTACATGCT..........................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
..................................................................CCTT---GTTACTGAATCCCGGA---------------------------------.........................................................................................................................................................................................................................................................2011.00100001000000000000
.......................................................................................................................................................................................................ATTATTTT-CCAT--TTTCTGCG.....................................................................................................................................................2011.00100100000000000000
................................GTGAGCTTCATGTTTGCG.................................................................................................................................................................................................................................................................................................................................1811.00100000000000100000
..ATGAGGTGCGCCAAGTACATGCTC.........................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
......GGTGCGCCAAGTACATGC...........................................................................................................................................................................................................................................................................................................................................................1811.00100000100000000000
................GTACATGCTCATCATCGTGAGCTT...........................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
...........GCCAAGTACATGCTCATCATCGT.................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
.........................CATCATCGTGAGCTTCATGC......................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
..........CGCCAAGTACATGCTCATCATCGT.................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
.........................CATCATCGTGAGCTTCATGTTTGCGC................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
........TGCGCCAAGTACATGCTCATCATCGT.................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
.............................................................................................................................................................................................................................GATTGCCT--TTTT------------TTATCAC--AC.................................................................................................................2111.00100001000000000000
................GTACATGCTCATCATCGTGA...............................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
.......................CTCATCATCGTGAGCTTCATGTTTGCG.................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
droSec2
GCATGAGGTGCGCCAAGTACATGCTCATCATCGTGAGCTTCATGTTTGCGGTGAGTA---GATGATCCTT---GTTACTGAATCCCGGA---------------------------------C--C--------------------GTAGTCCTCCATTAATGCCACCCATGAATCACG--GTT---CCGCCATCTTGGATTATTTT-CCAT--TTTCTGCGATTGCCTT-TTTT------------TTATCAC--ACAGAGCA--CTTAGTCTTATCATCCCGTCCAGCTAAATG--AGTGTGGGTGTA------GCA-CTCTATAT-TTTTTTG-------TTTT---GCGCCTACGTAAGTCGCTGATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..ATGAGGTGCGCCAAGTACATGCT..........................................................................................................................................................................................................................................................................................................................................................2313.0030120
...TGAGGTGCGCCAAGTACATGCT..........................................................................................................................................................................................................................................................................................................................................................2211.0011000
.................TACATGCTCATCATCGTGA...............................................................................................................................................................................................................................................................................................................................................1911.0010010
.........................CATCATCGTGAGCTTCATGTTTGC..................................................................................................................................................................................................................................................................................................................................2411.0010100
..ATGAGGTGCGCCAAGTACATGCTC.........................................................................................................................................................................................................................................................................................................................................................2411.0010010
................GTACATGCTCATCATCGTGAG..............................................................................................................................................................................................................................................................................................................................................2111.0010010
................GTACATGCTCATCATCGTGA...............................................................................................................................................................................................................................................................................................................................................2011.0011000
.CATGAGGTGCGCCAAGTACATG............................................................................................................................................................................................................................................................................................................................................................2211.0010010
..ATGAGGTGCGCCAAGTACATGC...........................................................................................................................................................................................................................................................................................................................................................2211.0010100
.........................CATCATCGTGAGCTTCATG.......................................................................................................................................................................................................................................................................................................................................1911.0011000
..........................ATCATCGTGAGCTTCATGTTTGCG.................................................................................................................................................................................................................................................................................................................................2411.0010010
.......................................................................................................................................................................................................ATTATTTT-CCAT--TTTCTGCGAT...................................................................................................................................................2211.0010010
...........GCCAAGTACATGCTCATCATCGT.................................................................................................................................................................................................................................................................................................................................................2311.0010100
dm3
GCATGAAGTGCGCCAAGTACATGCTCATCATCGTGAGCTTCATGTTTGCGGTGAGTA---GATGATCCTT---GATACTGGATCCCGGA---------------------------------T--C--------------------GTAATCCTCCATTAATTCCACCCATGAATCACT--GTT---CCGCCATCTTGGGTTATTTT-CCAT--TTTCTGCGATTGCCTT-TTTT------------TTATCAC--ACTGAGCA--CCTAGTCTTATCATCC-GTCGAGGTAAACG--AGTGTGGGTATA------GCA-CTCTATATATTTTTTG-------TTTT---GCGCCTACGTATGTCGCTGATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..ATGAAGTGCGCCAAGTACATGCT..........................................................................................................................................................................................................................................................................................................................................................2315.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000002000010000000
................GTACATGCTCATCATCGT.................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000100000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000
.........................CATCATCGTGAGCTTCATGTTTG...................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000100000000
