dsi_21629

GTAATTTTCTTAAAATTATTTAAATCCTCCTTCAGATTATTAAACCTACAAATAGCCTGCTTTTAGAAATTTGGTTATAGAATATAAATAGAATAGAAAATTTCTTTTGCATCCTCCACAGTTTTATACTGTACTCCTCCAAAATAACATCACTCCGCTTTCTTTACGTTAATGTTTGTTTTTAAACTTTTTTTTTAAAGAAGATCCCACAAATGCTTAAGTTGAGATCAGGACTCTGGATTTTAAATTT ************************************************......((.......((((...((((.(((((.(((((((.((((((((.....(((((........(((((.....))))).......)))))..............)))))....)))..))))))))))))))))...))))...))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR618934 dsim w501 ovaries	M024 male body	SRR553487 NRT_0-2 hours eggs	M053 female body	M023 head	SRR553485 Chicharo_3 day-old ovaries	SRR553488 RT_0-2 hours eggs
........................................................................................TAGAATAGAAAATTTC..................................................................................................................................................	16	0	1	2.00	2	2	0	0	0	0	0	0
.......................................................................................................................................................................................AAACTCTGTTGTTAAAGAAGA..............................................	21	3	5	1.20	6	0	2	0	3	1	0	0
......................................................................................AATAGAATAGAAAATTTC..................................................................................................................................................	18	0	1	1.00	1	1	0	0	0	0	0	0
.......................................................................................ATAGAATAGAAAATTTCCTT...............................................................................................................................................	20	1	3	0.67	2	2	0	0	0	0	0	0
........................................................................................TAGAATAGAAAATTTCCT................................................................................................................................................	18	1	3	0.67	2	2	0	0	0	0	0	0
.........................................................................................AGAATAGAAAATTTCCTTTG.............................................................................................................................................	20	1	3	0.67	2	2	0	0	0	0	0	0
...............................................................................................................................TCTGTACTCCTACAAAAAAACA.....................................................................................................	22	3	4	0.50	2	0	0	2	0	0	0	0
........................................................................................TAGAATAGAAAATTTCC.................................................................................................................................................	17	1	3	0.33	1	1	0	0	0	0	0	0
........................................................................................TAGAATAGAAAATTTCCTTTG.............................................................................................................................................	21	1	3	0.33	1	1	0	0	0	0	0	0
........................................................................................TAGAATAGAAAATTTCCTT...............................................................................................................................................	19	1	3	0.33	1	1	0	0	0	0	0	0
........................................................................................TAGAATAGAAAATTTCCTTT..............................................................................................................................................	20	1	3	0.33	1	1	0	0	0	0	0	0
......................................................................................AATAGAATAGAAAATTTCCTTT..............................................................................................................................................	22	1	3	0.33	1	1	0	0	0	0	0	0
......................................................................................AATAGAATAGAAAATTTCCTT...............................................................................................................................................	21	1	3	0.33	1	1	0	0	0	0	0	0
.......................................................................................................................................................................................AAACTCTGTTGTTAAAGAAG...............................................	20	3	16	0.31	5	0	5	0	0	0	0	0
.......................................................................................ATAGAATAGAAAATTT...................................................................................................................................................	16	0	4	0.25	1	1	0	0	0	0	0	0
..........................................................................................GAATAGAAAATTTCCTTT..............................................................................................................................................	18	1	4	0.25	1	1	0	0	0	0	0	0
......................................................................................AATAGAATAGAAAATT....................................................................................................................................................	16	0	6	0.17	1	1	0	0	0	0	0	0
....................................................................................................................CACAGTTTTATCCGGTA.....................................................................................................................	17	2	12	0.17	2	0	0	2	0	0	0	0
.......................................................................................ATAGAATAGAAAATT....................................................................................................................................................	15	0	7	0.14	1	1	0	0	0	0	0	0
....................................................................................................................CACAGTTTTATCCGGT......................................................................................................................	16	2	20	0.10	2	0	0	1	0	0	0	1
........................................................................................................................................................................................AACTCTGTTGTTAAAGAAGA..............................................	20	3	15	0.07	1	0	1	0	0	0	0	0
.............................................................................................TAGAAAATTTCCTTTG.............................................................................................................................................	16	1	19	0.05	1	1	0	0	0	0	0	0
.........................................................................................................................................................................................................................................CTCTGGATTGTAAACT.	16	2	20	0.05	1	0	0	0	0	0	1	0
.....................................................................................................................ACAGTTTTATCCGGTA.....................................................................................................................	16	2	20	0.05	1	0	0	1	0	0	0	0

CATTAAAAGAATTTTAATAAATTTAGGAGGAAGTCTAATAATTTGGATGTTTATCGGACGAAAATCTTTAAACCAATATCTTATATTTATCTTATCTTTTAAAGAAAACGTAGGAGGTGTCAAAATATGACATGAGGAGGTTTTATTGTAGTGAGGCGAAAGAAATGCAATTACAAACAAAAATTTGAAAAAAAAATTTCTTCTAGGGTGTTTACGAATTCAACTCTAGTCCTGAGACCTAAAATTTAAA ************************************************......((.......((((...((((.(((((.(((((((.((((((((.....(((((........(((((.....))))).......)))))..............)))))....)))..))))))))))))))))...))))...))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553487 NRT_0-2 hours eggs	SRR553486 Makindu_3 day-old ovaries	SRR618934 dsim w501 ovaries	SRR902008 ovaries	SRR553488 RT_0-2 hours eggs	SRR553485 Chicharo_3 day-old ovaries
............................................................................................................................................................................................................AGGGTGTTTACGAATTCAACTCTAGT....................	26	0	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................AAAAAAAATTTCTGCTTGCGTGTT......................................	24	3	2	0.50	1	0	1	0	0	0	0
..................................................................................................................................................................................................................TTTACGAAGTCTACACTAGTC...................	21	3	2	0.50	1	1	0	0	0	0	0
.........................................................................................................................AAAGTATGACATGGTGAGGT.............................................................................................................	20	3	4	0.25	1	0	0	1	0	0	0
................................................................................................................................................................................................AAAATTTGTTTTAGGGTGTT......................................	20	2	4	0.25	1	0	0	0	1	0	0
............................................................................................................................................................................................AAAAAAAATGTCTCCTTGGGT.........................................	21	3	10	0.10	1	0	0	0	0	1	0
..........................................................................................................................AAATTTCACATGAGAAGGTT............................................................................................................	20	3	18	0.06	1	0	0	0	0	0	1
...........................................................................................................................................................................................AAAAAAAAATTTTTTCTTGGTT.........................................	22	3	20	0.05	1	0	1	0	0	0	0

