ID:

dsi_21394

 Coordinate:

x:6557665-6557814 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.0 -22.9 -22.7

Flybase annnotation

exon [x_6557161_6557664_+]; CDS [x_6557161_6557664_+]; intron [x_6557665_6558159_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GGAGCGGGCCAGGAAATCCCTCAGATACTTCCGTGGACTGCCCAAAAAAGGTGAGTCCTTAACTGAAACGCTAAGAGGAATCAGGGAATACTTAACCTTTGGTTCCTATGGGAAATCTGTTTAAATACACTTAATCATTGACTAACACAATACAAAATAATCACACAATCTGGTCAGCAATTTAAGACTATTAGTGAATTAAATTAAGTGAGTGGGTGGCTGAAAAGTCCGATCCTATGGAGCTAATGTA
**************************************************..................((((((.(((((((((((..........)))))))))))..........(((......)))(((((...(((((((..........................)))))))....)))))....))))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M053
female body
 M025
embryo
 M023
head
 O002
Head
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
.......................GATACTTCCGTGGACTGCC................................................................................................................................................................................................................ 19 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
............................................................................................................................ATACACTTAATCATTGACT........................................................................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
......................AGATACTTCCGTGGACTGCCC............................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................................TGGACTGCCCAAAAAAGGTGA.................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.......................GATACTTCCGTGGACTGCCC............................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........CAGGAAATCCCTCAGATACTTCCTGG....................................................................................................................................................................................................................... 26 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........GGAAATCCCTCAGATACTTCCGT........................................................................................................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........................CTTCCGTGGACTGCCCAAAAAAGAGGT.................................................................................................................................................................................................... 27 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......GGCCAGGAAATCCCTCAGATACTT............................................................................................................................................................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
....................TCAGATACTTCCGTGGACTGCC................................................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................TACTTCCGTGGACTGCCC............................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................GATACTTCCGTGGACTGCCCAAAAAAGA....................................................................................................................................................................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................AATAATCACACAATCTGGTCAGCAAA..................................................................... 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................TTCCGTGGACTGCCCAAAAAAGAGGT.................................................................................................................................................................................................... 26 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0
........................ATACTTCCGTGGACTGCC................................................................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................ATACACTTAATCATTGACTA.......................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
...............ATCCCTCAGATACTTCCGTGGACT................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................AGGTCCGGTCCTATGG.......... 16 2 20 0.70 14 0 0 0 0 0 0 14 0 0 0
.....................................................................................................................................ATCATTGACTTACAAAAGAC................................................................................................. 20 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TGAGTTAGTGGCTGAAAA........................ 18 2 8 0.13 1 0 0 0 0 0 0 0 1 0 0