...............................CGTGAGCTTCATGTTTGC..................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000000000000000
..ATGAAGTGCGCCAAGTACATGCTC.........................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GTGAGCTTCATGTTTGCG.................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AGTGCGCCAAGTACATGCT..........................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GTGCGCCAAGTACATGCT..........................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ATCGTGAGCTTCATGTTTGC..................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................TTTCTGCGATTGCCTT-TTTT------------TTAT........................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CATCATCGTGAGCTTCATG.......................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
GCATGAAGTGCGCCAAGTA................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GAAGTGCGCCAAGTACAT.............................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CATCATCGTGAGCTTCATGTTTGCG.................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................TTGCGGTGAGTA---GATGATCCTT---G.........................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..................ACATGCTCATCATCGTGAGCTT...........................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GTGCGCCAAGTACATGCTCATCATC...................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TCATCGTGAGCTTCATGTTTGCG.................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.CATGAAGTGCGCCAAGTAC...............................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CGTGAGCTTCATGTTTGCG.................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........................CATCATCGTGAGCTTCAT........................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ATGAAGTGCGCCAAGTACATGCTCAT.......................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ATGAAGTGCGCCAAGTACA..............................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........TGCGCCAAGTACATGCTC.........................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GCATGAAGTGCGCCAAGTACATG............................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TCATCGTGAGCTTCATGTTTGCGC................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GCTCATCATCGTGAGCTTCATGTTTGCG.................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AGTACATGCTCATCATCGTGA...............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ATGCTCATCATCGTGAGCTT...........................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TA------GCA-CTCTATATATTTTTTG-------TTTT---GCG..................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................AATTCCACCCATGAATCACT--G.............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GAAGTGCGCCAAGTACATG............................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ATCATCGTGAGCTTCATGTTTGCG.................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......GTGCGCCAAGTACATGCTC.........................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ATGAAGTGCGCCAAGTAA...............................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
droEre2
GCATGAAGTGCGCCAAGTACATGCTCGTCATCGTGAGCTTCATGTTCGCGGTGAGTA---GA---TCCTTC----------ATCCTGGA---------------------------------T--C--------------------GTGATCCTTCACCAAGGCCACCCGTGAATCATT--GCT---CCGCCATCTTGACTCATTTT-CCAT--TTTCTGCGTTTGCC---TTTC------------TTATCAC--ACAGAGCACACCCAGTCTTATCATCC-GTCGAGGTAAACG--AGTGTGGGTGTA------GCA-CTTTAT---TTTTTTG-------TTTT---GCGCCTACGTAAGTCGCTGATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..ATGAAGTGCGCCAAGTACATGCT..........................................................................................................................................................................................................................................................................................................................................................2317.0071000330
..ATGAAGTGCGCCAAGTACATGCTCGT.......................................................................................................................................................................................................................................................................................................................................................2613.0030000210
......AGTGCGCCAAGTACATGCTCGTCATC...................................................................................................................................................................................................................................................................................................................................................2612.0020000110
.........GCGCCAAGTACATGCTCGTCATC...................................................................................................................................................................................................................................................................................................................................................2312.0020001010
..ATGAAGTGCGCCAAGTACATG............................................................................................................................................................................................................................................................................................................................................................2112.0020000200
.........GCGCCAAGTACATGCTCGTCATCGTGA...............................................................................................................................................................................................................................................................................................................................................2712.0021100000
............CCAAGTACATGCTCGTCATCGTGA...............................................................................................................................................................................................................................................................................................................................................2412.0021000100
................GTACATGCTCGTCATCGTGA...............................................................................................................................................................................................................................................................................................................................................2012.0020001100
....GAAGTGCGCCAAGTACATGCT..........................................................................................................................................................................................................................................................................................................................................................2111.0010000100
.CATGAAGTGCGCCAAGTACATGCTCGTC......................................................................................................................................................................................................................................................................................................................................................2811.0010000100
..........................GTCATCGTGAGCTTCATGTT.....................................................................................................................................................................................................................................................................................................................................2011.0011000000
...............AGTACATGCTCGTCATCGT.................................................................................................................................................................................................................................................................................................................................................1911.0011000000
......................................................................................................................................................................................................................................................................CACACCCAGTCTTATCATCC-GTCGAGC.................................................................................2711.0010000100
..ATGAAGTGCGCCAAGTACATGCTCGTC......................................................................................................................................................................................................................................................................................................................................................2711.0010100000
..................ACATGCTCGTCATCGTGAGC.............................................................................................................................................................................................................................................................................................................................................2011.0010100000