Species	Coordinate	ID	Alignment
droSim2	2l:21195617-21195866 +	dsi_21629	GTAATTTT-C-TTAAAATTATTT-------------AA-----------------------------------------------------------------------------------------ATCCTCCTTC----------------------------AGATTATTAAACCTACAAATAGCC-TGCTTTTAGAAAT-----------------------------TTGGTTATAGAA---------------TATAAAT----AGAA-TAGAAAATTTCTTTTGCATCCTCCACAGTTT-TATACTGTACTCCTCCAAAATAACATCACTCCGCTTTCTT---TACGTTAATG-----------------TTTGTTTTTAAACTTT-TTTTTTAAAGAAGATCCCACAAATG----------------------CTTAA----GTT-----------------------------GAGATCAG-GACTCTGGAT-TTT-------------------------AAATT----T
droSec2	scaffold_28:519503-519763 +		GTAATTTT-C-TTAAAATTA-------------------TTTAACAATACTTCATTTTAAT------------------------CAAT-TTTAAAATTAAA-------------------------ATCCTCCTTC----------------------------AGATTATTAAACCTACAAATAGCC-TGCTTTTAGAAAT-----------------------------TTGGTTATAGAA---------------TATAAAT----AGAA-TAGAAAATTTCTTTTGCATCCTCAACAGTTT-GATACTGTACTCCTCCAAAATAACATCACTCCGCTTTCTT---TACGTTAATG-----------------TTTGTTTTTAAACTT--TTTTTTAAAGAAGATCCCA----------------------------------------------------------------------------G-GACTCTGGAT-TTT-------------------------AAATT----T
dm3	chr2L:21911407-21911646 +		TTAAATC---------------------------------------------------------------------------------------------------------------------------GTCTTTC----------------------------AGATTTTTCAACAAATAAATAGAC-TGTTTTTAAAAAATAC-------------------------TTTGGGTATAGAA---------------TATAAAT----AGAA-TAAAAACTTTCTTATGTATCCTCCGCACTTATTATACTCCAAACCTCCAAAATGACATCATTCCGCTTTCTT---TAAGTTAAAG-----------------TGTGTTTTTAAATTT--TTCTTTCAAGAAGATCTCACAAATG----------------------CTTGATATGATT-----------------------------GAGATCAG-GACTCAGGATTTTT-------------------------AAATT----T
droEre2	scaffold_4845:16894993-16895091 -		TTTTTTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTAATT-----------------TTTTGGTGTTAATAA--TTCTTGCATGAAGATCCCACAAACG----------------------CTCGATAGGTTT-----------------------------GAGATCAG-GACTCTCGGGAGATGTTTGCA----------------------T----T
droYak3	v2_chrUn_291:699-1028 -		ACATTTTT-T-TTAGAATTA-------------------TTGAATAA---------------TATGGTATATTACATTTTATTTTTAAT-TTTAAACTTAATACTAAAA---TAAA-AGTCACAAAAGTCTGCGTACAGAGTATAT-GTAAATATATTAT---------------ATTGAAAAGTGGAC-CCTTTTTA--------------------------------------------------------------TGGCAT----GGAA-AGAACA-AGTTTTTTGTCTCCTCCGCAGTTAT-GTGCCTCATTCCACCAAAATAACATCCTTGAGCATTTTTTTTGATGTTATTG-----------------TTCGTTTGCGAATTT--TTTGCTTGAGCAGATCCCACAAATG----------------------GTCAATAGGATT-----------------------------GAGATCAG-GACTCTGGGGAGGTGTTCGCAG--------CTGATTTTTGACAT----T
droEug1	scf7180000409008:363558-363705 +		AT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTCTGCCGTTATTTGACTCCATTCTTCCTGAATGACCCTTTTGAGCATATCTTTGGATCTTATGG-----------------AGTGTTGGCGAATCC--TGCGCTCCAATAAGTCCCACAGATG----------------------TTCAATAGGATT-----------------------------GAGATCAG-AGGCTTAGGGTTGC-------------------------GAATT----T
droBia1	scf7180000301518:40070-40277 +		ATTATTTT-T-TTAAATGAA-----------------------ACTATAGTTTATTGTCTTCAATGACGTGTTATATTTAATTTATAAT-TTTAAACTTAACACTACCA------------------------------------------------------------------------------------------------------------------------------------------------------------A----AGAG-TCAACGATTTTTTTTGTTTTTGCCGGTGAGATTTTACCCCATTCCTCCACAATTACATCCTTAAGAATTTCTTT---------TA-----------------TGTGCTTTCGGATTT---TTTTTCAAGAAGATCTAACAAGTG----------------------TTTGA----------------------------------------------------------------------------------------------
droTak1	scf7180000414190:8644-8855 +		TTCATGTC-TTTTGC-ATTAATT----------------------------------------------------------------------------------------------------------CCTCTTTC----------------------------AAA--ATCAAATTTCTAAAAAAAC-AGTTTTTAATTTTTT-AAAATAAAAACAAATTA---------AGATTTAAAAAAA--------------------------------------------------------AATTT-TAACCATTGCCCCCACAAAAAGAAATAATTT----TTTTT---TATTTTAATACTTGCGCCATATTGTTAGTTACAATCG-----------------------------GTT----------------------TTTGTAA----A-----------------------------AAATTGGAGCCA---------------------CTTTTA---GTTTTTAA-------A
droEle1	scf7180000491021:417865-418057 +		TAATTTTT---TTACAAT-GTTTCAAGCTGTTTTACAAATTAAAAAA---------------ATTAATTTTTTAAATTTTTTGAAAAAT-T---------------------------------------------------------------------------------------------------------TAAAATT-----------------------------TGTTTGAAAAAA---------------TTTAAAG----AAAA-TTGAAATTTTTTG------------AAAAAA-------------------------------------------------------------------------------------------TTTTAAGATGTTTTTTAAAATGTTTTAAAAATTTAAAACAAGTGTTA-----------------------------------------------------ATATTATT-------AAATTTTTA---GATT---TTTT----T
droRho1	scf7180000762496:4361-4662 -		TTAACACT-------------------------------------------------------------------------------------------------ACGAAAAAGTGTACGCGCAAAAGTCTGCTTTCAGTTTAGTAT---------------------------AACGTAAAAGAAGAT-CCTTTTCAGTAAC-------------TTGTTGAGTATCC-TTTCCTCTGGAGAACCTCCGTAAAACGTTTCGGCAT----GGAG-----------TTTTGGTCTCCTCCGTAGTGATTTTGCCCCATTCCTTCATAATTACCTCCTTGAGCATTTTT-TTGATGTCATTG-----------------TGTGCTTTCGGATTT--TTCTCTCAAGGAGATCCCGCAAATG----------------------TTCAATTGGGTT-----------------------------CAGATCCG-GACTCTGGGGTGGTGCTCGCAG--------CTGATTTTTGACAT----T
droFic1	scf7180000451466:19347-19505 +		ATG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAA-TCCACTAGGTTTTTGGTTTCATCTGCAGTAATTTTCCCCCACTCCTCCAGAATCACATCCTTGAGCATTTTTTTTGATGTAATCG-----------------TGTGTTTTCGGATTT--TCCTCTCAAGAAGATCCCACAAATG----------------------CTCAATGGGGCT-----------------------------TAGATCAG-GACTCTGG-----------------------------------------
droKik1	scf7180000298710:490-771 -		AGTTTGCG------------------------------------------------------------------------------------------------------------------------------TACAGCTAATAAT-ATCGT-CATTTATTTACAGATTAGTAACTTGTCAGGTAGCC-----------------------------------------CTTAGTCTTCAAAACTTCCCTCAGACATTTAGGCAT----CGAT-TCCACTAGTTTTCTTGTATCCTCTGCAGTTATTTTCTGCCATTCCTCTAAGATAACAGCCTTTAGCATAGGTTTGTATGTAATGA-----------------TGCGTTTCCGTATAC--GACGCTCCAAAAGACCCCACAAATG----------------------TTCGATTGGATT-----------------------------CAAGTCTG-GTTATTGTGGAGGAGTTCGCAA--------CTATTTTT-TAGAT----T
droAna3	scaffold_12613:51408-51611 +		TTATTGAA--------AATATTT-------------AG-----------------------------------------------------------------------------------------AAGTTGTTTT----------------------------GGAGTTTTAAGCTTATAAAAATTT-----------------------------------------------------------------------CTAAAT----TAAA-TCTAAATTATCTATTTTATTATT--TATTTA-GATAATCTATTTTATTAATTTAACACTATAAAAATTACTT---CACATTAAAA-----------------TTTCAGTTCAAATTTTTTTTTTAAATATATACCAAAAAAATA----------------------CTAGAGAGGCTT-----------------------------TAGAG--------------------------------------------GAAA----T
droBip1	scf7180000396439:9604-9976 +		GTATTTTT-T-CTAAATTAA-------------------TTCAACAA--------------------TATCTTATATTTAAATCTTAATCTTTAAACTTAGCACTACTAAAATATGTATACGCAAAAGTCTGAGTACAGCCAACAA-AAAACTATTTTTA---------------ATTGGA-AGTTTACTTCTTTTAAATACC-------------TAGTTTA---------TTCTCTGAAAAACTTCCGTAAGGCCTCTCGGCAT----AGAA-TGGACTAATTTTTTGGTCTCCTCTGCAGTAATTTTGCTCCATTCCTACACAATTACATCCTTAAGCATTTTT---GTTGATATTT-----------------TGTGTTAACGGATCG--TTCGCTCTAGTAGATCCCACAAATG----------------------CTCTATTGGATT-----------------------------TAGATCCG-GACTCTGGGGAGGTGTTCGCAG--------CTGGTTTTTGACAATATAT
dp5	XR_group8:6659033-6659251 +		GGAGCCTGGCTGTAT-A-A----------------------------------------------------------------------------------------------------------------------------TTAG---------------------------AATGAAATTGGAAAT-GTTTTGTA----C-------------CTGGCCAACATGCTCCTTATGCTGAGGTTGCTCCTCAATTACGTGGAA-T----TAAA-------------TTAATTCCGTTTGCAGCAATATTTCTT---TTGCTCAAAATTATGTCA---------------------------------------------------------------TTTGGAAACATGAATCGAGTG----------------------TGCGA----TTTGACTTCAGGAACATGCTAGAATCTGGATCTGATTCGATAAG------------------------------------TAAAC----C
droPer2	scaffold_1199:1317-1486 -		TTGTTTAT----TAAAT----TT-------------AAACTTTATGG--------------------AATT----------------------------------------------------------TTTCCTTA----------------------------ATATTTTTAA------------------------A-AATTC-------------------------TTTATTTTTAGGA---------------TATTGACCATATGAA-TAAAAAAATT-----------------------------------------------------------------CGGCTGAATA-----------------TTTGTTTTCAAATT--------TAAAAGCAACCCAATGAGTT----------------------CCTGAATGGCTT-----------------------------GA-----A-GAATCTGTGT-TTG-------------------------CTATT----A
droWil2	scf2_1100000004542:7150-7325 +		AATTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGTTACATCTGGCGAAATTTGATGCCACTCCTCCATGATTACATTTTTCAACATCTCCTTGGATGTAATAG-----------------TTCGTGAGCGAATCC--TACGCTCCAGAACATCCCAAAGATG----------------------TTCAATGGGGTT-----------------------------AAGATCTG-GCGACTGGGGTGGCGAGTGCAG--------CTGGTTTTTGGTGT----T
droVir3	scaffold_12728:18995-19150 -		CAATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTGCCACTCTTCCATTAGGGCTTCTTTAAGCTCAGTCTTTGTTGAAAATG-----------------TATGCTTTCTAAGCC--TTTTTTCTAGTTCCTCCCATAGGTG----------------------CTCGATTGGATT-----------------------------GAGGTCTG-GTGATTGAGGAGGATGTGGAAGAACATGAGCTG------TATTG----T
droMoj3	scaffold_6501:169281-169416 +		AATGTAGTTATTTAA-A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAAA----ATTATTTTAAAATTTTTTTTTTATATATATATGTGC-TATGTTGTATTCTTAAAACAAAATATTGTATATTTTTT--TTTTATTTTAATT-----------------TTTTTTTT-TAATTTT-CTTTTAACATA--------------------------------------------------------------------------------------------------------------------------------------A
droGri2	scaffold_15203:4737700-4737923 -		GCAATTTTATTTTAT-ATTGTTT--------------------------------------------------------------TAATTTTCATAATTAAC-----------------------------------------------------------------------------------ACTT-CCTTTTTAATAAATAT-------------------------AAAACTCTCAATA---------------TAATAAT----AAAA-TGGCAGTTATACCATATAA-TTTTATAGTAATTATACCACATAATATCTTATCGAATTTCTT------ACAA---CATTATGAAG-----------------CCCGT------------TTTATATAAGTGGAAAATACGAATT----------------------TTTGAAA----C-----------------------------GAAATCGAGAAATTTACGT-TTC-------------------------AAGTT----T