..............................................................................................................................................................................................TTCGTATATTAAATTAAGTGA....................................... 21 3 13 0.08 1 0 0 0 0 0 0 0 0 1 0
..................................GGACTGCCCAAAAAAGAGGT.................................................................................................................................................................................................... 20 3 16 0.06 1 0 1 0 0 0 0 0 0 0 0
....................................................................................................GGTTCCTAAGGGAAGCCT.................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1
GGTGCGGACCAGGGAATCC....................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

CCTCGCCCGGTCCTTTAGGGAGTCTATGAAGGCACCTGACGGGTTTTTTCCACTCAGGAATTGACTTTGCGATTCTCCTTAGTCCCTTATGAATTGGAAACCAAGGATACCCTTTAGACAAATTTATGTGAATTAGTAACTGATTGTGTTATGTTTTATTAGTGTGTTAGACCAGTCGTTAAATTCTGATAATCACTTAATTTAATTCACTCACCCACCGACTTTTCAGGCTAGGATACCTCGATTACAT
**************************************************..................((((((.(((((((((((..........)))))))))))..........(((......)))(((((...(((((((..........................)))))))....)))))....))))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body		 O002
Head
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
........................................GGGTTTTTTCCACTCAGGAAT............................................................................................................................................................................................. 21 0 1 4.00 4 4 0 0 0 0 0
........................................GGGTTTTTTCCACTCAGGAA.............................................................................................................................................................................................. 20 0 1 4.00 4 3 1 0 0 0 0
..........................................................................................................................................................................................................................CGACTTTTCAGGCTAGGATAC........... 21 0 1 3.00 3 3 0 0 0 0 0
.........................................GGTTTTTTCCACTCAGGAATT............................................................................................................................................................................................ 21 0 1 3.00 3 3 0 0 0 0 0
............CTTTAGGGAGTCTATGAAGGC......................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
................AGCGAGTCTATGAAGGCAC....................................................................................................................................................................................................................... 19 1 1 1.00 1 0 1 0 0 0 0
............................TAGGCACCTGACGGGTTTTTTC........................................................................................................................................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0
..........................................................................................................................................ACTGATAGTGTTATGTTCT............................................................................................. 19 2 1 1.00 1 0 0 0 1 0 0
......................................................................................................................................................................................................................CCACCGACTTTTCAGGCTAGGA.............. 22 0 1 1.00 1 0 0 1 0 0 0
................................................................................................................................................................................................................................TTCAGGCTAGGATACCTCGAT..... 21 0 1 1.00 1 0 0 1 0 0 0
................................................TCCACTCAGGAATTGACTTTG..................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................TGAGTTGGAAACCAAGTA............................................................................................................................................... 18 2 2 0.50 1 0 0 0 0 1 0