........................................................................................A---------------------------------T--C--------------------GTGATCCTTCACCAAGGCT..............................................................................................................................................................................................................2211.0011000000
............CCAAGTACATGCTCGTCATC...................................................................................................................................................................................................................................................................................................................................................2011.0011000000
.............................ATCGTGAGCTTCATGTTCG...................................................................................................................................................................................................................................................................................................................................1911.0010000100
.............CAAGTACATGCTCGTCATCGTGA...............................................................................................................................................................................................................................................................................................................................................2311.0010000100
....GAAGTGCGCCAAGTACATG............................................................................................................................................................................................................................................................................................................................................................1911.0010000100
.......GTGCGCCAAGTACATGCTCGTCATC...................................................................................................................................................................................................................................................................................................................................................2511.0010100000
...................CATGCTCGTCATCGTGAGCTTCAT........................................................................................................................................................................................................................................................................................................................................2411.0011000000
..............AAGTACATGCTCGTCATCGTGA...............................................................................................................................................................................................................................................................................................................................................2211.0010000010
......AGTGCGCCAAGTACATGCTC.........................................................................................................................................................................................................................................................................................................................................................2011.0010001000
..............................................CGCGGTGAGTA---GA---TCCTTC----------A.................................................................................................................................................................................................................................................................................................2011.0011000000
....................................GCTTCATGTTCGCGGTGAG............................................................................................................................................................................................................................................................................................................................1911.0010000100
....GAAGTGCGCCAAGTACATGCTCGTCATC...................................................................................................................................................................................................................................................................................................................................................2811.0010100000
.....AAGTGCGCCAAGTACATGCTCGTCATC...................................................................................................................................................................................................................................................................................................................................................2711.0010001000
..ATGAAGTGCGCCAAGTACATGCTCGTCA.....................................................................................................................................................................................................................................................................................................................................................2811.0010000100
....GAAGTGCGCCAAGTACATGCTCGTCAT....................................................................................................................................................................................................................................................................................................................................................2711.0010000100
...............AGTACATGCTCGTCATCGTGA...............................................................................................................................................................................................................................................................................................................................................2111.0010000100
.......GTGCGCCAAGTACATGCTCGTCATCGTG................................................................................................................................................................................................................................................................................................................................................2811.0010100000
.........GCGCCAAGTACATGCTCGT.......................................................................................................................................................................................................................................................................................................................................................1911.0010001000
....GAAGTGCGCCAAGTACATGCTC.........................................................................................................................................................................................................................................................................................................................................................2211.0010100000
.......GTGCGCCAAGTACATGCTCGTCATCGT.................................................................................................................................................................................................................................................................................................................................................2711.0011000000
......................GCTCGTCATCGTGAGCTTCATGTT.....................................................................................................................................................................................................................................................................................................................................2411.0011000000
...TGAAGTGCGCCAAGTACATGCTCGTCAT....................................................................................................................................................................................................................................................................................................................................................2811.0010100000
...TGAAGTGCGCCAAGTACATGCTC.........................................................................................................................................................................................................................................................................................................................................................2311.0011000000
................GTACATGCTCGTCATCGTG................................................................................................................................................................................................................................................................................................................................................1911.0011000000
....................ATGCTCGTCATCGTGAGC.............................................................................................................................................................................................................................................................................................................................................1811.0010100000