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

GTAATTTT-C-TTAAAATTATTT-------------AA-----------------------------------------------------------------------------------------ATCCTCCTTC----------------------------AGATTATTAAACCTACAAATAGCC-TGCTTTTAGAAAT-----------------------------TTGGTTATAGAA---------------TATAAAT----AGAA-TAGAAAATTTCTTTTGCATCCTCCACAGTTT-TATACTGTACTCCTCCAAAATAACATCACTCCGCTTTCTT---TACGTTAATG-----------------TTTGTTTTTAAACTTT-TTTTTTAAAGAAGATCCCACAAATG----------------------CTTAA----GTT-----------------------------GAGATCAG-GACTCTGGAT-TTT-------------------------AAATT----T	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.........................................................................................................................................................................................................................................................................T----AGAA-TAGAAAATTTC..............................................................................................................................................................................................................................................................	16	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................AAT----AGAA-TAGAAAATTTC..............................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................T----AGAA-TAGAAAATTTCC.............................................................................................................................................................................................................................................................	17	3	0.33	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................AT----AGAA-TAGAAAATTT...............................................................................................................................................................................................................................................................	16	4	0.25	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................AAT----AGAA-TAGAAAATT................................................................................................................................................................................................................................................................	16	6	0.17	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................AT----AGAA-TAGAAAATT................................................................................................................................................................................................................................................................	15	7	0.14	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0

droSec2

GTAATTTT-C-TTAAAATTA-------------------TTTAACAATACTTCATTTTAAT------------------------CAAT-TTTAAAATTAAA-------------------------ATCCTCCTTC----------------------------AGATTATTAAACCTACAAATAGCC-TGCTTTTAGAAAT-----------------------------TTGGTTATAGAA---------------TATAAAT----AGAA-TAGAAAATTTCTTTTGCATCCTCAACAGTTT-GATACTGTACTCCTCCAAAATAACATCACTCCGCTTTCTT---TACGTTAATG-----------------TTTGTTTTTAAACTT--TTTTTTAAAGAAGATCCCA----------------------------------------------------------------------------G-GACTCTGGAT-TTT-------------------------AAATT----T	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
No Reads

dm3

TTAAATC---------------------------------------------------------------------------------------------------------------------------GTCTTTC----------------------------AGATTTTTCAACAAATAAATAGAC-TGTTTTTAAAAAATAC-------------------------TTTGGGTATAGAA---------------TATAAAT----AGAA-TAAAAACTTTCTTATGTATCCTCCGCACTTATTATACTCCAAACCTCCAAAATGACATCATTCCGCTTTCTT---TAAGTTAAAG-----------------TGTGTTTTTAAATTT--TTCTTTCAAGAAGATCTCACAAATG----------------------CTTGATATGATT-----------------------------GAGATCAG-GACTCAGGATTTTT-------------------------AAATT----T	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................TTTCAAGAAGATCTCACAAATG----------------------CTT................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................CCGCACTTATTATACTCCAAACCTC..........................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

TTTTTTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTAATT-----------------TTTTGGTGTTAATAA--TTCTTGCATGAAGATCCCACAAACG----------------------CTCGATAGGTTT-----------------------------GAGATCAG-GACTCTCGGGAGATGTTTGCA----------------------T----T	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
No Reads

droYak3

ACATTTTT-T-TTAGAATTA-------------------TTGAATAA---------------TATGGTATATTACATTTTATTTTTAAT-TTTAAACTTAATACTAAAA---TAAA-AGTCACAAAAGTCTGCGTACAGAGTATAT-GTAAATATATTAT---------------ATTGAAAAGTGGAC-CCTTTTTA--------------------------------------------------------------TGGCAT----GGAA-AGAACA-AGTTTTTTGTCTCCTCCGCAGTTAT-GTGCCTCATTCCACCAAAATAACATCCTTGAGCATTTTTTTTGATGTTATTG-----------------TTCGTTTGCGAATTT--TTTGCTTGAGCAGATCCCACAAATG----------------------GTCAATAGGATT-----------------------------GAGATCAG-GACTCTGGGGAGGTGTTCGCAG--------CTGATTTTTGACAT----T	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATT-----------------------------GAGATCAG-GACTCTGGGG.......................................	24	3	1.00	3	0	3	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................TTTTTGTCTCCTCCGCAGTTAT-GTGCC...................................................................................................................................................................................................................................	27	2	1.00	2	0	2	0	0	0	0	0	0	0	0	0
........................................................................TACATTTTATTTTTAAT-TT................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................CAT----GGAA-AGAACA-AGTTTTTTGTCTCC....................................................................................................................................................................................................................................................	27	4	0.75	3	0	1	1	0	0	0	1	0	0	0	0
.........................................................................................................................................................................................................................................................................T----GGAA-AGAACA-AGTTTTTTGTCTCC....................................................................................................................................................................................................................................................	25	4	0.75	3	0	2	1	0	0	0	0	0	0	0	0
..................................................................................................................................TGCGTACAGAGTATAT-GTAAATATATT..............................................................................................................................................................................................................................................................................................................................................................................................	27	5	0.40	2	0	1	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................TTTTTGTCTCCTCCGCAGTTAT-GT......................................................................................................................................................................................................................................	24	5	0.40	2	0	2	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------------GAGATCAG-GACTCTGGGGAGG....................................	22	3	0.33	1	0	1	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATAGGATT-----------------------------GAGATCAG-GACTCTGGG........................................	28	3	0.33	1	0	1	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATT-----------------------------GAGATCAG-GACTCTGG.........................................	22	3	0.33	1	0	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATT-----------------------------GAGATCAG-GACTCTGGGGAG.....................................	26	3	0.33	1	0	1	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------------GAGATCAG-GACTCTGGGGAGGTGT.................................	25	3	0.33	1	0	1	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGATT-----------------------------GAGATCAG-GACTCTG..........................................	22	3	0.33	1	0	1	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGATT-----------------------------GAGATCAG-GACTCTGGG........................................	24	3	0.33	1	0	1	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------------GAGATCAG-GACTCTGGGGAGGTG..................................	24	3	0.33	1	0	0	0	0	0	0	1	0	0	0	0
........................................................................................................................................................................................................................................................................AT----GGAA-AGAACA-AGTTTTTTGTCTCC....................................................................................................................................................................................................................................................	26	4	0.25	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................TCTGCGTACAGAGTATAT-GTAAATATA................................................................................................................................................................................................................................................................................................................................................................................................	27	4	0.25	1	0	0	0	1	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................AGTTTTTTGTCTCCTCCGCAGTTAT-GT......................................................................................................................................................................................................................................	27	4	0.25	1	0	0	0	1	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................TTTTTGTCTCCTCCGCAGTTAT-G.......................................................................................................................................................................................................................................	23	5	0.20	1	0	1	0	0	0	0	0	0	0	0	0
..................................................................................................................................TGCGTACAGAGTATAT-GTAAATATAT...............................................................................................................................................................................................................................................................................................................................................................................................	26	5	0.20	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................TTTTTGTCTCCTCCGCAGTTAT-GTC.....................................................................................................................................................................................................................................	25	5	0.20	1	0	0	0	1	0	0	0	0	0	0	0
......................................................................................................................................TACAGAGTATAT-GTAAATATATT..............................................................................................................................................................................................................................................................................................................................................................................................	23	5	0.20	1	0	0	1	0	0	0	0	0	0	0	0

droEug1

AT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTCTGCCGTTATTTGACTCCATTCTTCCTGAATGACCCTTTTGAGCATATCTTTGGATCTTATGG-----------------AGTGTTGGCGAATCC--TGCGCTCCAATAAGTCCCACAGATG----------------------TTCAATAGGATT-----------------------------GAGATCAG-AGGCTTAGGGTTGC-------------------------GAATT----T	Size	Hit Count	Total Norm	Total
No Reads

droBia1

ATTATTTT-T-TTAAATGAA-----------------------ACTATAGTTTATTGTCTTCAATGACGTGTTATATTTAATTTATAAT-TTTAAACTTAACACTACCA------------------------------------------------------------------------------------------------------------------------------------------------------------A----AGAG-TCAACGATTTTTTTTGTTTTTGCCGGTGAGATTTTACCCCATTCCTCCACAATTACATCCTTAAGAATTTCTTT---------TA-----------------TGTGCTTTCGGATTT---TTTTTCAAGAAGATCTAACAAGTG----------------------TTTGA----------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droTak1

TTCATGTC-TTTTGC-ATTAATT----------------------------------------------------------------------------------------------------------CCTCTTTC----------------------------AAA--ATCAAATTTCTAAAAAAAC-AGTTTTTAATTTTTT-AAAATAAAAACAAATTA---------AGATTTAAAAAAA--------------------------------------------------------AATTT-TAACCATTGCCCCCACAAAAAGAAATAATTT----TTTTT---TATTTTAATACTTGCGCCATATTGTTAGTTACAATCG-----------------------------GTT----------------------TTTGTAA----A-----------------------------AAATTGGAGCCA---------------------CTTTTA---GTTTTTAA-------A	Size	Hit Count	Total Norm	Total
No Reads

droEle1

TAATTTTT---TTACAAT-GTTTCAAGCTGTTTTACAAATTAAAAAA---------------ATTAATTTTTTAAATTTTTTGAAAAAT-T---------------------------------------------------------------------------------------------------------TAAAATT-----------------------------TGTTTGAAAAAA---------------TTTAAAG----AAAA-TTGAAATTTTTTG------------AAAAAA-------------------------------------------------------------------------------------------TTTTAAGATGTTTTTTAAAATGTTTTAAAAATTTAAAACAAGTGTTA-----------------------------------------------------ATATTATT-------AAATTTTTA---GATT---TTTT----T	Size	Hit Count	Total Norm	Total
No Reads

droRho1

TTAACACT-------------------------------------------------------------------------------------------------ACGAAAAAGTGTACGCGCAAAAGTCTGCTTTCAGTTTAGTAT---------------------------AACGTAAAAGAAGAT-CCTTTTCAGTAAC-------------TTGTTGAGTATCC-TTTCCTCTGGAGAACCTCCGTAAAACGTTTCGGCAT----GGAG-----------TTTTGGTCTCCTCCGTAGTGATTTTGCCCCATTCCTTCATAATTACCTCCTTGAGCATTTTT-TTGATGTCATTG-----------------TGTGCTTTCGGATTT--TTCTCTCAAGGAGATCCCGCAAATG----------------------TTCAATTGGGTT-----------------------------CAGATCCG-GACTCTGGGGTGGTGCTCGCAG--------CTGATTTTTGACAT----T	Size	Hit Count	Total Norm	Total
No Reads

droFic1

ATG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAA-TCCACTAGGTTTTTGGTTTCATCTGCAGTAATTTTCCCCCACTCCTCCAGAATCACATCCTTGAGCATTTTTTTTGATGTAATCG-----------------TGTGTTTTCGGATTT--TCCTCTCAAGAAGATCCCACAAATG----------------------CTCAATGGGGCT-----------------------------TAGATCAG-GACTCTGG-----------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droKik1