...............................................................................................................................................ATGTGTTTTGTTTTATTAG........................................................................................ 19 2 20 0.05 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:6557615-6557864 + dsi_21394 G-GAGCGGGCCAGGAAATCCCTCAGATACTTCCGTGGACTGCCCAAAAAAGGTGAGTCC----------------------T-----TAACT---------GAAA---C------------------------------------------------------------------------------GCT----AAGAGGAATCAGGGAATACTTAACCTTTGGTT-CCTATGG-------------------------------------------------------------------------------------------------------------------------GAAATCTGTTTAAATACAC-TTAATCATTGACTAACACAATACAAAATAAT------------------------CACACAATCTGGTCAGCAATTTAAGACTATT---------AGTGAATT-AAATTAAGTGAGTG--GGTGGCTGAAAAGTCCG--------------------ATCC--------TATGGAGCTAATGTA
droSec2 scaffold_24:185067-185316 + G-GAGCGGGCCAGGAAATCCCTCAGATACTTCCGTGGACTGCCCAAAAAAGGTGAGTCC----------------------T-----TAACC---------GAAA---G------------------------------------------------------------------------------GCT----AAGAGGAACCAGGGAATACTTAACCTTTGGAT-CCTATGG-------------------------------------------------------------------------------------------------------------------------GAAATTTGATTAAATACAC-TTAATCACTGACTAACACAATACAAAATAAT------------------------CACACAATCTGGTCAGCAATTTAAGACTATT---------AGTGAATT-AAATTGAGTGAGTG--GGTGGCTGAAAAGTCAG--------------------ATTC--------TATGGAGCTAATGTA
dm3 chrX:6964917-6965156 + G-GAGCGGGCCAGGAAATCCCTCAGATACTTCCGCGGACTGCCGAAAAAAGGTGAGTCC----------------------T-----TA----------------------------------------------------------------------------------------------------------AGAGGCATCAGGGAATACTTAACCTTTGGATCCCTATGG-------------------------------------------------------------------------------------------------------------------------GAAATCTGATTACATACAC-TTAATCATTGACTAGCACAATACTAAATAAT------------------------CAAACAATCTGGTCAGCAATTTAAGACTATT---------AGTGAATT-A-ATTAAGTGAGTGAGGGTGGCTAAAAAGTCCG--------------------ATCC--------TATGGAGCTAATGTA
droEre2 scaffold_4690:15875649-15875868 + G-GAGCGGGCCAGGAGATCCCTCAGATACTTCCGTGGACTGCCCAAAAAAGGTGAGTTC----------------------C-----T-------------------------------------------------------------------------------------------------------------------------------------TGTGT-TCTACGG-------------------------------------------------------------------------------------------------------------------------GAAGTCTGATTAGATACAC-CTAATCGTTGACTAATACAATACAAAGTAAT------------------------CACACAATCTGGTCAGCAATCCCAGACTATTAAGACTATTAGTGAATT-AAATGAAGTGAGTG--GGTGGCTGAATAGTGCG--------------------ATCC--------TACAGAGCTAATGTC
droYak3 X:14390496-14390759 - G-GAGCGGGCCAGGAAGTCACTTCGATACTTCCGTGGACTGCCCAAAAAAGGTGAGTCC----------------------T-----TAATAAATAGAT------------------------------------------------------------------------AGATAACTAGATAAGCGTTACTAGAGAGTTAGCAGGAAATAT--------CGTTT-GCTATGG-------------------------------------------------------------------------------------------------------------------------AAGATCTAATTGAATACAC-TTAATCGCTGACTCATACAATACAAAATAAT------------------------CACACAATCTGGACAGCAATTTGCGACTATT---------AGTGAGTT-AAATGAAGTGAGTG--GGTGGCTGAATAGTTCG--------------------ACTT--------TATAGAGCTAATGTC
droEug1 scf7180000409095:303921-303987 + G-GAGCGAGCTAGAAAATCACTCAGATATTTCCGCGGCCTGCCCAAGAAAGGTTAGTCC----------------------T-----TGGCT---------AAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000301760:1621495-1621862 - G-GAGCGGGCCAGGTCATCGCTCAGGTACTTCCGCGGCCTGCCCAAGAAAGGTGAGCCC----------------------C-----CCCCT---------GTAGAAAATAATG------G----TGGTTTTTAA----------------TTGATTTTTTTTACAT-----------------G----------------------------------------------ATATTACCCAGTTTAAAATGTTAAGTTAAAGTTTATCATTAAGAGAAATGTTGGGCAACTTTAAATTTACCAGAAAACTTTTAGTAAGACTTTCAGTTCTTCGGTTTGCAGGCCAATGTAATTATAAATCTGATAAGATCCACCTTAATCGTTGACTAATAAAATACAAAGTAAT------------------------CAAGCAATCTGAGCAGCAATTTGAAGATATTAG-------TGTGACTA--------------------------GGAGTCCGGCAATCCATTTGTAAATTAGATAC--------TATAGAGCTAATGTC
droTak1 scf7180000415873:609544-609716 + A-TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-------------------------------------------------------------------------------------------------------------------------AAAATCTGATAAGATTCAC-CTAATCGTTGACTAATAAAATACAAAATAAT------------------------CAAGCAATCTGGGCAGCAATTTGAAGACATTAA-------AGTGACTAAAAATTAAGTGAGTG--GGTG-TAGAAAAGTCAGGCAATCCATTAGGAAATTAGATATGTGGGTACTATAAATCTAATGTC
droEle1 scf7180000491023:852807-852955 - C-TG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGA-------------------------------------------------------------------------------------------------------------------------TTACTCAGATTAGATAAAC-AAAATCAACGACAAAT----------GTAAT------------------------CAAGCAATCAGGGCTGAAATTTTAAGCCATTAA-------AGTGACTA-AAATTAAGTGT----------TAAAAAAATCCGACAATCCATTTGTGAATTAGGAAC--------TAGAGAGCTAATGTC
