dsi_21381

Name	Class	Family	Strand
DNAREP1_DM	RC	Helitron	+

CTTAAATTTCTAAAAAAAAATTACTACTGAAAGTTACATTCACAAAAACGGTAATAGTAGTGGTAAGCATTCATCCTAAAAAATACCAGTTACTCTTAAATTAAAGGGATATACTAGATTCACTGAGAAGTGTTTGATATCGAGAAGGAAACGTTTTCGACCATATATTCGTGATGTCTGTCCGACTATGTATGTGTAGTAGCCTTGGAACTGACCAATTCTATATCTATGCGAACAAAAAAAAAAAAAAACATTCCTATTA ************************************************.(((.((((((((((..................))))).))))).)))..((..((((...(((((....((((....)))).......(((((((.......))))))).((((((((((.(((....))))))..)))))))..))))).))))..))..************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	O002 Head	SRR553487 NRT_0-2 hours eggs	M024 male body	SRR553486 Makindu_3 day-old ovaries	SRR618934 dsim w501 ovaries
................................................................................................................................AGTGTTTGATATCGAGAAG...................................................................................................................	19	0	1	1.00	1	1	0	0	0	0
........................................................................................................................................................................................ACTATGTATGCGCGGTAGC...........................................................	19	3	11	0.36	4	0	0	4	0	0
..................................................................................................................................TGTTTGATTTAGGGAAGGAAA...............................................................................................................	21	3	6	0.17	1	0	1	0	0	0
.................................................................................................................................................................................................................................TCGATGCGGAGAAAAAAAAAAAAA.............	24	3	8	0.13	1	0	0	0	1	0
.........................................................................................................................................................................................CTATGTCTGTGTAGT..............................................................	15	1	10	0.10	1	0	1	0	0	0
.........................................................TAGTGGTAAGAATTC..............................................................................................................................................................................................	15	1	10	0.10	1	0	1	0	0	0
.........................................................TAGTGGTAAGAATTCC.............................................................................................................................................................................................	16	2	20	0.05	1	0	1	0	0	0
.....................................................ATAGTAGTGGTTAGTAT................................................................................................................................................................................................	17	2	20	0.05	1	0	0	0	0	1
..........................................................AGTGGTTAGAATTCATGCT.........................................................................................................................................................................................	19	3	20	0.05	1	0	0	1	0	0
....................................................................................................................................................................................................................GACCAATTCTAGAGCT..................................	16	2	20	0.05	1	0	0	0	0	1