AGTTTGCG------------------------------------------------------------------------------------------------------------------------------TACAGCTAATAAT-ATCGT-CATTTATTTACAGATTAGTAACTTGTCAGGTAGCC-----------------------------------------CTTAGTCTTCAAAACTTCCCTCAGACATTTAGGCAT----CGAT-TCCACTAGTTTTCTTGTATCCTCTGCAGTTATTTTCTGCCATTCCTCTAAGATAACAGCCTTTAGCATAGGTTTGTATGTAATGA-----------------TGCGTTTCCGTATAC--GACGCTCCAAAAGACCCCACAAATG----------------------TTCGATTGGATT-----------------------------CAAGTCTG-GTTATTGTGGAGGAGTTCGCAA--------CTATTTTT-TAGAT----T	Size	Hit Count	Total Norm	Total
No Reads

droAna3

TTATTGAA--------AATATTT-------------AG-----------------------------------------------------------------------------------------AAGTTGTTTT----------------------------GGAGTTTTAAGCTTATAAAAATTT-----------------------------------------------------------------------CTAAAT----TAAA-TCTAAATTATCTATTTTATTATT--TATTTA-GATAATCTATTTTATTAATTTAACACTATAAAAATTACTT---CACATTAAAA-----------------TTTCAGTTCAAATTTTTTTTTTAAATATATACCAAAAAAATA----------------------CTAGAGAGGCTT-----------------------------TAGAG--------------------------------------------GAAA----T	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
No Reads

droBip1

GTATTTTT-T-CTAAATTAA-------------------TTCAACAA--------------------TATCTTATATTTAAATCTTAATCTTTAAACTTAGCACTACTAAAATATGTATACGCAAAAGTCTGAGTACAGCCAACAA-AAAACTATTTTTA---------------ATTGGA-AGTTTACTTCTTTTAAATACC-------------TAGTTTA---------TTCTCTGAAAAACTTCCGTAAGGCCTCTCGGCAT----AGAA-TGGACTAATTTTTTGGTCTCCTCTGCAGTAATTTTGCTCCATTCCTACACAATTACATCCTTAAGCATTTTT---GTTGATATTT-----------------TGTGTTAACGGATCG--TTCGCTCTAGTAGATCCCACAAATG----------------------CTCTATTGGATT-----------------------------TAGATCCG-GACTCTGGGGAGGTGTTCGCAG--------CTGGTTTTTGACAATATAT	Size	Hit Count	Total Norm	Total
No Reads

dp5

GGAGCCTGGCTGTAT-A-A----------------------------------------------------------------------------------------------------------------------------TTAG---------------------------AATGAAATTGGAAAT-GTTTTGTA----C-------------CTGGCCAACATGCTCCTTATGCTGAGGTTGCTCCTCAATTACGTGGAA-T----TAAA-------------TTAATTCCGTTTGCAGCAATATTTCTT---TTGCTCAAAATTATGTCA---------------------------------------------------------------TTTGGAAACATGAATCGAGTG----------------------TGCGA----TTTGACTTCAGGAACATGCTAGAATCTGGATCTGATTCGATAAG------------------------------------TAAAC----C	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
......................................................................................................................................................................................TGGAAAT-GTTTTGTA----C-------------CTGGCCAACATGC.......................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	0	0	0	0	0	0	0	0	1	0

droPer2

TTGTTTAT----TAAAT----TT-------------AAACTTTATGG--------------------AATT----------------------------------------------------------TTTCCTTA----------------------------ATATTTTTAA------------------------A-AATTC-------------------------TTTATTTTTAGGA---------------TATTGACCATATGAA-TAAAAAAATT-----------------------------------------------------------------CGGCTGAATA-----------------TTTGTTTTCAAATT--------TAAAAGCAACCCAATGAGTT----------------------CCTGAATGGCTT-----------------------------GA-----A-GAATCTGTGT-TTG-------------------------CTATT----A	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGTT----------------------CCTGAATGGCTT-----------------------------GA-----A-GA...............................................	24	6	0.17	1	0	1	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATGGCTT-----------------------------GA-----A-GAATCTGTGT-TTG-------------------------..........	26	10	0.10	1	0	1	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATGGCTT-----------------------------GA-----A-GAATCTGTGT-TTG-------------------------CT........	28	10	0.10	1	0	1	0	0	0	0