droRho1 scf7180000779514:347556-347896 - G-GAGCGGGCCAGGAAGTCCCTCAGATACTTCCGCGGTCTGCCCAAAAAGGGTAAGTCT----------------------T-----TAAAT---------ATTAATAATAATATAATAGGGGAATTTTTTTTAATTTTGAAATACGTTTTTTCATCTTTTTCACATTTATAAATAACTGGC-AA----------------------------------------------ACATGTCTCA---------------------------------------------CTTCCTTAAA----------AAC-------AAATTTCTCCATTTT----TTTGTG---------------------AGCTAAATTAAC-TTAATCAACCATTAACAAAATACAAAATCAT------------------------CTAGCAATCTGAGCTGCAATTTTAAGAAATTAA-------AGTGACTA--A-----ATGAGTTGGGGCGGTGGAAAACTCTGACAATCCATTTGGAAATCAGATAC--------TATTCAGCTAATGCC
droFic1 scf7180000453927:1039816-1040050 - G-GAGCGGGCCAGGAAGTCCCTCAGATACTTCCGTGGTCTGCCCAAGAAAGGTGAGTCA----------------------T-----GACCC---------GAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATCAGATTAGATAGAT-AGATTCGCTGGCCAATGCAATACAAAACAAT------------------------CCAGCAAACTGGACAGCAGTTAAATGCCATTAA-------AGTGAATT-AAATTAAGTGATTG--CTTGGCAGAAAAGTCCGCTCATCCATTTGGAAATTCGATAC-TATAAAGTATGAAGTTAATGTC
droKik1 scf7180000302230:59334-59554 - A-GAGCGGGCCAGGACATCGCTCAGATACTTCCGAGGGCTGCCAAAGAAGGGTGAGTGAGCGATAATCGCCATGCAGGTCAATTCATTTACATTTAGATTGGAAA---A------------------------------------------------------------------------------CCA----GGGGGGGGGCGAGCAATACTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCATAGTAATCAATGGGTGACTCATTTTTCATTTCTCTCAGTGTGGTCAGCAATTTGTGGCCATCGA-------ATAGAGAC-TTTTTAAGTGGGTG--G---------------------------------------------------------------
droAna3 scaffold_13117:2312680-2312738 + G-GAGCGGGCCAGGAAGTCCTTGCGATACTTCCGTGGTTTGCCCAAAAACGGTGAGTCT----------------------T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396696:809088-809143 - G-GATCGGGCCAGGAAGTCGTTGCGATACTTCCGTGGATTGCCCAAAAATGGTGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 XL_group1a:6376645-6376705 + C-GAACGAGCCAGGAAATCGCTAAGATACTTCCGGGGCCTGCCGAAGAAAGGTGAGTTC----------------------T-----TA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_25:946246-946306 - C-GAACGAGCCAGGAAATCGCTAAGATACTTCCGGGGCCTGCCAAAGAAAGGTGAGTTC----------------------C-----TA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004590:3003216-3003270 - C-GAGAAGGCACGCAAATCGTTGAGATATTTCCGTGGCTTGTCGACAAAAGGTGAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12823:189919-189996 + G-GAAGAGGCTAAGAAGTCGTTGAACTATTTTCGTGGGCTGGATAAGTCGCGTAAGTCA----------------------A-----TATAT---------TAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAAAGAAA-----------------------------------------------------
droMoj3 scaffold_6496:39933-39988 + G-GAGGAGGCTATGAAGTCACTTAATTATTTTCGTGGACTGGACAAGTTACGTGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14853:6676836-6676892 + TCGAGTTGGCGCGCCGATCGTTGCGCTACTTTCGCGGACTGCGGAGCAAGGGTTAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
G-GAGCGGGCCAGGAAATCCCTCAGATACTTCCGTGGACTGCCCAAAAAAGGTGAGTCC----------------------T-----TAACT---------GAAA---C------------------------------------------------------------------------------GCT----AAGAGGAATCAGGGAATACTTAACCTTTGGTT-CCTATGG-------------------------------------------------------------------------------------------------------------------------GAAATCTGTTTAAATACAC-TTAATCATTGACTAACACAATACAAAATAAT------------------------CACACAATCTGGTCAGCAATTTAAGACTATT---------AGTGAATT-AAATTAAGTGAGTG--GGTGGCTGAAAAGTCCG--------------------ATCC--------TATGGAGCTAATGTASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................GATACTTCCGTGGACTGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.00303000000000000000
................................................................................................................................................................................................................................................................................................................................................................................ATACAC-TTAATCATTGACT...........................................................................................................................................................................1912.00202000000000000000
.......................AGATACTTCCGTGGACTGCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
..................................TGGACTGCCCAAAAAAGGTGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
........................GATACTTCCGTGGACTGCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
............GGAAATCCCTCAGATACTTCCGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
.......GGCCAGGAAATCCCTCAGATACTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
.....................TCAGATACTTCCGTGGACTGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
..........................TACTTCCGTGGACTGCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
........................GATACTTCCGTGGACTGCCCAAAAAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................AATAAT------------------------CACACAATCTGGTCAGCAAA.............................................................................................................2611.00100010000000000000
.........................ATACTTCCGTGGACTGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
................................................................................................................................................................................................................................................................................................................................................................................ATACAC-TTAATCATTGACTA..........................................................................................................................................................................2011.00100000100000000000
................ATCCCTCAGATACTTCCGTGGACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
droSec2
G-GAGCGGGCCAGGAAATCCCTCAGATACTTCCGTGGACTGCCCAAAAAAGGTGAGTCC----------------------T-----TAACC---------GAAA---G------------------------------------------------------------------------------GCT----AAGAGGAACCAGGGAATACTTAACCTTTGGAT-CCTATGG-------------------------------------------------------------------------------------------------------------------------GAAATTTGATTAAATACAC-TTAATCACTGACTAACACAATACAAAATAAT------------------------CACACAATCTGGTCAGCAATTTAAGACTATT---------AGTGAATT-AAATTGAGTGAGTG--GGTGGCTGAAAAGTCAG--------------------ATTC--------TATGGAGCTAATGTASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................................................................................................................................................CCTTTGGAT-CCTATGG-------------------------------------------------------------------------------------------------------------------------GAAA........................................................................................................................................................................................................2011.0011000
..........CAGGAAATCCCTCAGATACTTCCGTGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100
..............AAATCCCTCAGATACTTCCGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................AT------------------------CACACAATCTGGTCAGCAATT............................................................................................................2311.0011000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCTGGTCAGCAATTTAAG........................................................................................................2111.0011000
.......................AGATACTTCCGTGGACTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
.........................ATACTTCCGTGGACTGCCCAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATT-AAATTGAGTGAGTG--G...............................................................2111.0010100
...............AATCCCTCAGATACTTCCGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................AAT------------------------CACACAATCTGGTCAGCA...............................................................................................................2111.0010100
...................................................................................................................................................................................................................ACTTAACCTTTGGAT-CCTATGG-------------------------------------------------------------------------------------------------------------------------GA..........................................................................................................................................................................................................2411.0010010
............................................................................................................................................................................................CT----AAGAGGAACCAGGGAATAC..........................................................................................................................................................................................................................................................................................................................................................2111.0010100
dm3
G-GAGCGGGCCAGGAAATCCCTCAGATACTTCCGCGGACTGCCGAAAAAAGGTGAGTCC----------------------T-----TA----------------------------------------------------------------------------------------------------------AGAGGCATCAGGGAATACTTAACCTTTGGATCCCTATGG-------------------------------------------------------------------------------------------------------------------------GAAATCTGATTACATACAC-TTAATCATTGACTAGCACAATACTAAATAAT------------------------CAAACAATCTGGTCAGCAATTTAAGACTATT---------AGTGAATT-A-ATTAAGTGAGTGAGGGTGGCTAAAAAGTCCG--------------------ATCC--------TATGGAGCTAATGTASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................GCGGACTGCCGAAAAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100007000000000000200000000000000000000000000000000000000000000000000010000000000010000000000000000000000000000000000000001000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TACTTCCGCGGACTGCCGAAAAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000