..ATGAAGTGCGCCAAGTACAT.............................................................................................................................................................................................................................................................................................................................................................2011.0010000100
.CATGAAGTGCGCCAAGTA................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
................GTACATGCTCGTCATCGT.................................................................................................................................................................................................................................................................................................................................................1811.0011000000
droYak3
GCATGAGGTGCGCCAAGTACATGCTCATCATCGTGAGCTTCATGTTTGCGGTGAGTA---GA---TCCTGCA----------TCCTGCA-T----CCTGCGTCCTGCATCTTGGATCCTCGAA--C--------------------ATACTCCTCCATCAATGCCAACCATGAATCACT--ACT---CCGCCATCTTGGCTTATTTT-CCAT--TTTCTGCGATTGCC---TTTT------------TTATCAC--ACAGAGCA--CCTAGTCTTATCA-----TGGAGCTAAATT--TGTGTGGGTGCA------GCA-CTTTA----TTTTGTG-------TTTT---GCACCTACGTAAGTCGCTGATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................CATCATCGTGAGCTTCATGTTTGCG.................................................................................................................................................................................................................................................................................................................................25116.0016010000150000
..ATGAGGTGCGCCAAGTACATGCT..........................................................................................................................................................................................................................................................................................................................................................2317.00703010030000
.............CAAGTACATGCTCATCATCGT.................................................................................................................................................................................................................................................................................................................................................2115.00502000030000
..ATGAGGTGCGCCAAGTACATG............................................................................................................................................................................................................................................................................................................................................................2114.00400000040000
..ATGAGGTGCGCCAAGTACATGCTC.........................................................................................................................................................................................................................................................................................................................................................2414.00401000030000
................GTACATGCTCATCATCGTGA...............................................................................................................................................................................................................................................................................................................................................2013.00303000000000
.CATGAGGTGCGCCAAGTACATGCT..........................................................................................................................................................................................................................................................................................................................................................2413.00301000020000
.........................CATCATCGTGAGCTTCATGTTTGC..................................................................................................................................................................................................................................................................................................................................2413.00300000030000
.........................CATCATCGTGAGCTTCATGTT.....................................................................................................................................................................................................................................................................................................................................2112.00200000020000
.......................CTCATCATCGTGAGCTTCATGTTTGCG.................................................................................................................................................................................................................................................................................................................................2712.00201000010000
.........................CATCATCGTGAGCTTCATGTTTGCGC................................................................................................................................................................................................................................................................................................................................2612.00200000020000
...........GCCAAGTACATGCTCATCATCGT.................................................................................................................................................................................................................................................................................................................................................2312.00200001010000
.........................CATCATCGTGAGCTTCATGTTT....................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.........................CATCATCGTGAGCTTCAT........................................................................................................................................................................................................................................................................................................................................1811.00100010000000
..........................ATCATCGTGAGCTTCATGTTTGCGC................................................................................................................................................................................................................................................................................................................................2511.00100000010000
..........................ATCATCGTGAGCTTCATGTTTGCG.................................................................................................................................................................................................................................................................................................................................2411.00100000010000
......................................................................................................................................................................................................................................................................................A-----TGGAGCTAAATT--TGTGTGGGTGC..............................................................2411.00101000000000
GCATGAGGTGCGCCAAGTACAT.............................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
..........................ATCATCGTGAGCTTCATGTTTGC..................................................................................................................................................................................................................................................................................................................................2311.00100000010000
.......................CTCATCATCGTGAGCTTCATGTTTGC..................................................................................................................................................................................................................................................................................................................................2611.00101000000000
............................CATCGTGAGCTTCATGTTTGC..................................................................................................................................................................................................................................................................................................................................2111.00100000010000
..........................ATCATCGTGAGCTTCATGTTT....................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.............CAAGTACATGCTCATCATCGTG................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
............CCAAGTACATGCTCATCATCG..................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
...............AGTACATGCTCATCATCGTG................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
.CATGAGGTGCGCCAAGTACA..............................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.........................CATCATCGTGAGCTTCATGTTTG...................................................................................................................................................................................................................................................................................................................................2311.00100000010000