droWil2

AATTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGTTACATCTGGCGAAATTTGATGCCACTCCTCCATGATTACATTTTTCAACATCTCCTTGGATGTAATAG-----------------TTCGTGAGCGAATCC--TACGCTCCAGAACATCCCAAAGATG----------------------TTCAATGGGGTT-----------------------------AAGATCTG-GCGACTGGGGTGGCGAGTGCAG--------CTGGTTTTTGGTGT----T	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
.....................................................................................................................................................................................................................................................................................................................................................................TAG-----------------TTCGTGAGCGAATCC--TACGCT............................................................................................................................................	24	1	11.00	11	0	2	2	7	0
............................................................................................................................................................................................................................................................................................................................................................TGGATGTAATAG-----------------TTCGTGAGCGAA.......................................................................................................................................................	24	1	9.00	9	0	0	0	9	0
.....................................................................................................................................................................................................................................................................................................................................................................TAG-----------------TTCGTGAGCGAATCC--TACGCTCC..........................................................................................................................................	26	1	5.00	5	0	5	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCGAGTGCAG--------CTGGTTTTTGG........	23	1	4.00	4	0	2	0	2	0
...................................................................................................................................................................................................................................................................................................................TTGATGCCACTCCTCCATGATTACATTT.............................................................................................................................................................................................................	28	2	3.00	6	0	6	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................TAATAG-----------------TTCGTGAGCGAATCC--TACGC.............................................................................................................................................	26	1	3.00	3	0	2	0	1	0
.....................................................................................................................................................................................................................................................................................................................................................................TAG-----------------TTCGTGAGCGAATCC--TACGCTC...........................................................................................................................................	25	1	3.00	3	0	3	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................TCC--TACGCTCCAGAACATCCCAAAGA...........................................................................................................................	26	1	2.00	2	0	2	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATGGGGTT-----------------------------AAGATCTG-GCGACT...........................................	25	1	2.00	2	0	1	1	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGGTT-----------------------------AAGATCTG-GCGACTGG.........................................	23	1	2.00	2	0	1	0	1	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATGGGGTT-----------------------------AAGATCTG-GCGACTGG.........................................	27	1	2.00	2	0	2	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................TACGCTCCAGAACATCCCAAAGATG----------------------T..................................................................................................	26	1	2.00	2	0	2	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------------AAGATCTG-GCGACTGGGGTGGCGA.................................	25	1	2.00	2	0	2	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................AAGATG----------------------TTCAATGGGGTT-----------------------------AAGATC....................................................	24	1	2.00	2	0	0	0	2	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------------AAGATCTG-GCGACTGGGGTGGCGAG................................	26	1	2.00	2	0	2	0	0	0
................................................................................................................................................................................................................................................................................................................................................................TGTAATAG-----------------TTCGTGAGCGAATCC--TA................................................................................................................................................	25	1	2.00	2	0	0	0	2	0
..................................................................................................................................................................................................................................................................................................................................................................................................................AGAACATCCCAAAGATG----------------------TTCAATGGGG.........................................................................................	27	1	1.00	1	0	1	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCGAGTGCAG--------CTGGTTTTTG.........	22	1	1.00	1	0	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGGTT-----------------------------AAGATCTG-GCGACTGGG........................................	24	1	1.00	1	0	0	0	1	0
.................................................................................................................................................................................................................................................................................................................................................................GTAATAG-----------------TTCGTGAGCGAATCC--T.................................................................................................................................................	23	1	1.00	1	0	1	0	0	0
..........................................................................................................................................................................................................................................................................................................TGGCGAAATTTGATGCCACTCCTCCATG......................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0
............................................................................................................................................................................................................................................................................................................................................................TGGATGTAATAG-----------------TTCGTGAGCGAAT......................................................................................................................................................	25	1	1.00	1	0	0	0	1	0
.............................................................................................................................................................................................................................................................................................................CGAAATTTGATGCCACTCCTCCATGATC...................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................TGAGCGAATCC--TACGCTCCAGAACA....................................................................................................................................	25	1	1.00	1	0	1	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-GCGACTGGGGTGGCGAGTGCA............................	23	1	1.00	1	0	1	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-----------------------------AAGATCTG-GCGACTGGGGTGG....................................	23	1	1.00	1	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................TTGGATGTAATAG-----------------TTCGTGAGCGAATCC--..................................................................................................................................................	28	1	1.00	1	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................TTGGATGTAATAG-----------------TTCGTGAGCGAA.......................................................................................................................................................	25	1	1.00	1	0	0	1	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGGGTT-----------------------------AAGATCTG-GCGACTG..........................................	24	1	1.00	1	0	1	0	0	0
......................................................................................................................................................................................................................................................................................................................................................TCTCCTTGGATGTAATAG-----------------TTCGTGA............................................................................................................................................................	25	1	1.00	1	0	1	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................TAATAG-----------------TTCGTGAGCGAATCC--TACGCT............................................................................................................................................	27	1	1.00	1	0	1	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................TG----------------------TTCAATGGGGTT-----------------------------AAGATCTG-GCGACA...........................................	28	1	1.00	1	0	1	0	0	0
................................................................................................................................................................................................................................................................................................................................................................TGTAATAG-----------------TTCGTGAGCGAATCC--TACGC.............................................................................................................................................	28	1	1.00	1	0	1	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-----------------------------AAGATCTG-GCGACTGGGGTG.....................................	22	1	1.00	1	0	1	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATGGGGTT-----------------------------AAGATCTG-GCGACTGT.........................................	27	1	1.00	1	0	0	0	1	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGAGTGCAG--------CTGGTTTTTGGT.......	23	1	1.00	1	0	1	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-GCGACTGGGGTGGCGAGTG..............................	21	1	1.00	1	0	1	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................C--TACGCTCCAGAACATCCCAAAGA...........................................................................................................................	24	1	1.00	1	0	1	0	0	0
............................................................................................................................................................................................................................................................................................................................................................TGGATGTAATAG-----------------TTCGTGAGCGAATCC--..................................................................................................................................................	27	1	1.00	1	0	1	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------------AAGATCTG-GCGACTGGGGTGGCGATA...............................	27	1	1.00	1	0	0	0	1	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATGGGGTT-----------------------------AAGATCTG-GCGAC............................................	24	1	1.00	1	0	1	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCGAGTGCAG--------CTGGTTTTTGGTG......	25	1	1.00	1	0	1	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGTT-----------------------------AAGATCTG-GCGACTGGG........................................	23	1	1.00	1	0	1	0	0	0
......................................................................................................................................................................................................................................................................................................................................................TCTCCTTGGATGTAATAG-----------------TTCGTGAGC..........................................................................................................................................................	27	1	1.00	1	0	0	0	1	0
.................................................................................................................................................................................................................................................................................................................................................................................................................CAGAACATCCCAAAGATG----------------------TTCAATGGGG.........................................................................................	28	1	1.00	1	0	1	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................ATGTAATAG-----------------TTCGTGAGCGAA.......................................................................................................................................................	21	1	1.00	1	0	0	0	1	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-----------------------------AAGATCTG-GCGACTGGGG.......................................	20	1	1.00	1	0	1	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................AATCC--TACGCTCCAGAACATCCCAAAG............................................................................................................................	27	1	1.00	1	0	1	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------------AAGATCTG-GCGACTGGGGTGGCGT.................................	25	1	1.00	1	0	1	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-GCGACTGGGGTGGCGAGTGCAG--------T..................	25	1	1.00	1	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGATG----------------------TTCAATGGGGTT-----------------------------AAGATC....................................................	26	1	1.00	1	0	1	0	0	0
...............................................................................................................................................................................................................................................................................................................................................TTCAACATCTCCTTGGATGTAATAG-----------------T..................................................................................................................................................................	26	3	0.67	2	0	2	0	0	0
..................................................................................................................................................................................................................................................................................................................TTTGATGCCACTCCTCCATGATTACATT..............................................................................................................................................................................................................	28	2	0.50	1	0	1	0	0	0
...TT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGTTACATCTGGCGAAATT........................................................................................................................................................................................................................................	24	2	0.50	1	0	1	0	0	0
................................................................................................................................................................................................................................................................................................................AATTTGATGCCACTCCTCCATGAT....................................................................................................................................................................................................................	24	2	0.50	1	0	1	0	0	0
....................................................................................................................................................................................................................................................................................................TACATCTGGCGAAATTTGATGCCACTCC............................................................................................................................................................................................................................	28	2	0.50	1	0	1	0	0	0
.................................................................................................................................................................................................................................................................................................................................CCATGATTACATTTTTCAACATCTCCT................................................................................................................................................................................................	27	2	0.50	1	0	1	0	0	0
...................................................................................................................................................................................................................................................................................................TTACATCTGGCGAAATTTGATGCCACT..............................................................................................................................................................................................................................	27	2	0.50	1	0	1	0	0	0
........................................................................................................................................................................................................................................................................................................TCTGGCGAAATTTGATGCCACTCCTCC.........................................................................................................................................................................................................................	27	2	0.50	1	0	1	0	0	0
................................................................................................................................................................................................................................................................................................................................TCCATGATTACATTTTTCAACATC....................................................................................................................................................................................................	24	2	0.50	1	0	1	0	0	0
.......................................................................................................................................................................................................................................................................................................................TGCCACTCCTCCATGATTACATTTTT...........................................................................................................................................................................................................	26	2	0.50	1	0	1	0	0	0
.......................................................................................................................................................................................................................................................................................................................TGCCACTCCTCCATGATTACATTTT............................................................................................................................................................................................................	25	2	0.50	1	0	1	0	0	0
...................................................................................................................................................................................................................................................................................................................TTGATGCCACTCCTCCATGATTACATT..............................................................................................................................................................................................................	27	2	0.50	1	0	1	0	0	0
...............................................................................................................................................................................................................................................................................................TTGGTTACATCTGGCGAAATTTGAT....................................................................................................................................................................................................................................	25	2	0.50	1	0	1	0	0	0
....................................................................................................................................................................................................................................................................................................TACATCTGGCGAAATTTGATGCCAC...............................................................................................................................................................................................................................	25	2	0.50	1	0	1	0	0	0
................................................................................................................................................................................................................................................................................................TGGTTACATCTGGCGAAATTTGATGC..................................................................................................................................................................................................................................	26	2	0.50	1	0	0	0	1	0
....................................................................................................................................................................................................................................................................................................TACATCTGGCGAAATTTGATGCCA................................................................................................................................................................................................................................	24	2	0.50	1	0	0	0	1	0
....................................................................................................................................................................................................................................................................................................................TGATGCCACTCCTCCATGATTACATTT.............................................................................................................................................................................................................	27	2	0.50	1	0	1	0	0	0
..................................................................................................................................................................................................................................................................................................................................CATGATTACATTTTTCAACATCTCCT................................................................................................................................................................................................	26	2	0.50	1	0	1	0	0	0
..................................................................................................................................................................................................................................................................................................................................CATGATTACATTTTTCAACATCTC..................................................................................................................................................................................................	24	2	0.50	1	0	1	0	0	0
...............................................................................................................................................................................................................................................................................................................................................TTCAACATCTCCTTGGATGTAATAG-----------------...................................................................................................................................................................	25	3	0.33	1	0	1	0	0	0
................................................................................................................................................................................................................................................................................................................................................TCAACATCTCCTTGGATGTAATAG-----------------TTCG...............................................................................................................................................................	28	3	0.33	1	0	1	0	0	0
........................................................................................................................................................................................................................................................................................................................................TACATTTTTCAACATCTCCTTGGAT...........................................................................................................................................................................................	25	3	0.33	1	0	1	0	0	0
........................................................................................................................................................................................................................................................................................................................................TACATTTTTCAACATCTCCTTGGATG..........................................................................................................................................................................................	26	3	0.33	1	0	1	0	0	0
........................................................................................................................................................................................................................................................................................................................................TACATTTTTCAACATCTCCTTGGA............................................................................................................................................................................................	24	3	0.33	1	0	1	0	0	0
.......................................................................................................................................................................................................................................................................................................................................TTACATTTTTCAACATCTCCTTGGAT...........................................................................................................................................................................................	26	3	0.33	1	0	1	0	0	0