.....................TCAGATACTTCCGCGGACTGCCGAAAAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CGCGGACTGCCGAAAAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
........................................................................................................................................................................................................................ACCTTTGGATCCCTATGG-------------------------------------------------------------------------------------------------------------------------GAA.........................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
........................................................................................A----------------------------------------------------------------------------------------------------------AGAGGCATCAGGGAATACTT........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGTGAGGGTGGCTAA.......................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
................................CGCGGACTGCCGAAAAAAGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GGGCCAGGAAATCCCTCAGATA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................GGACTGCCGAAAAAAGGTGAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GCGGGCCAGGAAATCCCTCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CTCAGATACTTCCGCGGACTGCCGAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................GCGGACTGCCGAAAAAAGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................CGGACTGCCGAAAAAAGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AGCGGGCCAGGAAATCCCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GATACTTCCGCGGACTGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AGATACTTCCGCGGACTGCCGAAAATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GATACTTCCGCGGACTGCCGAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACAATCTGGTCAGTT...............................................................................................................1890.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................GGACTGCCGAAAAAAGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
droEre2
G-GAGCGGGCCAGGAGATCCCTCAGATACTTCCGTGGACTGCCCAAAAAAGGTGAGTTC----------------------C-----T-------------------------------------------------------------------------------------------------------------------------------------TGTGT-TCTACGG-------------------------------------------------------------------------------------------------------------------------GAAGTCTGATTAGATACAC-CTAATCGTTGACTAATACAATACAAAGTAAT------------------------CACACAATCTGGTCAGCAATCCCAGACTATTAAGACTATTAGTGAATT-AAATGAAGTGAGTG--GGTGGCTGAATAGTGCG--------------------ATCC--------TACAGAGCTAATGTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAGACTATTAGTGAATT-AA..............................................................................2211.0010000010
........................GATACTTCCGTGGACTGCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
......GGGCCAGGAGATCCCTCAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
......................CAGATACTTCCGTGGACTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
..........................TACTTCCGTGGACTGCCCAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
...............GATCCCTCAGATACTTCCGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
.........................ATACTTCCGTGGACTGCCCAAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
.......GGCCAGGAGATCCCTCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
......................CAGATACTTCCGTGGACTGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
.................................GTGGACTGCCCAAAAAAGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000100
droYak3
G-GAGCGGGCCAGGAAGTCACTTCGATACTTCCGTGGACTGCCCAAAAAAGGTGAGTCC----------------------T-----TAATAAATAGAT------------------------------------------------------------------------AGATAACTAGATAAGCGTTACTAGAGAGTTAGCAGGAAATAT--------CGTTT-GCTATGG-------------------------------------------------------------------------------------------------------------------------AAGATCTAATTGAATACAC-TTAATCGCTGACTCATACAATACAAAATAAT------------------------CACACAATCTGGACAGCAATTTGCGACTATT---------AGTGAGTT-AAATGAAGTGAGTG--GGTGGCTGAATAGTTCG--------------------ACTT--------TATAGAGCTAATGTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............AGTCACTTCGATACTTCCGTGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.00303000000000