..............AAGTACATGCTCATCATCGTG................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
...........................................................................................................................................................................GAATCACT--ACT---CCGCCATCTT..............................................................................................................................................................................2111.00101000000000
........................TCATCATCGTGAGCTTCATG.......................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...........GCCAAGTACATGCTCATCATCGTGA...............................................................................................................................................................................................................................................................................................................................................2511.00101000000000
..ATGAGGTGCGCCAAGTACATGC...........................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
...........................................................................................................................................................................................................................................................CAC--ACAGAGCA--CCTAGTCTTAT..............................................................................................2211.00100000010000
.........................CATCATCGTGAGCTTCATG.......................................................................................................................................................................................................................................................................................................................................1911.00100000010000
................GTACATGCTCATCATCGTG................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.......................CTCATCATCGTGAGCTTCATGT......................................................................................................................................................................................................................................................................................................................................2211.00101000000000
....GAGGTGCGCCAAGTACATGCT..........................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.......................CTCATCATCGTGAGCTTCAT........................................................................................................................................................................................................................................................................................................................................2011.00101000000000
..ATGAGGTGCGCCAAGTACA..............................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
..ATGAGGTGCGCCAAGTACAT.............................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..............AAGTACATGCTCATCATCGT.................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
droEug1
GCATGCGGTGCGCCAAGTACATGCTCATCATCGTGAGCTTTATGTTTGCGGTGAGTT---GA---TCCC-----------------TGAAG-------------------------------T--C--------------------GAAATCCTCTAGAAATTCCATCCATGAATCACT--ACTGCGCCGCCATCTTGATTTATT----------------------------TT------------TTATCAA--ATGGAACA--CTCACTCTTATCAGCT-TTTCAGGTAATAGAGTGTGTGGGTGTTGGGTTATTG-TTT---TT-TTTTTTGTTAACTTTTTT---GCGCCTACGTAAGACGTTGTTSizeHit CountTotal NormTotal
No Reads
droBia1
GCATGAAGTGCGCCAAGTACATGCTCATCATCGTGAGCTTCATGTTCGCGGTGAGTC---GA---TCCT-----------------GGA---------------------------------T--G--------------------TTAATCATTCAATAGGGCCATCCATGAATCACA--ATT---CCGCCATCTTGACTCATTTT-CCAC--TTTCTGCGTGTGCT---TGTT------------TTATCAC--ATAATACA--CCTACTCTTATCAGCC-TTAGAGGTAAACAAGAGTGTGGGTGCT------GC---------T-GTTATTGTGAATCATTTT---TCACACAC----------GATSizeHit CountTotal NormTotal
No Reads
droTak1
GCATGAAGTGCGCCAAATACATGCTCATCATCGTGAGCTTTATGTTTGCGGTGAGTC---GA---TCCT-----------------GGA---------------------------------T--G--------------------TTAATCCTTGAATAATGCATTTCATGAATCACA--TTT---CCGCCATCTTGATTTATTTT-CCAT--TTTCTGCGTATTCT----TTT------------TTATCAT--ATAAAACA--CCTATTCTTATCAGCT-ATAGAGGAATATTAGAGTGTGGGTGTA------GTA-T------T-TTTTTTGTGAATCATTTT---GCGCCTACGTAAGTCGCTGATSizeHit CountTotal NormTotal
No Reads
droEle1
GCATGAAGTGCGCCAAATACATGCTCATCATAGTGAGCTTTATGTTTGCGGTGAGTC---GA---TCCT-----------------GGA---------------------------------G--C--------------------CTAATCCTTTATTTATTCGATCCATGAATCACA--ATT---CCGCCATTTTGATTTATTTC-CATT--TTTCTGCGCGTTCT---TTTT------------TTATGAT--ATGGCACA--CCTATTCTTATCAACC-ATTAAGAAATGCGTGTGTGTTGGTATA------GTT-CTTT---T-TTTTTTGTGAATCATTTT---TCTCCTACGTAAGTAGGTGATSizeHit CountTotal NormTotal
No Reads
droRho1
GCATGAAGTGCGCCAAATACATGCTCATCATAGTGAGCTTTATGTTTGCGGTGAGTC---GA---TCCT-----------------GCA---------------------------------G--C--------------------CTAATCCTTTATTAATTCGATCCATGAATCACA--TTG---CCGCCATCTTGATTCACTTC-CATT--TTTCTGCGCGTTCTAT-TTTT------------TTATCAT--ATAGAACA--CCTATTCTTATCAACC-GTTGAGCAAATCGTTTGTGTTGGTATA------GTT-TTTTA----TTTTTTGTGAATCACTTT---CAACCTACGTAAGT-------SizeHit CountTotal NormTotal
No Reads
droFic1
GCATGAAGTGCGCCAAATACATGCTCATCATCGTGAGCTTTATGTTTGCGGTGAGTC---GA---TCCT-----------------TGG---------------------------------G--T--------------------TTAAGCCTCCATTATTGCAGTTTGTGAATCACA---TT---CCGCCATCTTGATATTTTTC-CATT--TTTCTGCGCGTTCTTT-TCTT------------TTATCAT--ATAGAGCA--CTTTTCCTTATCAACC-TTTAAGTTAATTGTGTGGGTGGGAGTA------GT-----------TTTTTTGTGATTCATTTT---GCGCCTACGTAAGTCGCCGATSizeHit CountTotal NormTotal
No Reads
droKik1
GCATGAAGTGCGCCAAATACATGCTCATCATTGTGAGCTTTATGTTTGCGGTGAGTT---GA---TCCTGCT----AATG--------ATGATAA---------------------------T--G--------------------ATAATCC-------------TGCGTGAGTCACG--ACTCCGCCGCCATCTTGATTCATTTT-CACT--CTTTTGCGCGTTCT---TTTT------------TTATCAC--ACGGAGCG--ATT-TCCTTATCAGCT-TTCGG------CG--AGTATAGGTT------------------TT-TTATATGTGAATCATATTACTGCGCCTACGTAAGTCGCTCACSizeHit CountTotal NormTotal
No Reads
droAna3
GAATGCGGTGCGCCAAATATATGCTCATTATTGTGAGCTTTATGTTTGCGGTGAGTT---GA---TCCTTCAGG------------------------------------------------G--C------------------------------ATTA-CAAACTCCGTGATTCACA--G-T---CCGCCATCTTGAGTCATTTT-TCATTTTTTCTGCGTGTTTC---ATTT------------TTATCAA--ATAGACCG--TAT-TTCTTATCAGCA-TTGGT--ATTGTGTGGGTGTGGGTTTT------GTT-TTTGG--T-TTTTTTGTGAATCATTTT---GCGTTTACGTATATCGCTGATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................CATTATTGTGAGCTTTATGTTTGC..................................................................................................................................................................................................................................................................................................................................2415.005010040
.........................CATTATTGTGAGCTTTATGTTTGCG.................................................................................................................................................................................................................................................................................................................................2512.002000020
.........................CATTATTGTGAGCTTTATG.......................................................................................................................................................................................................................................................................................................................................1912.002001010
................................GTGAGCTTTATGTTTGCGGTG..............................................................................................................................................................................................................................................................................................................................2112.002000002
..ATGCGGTGCGCCAAATATATGCT..........................................................................................................................................................................................................................................................................................................................................................2312.002110000
....GCGGTGCGCCAAATATATGCT..........................................................................................................................................................................................................................................................................................................................................................2112.002110000
..ATGCGGTGCGCCAAATATATGCTCATT......................................................................................................................................................................................................................................................................................................................................................2711.001010000