droVir3

CAATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTGCCACTCTTCCATTAGGGCTTCTTTAAGCTCAGTCTTTGTTGAAAATG-----------------TATGCTTTCTAAGCC--TTTTTTCTAGTTCCTCCCATAGGTG----------------------CTCGATTGGATT-----------------------------GAGGTCTG-GTGATTGAGGAGGATGTGGAAGAACATGAGCTG------TATTG----T	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
...........................................................................................................................................................................................................................................................................................................................................................TTTGTTGAAAATG-----------------TATGCTTTCTAAGCC--T.................................................................................................................................................	29	7	405.14	2836	1	0	2	10	1	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	2	0	9	6	2	1	1	1	5	0	1	19	0	4	0	0	142	340	219	197	139	191	152	120	258	136	231	141	80	73	68	2	0	126	149	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGTTCCTCCCATAGGTG----------------------CTCGA..............................................................................................	26	8	309.63	2477	0	0	8	1	0	1	28	0	0	0	0	0	20	0	0	0	0	0	0	0	16	0	2	43	219	5	438	16	116	3	14	7	530	0	1	656	28	322	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................TCTAGTTCCTCCCATAGGTG----------------------CTCGA..............................................................................................	25	8	280.38	2243	1	0	289	3	31	2	0	1	0	0	0	0	1	0	0	0	0	0	0	0	2	0	0	4	21	260	33	333	12	88	2	96	27	4	281	40	574	14	47	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	74
...............................................................................................................................................................................................................................................................................................................................................................................................................TCTAGTTCCTCCCATAGGTG----------------------CTCGAT.............................................................................................	26	8	139.50	1116	0	0	68	5	6	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	1	0	0	0	1	46	7	51	3	12	1	14	3	1	36	2	36	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	815
..............................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGTTCCTCCCATAGGTG----------------------CTCGAT.............................................................................................	27	8	33.38	267	0	0	2	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	2	45	0	84	1	18	0	0	0	41	0	0	43	2	25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
...........................................................................................................................................................................................................................................................................................................................................................TTTGTTGAAAATG-----------------TATGCTTTCTAAG......................................................................................................................................................	26	7	30.71	215	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	8	15	27	14	12	6	4	6	37	0	7	45	4	21	2	4	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTG-GTGATTGAGGAGGATGTG...............................	22	15	24.73	371	0	0	3	1	19	28	13	25	15	3	4	3	19	11	0	0	0	0	0	0	17	0	0	20	21	4	29	2	36	11	4	2	14	10	3	9	2	16	9	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	7	0
..............................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGTTCCTCCCATAGGTG----------------------CTCG...............................................................................................	25	8	23.00	184	0	0	0	0	1	3	7	0	0	0	0	0	5	0	0	0	0	0	0	0	9	0	0	13	17	0	41	1	27	0	3	0	14	0	0	17	2	24	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................TTGTTGAAAATG-----------------TATGCTTTCTAAGCC--T.................................................................................................................................................	28	7	21.86	153	1	0	56	72	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	3	0	1	0	0	4	0	0	5	2	1	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................TTTGTTGAAAATG-----------------TATGCTTTCTAAGCC--..................................................................................................................................................	28	7	20.86	146	0	0	4	4	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	5	20	20	5	6	3	1	4	19	0	2	33	1	5	0	0	0	1	0	3	0	3	0	0	0	1	0	0	0	0	0	0	1	1	2	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTG-GTGATTGAGGAGGATGTGG..............................	23	15	17.47	262	4	0	16	1	6	6	6	8	1	0	1	3	5	7	0	0	0	0	0	0	8	0	0	11	20	4	26	4	30	9	7	2	12	6	3	15	2	21	7	5	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	3	0
...............................................................................................................................................................................................................................................................................................................................................................................................................TCTAGTTCCTCCCATAGGTG----------------------CTCGATT............................................................................................	27	8	17.13	137	0	0	44	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	12	0	6	0	5	0	3	1	0	10	0	6	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	48
............................................................................................................................................................................................................................................................................................................................................................TTGTTGAAAATG-----------------TATGCTTTCTAAGCC--..................................................................................................................................................	27	7	16.00	112	0	0	64	33	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	5	0	0	0	1	0	0	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................TCTAGTTCCTCCCATAGGTG----------------------CTCG...............................................................................................	24	8	15.38	123	0	0	36	0	11	0	0	3	1	0	0	1	0	0	0	0	0	0	0	0	3	0	0	0	0	7	1	9	0	6	0	7	0	3	8	1	13	0	9	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTG-GTGATTGAGGAGGATGTGGA.............................	24	15	14.27	214	0	0	5	0	6	1	4	1	2	0	0	3	14	1	0	0	0	0	0	0	0	0	0	8	35	3	48	5	13	3	3	2	16	2	1	15	1	19	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................TCTAGTTCCTCCCATAGGTG----------------------CTCGATTG...........................................................................................	28	8	10.63	85	0	0	43	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	8	0	2	0	0	1	0	13	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTG-GTGATTGAGGAGGATGT................................	21	15	9.80	147	0	0	0	0	5	13	6	2	1	0	0	1	0	0	0	0	0	0	0	0	4	0	0	12	11	1	16	0	34	10	3	2	4	2	0	5	1	7	3	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGTTCCTCCCATAGGTG----------------------CTC................................................................................................	24	8	9.75	78	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	16	0	15	0	22	1	0	0	6	0	0	8	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................TTTGTTGAAAATG-----------------TATGCTTTCTAAGC.....................................................................................................................................................	27	7	8.71	61	0	0	3	0	0	0	0	0	1	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	3	2	13	3	3	0	0	0	3	0	2	20	1	3	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................TGTTGAAAATG-----------------TATGCTTTCTAAGCC--T.................................................................................................................................................	27	7	8.57	60	0	0	8	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	1	12	0	3	0	0	0	13	0	1	12	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTG-GTGATTGAGGAGGATGTGGAAG...........................	26	15	8.13	122	0	0	6	1	4	0	1	0	0	0	0	2	6	0	0	0	0	0	0	0	2	0	0	1	14	3	34	3	8	5	0	2	7	0	2	10	0	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTG-GTGATTGAGGAGGATGTGGAA............................	25	15	7.93	119	0	0	2	1	4	0	3	0	0	0	0	1	9	1	0	0	0	0	0	0	0	0	0	1	13	3	32	3	6	3	2	0	3	1	0	17	1	10	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................CCACTCTTCCATTAGGGCTTCTTTAAGC.......................................................................................................................................................................................................	28	8	7.88	63	0	0	21	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	1	12	12	0	0	0	0	1	0	1	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGATT-----------------------------GAGGTCTG-GTGATTGA.........................................	23	15	7.67	115	0	0	0	0	4	8	2	3	5	5	20	0	2	0	0	0	0	0	0	0	12	0	0	3	5	2	8	6	3	2	0	4	1	1	2	4	8	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTG-GTGATTGAGGAGGATG.................................	20	15	6.87	103	2	0	3	0	1	6	6	3	1	0	2	1	6	0	0	0	0	0	0	0	1	0	0	4	6	1	9	0	20	5	2	1	6	0	2	3	1	3	1	4	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0
...........................................................................................................................................................................................................................................................................................................................................................TTTGTTGAAAATG-----------------TATGCTTTCTA........................................................................................................................................................	24	7	6.43	45	0	0	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	4	8	0	1	1	0	4	5	0	1	7	1	4	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGATT-----------------------------GAGGTCTG-GTGATTGAGGA......................................	26	15	5.73	86	0	0	2	0	0	1	0	1	5	1	15	2	3	3	0	0	0	0	0	0	1	0	0	1	1	1	7	6	2	1	0	3	4	2	4	5	8	5	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGTTCCTCCCATAGGTG----------------------CTCGATT............................................................................................	28	8	5.63	45	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	12	0	3	0	0	0	11	0	0	12	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................TCTAGTTCCTCCCATAGGTG----------------------CTCGATC............................................................................................	27	8	5.63	45	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	1	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	38
...............................................................................................................................................................................................................................................................................................................................................................................................................TCTAGTTCCTCCCATAGGTG----------------------CTC................................................................................................	23	8	5.50	44	0	0	11	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	2	0	1	1	4	1	5	0	3	1	0	3	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGATT-----------------------------GAGGTCTG-GTGATTGAGG.......................................	25	15	5.20	78	0	0	0	0	1	2	1	4	6	2	6	1	7	5	0	0	0	0	0	0	3	0	0	0	2	1	5	7	1	3	0	2	6	0	1	2	4	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
.........................................................................................................................................................................................................................................................................................................................CCACTCTTCCATTAGGGCTTCTTTAA.........................................................................................................................................................................................................	26	9	5.00	45	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	14	6	1	1	0	0	1	0	1	4	2	3	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................TTGTTGAAAATG-----------------TATGCTTTCTAAGC.....................................................................................................................................................	26	7	4.86	34	0	0	28	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................TTGAAAATG-----------------TATGCTTTCTAAGCC--T.................................................................................................................................................	25	7	4.00	28	0	0	1	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	3	3	2	0	1	0	6	0	0	5	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................TCCCATAGGTG----------------------CTCGATTGGATT-----------------------------GAGG......................................................	27	8	3.88	31	0	0	0	0	0	0	0	2	1	0	0	0	3	0	0	0	0	0	0	0	0	0	0	2	0	3	1	3	2	3	0	1	0	0	3	3	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGTTCCTCCCATAGGT..........................................................................................................................	20	10	3.70	37	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	5	2	0	5	0	7	1	3	0	3	0	0	4	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................TCTAGTTCCTCCCATAGGTG----------------------CTCGATTGGAT........................................................................................	31	8	3.63	29	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	27
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGATT-----------------------------GAGGTCTG-GTGATTGAG........................................	24	15	3.60	54	0	0	0	0	2	4	2	3	0	2	5	0	1	0	0	0	0	0	0	0	2	0	0	0	2	2	2	2	4	3	3	4	4	1	0	1	3	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................TTGTTGAAAATG-----------------TATGCTTTCTAAGCC--TT................................................................................................................................................	29	7	3.57	25	0	0	21	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTCTG-GTGATTGAGGAGGATGT................................	25	15	3.53	53	0	0	3	1	0	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	0	0	0	1	1	20	0	8	2	1	1	1	0	0	5	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGATT-----------------------------GAGGTCTG-GTGATTG..........................................	22	15	3.33	50	0	0	0	0	0	9	1	2	1	2	0	0	1	0	0	0	0	0	0	0	0	0	0	2	0	1	0	3	4	6	1	5	1	0	0	3	2	2	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGTTCCTCCCATAGGTG----------------------CT.................................................................................................	23	10	3.10	31	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	8	1	6	0	2	0	3	0	0	1	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................TCTAGTTCCTCCCATAGGTG----------------------CT.................................................................................................	22	10	3.00	30	0	0	4	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	3	0	5	1	7	0	0	1	0	2	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................CTAGTTCCTCCCATAGGTG----------------------CTCGAT.............................................................................................	25	8	2.88	23	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	16
................................................................................................................................................................................................................................................................................................................................................................................................................CTAGTTCCTCCCATAGGTG----------------------CTCGA..............................................................................................	24	8	2.88	23	0	0	20	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................CCACTCTTCCATTAGGGCTTCTTTAAG........................................................................................................................................................................................................	27	8	2.88	23	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	6	2	1	0	0	0	1	0	0	2	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGATT-----------------------------GAGGTCTG-GTGATTGAGGAG.....................................	27	15	2.73	41	0	0	0	0	2	1	1	0	0	0	2	0	11	1	0	0	0	0	0	0	0	0	0	0	1	3	4	2	2	0	0	2	1	0	0	1	2	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0
...........................................................................................................................................................................................................................................................................................................................................................TTTGTTGAAAATG-----------------TATGCTTTCTAAGCC--G.................................................................................................................................................	29	7	2.71	19	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	3	1	0	3	1	1	0	1	2	1	0	1	0	0	0	1	3	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................TCTAGTTCCTCCCATAGGTG----------------------C..................................................................................................	21	10	2.70	27	1	0	7	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	3	1	1	1	5	0	1	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................TTTGTTGAAAATG-----------------TATGCTTTCTAA.......................................................................................................................................................	25	7	2.57	18	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	4	0	1	0	1	0	2	0	1	4	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTCTG-GTGATTGAGGAGGATGTG...............................	26	15	2.47	37	0	0	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	3	0	14	0	4	1	0	1	1	0	0	3	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................CCACTCTTCCATTAGGGCTTCTTT...........................................................................................................................................................................................................	24	9	2.44	22	0	0	4	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	3	1	1	0	1	0	0	0	3	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTGAGGAGGATGTGGAAGAACA.......................	25	15	2.33	35	0	0	2	0	0	1	0	5	5	0	7	1	5	3	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGATT-----------------------------GAGGTCTG-GTGATT...........................................	21	15	2.13	32	0	0	0	0	1	1	1	1	0	0	1	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	1	0	7	4	1	1	2	1	1	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................TTGTTGAAAATG-----------------TATGCTTTCTAAGCC--C.................................................................................................................................................	28	7	2.00	14	0	0	1	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................TGTTGAAAATG-----------------TATGCTTTCTAAGCC--..................................................................................................................................................	26	7	2.00	14	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	4	0	0	0	0	0	1	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................CCACTCTTCCATTAGGGCTTCTT............................................................................................................................................................................................................	23	9	2.00	18	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	1	1	3	5	0	0	0	0	0	0	0	0	2	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCTG-GTGATTGAGGAGGATGTG...............................	24	15	2.00	30	0	0	0	0	0	0	0	3	0	2	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	1	1	2	2	7	0	1	0	1	0	1	2	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................TTTCTAGTTCCTCCCATAGGTG----------------------CTCGA..............................................................................................	27	8	2.00	16	0	0	4	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	1	0	0	1	2	0	1	2	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTCTG-GTGATTGAGGAGGATG.................................	24	15	1.87	28	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	1	0	0	0	1	0	9	0	7	2	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.....................................................................................................................................................................................................................................................................................................................................................TCAGTCTTTGTTGAAAATG-----------------TATGC..............................................................................................................................................................	24	6	1.83	11	0	0	0	0	0	1	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	1	0	0	0	0	2	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------------GAGGTCTG-GTGATTGAGGAGG....................................	22	15	1.80	27	0	0	1	0	0	1	1	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	3	1	5	2	1	1	0	1	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------------GAGGTCTG-GTGATTGAGGAG.....................................	21	15	1.73	26	0	0	0	0	0	3	4	3	1	3	1	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	1	0	1	3	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGTTCCTCCCATAGGTG----------------------T..................................................................................................	22	10	1.70	17	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	3	0	0	0	1	0	0	4	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------------GAGGTCTG-GTGATTGAGGAGGATG.................................	25	15	1.67	25	0	0	1	0	0	2	0	0	3	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	1	3	2	3	0	0	2	1	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTCCCATAGGTG----------------------CTCGA..............................................................................................	20	8	1.63	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	1	0	0	0	1	0	0	7	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTG-GTGATTGAGGAGGATGTGGAAGA..........................	27	15	1.60	24	0	0	1	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	4	0	5	1	2	0	1	0	0	0	1	2	0	3	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................CCACTCTTCCATTAGGGCTTCTTTA..........................................................................................................................................................................................................	25	9	1.56	14	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	2	1	1	0	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...............................................................................................................................................................................................................................................................................................................................................................................................................TCTAGTTCCTCCCATAGGT..........................................................................................................................	19	10	1.50	15	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	4	1	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