GAATTTAAAGATTTTTTTTTAATGATGACTTTCAATGTAAGTGTTTTTGCCATTATCATCACCATTCGTAAGTAGGATTTTTTATGGTCAATGAGAATTTAATTTCCCTATATGATCTAAGTGACTCTTCACAAACTATAGCTCTTCCTTTGCAAAAGCTGGTATATAAGCACTACAGACAGGCTGATACATACACATCATCGGAACCTTGACTGGTTAAGATATAGATACGCTTGTTTTTTTTTTTTTTTGTAAGGATAAT ************************************************.(((.((((((((((..................))))).))))).)))..((..((((...(((((....((((....)))).......(((((((.......))))))).((((((((((.(((....))))))..)))))))..))))).))))..))..************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553486 Makindu_3 day-old ovaries	SRR553487 NRT_0-2 hours eggs	M023 head	SRR553488 RT_0-2 hours eggs	M053 female body	SRR553485 Chicharo_3 day-old ovaries	SRR902009 testis
..............................................................................................................................................................................ACAGACAGGCTGATACATACACATCAT.............................................................	27	0	1	12.00	12	12	0	0	0	0	0	0
...........................................................................................................................................AGCTCTTCCTTTGCAAAAGCTGGTAT.................................................................................................	26	0	1	5.00	5	5	0	0	0	0	0	0
.......................................................................................................................................................................AAGCACTACAGACAGGCTGATACAT......................................................................	25	0	1	3.00	3	3	0	0	0	0	0	0
....................................................................................................................................................................................................................CTGGTTAAGATATAGATACGCTTGTTTT......................	28	0	1	3.00	3	3	0	0	0	0	0	0
..............................................................................................................................................................................ACAGACAGGCTGATACATACACAT................................................................	24	0	1	3.00	3	3	0	0	0	0	0	0
..........................................................................................ATGAGAATTTAATTTCCCTATATGATCT................................................................................................................................................	28	0	1	2.00	2	2	0	0	0	0	0	0
.....................................................................................................................................................................................................................TGGTTAAGATATAGATACGCTTGT.........................	24	0	1	2.00	2	2	0	0	0	0	0	0
.......................................................................................................................................................................AAGCACTACAGACAGGCTGATACATAC....................................................................	27	0	1	1.00	1	1	0	0	0	0	0	0
.................................................................................................................................................................................................................TGACTGGTTAAGATATAGATACGCTTG..........................	27	0	1	1.00	1	1	0	0	0	0	0	0
..............................................................................................................................................................................ACAGACAGGCTGATACATACATATCAT.............................................................	27	1	1	1.00	1	1	0	0	0	0	0	0
.................................................................................................................................................................................................................TGACTGGTTAAGATATAGATACGCTT...........................	26	0	1	1.00	1	1	0	0	0	0	0	0
................................................................................................................................................................GGTATATAAGCACTACAGACAGGCT.............................................................................	25	0	1	1.00	1	1	0	0	0	0	0	0
....................................................................................................................................................................................................................CTGGTTAAGATATAGATACGCTTGT.........................	25	0	1	1.00	1	1	0	0	0	0	0	0
..............................................................................................................................................TCTTCCTTTGCAAAAGCTGGTATAT...............................................................................................	25	0	1	1.00	1	1	0	0	0	0	0	0
..................TTAATGATGACTTTTAATGTAAGTGTT.........................................................................................................................................................................................................................	27	1	1	1.00	1	1	0	0	0	0	0	0
...........................................................................................................................................AGCTCTTCCTTTGCAAAAGCTGGTATAT...............................................................................................	28	0	1	1.00	1	1	0	0	0	0	0	0
........AGATTTTTTTTTAATGATGACTTTT.....................................................................................................................................................................................................................................	25	1	1	1.00	1	1	0	0	0	0	0	0
.................................................................................................................................................................................................................TGACTGGTTAAGATATAGATACGCTTGTTT.......................	30	0	1	1.00	1	1	0	0	0	0	0	0
......................................................................................................................................................................TAAGCACTACAGACAGGCTGATAC........................................................................	24	0	1	1.00	1	1	0	0	0	0	0	0
.....................................................................................................................................................TTGCAAAAGCTGGTATATAAGCACT........................................................................................	25	0	1	1.00	1	1	0	0	0	0	0	0
.............................................................................................................................................................................TACAGACAGGCTGATACATACACATCAT.............................................................	28	0	1	1.00	1	1	0	0	0	0	0	0