.........................CATTATTGTGAGCTTTATGTTTG...................................................................................................................................................................................................................................................................................................................................2311.001000001
.AATGCGGTGCGCCAAATATATG............................................................................................................................................................................................................................................................................................................................................................2211.001100000
......GGTGCGCCAAATATATGCTC.........................................................................................................................................................................................................................................................................................................................................................2011.001010000
.AATGCGGTGCGCCAAATATATGCTC.........................................................................................................................................................................................................................................................................................................................................................2511.001100000
.......................CTCATTATTGTGAGCTTTATGTTTGC..................................................................................................................................................................................................................................................................................................................................2611.001100000
..........................ATTATTGTGAGCTTTATGTTTGC..................................................................................................................................................................................................................................................................................................................................2311.001010000
.........................CATTATTGTGAGCTTTATGTT.....................................................................................................................................................................................................................................................................................................................................2111.001100000
.AATGCGGTGCGCCAAATATATGCT..........................................................................................................................................................................................................................................................................................................................................................2411.001100000
...........................TTATTGTGAGCTTTATGTT.....................................................................................................................................................................................................................................................................................................................................1911.001010000
......GGTGCGCCAAATATATGCT..........................................................................................................................................................................................................................................................................................................................................................1911.001100000
.........................................................................................................................................................................................................................................................................................A-TTGGT--ATTGTGTGGGTGT....................................................................1911.001100000
.........................CATTATTGTGAGCTTTATGT......................................................................................................................................................................................................................................................................................................................................2011.001000010
....................ATGCTCATTATTGTGAGCTTTATGTTTGC..................................................................................................................................................................................................................................................................................................................................2911.001010000
.....................................................................................................................................................................................................................................................................................CAGCA-TTGGT--ATTGTGTGGGTGTG...................................................................2411.001000010
droBip1
GAATGCGGTGCGCCAAGTATATGCTCATCATTGTGAGCTTTATGTTTGCGGTGAGTT---GA---TCCTCCAGG--------------------------------------------------------------------------------CCATTA-CGAACTCCGTGATTCACA--A-T---CCGCCATCTTGAGTCATTTTTCCTA--TTTCTGCGCGTTTC---ATTT------------TTATCAA--ATAGACCG--CAT-TTCTTATCAGCA-GTGGA--AT------TGTGTGGGTGTA-GGTTTTTGCTTTT--GT-TTTTTTGTGAATCATTTA---ACTTTTACGTATATCGCTGATSizeHit CountTotal NormTotal
No Reads
dp5
GCATGCGATGCGCTAAATATATGCTCATCATAGTGAGCTTTATGTTTGCGGTAAGTCCT-GCGGATCTTC--------------------------------------------------GCA--CTTTCCAT----GAATGAATCGCA-CCCTCCATGA-----ATCCATGAATCACA--AG--AGTCGCCATTTTGATTCGATTT-CATT--AGATTTCGCCTCCTTCCTTCATTATCATTATCATTATCACTCATTGAGTCCGCC--TGCTTATCAGCT-TTTGG--TTTTTCTTTGTATGGGTGTA------ATA-CCTTGTTT-TTTTTTGTGATTCATTAT---GTGCCTACGTAAGTC---GATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.CATGCGATGCGCTAAATATATGCT..........................................................................................................................................................................................................................................................................................................................................................2419.0090700002000
..ATGCGATGCGCTAAATATATGCT..........................................................................................................................................................................................................................................................................................................................................................2314.0040300001000
.........................CATCATAGTGAGCTTTATGTT.....................................................................................................................................................................................................................................................................................................................................2113.0030200001000
.........................CATCATAGTGAGCTTTATGTTTGC..................................................................................................................................................................................................................................................................................................................................2413.0030100002000
......GATGCGCTAAATATATGCT..........................................................................................................................................................................................................................................................................................................................................................1912.0020000200000
.........................CATCATAGTGAGCTTTATGTTTGCG.................................................................................................................................................................................................................................................................................................................................2512.0020200000000
................ATATATGCTCATCATAGTGAGC.............................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.CATGCGATGCGCTAAATATATG............................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..........CGCTAAATATATGCTCATCATAGTGA...............................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.........................CATCATAGTGAGCTTTATGT......................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.........................CATCATAGTGAGCTTTATGTTT....................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.CATGCGATGCGCTAAATAT...............................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
......GATGCGCTAAATATATGCTC.........................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
................................................................................................................................................................................................................................................................................CTTATCAGCT-TTTGG--TTTTTCTTT........................................................................2411.0010010000000