.........................................................................................................................................................................................................................................................................................................................................................................................................................CCCATAGGTG----------------------CTCGATTGGATT-----------------------------GAGGTC....................................................	28	8	1.50	12	0	0	0	0	2	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTGAGGAGGATGTGGAAGAAC........................	24	15	1.47	22	0	0	0	0	1	1	1	5	2	2	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------------GAGGTCTG-GTGATTGAGGAGGATGT................................	26	15	1.47	22	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	3	3	2	3	0	4	0	0	1	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................TTGTTGAAAATG-----------------TATGCTTTCTAAG......................................................................................................................................................	25	7	1.43	10	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	0	0	0	1	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................CCCATAGGTG----------------------CTCGATTGGATT-----------------------------GAGG......................................................	26	8	1.38	11	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	1	1	1	1	1	0	0	0	1	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................CCATAGGTG----------------------CTCGATTGGATT-----------------------------GAGGTC....................................................	27	8	1.38	11	0	0	0	0	0	0	1	0	2	0	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGTTCCTCCCATAGGTG----------------------C..................................................................................................	22	10	1.30	13	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	1	0	3	0	0	1	2	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................TTGAAAATG-----------------TATGCTTTCTAAGCC--TT................................................................................................................................................	26	7	1.29	9	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	1	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................TTGAAAATG-----------------TATGCTTTCTAAGCC--TTT...............................................................................................................................................	27	7	1.29	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	4	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................TG----------------------CTCGATTGGATT-----------------------------GAGGTCTG-GTGA.............................................	26	11	1.27	14	0	0	0	0	0	0	0	0	1	1	1	0	1	0	0	0	0	0	0	0	1	0	0	1	0	1	0	1	1	0	0	3	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................CCATAGGTG----------------------CTCGATTGGATT-----------------------------GAGG......................................................	25	8	1.25	10	0	0	1	0	0	0	0	0	3	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................TCTAGTTCCTCCCATAGGTG----------------------CTCGAA.............................................................................................	26	8	1.25	10	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................CCCATAGGTG----------------------CTCGATTGGATT-----------------------------GAGGT.....................................................	27	8	1.25	10	0	0	0	0	0	0	2	0	0	0	1	0	1	1	0	0	0	0	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................TTTTTCTAGTTCCTCCCATAGGTG----------------------T..................................................................................................	25	10	1.20	12	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	1	3	1	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-----------------------------GAGGTCTG-GTGATTGAGGAGGATG.................................	26	15	1.20	18	0	0	2	0	0	1	0	0	3	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	1	0	0	2	0	2	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................TCTAGTTCCTCCCATAGGTG----------------------T..................................................................................................	21	10	1.20	12	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	3	0	4	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------------GAGGTCTG-GTGATTGAGGAGGA...................................	23	15	1.20	18	0	0	2	0	0	1	0	1	2	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	1	3	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTCTAGTTCCTCCCATAGGTG----------------------T..................................................................................................	26	10	1.20	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	2	3	1	0	1	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTG-GTGATTGAGGAGGATGTG...............................	21	15	1.13	17	0	0	1	0	0	0	0	1	6	0	1	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	2	0	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATT-----------------------------GAGGTCTG-GTGATTGAGG.......................................	24	15	1.13	17	0	0	0	0	0	0	0	0	0	3	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	1	2	1	1	0	1	2	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...............................................................................................................................................................................................................................................................................................................................................................................................................TCTAGTTCCTCCCATAGGTG----------------------CTCGAC.............................................................................................	26	8	1.13	9	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5
...............................................................................................................................................................................................................................................................................................................................................................................................................TCTAGTTCCTCCCATAGGTG----------------------...................................................................................................	20	10	1.10	11	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	1	2	0	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTCTAGTTCCTCCCATAGGTG----------------------C..................................................................................................	26	10	1.10	11	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	1	1	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................TG----------------------CTCGATTGGATT-----------------------------GAGGTCTG-GTG..............................................	25	11	1.09	12	0	0	0	0	1	0	0	1	3	1	1	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTG-GTGATTGAGGAGGAT..................................	19	15	1.07	16	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	2	0	1	0	2	1	0	0	1	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTGAGGAGGATGTGGAAGAACAT......................	26	15	1.00	15	0	0	0	0	0	0	0	8	1	1	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................CCACTCTTCCATTAGGGCTTCT.............................................................................................................................................................................................................	22	9	1.00	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	3	1	1	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................GCTCAGTCTTTGTTGAAAATG-----------------TATGC..............................................................................................................................................................	26	6	1.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-----------------------------GAGGTCTG-GTGATTGAGGAG.....................................	22	15	1.00	15	0	0	0	0	0	1	0	2	2	1	4	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................TCAGTCTTTGTTGAAAATG-----------------TATGCTTTC..........................................................................................................................................................	28	3	1.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................TCTAGTTCCTCCCATAGGTG----------------------CTCGATTGGATC-----------------------------..........................................................	32	8	1.00	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------------GAGGTCTG-GTGATTGAGGAGGAT..................................	24	15	1.00	15	0	0	0	0	0	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	2	0	4	3	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGTTCCTCCCATAGGTG----------------------CTCGATC............................................................................................	28	8	1.00	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	4	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-----------------------------GAGGTCTG-GTGATTGAGGAGG....................................	23	15	0.93	14	0	0	0	0	0	0	0	0	4	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	1	0	0	1	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATT-----------------------------GAGGTCTG-GTGATTGAGGAG.....................................	26	15	0.93	14	0	0	0	0	0	1	0	0	0	0	1	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	2	0	3	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................GGTG----------------------CTCGATTGGATT-----------------------------GAGGTCTG-G................................................	25	11	0.91	10	0	0	1	0	0	0	0	0	3	0	1	0	2	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGTTCCTCCCATAGGTG----------------------CTCGATA............................................................................................	28	8	0.88	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	1	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................TCTAGTTCCTCCCATAGGTG----------------------CTCGATA............................................................................................	27	8	0.88	7	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2
...............................................................................................................................................................................................................................................................................................................................................................................................................TCTAGTTCCTCCCATAGGTG----------------------CTCGATTGG..........................................................................................	29	8	0.88	7	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTCTG-GTGATTGAGGAGG....................................	21	15	0.87	13	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	5	0	5	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................TTTGTTGAAAATG-----------------TATGCTTTCT.........................................................................................................................................................	23	7	0.86	6	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................TCAGTCTTTGTTGAAAATG-----------------TATGCT.............................................................................................................................................................	25	6	0.83	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTCTG-GTGATTGAGGAGGA...................................	22	15	0.80	12	0	0	0	0	0	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	4	2	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................TTTTTCTAGTTCCTCCCATAGGTG----------------------C..................................................................................................	25	10	0.80	8	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTGCCACTCTTCCATTAGGGCT................................................................................................................................................................................................................	26	8	0.75	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	3	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGATT-----------------------------GAGGTCTG-GTGAT............................................	20	15	0.73	11	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	3	0	0	1	0	0	1	0	0	0	0	1	0	0	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATT-----------------------------GAGGTCTG-GTGATTGAGGA......................................	25	15	0.73	11	0	0	0	0	0	0	0	0	1	0	3	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGATT-----------------------------GAGGTCTG-GTGA.............................................	19	15	0.73	11	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTCTAGTTCCTCCCATAGGT..........................................................................................................................	24	10	0.70	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	1	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................TCAGTCTTTGTTGAAAATG-----------------TATGCTT............................................................................................................................................................	26	6	0.67	4	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATT-----------------------------GAGGTCTG-GTGATTGA.........................................	22	15	0.67	10	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	2	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTG-GTGATTGAGGAGGATGTGGAAGAACA.......................	30	15	0.67	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	3	1	0	0	0	0	1	1	0	0	0	0	0	0	0	2	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-GTGATTGAGGAGGATGTGGA.............................	22	15	0.67	10	0	0	0	0	1	0	0	0	1	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	1	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-----------------------------GAGGTCTG-GTGATTGAGGAGGAT..................................	25	15	0.67	10	0	0	0	0	0	0	0	0	1	0	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------------GAGGTCTG-GTGATTGAGGA......................................	20	15	0.67	10	1	0	0	0	0	0	0	2	0	2	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATT-----------------------------GAGGTCTG-GTGATTGAG........................................	23	15	0.67	10	0	0	1	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	0	1	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................TCAGTCTTTGTTGAAAATG-----------------TATG...............................................................................................................................................................	23	6	0.67	4	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................CACTCTTCCATTAGGGCTTCTTTAAGC.......................................................................................................................................................................................................	27	12	0.67	8	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	3	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................TCTAGTTCCTCCCATAGGTG----------------------CTCGC..............................................................................................	25	8	0.63	5	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTGCCACTCTTCCATTAGGGCT................................................................................................................................................................................................................	25	8	0.63	5	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................TAGTTCCTCCCATAGGTG----------------------CTCGA..............................................................................................	23	8	0.63	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGTTCCTCCCATAGG...........................................................................................................................	19	10	0.60	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	1	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCTG-GTGATTGAGGAGGATGT................................	23	15	0.60	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	1	4	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------------GAGGTCTG-GTGATTGAGG.......................................	19	15	0.60	9	0	0	0	0	1	1	0	2	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGTTCCTCCCATAGGTG----------------------...................................................................................................	21	10	0.60	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	2	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTCTG-GTGATTGAGGAG.....................................	20	15	0.60	9	0	0	0	0	0	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................ACTCTTCCATTAGGGCTTCTTTAAGC.......................................................................................................................................................................................................	26	12	0.58	7	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................GTTGAAAATG-----------------TATGCTTTCTAAGCC--T.................................................................................................................................................	26	7	0.57	4	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................TTGAAAATG-----------------TATGCTTTCTAAGCC--..................................................................................................................................................	24	7	0.57	4	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................TGTTGAAAATG-----------------TATGCTTTCTAAGC.....................................................................................................................................................	25	7	0.57	4	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................TTGTTGAAAATG-----------------TATGCTTTCTA........................................................................................................................................................	23	7	0.57	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................TGTTGAAAATG-----------------TATGCTTTCTAAG......................................................................................................................................................	24	7	0.57	4	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................TTTGTTGAAAATG-----------------TATGCTTTCTAAGCC--C.................................................................................................................................................	29	7	0.57	4	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGATT-----------------------------GAGGTCTG-GTGATTGAGC.......................................	25	15	0.53	8	0	0	0	0	0	2	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTG-GTGATTGAGGAGGA...................................	18	15	0.53	8	0	0	1	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTGAGGAGGATGTGGAAG...........................	21	15	0.53	8	0	0	0	0	0	0	0	1	3	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTG-GTGATTGAGGAGGATGTGGAAT...........................	26	15	0.53	8	0	0	1	0	0	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-GTGATTGAGGAGGATGTG...............................	20	15	0.53	8	0	0	0	0	0	1	0	1	2	1	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTG-GTGATTGAGGAGGATGTC...............................	22	15	0.53	8	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
................................................................................................................................................................................................................................................................................................................................................................................................................CTAGTTCCTCCCATAGGTG----------------------CTCG...............................................................................................	23	8	0.50	4	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
..............................................................................................................................................................................................................................................................................................................................................................................................................................AGGTG----------------------CTCGATTGGATT-----------------------------GAGGTCTG-G................................................	26	8	0.50	4	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................TAGGTG----------------------CTCGATTGGATT-----------------------------GAGG......................................................	22	8	0.50	4	0	0	0	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................TCCCATAGGTG----------------------CTCGATTGGATT-----------------------------GAG.......................................................	26	8	0.50	4	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGTTCCTCCCATAGGTG----------------------CTCGAA.............................................................................................	27	8	0.50	4	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTCCCATAGGTG----------------------CTCGATTGGAT........................................................................................	26	8	0.50	4	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGTTCCTCCCATAGGTG----------------------CTCGC..............................................................................................	26	8	0.50	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................TAGGTG----------------------CTCGATTGGATT-----------------------------GAGGT.....................................................	23	8	0.50	4	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.........................................................................................................................................................................................................................................................................................................................CCACTCTTCCATTAGGGCTTCTTTAAGCT......................................................................................................................................................................................................	29	8	0.50	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................TTTCTAGTTCCTCCCATAGGTG----------------------CTCG...............................................................................................	26	8	0.50	4	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-GTGATTGAGGAGGATGTGGAAG...........................	24	15	0.47	7	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-GTGATTGAGGAGGATGTGG..............................	21	15	0.47	7	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................CCACTCTTCCATTAGGGCT................................................................................................................................................................................................................	19	9	0.44	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................CCACTCTTCCATTAGGGCTTC..............................................................................................................................................................................................................	21	9	0.44	4	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................TTGAAAATG-----------------TATGCTTTCTAAGCC--TTTT..............................................................................................................................................	28	7	0.43	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................ACTCTTCCATTAGGGCTTCTTTAAG........................................................................................................................................................................................................	25	12	0.42	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-----------------------------GAGGTCTG-GTGATTGAGGAGGA...................................	24	15	0.40	6	0	0	0	0	0	0	0	0	1	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGATT-----------------------------GAGGTCTG-GTGATTGAGG.......................................	26	13	0.38	5	0	0	0	0	1	0	0	0	0	0	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................TCTAGTTCCTCCCATAGGTG----------------------CTCGAG.............................................................................................	26	8	0.38	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2
.............................................................................................................................................................................................................................................................................................................................................................................................................................TAGGTG----------------------CTCGATTGGATT-----------------------------GAGGTC....................................................	24	8	0.38	3	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................TTTTTCTAGTTCCTCCCATAGGTG----------------------CTC................................................................................................	27	8	0.38	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................TCTAGTTCCTCCCATAGGTG----------------------CTCGAAA............................................................................................	27	8	0.38	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