................GTCACTTCGATACTTCCGTGGACTGCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.00330000000000
..................CACTTCGATACTTCCGTGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00201000010000
.........................ATACTTCCGTGGACTGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG--------------------ACTT--------TATAGAGCTAATGT.2011.00101000000000
..............AAGTCACTTCGATACTTCCGTGGACTGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00110000000000
...................ACTTCGATACTTCCGTGGACTGCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGTG--GGTGGCTGAAT.....................................................1811.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................AAT------------------------CACACAATCTGGACAG.................................................................................................................1911.00101000000000
............................CTTCCGTGGACTGCCCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000
..................CACTTCGATACTTCCGTGGACTGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110000000000
.................................................................................................AT------------------------------------------------------------------------AGATAACTAGATAAGCGTTACT..............................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
............................CTTCCGTGGACTGCCCAAAAAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000000000
...............AGTCACTTCGATACTTCCGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.................................GTGGACTGCCCAAAAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000
...............AGTCACTTCGATACTTCCGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.......................CGATACTTCCGTGGACTGCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000
....GCGGGCCAGGAAGTCACTTCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000
.......................CGATACTTCCGTGGACTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000
droEug1
G-GAGCGAGCTAGAAAATCACTCAGATATTTCCGCGGCCTGCCCAAGAAAGGTTAGTCC----------------------T-----TGGCT---------AAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
G-GAGCGGGCCAGGTCATCGCTCAGGTACTTCCGCGGCCTGCCCAAGAAAGGTGAGCCC----------------------C-----CCCCT---------GTAGAAAATAATG------G----TGGTTTTTAA----------------TTGATTTTTTTTACAT-----------------G----------------------------------------------ATATTACCCAGTTTAAAATGTTAAGTTAAAGTTTATCATTAAGAGAAATGTTGGGCAACTTTAAATTTACCAGAAAACTTTTAGTAAGACTTTCAGTTCTTCGGTTTGCAGGCCAATGTAATTATAAATCTGATAAGATCCACCTTAATCGTTGACTAATAAAATACAAAGTAAT------------------------CAAGCAATCTGAGCAGCAATTTGAAGATATTAG-------TGTGACTA--------------------------GGAGTCCGGCAATCCATTTGTAAATTAGATAC--------TATAGAGCTAATGTCSizeHit CountTotal NormTotal
No Reads
droTak1
A-TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-------------------------------------------------------------------------------------------------------------------------AAAATCTGATAAGATTCAC-CTAATCGTTGACTAATAAAATACAAAATAAT------------------------CAAGCAATCTGGGCAGCAATTTGAAGACATTAA-------AGTGACTAAAAATTAAGTGAGTG--GGTG-TAGAAAAGTCAGGCAATCCATTAGGAAATTAGATATGTGGGTACTATAAATCTAATGTCSizeHit CountTotal NormTotal
No Reads
droEle1
C-TG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGA-------------------------------------------------------------------------------------------------------------------------TTACTCAGATTAGATAAAC-AAAATCAACGACAAAT----------GTAAT------------------------CAAGCAATCAGGGCTGAAATTTTAAGCCATTAA-------AGTGACTA-AAATTAAGTGT----------TAAAAAAATCCGACAATCCATTTGTGAATTAGGAAC--------TAGAGAGCTAATGTCSizeHit CountTotal NormTotal
No Reads
droRho1
G-GAGCGGGCCAGGAAGTCCCTCAGATACTTCCGCGGTCTGCCCAAAAAGGGTAAGTCT----------------------T-----TAAAT---------ATTAATAATAATATAATAGGGGAATTTTTTTTAATTTTGAAATACGTTTTTTCATCTTTTTCACATTTATAAATAACTGGC-AA----------------------------------------------ACATGTCTCA---------------------------------------------CTTCCTTAAA----------AAC-------AAATTTCTCCATTTT----TTTGTG---------------------AGCTAAATTAAC-TTAATCAACCATTAACAAAATACAAAATCAT------------------------CTAGCAATCTGAGCTGCAATTTTAAGAAATTAA-------AGTGACTA--A-----ATGAGTTGGGGCGGTGGAAAACTCTGACAATCCATTTGGAAATCAGATAC--------TATTCAGCTAATGCCSizeHit CountTotal NormTotal
No Reads
droFic1
G-GAGCGGGCCAGGAAGTCCCTCAGATACTTCCGTGGTCTGCCCAAGAAAGGTGAGTCA----------------------T-----GACCC---------GAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATCAGATTAGATAGAT-AGATTCGCTGGCCAATGCAATACAAAACAAT------------------------CCAGCAAACTGGACAGCAGTTAAATGCCATTAA-------AGTGAATT-AAATTAAGTGATTG--CTTGGCAGAAAAGTCCGCTCATCCATTTGGAAATTCGATAC-TATAAAGTATGAAGTTAATGTCSizeHit CountTotal NormTotal