..............................................................................TTTTTATGGTCAATGAGAATTTAAT...............................................................................................................................................................	25	0	1	1.00	1	1	0	0	0	0	0	0
..................................................................................................................................................................TATATAAGCACTACAGACAGGCTGAT..........................................................................	26	0	1	1.00	1	1	0	0	0	0	0	0
....................................................................................................................................................................................................................CTGGTTAAGATATAGATACGCTTGTTT.......................	27	0	1	1.00	1	1	0	0	0	0	0	0
.........................................................................................................................................................AAAAGCTGGTATATAAGCACTACAGACAGG...............................................................................	30	0	1	1.00	1	1	0	0	0	0	0	0
...........................................TTTTTGCTATTCCCATCACCAT.....................................................................................................................................................................................................	22	3	1	1.00	1	0	1	0	0	0	0	0
..............................................................................................................................................................................ACAGACAGGCTGAGACATACACAT................................................................	24	1	1	1.00	1	1	0	0	0	0	0	0
..............................................................................................................................................................................................................CCTTGACTGGTTAAGATATAGATACGCT............................	28	0	1	1.00	1	1	0	0	0	0	0	0
.................................................................................................................................................................................................................TGACTGGTTAAGATATAGATACGCT............................	25	0	1	1.00	1	1	0	0	0	0	0	0
.........................................................................AGGAGTTTTTATGCTCAATGAGAAT....................................................................................................................................................................	25	2	1	1.00	1	1	0	0	0	0	0	0
.....................................................................................................................................................................ATAAGCACTACAGACAGGCTGATACAT......................................................................	27	0	1	1.00	1	1	0	0	0	0	0	0
.........................................................................................................................................................................................................CGGAACCTTGACTGGTTA...........................................	18	0	1	1.00	1	0	0	1	0	0	0	0
........................................................................................................................................................AAAAAGCTGGTATACAAGCACTAAA.....................................................................................	25	3	3	0.67	2	2	0	0	0	0	0	0
..............................................TTGCAATTTTCATCACCAT.....................................................................................................................................................................................................	19	2	2	0.50	1	0	1	0	0	0	0	0
............................................TTTTGCTAGTCTCATCACCAT.....................................................................................................................................................................................................	21	3	3	0.33	1	0	0	0	1	0	0	0
..............................................TTGCAATTTTCATCACC.......................................................................................................................................................................................................	17	2	17	0.18	3	0	2	0	0	0	1	0
.............................................TTTGCTACTTTCATCACCAT.....................................................................................................................................................................................................	20	3	16	0.13	2	0	0	0	2	0	0	0
.............................................TTTGCTATTTTCATCACC.......................................................................................................................................................................................................	18	2	9	0.11	1	0	1	0	0	0	0	0
...............................................TGCAATTTTCATCACCATA....................................................................................................................................................................................................	19	3	20	0.10	2	0	2	0	0	0	0	0
............................................TTTTGCTATTCCCATCACCA......................................................................................................................................................................................................	20	3	11	0.09	1	0	1	0	0	0	0	0
............................................TTTTGCAATTTTCATCAC........................................................................................................................................................................................................	18	2	12	0.08	1	1	0	0	0	0	0	0
......................................................................................GTCAATGACAATTTAAGT..............................................................................................................................................................	18	2	12	0.08	1	0	0	1	0	0	0	0
...................................................................................................................................................................ATATACACACAACAGACAGGC..............................................................................	21	3	13	0.08	1	0	0	0	0	1	0	0
..............................................TTGCAATTTTCATCACCATA....................................................................................................................................................................................................	20	3	15	0.07	1	0	1	0	0	0	0	0
......................................................................................................................................................GTCAAAGGCTGGTATATAAG............................................................................................	20	3	19	0.05	1	0	0	0	0	0	0	1