AATGTAGTTATTTAA-A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAAA----ATTATTTTAAAATTTTTTTTTTATATATATATGTGC-TATGTTGTATTCTTAAAACAAAATATTGTATATTTTTT--TTTTATTTTAATT-----------------TTTTTTTT-TAATTTT-CTTTTAACATA--------------------------------------------------------------------------------------------------------------------------------------A	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
...............................................................................................................................................................................................................................................................................................................TGC-TATGTTGTATTCTTAAAACAAAATA................................................................................................................................................................................................................	28	18	0.17	3	3	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................TGC-TATGTTGTATTCTTAAAACA.....................................................................................................................................................................................................................	23	18	0.11	2	2	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................TCTTAAAACAAAATATTGTATATTTT.....................................................................................................................................................................................................	26	10	0.10	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................TGTATTCTTAAAACAAAATATTG.............................................................................................................................................................................................................	23	16	0.06	1	1	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................GC-TATGTTGTATTCTTAAAACAAAATA................................................................................................................................................................................................................	27	18	0.06	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................TGC-TATGTTGTATTCTTAAAACAAAATAT...............................................................................................................................................................................................................	29	18	0.06	1	1	0	0	0	0	0

droGri2

GCAATTTTATTTTAT-ATTGTTT--------------------------------------------------------------TAATTTTCATAATTAAC-----------------------------------------------------------------------------------ACTT-CCTTTTTAATAAATAT-------------------------AAAACTCTCAATA---------------TAATAAT----AAAA-TGGCAGTTATACCATATAA-TTTTATAGTAATTATACCACATAATATCTTATCGAATTTCTT------ACAA---CATTATGAAG-----------------CCCGT------------TTTATATAAGTGGAAAATACGAATT----------------------TTTGAAA----C-----------------------------GAAATCGAGAAATTTACGT-TTC-------------------------AAGTT----T	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

-14.1	-14.0	-13.9	-13.8

dsi_21629

2l:21195667-21195816 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads