ID:

dsi_21635

 Coordinate:

3l:17515723-17515872 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CCACTTCGAAGGGCTGTAAATGGCAGGGGAAGACGGGGCACTTCCTGCGTGACAACAGGACAACAGCTGTCCGTTGCACCTGCTCCGCAGTGCAGTGAAGTGTGTAATTGATGGGGCCCATAATTTTATGCTCACGTTTAGGTTTAAGCACCGCTTACAAGGCCGAAAACTAACCGAATGTGTCCTTTTTTCAATTGCAGCTGTGCGTTTTGGACGCGTGCCGAAGCGCGAAAAGGCGCGTATCCTGGCG
**************************************************..((((.(((((.....)))))))))(((((((........))))....)))(((((((((.((((..((((....))))..(((((((.((((........((((...))))........))))))))))).))))...))))))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 SRR618934
dsim w501 ovaries
 M024
male body		 M053
female body
 SRR553487
NRT_0-2 hours eggs
.................................................................................................................................................................................................................TTGGACGCGTGCCGAAGCGC..................... 20 0 1 3.00 3 3 0 0 0 0
.........................................................................................................................................................................................................TGTGCGTTTTGGACGCGTGCCGAAGCG...................... 27 0 1 1.00 1 0 1 0 0 0
....................................................................................................................................................................................................GATGCTGTGCGTTTTGGACGC................................. 21 2 1 1.00 1 0 0 1 0 0
......................................................................................................................................................................................................GCCTGTGCGTTTTGGACGCGTGCCGAA......................... 27 2 1 1.00 1 0 0 0 1 0
.......................................................................................................................................................................................................GCTGTGCGTTTTGGACGC................................. 18 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................................................AACCGCGAAAAGGCGC........... 16 1 7 0.14 1 0 1 0 0 0
.........................GGGGGAGACGGGGCA.................................................................................................................................................................................................................. 15 1 15 0.07 1 0 0 0 0 1

Anti-sense strand reads

GGTGAAGCTTCCCGACATTTACCGTCCCCTTCTGCCCCGTGAAGGACGCACTGTTGTCCTGTTGTCGACAGGCAACGTGGACGAGGCGTCACGTCACTTCACACATTAACTACCCCGGGTATTAAAATACGAGTGCAAATCCAAATTCGTGGCGAATGTTCCGGCTTTTGATTGGCTTACACAGGAAAAAAGTTAACGTCGACACGCAAAACCTGCGCACGGCTTCGCGCTTTTCCGCGCATAGGACCGC
**************************************************..((((.(((((.....)))))))))(((((((........))))....)))(((((((((.((((..((((....))))..(((((((.((((........((((...))))........))))))))))).))))...))))))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 O001
Testis
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M053
female body
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
........................................................................................................................................................................................................................................TTCCGCGCATAGGACCGC 18 0 1 1.00 1 0 1 0 0 0 0 0
...................................................................................................................................................CGGGGCAAATGTTCCGGCTTTTGTT.............................................................................. 25 3 3 0.33 1 0 0 1 0 0 0 0
...................................................................................................................................................CGAGGCAAATGTTCCGGCTTT.................................................................................. 21 2 3 0.33 1 0 0 0 1 0 0 0
........................................................................................................................................................CAAATGTTCCGGCTTTTGT............................................................................... 19 2 3 0.33 1 1 0 0 0 0 0 0
......................................................................................................................................................GGCGAATATTCCGGCTTTTTGT.............................................................................. 22 3 4 0.25 1 1 0 0 0 0 0 0
.......................................................................................................................................................GCAAATGTTCCGGCTTT.................................................................................. 17 1 4 0.25 1 1 0 0 0 0 0 0
......................................................................................................................................................GGCAAATGTTACGGCTTTT................................................................................. 19 2 7 0.14 1 0 0 0 0 1 0 0
.......................................................................................................................................................GCAAATGTTCCGGCT.................................................................................... 15 1 8 0.13 1 1 0 0 0 0 0 0
........................................................................................................................................................CAAATGTTCCGGCTTT.................................................................................. 16 1 10 0.10 1 1 0 0 0 0 0 0
....................ACCATCCCCTACTGCC...................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 1
........................................................................................................................................................................TGACTGGCTTAAACAGGGA............................................................... 19 3 20 0.05 1 0 0 0 0 1 0 0
..........................................................................................................................................................................ATTGGTTTAAACAGGAATAA............................................................ 20 3 20 0.05 1 0 0 1 0 0 0 0
.............................................................................TGGACAAGGCGTCATG............................................................................................................................................................. 16 2 20 0.05 1 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:17515673-17515922 - dsi_21635 CCACTTCGAAGGGCTGTAAATGG------------------------------------------------------------------------------------------C----------------AGGG-GAAGACG-------------GGGCACTTCCTGCGTGACAA--C---------------------------------------AGGACAACAGCTGTC-------------------------------C--GTTGCACCTGCT--CCGCA---------------GTGCAGTGAAGTGTGTAATTGATGGG------------------G------------------------------------------------------------------CCC-------AT-AAT-----TTTATGCTC----------ACG------------TTTAGG-TT----------TAAGCACC------GCTT---------ACAAGGCCGAAA-----------ACT------AACCG-AAT----------------GTGTC---C-----------TTT----TTTCAATTGCAGCTGTGCGTTTTGGACGCGTGCCGAAGCGCGA-AAAGGCGCGTATCCTGGCG