.......................CTCATCATAGTGAGCTTTATGTTTGCG.................................................................................................................................................................................................................................................................................................................................2711.0010100000000
............CTAAATATATGCTCATCATAGTGA...............................................................................................................................................................................................................................................................................................................................................2411.0010100000000
droPer2
GCATGCGATGCGCTAAATATATGCTCATCATAGTGAGCTTTATGTTTGCGGTAAGTCCT-GCGGATCTTC--------------------------------------------------GCA--CTTTCCAT----GAATGAATCGCA-CCCTCCATGA-----ATCCATGAATCACA--AG--AGTCGCCATTTTGATTCGATTT-CATT--AGATTTCGCCTCCTTCCTTCATTATCATTATCATTATCACTCATTGAGTCCGCC--TGCTTATCAGCT-TTTGG--TTTTTCTTTGTGTGGGTGTA------ATA-CCTTGTTT-TTTTTTGTGATTCATTAT---GTGCCTACGTAAGTC---GATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.CATGCGATGCGCTAAATATATG............................................................................................................................................................................................................................................................................................................................................................2213.003021000
.........................CATCATAGTGAGCTTTATGTTTGCG.................................................................................................................................................................................................................................................................................................................................2512.002010001
....GCGATGCGCTAAATATATGCTC.........................................................................................................................................................................................................................................................................................................................................................2211.001001000
.........................CATCATAGTGAGCTTTATGT......................................................................................................................................................................................................................................................................................................................................2011.001000001
..........CGCTAAATATATGCTCATCATAGTGAGCT............................................................................................................................................................................................................................................................................................................................................2911.001010000
.CATGCGATGCGCTAAATAT...............................................................................................................................................................................................................................................................................................................................................................1911.001010000
................ATATATGCTCATCATAGTGAG..............................................................................................................................................................................................................................................................................................................................................2111.001001000
droWil2
GCATGCGATGTGCCAAATATATGCTCATCATAGTGAGCTTTATGTTTGCGGTAAGTTTTCAAAGAGTTTT--------------TC----------------------------------AAAACATTTCCATTGTGGAAAGTATTGCA-AGGCTCCTGC---TCACCTATGAATCACACAAGA---TCGCCATTTTGGATTTTATA-ACAG--TTT----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................CATCATAGTGAGCTTTATGTT.....................................................................................................................................................................................................................................................................................................................................2113.00301200
......GATGTGCCAAATATATGCT..........................................................................................................................................................................................................................................................................................................................................................1912.00202000
..............................................................................................................................................................................TCACACAAGA---TCGCCATTTTG.............................................................................................................................................................................2111.00100010
.........................CATCATAGTGAGCTTTATGTTT....................................................................................................................................................................................................................................................................................................................................2211.00100100
..ATGCGATGTGCCAAATATATGCT..........................................................................................................................................................................................................................................................................................................................................................2311.00100010
...........GCCAAATATATGCTCATCATAGT.................................................................................................................................................................................................................................................................................................................................................2311.00100010
........................TCATCATAGTGAGCTTTAT........................................................................................................................................................................................................................................................................................................................................1911.00101000
........................TCATCATAGTGAGCTTTATGTT.....................................................................................................................................................................................................................................................................................................................................2211.00100010
.........................CATCATAGTGAGCTTTATGTTTGC..................................................................................................................................................................................................................................................................................................................................2411.00100100
..ATGCGATGTGCCAAATATAT.............................................................................................................................................................................................................................................................................................................................................................2011.00101000
..........................ATCATAGTGAGCTTTATGTTTGC..................................................................................................................................................................................................................................................................................................................................2311.00101000
droVir3
GAATGCGCTGCGCCAAATATATGCTCATCATAGTGAGCTTTATGTTCGCGGTGAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..ATGCGCTGCGCCAAATATATGCT..........................................................................................................................................................................................................................................................................................................................................................2315.005004000000000001000000000000000000000000000000000000000000000000
.........................CATCATAGTGAGCTTTATGTTCGC..................................................................................................................................................................................................................................................................................................................................2414.004001100000000000000000100000000100000000000000000000000000000000
..ATGCGCTGCGCCAAATATATG............................................................................................................................................................................................................................................................................................................................................................2113.003002000000000000100000000000000000000000000000000000000000000000