No Reads
droKik1
A-GAGCGGGCCAGGACATCGCTCAGATACTTCCGAGGGCTGCCAAAGAAGGGTGAGTGAGCGATAATCGCCATGCAGGTCAATTCATTTACATTTAGATTGGAAA---A------------------------------------------------------------------------------CCA----GGGGGGGGGCGAGCAATACTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCATAGTAATCAATGGGTGACTCATTTTTCATTTCTCTCAGTGTGGTCAGCAATTTGTGGCCATCGA-------ATAGAGAC-TTTTTAAGTGGGTG--G---------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
G-GAGCGGGCCAGGAAGTCCTTGCGATACTTCCGTGGTTTGCCCAAAAACGGTGAGTCT----------------------T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................TCCGTGGTTTGCCCAAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
droBip1
G-GATCGGGCCAGGAAGTCGTTGCGATACTTCCGTGGATTGCCCAAAAATGGTGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
C-GAACGAGCCAGGAAATCGCTAAGATACTTCCGGGGCCTGCCGAAGAAAGGTGAGTTC----------------------T-----TA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................TCGCTAAGATACTTCCGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020200000000
..................CGCTAAGATACTTCCGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
................................CGGGGCCTGCCGAAGAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
..................CGCTAAGATACTTCCGGGGCCTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
..........................TACTTCCGGGGCCTGCCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
........................GATACTTCCGGGGCCTGCCGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000001000
...............AATCGCTAAGATACTTCCGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.......................AGATACTTCCGGGGCCTGCCGAAGAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
.........................ATACTTCCGGGGCCTGCCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
droPer2
C-GAACGAGCCAGGAAATCGCTAAGATACTTCCGGGGCCTGCCAAAGAAAGGTGAGTTC----------------------C-----TA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................TCGCTAAGATACTTCCGGGGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.............................TTCCGGGGCCTGCCAAAGAAAGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
droWil2
C-GAGAAGGCACGCAAATCGTTGAGATATTTCCGTGGCTTGTCGACAAAAGGTGAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................CGTTGAGATATTTCCGTGGCTTGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.00300300
..GAGAAGGCACGCAAATCGTTGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00201100
..............AAATCGTTGAGATATTTCCGTGGCTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
................ATCGTTGAGATATTTCCGTGGCTTGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
..........................TATTTCCGTGGCTTGTCGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
..GAGAAGGCACGCAAATCGTTGAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
........GCACGCAAATCGTTGAGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.....................TGAGATATTTCCGTGGCTTGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
...........................ATTTCCGTGGCTTGTCGACAAAAGAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
................................CGTGGCTTGTCGACAAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
......AGGCACGCAAATCGTTGAGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
..................CGTTGAGATATTTCCGTGGCTTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
........GCACGCAAATCGTTGAGATATT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
..................CGTTGAGATATTTCCGTGGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
................ATCGTTGAGATATTTCCGTGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
droVir3
G-GAAGAGGCTAAGAAGTCGTTGAACTATTTTCGTGGGCTGGATAAGTCGCGTAAGTCA----------------------A-----TATAT---------TAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAAAGAAA-----------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........TAAGAAGTCGTTGAACTATT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000002000000000000000000000000000000000000000000000000000000000
..............................TTCGTGGGCTGGATAAGTCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000001000000000000000000000000
............................TTTTCGTGGGCTGGATAAGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.......................AACTATTTTCGTGGGCTGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
G-GAGGAGGCTATGAAGTCACTTAATTATTTTCGTGGACTGGACAAGTTACGTGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................................GTGGACTGGACAAGTTACCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
droGri2
TCGAGTTGGCGCGCCGATCGTTGCGCTACTTTCGCGGACTGCGGAGCAAGGGTTAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 03:54 AM