droSec2 scaffold_89:56123-56372 - CCACTTCGAAGGGCTGTAAATGG------------------------------------------------------------------------------------------C----------------AGGG-GAAGACG-------------GGGCACTTCCTGCGTGACAA--C---------------------------------------AGGACAACAGCTGTC-------------------------------C--GTTGCACCTGCT--CCGCA--------A-------TGCAGTGAAGTGTGTAATTGATGGG------------------G------------------------------------------------------------------CCC-------AT-AAT-----TTTATGCTC----------ACG------------TTTAGG-TT----------TAAGCACC------GCTT---------ACAAGGCCGAAA-----------ACT------AACCG-AAT----------------GTGTC---C-----------TCT----TTCCAATTGCAGCTGTGCGTTTTGGACGCGTGCCGAAGCGCGA-AAAGGCGCGTATCCTGGCG
dm3 chr3L:17952671-17952922 - CCACTTCGAAGGGCTGTAAATATGG----------------------------------------------------------------------------------------C----------------AGGG-GAAGACG-------------GGGCACTTCCTGCGTGACAA--C---------------------------------------AGGACAACAGCTGTA-------------------------------C--GTTGCACCTGCT--ACGCA--------A-------TGCAGTGAAGTGTGTAATTGATGGG------------------G------------------------------------------------------------------CCC-------AT-AAT-----TTTATGCTC----------AAG------------TTTAGG-TT----------TAAGCACC------GCTT---------ACAAGGCCGAAA-----------ACT------AACCG-AAT----------------GTGTC---C-----------TTT----TTCCAATTGCAGCTGTGCGTTTTGGACGCGTGCCGAAGCGCGA-AAAGGCGCGTATCCTGGCG
droEre2 scaffold_4784:15928150-15928410 + CCACTTCGAAGGGCTGTAAATTG------------------------------------------------------------------------------------------C----------------AGGG-GCAAACG-------------GGGCACTTCCTGCGTGACAA--CGGGAGAT--------CGGGAGATC-------GGGAGAACAGGACAACAGCTGTC-------------------------------C--GTTGCACCTGCT--CCGCA--------A-------TGCAGTGAAGTGTGTAATTGATGGG-------------------------------------------------------------------------------------CCC-------AT-AAT-----T--------------------G------------TTTAGG-TT----------TAAGCACC------GCTT---------ACAAGGCCGAAA-----------ACT------AACCG-AAT----------------GTCTC---C-------------T----TTTTCATTGCAGCTGTGCGTTTTGGACGCGTGCCGAAGCGCGA-AAAGGCGCGTATCCTGGCG
droYak3 3L:16098857-16099123 + CCACTTCGAAGGGCTGTGAGTTG------------------------------------------------------------------------------------------C----------------AGGG-GCAGACG-------------GGGAACTTCCTGCGTGACAA--CAGGACAG--------C-----------------------AGGACAACAGCTGGT-------------------------------C--GTTGCACCTGCT--GCACA--------GTGCA--GCGCAGTGAAGTGTGTAATTGATGGG------------------G------------------------------------------------------------------CAC-------AT-AAT-----TGTATGCTC----------AAG------------TCTAGG-TT----------TAAGCACC------GCTT---------ACAAGGCCGAAA-----------ACT------AAACG-AAT----------------ATGTC---C-------TCTTTTT----TTCCCATTGCAGCTGTGCGTTTTGGACGCGTGCCGAAGCGCGA-AAAGGCGCGCATCCTGGCG
droEug1 scf7180000409471:1607979-1608247 + CCACTTCGAAGGGCAGTAAATTG------------------------------------------------------------------------------CAA---------------------------GGGGGAATGAG-------------GGGCACTTCCTGCGTGACAA--C---------------------------------------AGGACACCAGCTGTC-------------------------------C--GTTGCACCTGCT--CTGC----------------GTGCACTGAAGTGTGTAATTGAAGGG------------------GT-----------------G-----------------------------------------------CCC-------TT-AAT-----TTTATGCTC----------AAGTTTAAGTTTAAGTTTAAG-TT----------TAAGTACC------GCTT---------ACAAGGCCGAAA-----------ACT------AACCG-AAA----------------ATGCC---A-------TATTTTT----GTATCATTGCAGCTGTGCGTTTTGGACGCGTGCCGAAGCGCGA-AAAGGCGCGTATCCTGGCG
droBia1 scf7180000302193:1264684-1264931 - CCACTTCGAAGGGCAGTAAATTG------------------------------------------------------------------------------------------C----------------AGGG-G--GACG-------------GTGCACTTCCTGCGTGACAA--C---------------------------------------AGGACAACAGCTGTC-------------------------------C--GCTGCACCTGCT--CTGC----------------GTGCAGTGAAGTGTGCAATTGATGGG------------------GC-----------------------------------------------------------------CCC-------AT-AAT-----TTTATGCTC----------AAC------------TCCGAG-TT----------TAAGCACC------GCTC---------ACAAGGCCGAAA-----------ACT------AACCG-AAA----------------CCGC--------------TCTTC----TTCCCATTGCAGCTGTGCGTTTTGGACGCGTGCCGAAGCGCGA-AAAGGCGCGCATCCTGGCG
droTak1 scf7180000415794:207561-207840 - CCACTTCGAAGGGCAGTAAATTG------------------------------------------------------------------------------------------C----------------AGGG-GAAAACGAGGAAAGGGGCAGGGGCACTTCCTGCGTGACAA--C---------------------------------------AGGACAACAGCTGTC-------------------------------C--GTTGCACCTGCT--CTGC----------------GTGCAGTGAAGTGTGCAATTGATGGG------------------C------------------------------------------------------------------CCC-------AT-AAT-----TTTATGCTC----------ATGTTTGGGCTGAAGTTTAAG-TT----------TAAGCACC------GCTT---------ACAAGGCCGAAA-----------ACT------AACCAGAA-----------------ATATCCT-C-------TTATTTT----TTCCCATTGCAGCTGTGCGTTTTGGACGCGTGCCGAAGCGCGA-AAAGGCGCGCATCCTGGCG
droEle1 scf7180000490993:859416-859685 - CCACTTCGAAGGGCAGTAAATTG------------------------------------------------------------------------------------------C----------------AGGGGGAAAACT-------------GGGCACTTCCTGCGTGACAA--CAGGACAA--------CT-------------------------GCAACAGCTGTA-------------------------------T--TTTGCACCTGCTATCTGC----------------GTGCAGTGAAGTGTGTAATTGATGGG------------------GA-----------------------------------------------------------------ACC-------AT-AAT-----TTTATGCTC----------AAG------------TTTAAG-TT----------TAAGCACCCATTTCGTTT---------ACAAGGCCAAAA-----------ACT------AACCG-AAACTTC----------CGA---------------CGCTTCT----TTGCCATTGCAGCTGTGCGTTTTGGACGCGTGCCGAAGCGCGA-AAAGGCGCGTATCCTGGCG
droRho1 scf7180000780225:12899-13050 - CCACTTCGAAGGGCAGTAAATTG------------------------------------------------------------------------------------------C----------------AGGG-GAAAACG-------------GACAACTTCCTGCGTGACAA--CAGGACAA--------CG-------------------------GCAACAGATGTC-------------------------------T--GTTGCACCTGTTTTCTGC----------------GTGCAATGAAGTGTGTAATTGATGGG------------------GA-----------------------------------------------------------------ACC-------AT-AAT-----TTTATGCTC----------AAG------------TTTAAG-TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454107:1547107-1547425 - CCACTTCGAAGGGCAGCAAATTG------------------------------------------------------------------------------CAGGGGAAATGGC----------------AGGG-GAAAACG-------------GGGTACTTCCTGCGTGACAA--CAGGACAA--------CTGGGAACTGGGAACTGAGAAAACAGGACAACAGCTGTC-------------------------------C--GTTGCACCTGCCATCTGC----------------GTGCACTGAAGTGTGTAATTGATGGG------------------G------------------------------------------------------------------CCC-------GT-AAT-----TTTATGCTC----------TAC------------TTTAGG-TT----------TAAGCACC------GCTC---------GCAAGGCCGAAA-----------ACA------CAACG-AAATTTCCAACCGCTTATAA---CTC-TTTTTT--TCCCC---ATTCTTCCATTGCAGCTGTGCGTTTTGGTCGCGTGCCGAAGCGCGA-AAAAGCGCGTATCCTGGCG
droKik1 scf7180000302626:373246-373497 - CCACTTTGAAGGGCACTCT-----------------------------------------------------------------------------------------------------------------GG-GTAAAGG-------------GGGAACTTCCTGCGTGACAA--CAGGACAA--------CC----------------------GAAACAACAGCTGTC-------------------------------C-TCTTGCACCTGCT--G--T----------------ATGCACTCAAGTGTGTAATTGATGGG------------------C--------------------------------------------------------------------C-------TTAATT-----TTTATGCCT----------AAA------------TATATA-TG----------TAA-TATG------ACTT---------GCAAGGTT---------------ACT------AACTTGG----------------C-T--TC---CTT-----TTTTTTCGTTCCCTTCATTGCAGCTGTGCGTTTTGGACGCGTGCCGAAGCGCGA-GAAGGCGCGCATTTTGGCC
droAna3 scaffold_13337:5251584-5251792 + CCACTTCCAAGGGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGACAACAGCTGTC-------------------------------CTGCCTGCACCTGCCACCTGCCACTTGCCACT---T-GCCTCATGAAATGTGTAATTGATGGG----------T-TTCGGGG--------------------------------------------------------------------------------------------------------------------------TCCAG-TT----------GAAACACC------CTTT---------ACAAGGCCA-TA-----------CTT------AACTC-CTT----------------TTT-------------TTCTCTT----CTCTACTTGCAGCTGTGCGTTTTGGACGCGTGCCGAAGCGCGA-AAAGGCGCGCATCCTTGCC
droBip1 scf7180000396371:582489-582708 + CCACTTCCAAGGACTGTAAAATA------------------------------------------------------------------------------------------------------------AGA-------G-------------CACTACTTCCTGCGTGACA-------------------------------------------------ACAGCTGTC-------------------------------C--TGTGCACCTGCC--AC-------------------------------TGTAATTGATGGG------------------TC-----------------------------------------------------------------TCC-------CC-ACT-CCTCTCTCTTCTC----------TCT------------TTTAAG-TT----------GAAACACC------CTTT---------ACAAGGCCAT-------------ACT------TAAC---------------------A---CCC-C-------TTTTTTT----ATCTTTTTGCAGCTGTGCGTTTTGGACGCGTGCCGAAACGCGA-AAAGGCGCGCATCCTGGCC
dp5 XR_group6:10810560-10810876 - CCACTTTCAAGGGCACTAAATTACACAAGGGACGAGGGGACGATGGGACGAGGGTATCGGGGGGATGGGGG---------------------------------------------------------------------GG-------------GGGCACTTCCTGCGTGACAAGCC---------------------------------------AGGACAACAGCTGTT-------------------------------GCCCGTGCACCTGCT--CTCCA--------ATGAAGGCAGCAATGAAGCGTGTAATTGATGCACCGAAAGGGGCAGGGGG-GG-----------------------------------------------------------------ACC-------CT-ACC---------------------------------------TTTAAG-TT----------GAACCAAC------GATT---------ACCTGCC----------------ACT------AACCTCAATCTTC----------CCC---CTCT-CTCTCTCTCTCTCT----CTCTCGTTGCAGCTGTGCGCTTTGGTCGCGTGCCGAAGCGAGA-GAAGGCGCGCATCCTGGCC
droPer2 scaffold_20:720931-721209 - CCACTTTCAAGGGCACTAAATTACACAAGGGAC----------------GA---------------------------------------------------------------------------------GG-GTAT-CG---------G--GGGGCACTTCCTGCGTGACAAGCC---------------------------------------AGGACAACAGCTGTT-------------------------------GCCCGTGCACCTGCT--CTCCA--------AC---GGCAGCAATGAAGCGTGTAATTGATGCACCGAAAGGGGT-GGGGG-GG-----------------------------------------------------------------ACC-------CT-ACC---------------------------------------TTTAAG-TT----------GAACCAAC------GATT---------ACCTGCC----------------ACT------AACCTCAATCTTC----------CCC---CCT-C-------TCTCTCT----CTCTCGTTGCAGCTGTGCGCTTTGGTCGCGTGCCGAAGCGAGAGAAAGGCGCGCATCCTGGCC
droWil2 scf2_1100000004768:2553831-2554140 + dwi_2133 AAAAACGAAAAAAAAGA-----------------------------------------------------------------------------------------------------------------------AAAACT------C-AA--AACTCACTTCCTGCGTGACAA--AGAAACAA--------AC--------------AACA-GACAGGACAACAGCTGCTGTTGCTGCTGTTGCTTGTCCCTTTATTTTCTT--GTTGCACCTGCT--GT-------------------------------TGTAATTA-------------------------------------------------CAGAC--------GATGATGAAGATGAAGATGATGATGATGATGATGATTGTT-AC-------------------------ATA------------TGTACCTTGTATATATAAA-CTGTATT------TCTT---------TAAACAAAAAGT-----------ACT------AACCGGAAT----------------GTAT------------TTTTTTT----TTGTTTTTGCAGCTGTGCGATTTGGACGCGTGCCCAAGCGAGA-GAAGGCGCGCATTTTGGCC
droVir3 scaffold_13049:21220257-21220591 + dvi_20882 CCAGTTGGAAGGGCAGCGTCTGT----------------------------------CGAGTGGAGGGCGCGGGGCACGGGGCGTTGCTGGCCATAAATTACAGGGCCAGCGCCTGTGTACAGTGAGCTCTC-T-GTACAGG----TAT-GA--CAAGCGCTTCCTGCGTGACAAA-C---------------------------------------AGAACAACAGCTGCT-------------------------------C--CTTGCACCTGTT--CGC-----------------------CGAAGTGTGACACCTTTGTA------------------TA------------------------------TACATAAG------------------------------------------------C--------TCCTACATATATA------------TATATA-TA----------TA---------------TATAAGACTTGTAG--------------CTGTGCGTGTTATTAA------TTTGC----------CCC---CTCT--TCTGC-TTCTTTC----CTCCCGTTGCAGCTGTGCGCTTTGGTCGCGTGCCCAAGCGAGA-GAAGGCGCGCATTTTGGCC
droMoj3 scaffold_6680:15616708-15617027 + dmo_2507 CCAGTTCGAAGGGCTGTCCATA--------------------------------------------------------------------------AATTACAGTT---GTGCCT--GTACAGTGAGCTCACGC-ACACACG--------GA--CAAGAACTTCCTGCGTGACAA--ACG-------------------------------------GCGGCAACAGCTGCG-------------------------------C--CTTGCACCTGCT-------------------------CACTGAAGTGTGAGGC-------------------------GGACAGACAACAAAAAATTGCACTTGCATACATACATATA------------------------------------------------C--------ACATACATACATA------------TATACA-TACATATATAAATATATACA------TAT--------------------ATGCTCATCTGAATATATTGTTAA------TTTTG----------CAA---CTC---------TTTTTCTG---TCTACTTTGCAGCTGTTCGCTTTGGTCGCGTGCCGAAGCGCGA-AAAGGCGCGTATTTTGGCC
droGri2 scaffold_15110:22433604-22433834 - CCAGTTTAAAGGGCTGCCA-----------------------------------------------------------------------------------------------------------------GG-CTACAGT-------------AAACACTCGCTATGCGGGT--------CATCGTCAGCTGTGCAGCTT-------T-------------GCA-----G-------------------------------C--TTTGCACCTGTT--GTT-------------------------------------------------------------G------------------------------------------------------------------CTG------------TTTTTTTCTCTTCTTTCTTGCA-------------------TTAA--------------TTTGTACA------TGTT---------GCAAGGCCTAAA-----------CAA-TTATTAAG------TCCG----------CAATT-------------TTTTCTT----CTTTATTTTTAGCTGTGCGTTTTGGTCGCGTGCCGAAGCGAGA-AAAGGCGCGCATTTTGGCC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CCACTTCGAAGGGCTGTAAATGG------------------------------------------------------------------------------------------C----------------AGGG-GAAGACG-------------GGGCACTTCCTGCGTGACAA--C---------------------------------------AGGACAACAGCTGTC-------------------------------C--GTTGCACCTGCT--CCGCA---------------GTGCAGTGAAGTGTGTAATTGATGGG------------------G------------------------------------------------------------------CCC-------AT-AAT-----TTTATGCTC----------ACG------------TTTAGG-TT----------TAAGCACC------GCTT---------ACAAGGCCGAAA-----------ACT------AACCG-AAT----------------GTGTC---C-----------TTT----TTTCAATTGCAGCTGTGCGTTTTGGACGCGTGCCGAAGCGCGA-AAAGGCGCGTATCCTGGCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGACGCGTGCCGAAGCGC......................2013.00300300000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCGTTTTGGACGCGTGCCGAAGCG.......................2711.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTGCGTTTTGGACGC..................................1811.00100100000000000000
droSec2
CCACTTCGAAGGGCTGTAAATGG------------------------------------------------------------------------------------------C----------------AGGG-GAAGACG-------------GGGCACTTCCTGCGTGACAA--C---------------------------------------AGGACAACAGCTGTC-------------------------------C--GTTGCACCTGCT--CCGCA--------A-------TGCAGTGAAGTGTGTAATTGATGGG------------------G------------------------------------------------------------------CCC-------AT-AAT-----TTTATGCTC----------ACG------------TTTAGG-TT----------TAAGCACC------GCTT---------ACAAGGCCGAAA-----------ACT------AACCG-AAT----------------GTGTC---C-----------TCT----TTCCAATTGCAGCTGTGCGTTTTGGACGCGTGCCGAAGCGCGA-AAAGGCGCGTATCCTGGCGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................AATGG------------------------------------------------------------------------------------------C----------------AGGG-GAAGACG-------------GGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGAAGCGCGA-AAAGGCGCGTA........2311.0010001