..ATGCGCTGCGCCAAATATATGCTC.........................................................................................................................................................................................................................................................................................................................................................2412.002001000000000000100000000000000000000000000000000000000000000000
.............CAAATATATGCTCATCATAGTGA...............................................................................................................................................................................................................................................................................................................................................2312.002002000000000000000000000000000000000000000000000000000000000000
..............AAATATATGCTCATCATAGT.................................................................................................................................................................................................................................................................................................................................................2012.002000000000000000000000010001000000000000000000000000000000000000
....GCGCTGCGCCAAATATATGCT..........................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
..ATGCGCTGCGCCAAATATAT.............................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..................ATATGCTCATCATAGTGAGCTTTAT........................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.........................CATCATAGTGAGCTTTATGTT.....................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000010000000000000000000000000000000000000000000
.........................CATCATAGTGAGCTTTATGTTCGCG.................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.........GCGCCAAATATATGCTCA........................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000010000000000000000000000000000000
.........................CATCATAGTGAGCTTTATGTTC....................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
....GCGCTGCGCCAAATATATGCTC.........................................................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
.........................CATCATAGTGAGCTTTATGT......................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...............AATATATGCTCATCATAGT.................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000010000000000000000000000000000000000000000
..........................ATCATAGTGAGCTTTATGTTCGC..................................................................................................................................................................................................................................................................................................................................2311.001000000000000001000000000000000000000000000000000000000000000000
........................TCATCATAGTGAGCTTTATGTTCG...................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.......................CTCATCATAGTGAGCTTTATGTTCG...................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
..................ATATGCTCATCATAGTGAGC.............................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
GAATGCGCTGCGCCAAATATATGCTCATCATAGTGAGCTTTATGTTTGCGGTAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...TGCGCTGCGCCAAATATATG............................................................................................................................................................................................................................................................................................................................................................2013.003300000
.AATGCGCTGCGCCAAATATATGCT..........................................................................................................................................................................................................................................................................................................................................................2412.002200000
.........................CATCATAGTGAGCTTTATGTT.....................................................................................................................................................................................................................................................................................................................................2112.002000002
..........................ATCATAGTGAGCTTTATGTT.....................................................................................................................................................................................................................................................................................................................................2012.002200000
...................TATGCTCATCATAGTGAGCT............................................................................................................................................................................................................................................................................................................................................2011.001100000
.......................CTCATCATAGTGAGCTTTAT........................................................................................................................................................................................................................................................................................................................................2011.001100000
..........................ATCATAGTGAGCTTTATGTTTGC..................................................................................................................................................................................................................................................................................................................................2311.001100000
.......................CTCATCATAGTGAGCTTTATGTT.....................................................................................................................................................................................................................................................................................................................................2311.001100000
.........................CATCATAGTGAGCTTTATGTTTGCG.................................................................................................................................................................................................................................................................................................................................2511.001000100
..ATGCGCTGCGCCAAATATATGCT..........................................................................................................................................................................................................................................................................................................................................................2311.001100000
GAATGCGCTGCGCCAAATATATG............................................................................................................................................................................................................................................................................................................................................................2311.001100000
.........................CATCATAGTGAGCTTTATGTTTGC..................................................................................................................................................................................................................................................................................................................................2411.001000001
.AATGCGCTGCGCCAAATATATG............................................................................................................................................................................................................................................................................................................................................................2211.001100000
.......................CTCATCATAGTGAGCTTTATGTTTGCG.................................................................................................................................................................................................................................................................................................................................2711.001100000
droGri2
GAATGCGCTGCGCCAAATATATGCTCATTATAGTGAGCTTTATGTTTGCGGTAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.AATGCGCTGCGCCAAATATATG............................................................................................................................................................................................................................................................................................................................................................2211.00110

Generated: 05/19/2015 at 12:00 AM