............................................................................................................................................................................................................................................................................TGCACCTGCT--CCGCA--------A-------TGCAGTGAAGT...........................................................................................................................................................................................................................................................................................................................................................2711.0010010
............GCTGTAAATGG------------------------------------------------------------------------------------------C----------------AGGG-GAAGACG-------------G.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---C-----------TCT----TTCCAATTGCAGT..................................................1830.3310010
dm3
CCACTTCGAAGGGCTGTAAATATGG----------------------------------------------------------------------------------------C----------------AGGG-GAAGACG-------------GGGCACTTCCTGCGTGACAA--C---------------------------------------AGGACAACAGCTGTA-------------------------------C--GTTGCACCTGCT--ACGCA--------A-------TGCAGTGAAGTGTGTAATTGATGGG------------------G------------------------------------------------------------------CCC-------AT-AAT-----TTTATGCTC----------AAG------------TTTAGG-TT----------TAAGCACC------GCTT---------ACAAGGCCGAAA-----------ACT------AACCG-AAT----------------GTGTC---C-----------TTT----TTCCAATTGCAGCTGTGCGTTTTGGACGCGTGCCGAAGCGCGA-AAAGGCGCGTATCCTGGCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................TAAATATGG----------------------------------------------------------------------------------------C----------------AGGG-GAAGATA-------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000030000001000000000000000000000000000000
................TAAATATGG----------------------------------------------------------------------------------------C----------------AGGG-GAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGCGTTTTGGACGCGTGCCGAA..........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------AACCG-AAT----------------GTGTC---C-----------TTT----TT.............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGCGTGCCGAAGCGCGA-AAA................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCACC------GCTT---------ACAAGGCCGA.........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGAAGCGCGA-AAAGGCGCGTATCCTGG..3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGGACGCGTGCCGAAGC........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGTTTTGGACGCGTGCCGAAG.........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT----------------GTGTC---C-----------TTT----TTCCAATTGCAG...................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ATGG----------------------------------------------------------------------------------------C----------------AGGG-GAAGACG-------------GC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................AGTGAAGTGTGTAATTGATGGG------------------G------------------------------------------------------------------CCC-------..............................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTTTGGACGCGTGCCGAAGC........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCG-AAT----------------GTGTC---C-----------TTT----TTCC...........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGACGCGTGCCGAAGCGCGA-AA.................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................GCGTGACAA--C---------------------------------------AGGACAACAGCTGTA-------------------------------C--G........................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.CACTTCGAAGGGCTGTAAATAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGAAGCGCGA-AAAGGCGCGTA........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.........................................................................................................................................................................................................................................................................................CGCA--------A-------TGCAGTGAAGTGTGTAA.....................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..ACTTCGAAGGGCTGTAAATATGG----------------------------------------------------------------------------------------C----------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGACGCGTGCCGAAGCGCGA-A..................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGACGCGTGCCGAAGCGCGA-AAA................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................GCA--------A-------TGCAGTGAAGTGTGTAATTG..................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................CT--ACGCA--------A-------TGCAGTGAAGTGTG........................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGACGCGTGCCGAAGCGCGA-AAAGGC.............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT----------------GTGTC---C-----------TTT----TTCCAATTG......................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGAAGCGCGA-AAAGG..............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGAAA-----------ACT------AACCG-AAT----------------GTGT......................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG-AAT----------------GTGTC---C-----------TTT----TTCCAATTG......................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-AAT----------------GTGTC---C-----------TTT----TTCCAATTGCAG...................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGGCCGAAA-----------ACT------AACCG-.............................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT----------------GTGTC---C-----------TTT----TTCCAATTGC.....................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTTTTGGACGCGTGCCG............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGACGCGTGCCGAAGC........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................AACAGCTGTA-------------------------------C--GTTGCAC..................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACGCGTGCCGAAGCGCGA-AA.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGA-AAAGGCGCGTATCCT....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TAAATATGG----------------------------------------------------------------------------------------C----------------AGGG-GAAGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGCGCGA-AAAGGCGCGTATC......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------TTTAGG-TT----------TAAGCACC------GCT.............................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGCGTTTTGGACGCGTGC..............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................GTGACAA--C---------------------------------------AGGACAACAGCTGTA-------------------------------C--GTTG.....................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGCGCGTATCCTGAT.1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCG-AAT----------------GTGTC---C-----------TTT----TTCCAATTG......................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA-AAAGGCGCGTATCCTGGCG2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT----------------GTGTC---C-----------TTT----TTCCAATTGCA....................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACGCGTGCCGAAGCGC......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
............................................................................................................................................................................CAA--C---------------------------------------AGGACAACAGCTGTA-------------------------------C--G........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGG-TT----------TAAGCACC------GCTT---------ACAAGGCCG..........................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGACGCGTGCCGAAGCGCGA-AAA................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................C----------------AGGG-GAAGACG-------------GGGCACTTCCTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCTGTGCGTTTTGGAA....................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC---C-----------TTT----TTCCAATTGCAG...................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GG-TT----------TAAGCACC------GCTT---------ACAAGGCCGA.........................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CCACTTCGAAGGGCTGTAAATTG------------------------------------------------------------------------------------------C----------------AGGG-GCAAACG-------------GGGCACTTCCTGCGTGACAA--CGGGAGAT--------CGGGAGATC-------GGGAGAACAGGACAACAGCTGTC-------------------------------C--GTTGCACCTGCT--CCGCA--------A-------TGCAGTGAAGTGTGTAATTGATGGG-------------------------------------------------------------------------------------CCC-------AT-AAT-----T--------------------G------------TTTAGG-TT----------TAAGCACC------GCTT---------ACAAGGCCGAAA-----------ACT------AACCG-AAT----------------GTCTC---C-------------T----TTTTCATTGCAGCTGTGCGTTTTGGACGCGTGCCGAAGCGCGA-AAAGGCGCGTATCCTGGCGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGCGTTTTGGACGCGTGCCGAA..........................2511.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCGTTTTGGACGCGTGCCGAAG.........................2511.0010000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AAAGGCGCGTATCCTGGC.1911.0010100000
droYak3
CCACTTCGAAGGGCTGTGAGTTG------------------------------------------------------------------------------------------C----------------AGGG-GCAGACG-------------GGGAACTTCCTGCGTGACAA--CAGGACAG--------C-----------------------AGGACAACAGCTGGT-------------------------------C--GTTGCACCTGCT--GCACA--------GTGCA--GCGCAGTGAAGTGTGTAATTGATGGG------------------G------------------------------------------------------------------CAC-------AT-AAT-----TGTATGCTC----------AAG------------TCTAGG-TT----------TAAGCACC------GCTT---------ACAAGGCCGAAA-----------ACT------AAACG-AAT----------------ATGTC---C-------TCTTTTT----TTCCCATTGCAGCTGTGCGTTTTGGACGCGTGCCGAAGCGCGA-AAAGGCGCGCATCCTGGCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................................................................A--------GTGCA--GCGCAGTGAAGTGTGTA......................................................................................................................................................................................................................................................................................................................................................2311.00100010000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTTTTGGACGCGTGCCG............................1911.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGACGCGTGCCGAAGCGCG.....................2211.00100010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT----TTCCCATTGCAGCTGTGC.............................................2111.00100100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGCGCGA-AAAGGCGCGCATCCTGGC.2811.00100100000000
droEug1
CCACTTCGAAGGGCAGTAAATTG------------------------------------------------------------------------------CAA---------------------------GGGGGAATGAG-------------GGGCACTTCCTGCGTGACAA--C---------------------------------------AGGACACCAGCTGTC-------------------------------C--GTTGCACCTGCT--CTGC----------------GTGCACTGAAGTGTGTAATTGAAGGG------------------GT-----------------G-----------------------------------------------CCC-------TT-AAT-----TTTATGCTC----------AAGTTTAAGTTTAAGTTTAAG-TT----------TAAGTACC------GCTT---------ACAAGGCCGAAA-----------ACT------AACCG-AAA----------------ATGCC---A-------TATTTTT----GTATCATTGCAGCTGTGCGTTTTGGACGCGTGCCGAAGCGCGA-AAAGGCGCGTATCCTGGCGSizeHit CountTotal NormTotal
No Reads
droBia1
CCACTTCGAAGGGCAGTAAATTG------------------------------------------------------------------------------------------C----------------AGGG-G--GACG-------------GTGCACTTCCTGCGTGACAA--C---------------------------------------AGGACAACAGCTGTC-------------------------------C--GCTGCACCTGCT--CTGC----------------GTGCAGTGAAGTGTGCAATTGATGGG------------------GC-----------------------------------------------------------------CCC-------AT-AAT-----TTTATGCTC----------AAC------------TCCGAG-TT----------TAAGCACC------GCTC---------ACAAGGCCGAAA-----------ACT------AACCG-AAA----------------CCGC--------------TCTTC----TTCCCATTGCAGCTGTGCGTTTTGGACGCGTGCCGAAGCGCGA-AAAGGCGCGCATCCTGGCGSizeHit CountTotal NormTotal
No Reads
droTak1
CCACTTCGAAGGGCAGTAAATTG------------------------------------------------------------------------------------------C----------------AGGG-GAAAACGAGGAAAGGGGCAGGGGCACTTCCTGCGTGACAA--C---------------------------------------AGGACAACAGCTGTC-------------------------------C--GTTGCACCTGCT--CTGC----------------GTGCAGTGAAGTGTGCAATTGATGGG------------------C------------------------------------------------------------------CCC-------AT-AAT-----TTTATGCTC----------ATGTTTGGGCTGAAGTTTAAG-TT----------TAAGCACC------GCTT---------ACAAGGCCGAAA-----------ACT------AACCAGAA-----------------ATATCCT-C-------TTATTTT----TTCCCATTGCAGCTGTGCGTTTTGGACGCGTGCCGAAGCGCGA-AAAGGCGCGCATCCTGGCGSizeHit CountTotal NormTotal
No Reads
droEle1
CCACTTCGAAGGGCAGTAAATTG------------------------------------------------------------------------------------------C----------------AGGGGGAAAACT-------------GGGCACTTCCTGCGTGACAA--CAGGACAA--------CT-------------------------GCAACAGCTGTA-------------------------------T--TTTGCACCTGCTATCTGC----------------GTGCAGTGAAGTGTGTAATTGATGGG------------------GA-----------------------------------------------------------------ACC-------AT-AAT-----TTTATGCTC----------AAG------------TTTAAG-TT----------TAAGCACCCATTTCGTTT---------ACAAGGCCAAAA-----------ACT------AACCG-AAACTTC----------CGA---------------CGCTTCT----TTGCCATTGCAGCTGTGCGTTTTGGACGCGTGCCGAAGCGCGA-AAAGGCGCGTATCCTGGCGSizeHit CountTotal NormTotal
No Reads
droRho1
CCACTTCGAAGGGCAGTAAATTG------------------------------------------------------------------------------------------C----------------AGGG-GAAAACG-------------GACAACTTCCTGCGTGACAA--CAGGACAA--------CG-------------------------GCAACAGATGTC-------------------------------T--GTTGCACCTGTTTTCTGC----------------GTGCAATGAAGTGTGTAATTGATGGG------------------GA-----------------------------------------------------------------ACC-------AT-AAT-----TTTATGCTC----------AAG------------TTTAAG-TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CCACTTCGAAGGGCAGCAAATTG------------------------------------------------------------------------------CAGGGGAAATGGC----------------AGGG-GAAAACG-------------GGGTACTTCCTGCGTGACAA--CAGGACAA--------CTGGGAACTGGGAACTGAGAAAACAGGACAACAGCTGTC-------------------------------C--GTTGCACCTGCCATCTGC----------------GTGCACTGAAGTGTGTAATTGATGGG------------------G------------------------------------------------------------------CCC-------GT-AAT-----TTTATGCTC----------TAC------------TTTAGG-TT----------TAAGCACC------GCTC---------GCAAGGCCGAAA-----------ACA------CAACG-AAATTTCCAACCGCTTATAA---CTC-TTTTTT--TCCCC---ATTCTTCCATTGCAGCTGTGCGTTTTGGTCGCGTGCCGAAGCGCGA-AAAAGCGCGTATCCTGGCGSizeHit CountTotal NormTotal
No Reads
droKik1
CCACTTTGAAGGGCACTCT-----------------------------------------------------------------------------------------------------------------GG-GTAAAGG-------------GGGAACTTCCTGCGTGACAA--CAGGACAA--------CC----------------------GAAACAACAGCTGTC-------------------------------C-TCTTGCACCTGCT--G--T----------------ATGCACTCAAGTGTGTAATTGATGGG------------------C--------------------------------------------------------------------C-------TTAATT-----TTTATGCCT----------AAA------------TATATA-TG----------TAA-TATG------ACTT---------GCAAGGTT---------------ACT------AACTTGG----------------C-T--TC---CTT-----TTTTTTCGTTCCCTTCATTGCAGCTGTGCGTTTTGGACGCGTGCCGAAGCGCGA-GAAGGCGCGCATTTTGGCCSizeHit CountTotal NormTotal
No Reads
droAna3
CCACTTCCAAGGGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGACAACAGCTGTC-------------------------------CTGCCTGCACCTGCCACCTGCCACTTGCCACT---T-GCCTCATGAAATGTGTAATTGATGGG----------T-TTCGGGG--------------------------------------------------------------------------------------------------------------------------TCCAG-TT----------GAAACACC------CTTT---------ACAAGGCCA-TA-----------CTT------AACTC-CTT----------------TTT-------------TTCTCTT----CTCTACTTGCAGCTGTGCGTTTTGGACGCGTGCCGAAGCGCGA-AAAGGCGCGCATCCTTGCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCGAAGCGCGA-AAAGG..............1911.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGGACGCGTGCCGAA..........................1911.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACGCGTGCCGAAGCGCGA-AAAGGC.............2711.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGCGTGCCGAAGCGCGA-AAAGGCGCGC.........2911.001010000
droBip1
CCACTTCCAAGGACTGTAAAATA------------------------------------------------------------------------------------------------------------AGA-------G-------------CACTACTTCCTGCGTGACA-------------------------------------------------ACAGCTGTC-------------------------------C--TGTGCACCTGCC--AC-------------------------------TGTAATTGATGGG------------------TC-----------------------------------------------------------------TCC-------CC-ACT-CCTCTCTCTTCTC----------TCT------------TTTAAG-TT----------GAAACACC------CTTT---------ACAAGGCCAT-------------ACT------TAAC---------------------A---CCC-C-------TTTTTTT----ATCTTTTTGCAGCTGTGCGTTTTGGACGCGTGCCGAAACGCGA-AAAGGCGCGCATCCTGGCCSizeHit CountTotal NormTotal
No Reads
dp5
CCACTTTCAAGGGCACTAAATTACACAAGGGACGAGGGGACGATGGGACGAGGGTATCGGGGGGATGGGGG---------------------------------------------------------------------GG-------------GGGCACTTCCTGCGTGACAAGCC---------------------------------------AGGACAACAGCTGTT-------------------------------GCCCGTGCACCTGCT--CTCCA--------ATGAAGGCAGCAATGAAGCGTGTAATTGATGCACCGAAAGGGGCAGGGGG-GG-----------------------------------------------------------------ACC-------CT-ACC---------------------------------------TTTAAG-TT----------GAACCAAC------GATT---------ACCTGCC----------------ACT------AACCTCAATCTTC----------CCC---CTCT-CTCTCTCTCTCTCT----CTCTCGTTGCAGCTGTGCGCTTTGGTCGCGTGCCGAAGCGAGA-GAAGGCGCGCATCCTGGCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTCGCGTGCCGAAGC........................1911.0010010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGCCGAAGCGAGA-GAAGGCGC...........2411.0010000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGCTTTGGTCGCGTGCC.............................2011.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGA-GAAGGCGCGCATCCT....2111.0010000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCGTTGCAGCTGTGC.............................................1811.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTCGCGTGCCGAAGC........................1811.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGCCGAAGCGAGA-GAAGG..............2111.0010000000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCGAGA-GAAGGCGCGCATCC.....2311.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCGAAGCGAGA-GAAG...............1811.0010000000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTCGCGTGCCGAAGCGAG.....................2111.0010000100000
.........................................................CGGGGGGATGGGGG---------------------------------------------------------------------GG-------------GG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCT----CTCTCGTTGCAGCTG................................................2120.5010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCTCT----CTCTCGTTGCAG...................................................2050.2010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-CTCTCTCTCTCTCT----CTCTCGTT.......................................................23200.0510000000010
droPer2
CCACTTTCAAGGGCACTAAATTACACAAGGGAC----------------GA---------------------------------------------------------------------------------GG-GTAT-CG---------G--GGGGCACTTCCTGCGTGACAAGCC---------------------------------------AGGACAACAGCTGTT-------------------------------GCCCGTGCACCTGCT--CTCCA--------AC---GGCAGCAATGAAGCGTGTAATTGATGCACCGAAAGGGGT-GGGGG-GG-----------------------------------------------------------------ACC-------CT-ACC---------------------------------------TTTAAG-TT----------GAACCAAC------GATT---------ACCTGCC----------------ACT------AACCTCAATCTTC----------CCC---CCT-C-------TCTCTCT----CTCTCGTTGCAGCTGTGCGCTTTGGTCGCGTGCCGAAGCGAGAGAAAGGCGCGCATCCTGGCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
AAAAACGAAAAAAAAGA-----------------------------------------------------------------------------------------------------------------------AAAACT------C-AA--AACTCACTTCCTGCGTGACAA--AGAAACAA--------AC--------------AACA-GACAGGACAACAGCTGCTGTTGCTGCTGTTGCTTGTCCCTTTATTTTCTT--GTTGCACCTGCT--GT-------------------------------TGTAATTA-------------------------------------------------CAGAC--------GATGATGAAGATGAAGATGATGATGATGATGATGATTGTT-AC-------------------------ATA------------TGTACCTTGTATATATAAA-CTGTATT------TCTT---------TAAACAAAAAGT-----------ACT------AACCGGAAT----------------GTAT------------TTTTTTT----TTGTTTTTGCAGCTGTGCGATTTGGACGCGTGCCCAAGCGAGA-GAAGGCGCGCATTTTGGCCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................................................................................A-GACAGGACAACAGCTGCTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGA-GAAGGCGCGCATTTTG...2111.00101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGATTTGGACGCGTGCCCAA..........................2311.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGGACGCGTGCCCAAGC........................2111.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................ATGATGATTGTT-AC-------------------------ATA------------T................................................................................................................................................................................................1811.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................GAAGATGATGATGATGATGAT...................................................................................................................................................................................................................................................21200.30620130
........................................................................................................................................................................................................................................................................................................................................................................................................GATGAAGATGATGATGATGATGAT...................................................................................................................................................................................................................................................24200.25500230
........................................................................................................................................................................................................................................................................................................................................................................................................GATGAAGATGATGATGATGAT......................................................................................................................................................................................................................................................21200.25500230
.......................................................................................................................................................................................................................................................................................................................................................................................................AGATGAAGATGATGATGATGATGAT...................................................................................................................................................................................................................................................25110.18200020
.....................................................................................................................................................................................................................................................................................................................................................................................................GAAGATGAAGATGATGATGATGAT......................................................................................................................................................................................................................................................2470.14100001
.......................................................................................................................................................................................................................................................................................................................................................................................................AGATGAAGATGATGATGATGAT......................................................................................................................................................................................................................................................22140.14200020
........................................................................................................................................................................................................................................................................................................................................................................................................GATGAAGATGATGATGATGATGA....................................................................................................................................................................................................................................................23200.10200020
..........................................................................................................................................................................................................................................................................................................................................................................................................TGAAGATGATGATGATGAT......................................................................................................................................................................................................................................................19200.10200020
.......................................................................................................................................................................................................................................................................................................................................................................................................AGATGAAGATGATGATGATGATG.....................................................................................................................................................................................................................................................23130.08100010
............................................................................................................................................................................................................................................................................................................................................................................................................AAGATGATGATGATGATGAT...................................................................................................................................................................................................................................................20200.05100010
.......................................................................................................................................................................................................................................................................................................................................................................................................AGATGAAGATGATGATGATG........................................................................................................................................................................................................................................................20200.05110000
..........................................................................................................................................................................................................................................................................................................................................................................................................TGAAGATGATGATGATGA.......................................................................................................................................................................................................................................................18200.05100001
..........................................................................................................................................................................................................................................................................................................................................................................................................TGAAGATGATGATGATGATGATG..................................................................................................................................................................................................................................................23200.05100100
..........................................................................................................................................................................................................................................................................................................................................................................................................TGAAGATGATGATGATGATGA....................................................................................................................................................................................................................................................21200.05100010
........................................................................................................................................................................................................................................................................................................................................................................................................GATGAAGATGATGATGAT.........................................................................................................................................................................................................................................................18200.05100100
........................................................................................................................................................................................................................................................................................................................................................................................................GATGAAGATGATGATGATGATG.....................................................................................................................................................................................................................................................22200.05100100
..........................................................................................................................................................................................................................................................................................................................................................................................................TGAAGATGATGATGATGATG.....................................................................................................................................................................................................................................................20200.05100010
droVir3
CCAGTTGGAAGGGCAGCGTCTGT----------------------------------CGAGTGGAGGGCGCGGGGCACGGGGCGTTGCTGGCCATAAATTACAGGGCCAGCGCCTGTGTACAGTGAGCTCTC-T-GTACAGG----TAT-GA--CAAGCGCTTCCTGCGTGACAAA-C---------------------------------------AGAACAACAGCTGCT-------------------------------C--CTTGCACCTGTT--CGC-----------------------CGAAGTGTGACACCTTTGTA------------------TA------------------------------TACATAAG------------------------------------------------C--------TCCTACATATATA------------TATATA-TA----------TA---------------TATAAGACTTGTAG--------------CTGTGCGTGTTATTAA------TTTGC----------CCC---CTCT--TCTGC-TTCTTTC----CTCCCGTTGCAGCTGTGCGCTTTGGTCGCGTGCCCAAGCGAGA-GAAGGCGCGCATTTTGGCCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGTCGCGTGCCCAAGCGAGA-GAA................2711.001000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAGA-GAAGGCGCGCATT......2011.001000000000000001000000000000000000000000000000000000000000000000
...........................................................................................CCATAAATTACAGGGCCAGCGCCTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000100000000000000000000000000000000000000000000
.......................................................................GGGGCACGGGGCGTTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
..............AGCGTCTGT----------------------------------CGAGTGGAGGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTCGCGTGCCCAAGCGAG.....................2211.001000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTGGTCGCGTGCCCAA..........................1911.001000000000000000000000000000000000000000000000000000000000001000
...........................................................AGTGGAGGGCGCGGGGCACGGGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000010000000000000000000000000000000000
.............CAGCGTCTGT----------------------------------CGAGTGGAGGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000000000000000000000000000000000000000000000000000000000000
droMoj3
CCAGTTCGAAGGGCTGTCCATA--------------------------------------------------------------------------AATTACAGTT---GTGCCT--GTACAGTGAGCTCACGC-ACACACG--------GA--CAAGAACTTCCTGCGTGACAA--ACG-------------------------------------GCGGCAACAGCTGCG-------------------------------C--CTTGCACCTGCT-------------------------CACTGAAGTGTGAGGC-------------------------GGACAGACAACAAAAAATTGCACTTGCATACATACATATA------------------------------------------------C--------ACATACATACATA------------TATACA-TACATATATAAATATATACA------TAT--------------------ATGCTCATCTGAATATATTGTTAA------TTTTG----------CAA---CTC---------TTTTTCTG---TCTACTTTGCAGCTGTTCGCTTTGGTCGCGTGCCGAAGCGCGA-AAAGGCGCGTATTTTGGCCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................GACAA--ACG-------------------------------------GCGGCAACAGCTGCG-------------------------------C--CTTG.....................................................................................................................................................................................................................................................................................................................................................................................................2811.001000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA-AAAGGCGCGTATTTTGGC.2011.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTTCGCTTTGGTCGCGT................................2011.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGA-AAAGGCGCGTATTTTGGCC2311.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CATACATACATA------------TATACA-TACATAT...................................................................................................................................................................................25120.081100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATACATA------------TATACA-TACATA....................................................................................................................................................................................21200.051100000
droGri2
CCAGTTTAAAGGGCTGCCA-----------------------------------------------------------------------------------------------------------------GG-CTACAGT-------------AAACACTCGCTATGCGGGT--------CATCGTCAGCTGTGCAGCTT-------T-------------GCA-----G-------------------------------C--TTTGCACCTGTT--GTT-------------------------------------------------------------G------------------------------------------------------------------CTG------------TTTTTTTCTCTTCTTTCTTGCA-------------------TTAA--------------TTTGTACA------TGTT---------GCAAGGCCTAAA-----------CAA-TTATTAAG------TCCG----------CAATT-------------TTTTCTT----CTTTATTTTTAGCTGTGCGTTTTGGTCGCGTGCCGAAGCGAGA-AAAGGCGCGCATTTTGGCCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTCGCGTGCCGAAGCGAGA-AAAG...............2620.50110
.......AAAGGGCTGCCA-----------------------------------------------------------------------------------------------------------------GG-CTAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.50110

Generated: 05/18/2015 at 01:10 PM