Species	Coordinate	ID	Alignment
droSim2	4:220882-221143 +	dsi_21381	CTTAAAT--TTCTAA--AAA-AAAA-------------------------------TT-------ACTACTGAAAGTTACATTCACAAAAACGGTAAT-------------------------AGTAGTGGTAA-----------------------------------------GCATTCATC-----------------CTAAAAAATAC-CAGTTACTCTTA--AATTAAAGGGATATACTAGATTCACTGAGA-------AGTGTTTGATATCGAGAAGGAAACGTTTTCGACCATA-----------TATTCGTGAT--------------------------------------------------------------GTCTGTCCGACTATGTATGTGTAGTAGCCTTGGAACTGACCAA---------TTCTATATCT-ATGCGAACAAAAAAAAAAAAAAACATTCCTATT----------------A
droSec2	scaffold_30:28330-28617 +		CTTAAAT--TTTTAA--AAA-AAAATTTTCTATTT-------------AAAAAAAAGTTTTCTAAAATACTGAAAGTTACATTCACAAAAACGGTAAT-------------------------AGTTGTGGTTA-----------------------------------------GCATTCATC-----------------CTAAAAGATACCCAGTTACTCTTA--AATTAAAGGGATATACTAGATTCACTGAGA-------AGTGTTTGATATCGAGAAGGAAACGTTTTCGACCATA-----------TATTCGTGAT--------------------------------------------------------------GTCTGTCCGACTATGTATGTGTAGTAGCCTTGGAACTGACCAA---------TTCTATATCT-ATGCGAACAAAAAAAAAAAAAAACATTCCTATT----------------A
dm3	chr3L:18080984-18081238 -		TTTAAAT--TTGAAC--AAA-AGAA-------------------------------TT--A----CA---GAAATAT---------------GGCAAAGGTTAAAATATAA------AGCA--------------------------------------------------------------------A-----------ATTAATTATAC-CCGTTAATCGCA--GTGTAAAAGGGTGAACTAGATTCGTTGAAA-------ATTATGTAACAGGCAGAAGGAAGCGTTTTCGACTATATAAAGTA----TATTCTTGATCGGGATCA--------------------------------------------------GTCTGTCTGTCTGTGCTTATGAACTTCGAGATCTCAGGAACTATAAAAGCTGGAAAGAAAAGC------------TAAAAGACAAAGAAACAGCCC---------------------
droEre2	scaffold_4690:17703468-17703744 +		CAATTAT--TTTTTG--AAA-AAAA--AA---------------------------------------------AGAAAACGTCACAAAAAATGAAC----------------------------------------CAGAAATAC-----------------------------G------------TGCCCTTTTACGCGGTAATTATAC-CCGTTACTCGTA--GAGTAAAAGGGTATACTAGATTCGTTGAAA-------AGTATGTAACAGGCAGAAGGAAACTTTTCCGACCATATAAAGTATATATATTCTTGATCAGGATCAATATCCGAGTCGATCTGGCCATGTGCAGACGCACA--------------------------TGTCCGTATGAACGCCTCGATCTTAGGAACAACAAAAGCTAGAATATTGAGA-----------------------------------TT----------------T
droYak3	v2_chrUn_4388:6891-7161 -		CCGATGT--TTTTTA--AAA-AAAT--TTATATTTTAATTAACAC-------------------------------------TTAAA------------------------AAATA-AGAA--------------AAC-------------------------------------ACAT------TTATT-----------TATTATTATAC-CCGTTACTCGTA--GAGTAAAAGGGTATACTAGATTCGTTGAAA-------AGTATGTAACAGGCAGAAGGAAGCGTTTCCGACCATATAAACTATATATATTCTTGATCAGGATCAATAGCCGAGTCGATTTGGCCATGTCC----------------------------GTCTGTCCGTCCGTATGAACGTCGAGATCTCAGGAACTACAAAAGCTAGAAAGTTGAGA-----------------------------------TT----------------A
droEug1	scf7180000405868:2330-2585 +		TGAATTT----CTAATAGCA-AAAT--TAATATT-------------------------------------------------------------------------TTAAAATTG-TGTA--------------AACAGCAACCGGTATCTTATAGTCGCATCACTCGACTGTAGCGTTTCTTCTTGTA-----------TATTTTTGTAC-CCGTTACTCGTA--GAGAAAAAGAGTATACTAGATTCGTTGAAA-------AGTATGTAACAGGTAGAAGGATGCGTTTCCGACTCTATAAAGGATATATATATGTAGG-----GTAG----------------------------------------------------------------------------------TACAAATTGATAAT---------GTTTATTTCGGATATGTATAAAAAAAGTAAAA-----------------------------
droBia1	scf7180000302411:951268-951481 +		TAT--AT--TTCTAG--GAA-AAAG--TGAG--TGTA------ACTGTAGAAAA------------------------------------------------------------AA-ACAA-------TGATTACA-------------------------------------------------TTGGA-----------GCTATTTATAC-CAATCACTCGTA--GAGTAAAAGAGTATACTAGATTCGTCGGAA-------AGTATGTAACG--TAGACGGATGCGTTTCCGACACCATAAAGTATATATATTCTTGGTCAGACCCAC-------------------------------------------------------------------------GCC----------------TACA---------GTTTAT-------G-----ATAGAAACAAATGGCCATAACTCTT----------------A
droTak1	scf7180000415710:62033-62298 -		ATAAAAT--TAAATA--T-A-AGAT------------------------------TC---T----CT---TAAAACTTATAC---------------ACATCT---TTTAAAATTGATGTAAAAATCCTGTTTT---------------------------------------------------TTATT-----------TCTTTTTATAC-CCGTTACTCGTA--GAGTAAAAGGGTATACTAGATTCGTGAAAA-------AGTATGTAACAGCTAGAAGGAAGCGTTTCCGACCCCATAAAGTATATATATTCTTGATCC------------------------------------------------------------GTCTGTCCGTCTGTATGAACGGTCAGATCTCAGAAACTACAAAAGCTAGAAGGTTGAGA-----------------------------------TTTTCCACACATATTCTTC
droEle1	scf7180000491238:735249-735542 +		ATAAAAT--TCGATA--C-A-AAGT------------------------------AGT-------TTTAGGGAATACTACATTTACCC-----GTACC-------------------------TGCAAGGGTA-------------------------------------------------------TA-----------CCTTTTTATAC-CAGTTTTTCGTA--AAGTAAAAGGGTATATTGTCTTTGTTAAAA-------AGTATGTAACAGGTAGAAGGAAGCGTTTCCGACCCTATGAAGTATATATATTCAAG-----GATCAGTAGCCGAGTCGATCTTGCCATGTCCGTCTGTCTGTCTGTCCGTCGGTCTGTCTGTCTGTCCGTCTGTATGAACGTCGAGATCTCGGAAACTAGAGA---------TTTGGAATTT-GGAAGTGCAGA---------------------------------------
droRho1	scf7180000780104:286860-287159 -		TATAAATCCTTTTA---GAACACAT--TAATATT-----GAACACTGTTGATAA------------------------------------------------------------TA-AAAA-------TGTTTTTAGTAGCAATAT-----------------------------ATT----------TT-----------TATAATTATAC-CCGTTACTCGTA--GAGTAAAAGGGTATATTGTATTCGTGCAAA-------AGTATGTAACAGGTAGAAGGAAGCGTTTCCGACCCTATAAAGTATATATATTCTTGTTCAGGATCACTAGCCGAGTTGATCTAGCCATGTCCGCCTGTCCGTCTGTCC--------GTCTGTCTGTCTGTCCGTATGAACGCTGAGATCTCGGAAACTATAAAAGCTAGAAGATTGGCA-----------------------------------TT----------------T
dp5	Unknown_group_62:4984-5096 +		----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAC-CCGATACTCAAAATGAGTATTGGGGTATATTAGATTTGTGGTGAAAGTGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCCATAAAGTAAATATATTCTTGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2	scaffold_42:91064-91176 -		----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAC-CCGATATTCAAAATGAGTATTGGGGTATATTAGATTTGTGGTGAAAGTGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCCATAAAGTATATATATTCTTGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

CTTAAAT--TTCTAA--AAA-AAAA-------------------------------TT-------ACTACTGAAAGTTACATTCACAAAAACGGTAAT-------------------------AGTAGTGGTAA-----------------------------------------GCATTCATC-----------------CTAAAAAATAC-CAGTTACTCTTA--AATTAAAGGGATATACTAGATTCACTGAGA-------AGTGTTTGATATCGAGAAGGAAACGTTTTCGACCATA-----------TATTCGTGAT--------------------------------------------------------------GTCTGTCCGACTATGTATGTGTAGTAGCCTTGGAACTGACCAA---------TTCTATATCT-ATGCGAACAAAAAAAAAAAAAAACATTCCTATT----------------A	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
........................................................................................................................................................................................................................................................................AGTGTTTGATATCGAGAAG......................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0

droSec2

CTTAAAT--TTTTAA--AAA-AAAATTTTCTATTT-------------AAAAAAAAGTTTTCTAAAATACTGAAAGTTACATTCACAAAAACGGTAAT-------------------------AGTTGTGGTTA-----------------------------------------GCATTCATC-----------------CTAAAAGATACCCAGTTACTCTTA--AATTAAAGGGATATACTAGATTCACTGAGA-------AGTGTTTGATATCGAGAAGGAAACGTTTTCGACCATA-----------TATTCGTGAT--------------------------------------------------------------GTCTGTCCGACTATGTATGTGTAGTAGCCTTGGAACTGACCAA---------TTCTATATCT-ATGCGAACAAAAAAAAAAAAAAACATTCCTATT----------------A	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
No Reads

dm3

TTTAAAT--TTGAAC--AAA-AGAA-------------------------------TT--A----CA---GAAATAT---------------GGCAAAGGTTAAAATATAA------AGCA--------------------------------------------------------------------A-----------ATTAATTATAC-CCGTTAATCGCA--GTGTAAAAGGGTGAACTAGATTCGTTGAAA-------ATTATGTAACAGGCAGAAGGAAGCGTTTTCGACTATATAAAGTA----TATTCTTGATCGGGATCA--------------------------------------------------GTCTGTCTGTCTGTGCTTATGAACTTCGAGATCTCAGGAACTATAAAAGCTGGAAAGAAAAGC------------TAAAAGACAAAGAAACAGCCC---------------------	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
........................................................................................................................................................................................................................................................TCGTTGAAA-------ATTATGTAACAGGCAGA........................................................................................................................................................................................................................	26	3	7.33	22	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................TCGAGATCTCAGGAACTATAAAAGC...................................................................	25	20	1.85	37	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	17	0	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCAGGAACTATAAAAGCT..................................................................	21	20	1.55	31	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................TTCGAGATCTCAGGAACTATAAAAGC...................................................................	26	3	1.33	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................TTCGTTGAAA-------ATTATGTAACAGGCAGA........................................................................................................................................................................................................................	27	3	1.33	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................AAATAT---------------GGCAAAGGTTAAA........................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................AACTATAAAAGCTGGAAAGAAAAGC------------..........................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGAGATCTCAGGAACTATAAAAGC...................................................................	27	3	1.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0
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...........................................................................................................................................................................................................................................................................................................................................................................................................................TCTCAGGAACTATAAAAGCTGGAA..............................................................	24	7	0.14	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................GAGATCTCAGGAACTATAAAAGCTGGA...............................................................	27	7	0.14	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCAGGAACTATAAAAGCTGGAA..............................................................	25	7	0.14	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................GGCAGAAGGAAGCGTTTTCGA.........................................................................................................................................................................................................	21	8	0.13	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

CAATTAT--TTTTTG--AAA-AAAA--AA---------------------------------------------AGAAAACGTCACAAAAAATGAAC----------------------------------------CAGAAATAC-----------------------------G------------TGCCCTTTTACGCGGTAATTATAC-CCGTTACTCGTA--GAGTAAAAGGGTATACTAGATTCGTTGAAA-------AGTATGTAACAGGCAGAAGGAAACTTTTCCGACCATATAAAGTATATATATTCTTGATCAGGATCAATATCCGAGTCGATCTGGCCATGTGCAGACGCACA--------------------------TGTCCGTATGAACGCCTCGATCTTAGGAACAACAAAAGCTAGAATATTGAGA-----------------------------------TT----------------T	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.......................................................................................................................................................................................................................................AAAAGGGTATACTAGATTCGT.....................................................................................................................................................................................................................................................	21	20	0.10	2	0	0	0	0	2	0	0
.............................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAATATCCGAG..............................................................................................................................................................	22	10	0.10	1	1	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................ATCAGGATCAATATCCGAGT.............................................................................................................................................................	20	11	0.09	1	0	0	0	0	0	1	0
...............................................................................................................................................................................................................................TA--GAGTAAAAGGGTATACTAGATTC.......................................................................................................................................................................................................................................................	25	20	0.05	1	0	0	0	0	1	0	0
.......................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGGATC........................................................................................................................................................................	18	20	0.05	1	0	0	0	0	0	1	0
...................................................................................................................................................................................................................................................TAGATTCGTTGAAA-------AGTATGTAACAGG............................................................................................................................................................................................................................	27	20	0.05	1	1	0	0	0	0	0	0

droYak3

CCGATGT--TTTTTA--AAA-AAAT--TTATATTTTAATTAACAC-------------------------------------TTAAA------------------------AAATA-AGAA--------------AAC-------------------------------------ACAT------TTATT-----------TATTATTATAC-CCGTTACTCGTA--GAGTAAAAGGGTATACTAGATTCGTTGAAA-------AGTATGTAACAGGCAGAAGGAAGCGTTTCCGACCATATAAACTATATATATTCTTGATCAGGATCAATAGCCGAGTCGATTTGGCCATGTCC----------------------------GTCTGTCCGTCCGTATGAACGTCGAGATCTCAGGAACTACAAAAGCTAGAAAGTTGAGA-----------------------------------TT----------------A	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
...........................................................................................................................................................................................................................................................................................................................................TAGCCGAGTCGATTTGG.....................................................................................................................................................	17	20	0.15	3	0	0	0	0	0	0	0	0	0	0	3
......................................................................................................................................................................................................................................................................................................................................................................................................................CGAGATCTCAGGAACTACAAAAGC...................................................................	24	20	0.15	3	0	3	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................TGGCCATGTCC----------------------------GTCTGTCCGTC......................................................................................................	22	20	0.15	3	0	3	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................AGCGTTTCCGACCATATAAA................................................................................................................................................................................................	20	20	0.10	2	0	0	0	0	0	0	2	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................TTGGCCATGTCC----------------------------GTCTGTCCGTCCGTAT.................................................................................................	28	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................TTTGGCCATGTCC----------------------------GTCTGTCCGTCCGTA..................................................................................................	28	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................A--GAGTAAAAGGGTATACT.............................................................................................................................................................................................................................................................	18	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0

droEug1

TGAATTT----CTAATAGCA-AAAT--TAATATT-------------------------------------------------------------------------TTAAAATTG-TGTA--------------AACAGCAACCGGTATCTTATAGTCGCATCACTCGACTGTAGCGTTTCTTCTTGTA-----------TATTTTTGTAC-CCGTTACTCGTA--GAGAAAAAGAGTATACTAGATTCGTTGAAA-------AGTATGTAACAGGTAGAAGGATGCGTTTCCGACTCTATAAAGGATATATATATGTAGG-----GTAG----------------------------------------------------------------------------------TACAAATTGATAAT---------GTTTATTTCGGATATGTATAAAAAAAGTAAAA-----------------------------	Size	Hit Count	Total Norm	Total
No Reads

droBia1

TAT--AT--TTCTAG--GAA-AAAG--TGAG--TGTA------ACTGTAGAAAA------------------------------------------------------------AA-ACAA-------TGATTACA-------------------------------------------------TTGGA-----------GCTATTTATAC-CAATCACTCGTA--GAGTAAAAGAGTATACTAGATTCGTCGGAA-------AGTATGTAACG--TAGACGGATGCGTTTCCGACACCATAAAGTATATATATTCTTGGTCAGACCCAC-------------------------------------------------------------------------GCC----------------TACA---------GTTTAT-------G-----ATAGAAACAAATGGCCATAACTCTT----------------A	Size	Hit Count	Total Norm	Total
No Reads

droTak1

ATAAAAT--TAAATA--T-A-AGAT------------------------------TC---T----CT---TAAAACTTATAC---------------ACATCT---TTTAAAATTGATGTAAAAATCCTGTTTT---------------------------------------------------TTATT-----------TCTTTTTATAC-CCGTTACTCGTA--GAGTAAAAGGGTATACTAGATTCGTGAAAA-------AGTATGTAACAGCTAGAAGGAAGCGTTTCCGACCCCATAAAGTATATATATTCTTGATCC------------------------------------------------------------GTCTGTCCGTCTGTATGAACGGTCAGATCTCAGAAACTACAAAAGCTAGAAGGTTGAGA-----------------------------------TTTTCCACACATATTCTTC	Size	Hit Count	Total Norm	Total
No Reads

droEle1

ATAAAAT--TCGATA--C-A-AAGT------------------------------AGT-------TTTAGGGAATACTACATTTACCC-----GTACC-------------------------TGCAAGGGTA-------------------------------------------------------TA-----------CCTTTTTATAC-CAGTTTTTCGTA--AAGTAAAAGGGTATATTGTCTTTGTTAAAA-------AGTATGTAACAGGTAGAAGGAAGCGTTTCCGACCCTATGAAGTATATATATTCAAG-----GATCAGTAGCCGAGTCGATCTTGCCATGTCCGTCTGTCTGTCTGTCCGTCGGTCTGTCTGTCTGTCCGTCTGTATGAACGTCGAGATCTCGGAAACTAGAGA---------TTTGGAATTT-GGAAGTGCAGA---------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droRho1

TATAAATCCTTTTA---GAACACAT--TAATATT-----GAACACTGTTGATAA------------------------------------------------------------TA-AAAA-------TGTTTTTAGTAGCAATAT-----------------------------ATT----------TT-----------TATAATTATAC-CCGTTACTCGTA--GAGTAAAAGGGTATATTGTATTCGTGCAAA-------AGTATGTAACAGGTAGAAGGAAGCGTTTCCGACCCTATAAAGTATATATATTCTTGTTCAGGATCACTAGCCGAGTTGATCTAGCCATGTCCGCCTGTCCGTCTGTCC--------GTCTGTCTGTCTGTCCGTATGAACGCTGAGATCTCGGAAACTATAAAAGCTAGAAGATTGGCA-----------------------------------TT----------------T	Size	Hit Count	Total Norm	Total
No Reads

dp5

----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAC-CCGATACTCAAAATGAGTATTGGGGTATATTAGATTTGTGGTGAAAGTGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCCATAAAGTAAATATATTCTTGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.......................................................................................................................................................................................................................................................................................GAAGGAATCGTTTCCGACCCCATAAA................................................................................................................................................................................................	26	20	3.55	71	0	71	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGAT........................................................................................................................................................................................................................................	18	20	1.95	39	0	39	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGATGT......................................................................................................................................................................................................................................	20	20	1.35	27	0	0	0	0	0	0	19	8	0	0
.......................................................................................................................................................................................................................................................................................GAAGGAATCGTTTCCGACCCCATAAAG...............................................................................................................................................................................................	27	20	0.90	18	0	0	0	0	0	0	0	18	0	0
.......................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGATGTGT....................................................................................................................................................................................................................................	22	20	0.85	17	0	0	0	0	0	0	0	0	17	0
.......................................................................................................................................................................................................................................................................................GAAGGAATCGTTTCCGACCCCATA..................................................................................................................................................................................................	24	20	0.80	16	0	0	14	0	0	0	0	0	2	0
........................................................................................................................................................................................................................................................TTGTGGTGAAAGTGGATGTGTG...................................................................................................................................................................................................................................	22	20	0.75	15	0	0	0	0	0	0	0	15	0	0
.......................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGATGTGTGTAA................................................................................................................................................................................................................................	26	20	0.65	13	0	12	0	0	0	0	0	0	1	0
.......................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGATGTGTGT..................................................................................................................................................................................................................................	24	20	0.65	13	0	0	0	0	0	0	13	0	0	0
........................................................................................................................................................................................................................................................TTGTGGTGAAAGTGGATG.......................................................................................................................................................................................................................................	18	20	0.60	12	0	12	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................AAGGAATCGTTTCCGACCCCA....................................................................................................................................................................................................	21	20	0.60	12	0	12	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGATGTGA....................................................................................................................................................................................................................................	22	20	0.50	10	0	0	0	0	0	0	0	10	0	0
..................................................................................................................................................................................................................................................................AGTGGATGTGTGTAACGTC............................................................................................................................................................................................................................	19	20	0.50	10	0	0	1	0	0	0	9	0	0	0
.......................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGATGTGTGTAACG..............................................................................................................................................................................................................................	28	20	0.45	9	0	9	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................TAGATTTGTGGTGAAAGTGG..........................................................................................................................................................................................................................................	20	20	0.40	8	0	3	0	0	0	0	1	0	3	1
.......................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGATGTGTC...................................................................................................................................................................................................................................	23	20	0.40	8	0	0	1	0	0	0	0	0	7	0
.......................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGATGTG.....................................................................................................................................................................................................................................	21	20	0.35	7	0	0	7	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................GGGGTATATTAGATTTGTGG...................................................................................................................................................................................................................................................	20	20	0.30	6	0	0	0	0	0	0	0	0	6	0
........................................................................................................................................................................................................................................................TTGTGGTGAAAGTGGATGTG.....................................................................................................................................................................................................................................	20	20	0.25	5	0	0	0	0	1	0	0	4	0	0
...............................................................................................................................................................................................................................AAATGAGTATTGGGGTATATT.............................................................................................................................................................................................................................................................	21	20	0.25	5	0	0	0	0	0	0	4	0	1	0
..............................................................................................................................................................................................................................................................................................TCGTTTCCGACCCCATAAAGTAA............................................................................................................................................................................................	23	4	0.25	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................ATCGTTTCCGACCCCATAAAGTAAA...........................................................................................................................................................................................	25	4	0.25	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................TCCAGAAGGAATCGTTTCC...........................................................................................................................................................................................................	19	20	0.20	4	0	4	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................TGTGTGTAACGTCCAGAAGG.....................................................................................................................................................................................................................	20	20	0.20	4	0	0	0	0	0	4	0	0	0	0
..........................................................................................................................................................................................................................................................GTGGTGAAAGTGGATGTGTGT..................................................................................................................................................................................................................................	21	20	0.20	4	0	0	0	0	0	0	4	0	0	0
...........................................................................................................................................................................................................................................................TGGTGAAAGTGGATGTGTG...................................................................................................................................................................................................................................	19	20	0.20	4	0	4	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................TTAGATTTGTGGTGAAAGTGGA.........................................................................................................................................................................................................................................	22	20	0.20	4	0	0	0	0	0	0	0	4	0	0
.........................................................................................................................................................................................................................................................TGTGGTGAAAGTGGATGTGTG...................................................................................................................................................................................................................................	21	20	0.20	4	0	0	0	0	0	0	0	0	4	0
................................................................................................................................................................................................................................................TATTAGATTTGTGGTGAAAGTGG..........................................................................................................................................................................................................................................	23	20	0.20	4	0	0	0	0	0	0	0	3	1	0
.....................................................................................................................................................................................................................................................GATTTGTGGTGAAAGTGGATG.......................................................................................................................................................................................................................................	21	20	0.20	4	0	0	0	0	0	1	3	0	0	0
.........................................................................................................................................................................................................................................................TGTGGTGAAAGTGGATGTGTGT..................................................................................................................................................................................................................................	22	20	0.20	4	0	0	0	0	0	0	2	2	0	0
..................................................................................................................................................................................................................................................TTAGATTTGTGGTGAAAGTGG..........................................................................................................................................................................................................................................	21	20	0.15	3	0	0	0	0	0	0	3	0	0	0
..................................................................................................................................................................................................................................................TTAGATTTGTGGTGAAAGTGGAT........................................................................................................................................................................................................................................	23	20	0.15	3	0	3	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................CAAAATGAGTATTGGGGT..................................................................................................................................................................................................................................................................	18	20	0.15	3	0	0	0	0	3	0	0	0	0	0
.................................................................................................................................................................................................................................ATGAGTATTGGGGTATATTAG...........................................................................................................................................................................................................................................................	21	20	0.15	3	0	0	0	0	0	0	0	0	3	0
............................................................................................................................................................................................................................TCAAAATGAGTATTGGGGTA.................................................................................................................................................................................................................................................................	20	20	0.10	2	0	2	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................CGTCCAGAAGGAATCGTT..............................................................................................................................................................................................................	18	20	0.10	2	0	2	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................ACGTCCAGAAGGAATCGTTTCC...........................................................................................................................................................................................................	22	20	0.10	2	0	2	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TTGTGGTGAAAGTGGATGTGT....................................................................................................................................................................................................................................	21	20	0.10	2	0	0	0	0	0	0	1	0	1	0
.......................................................................................................................................................................................................................GATACTCAAAATGAGTATTGGGGTA.................................................................................................................................................................................................................................................................	25	20	0.10	2	0	2	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................TAC-CCGATACTCAAAATGAG...........................................................................................................................................................................................................................................................................	20	20	0.10	2	0	2	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................ATTAGATTTGTGGTGAAAGTG...........................................................................................................................................................................................................................................	21	20	0.10	2	0	0	0	0	1	0	0	0	1	0
.......................................................................................................................................................................................................................................................................ATGTGTGTAACGTCCAGAAGGA....................................................................................................................................................................................................................	22	20	0.10	2	0	0	0	0	2	0	0	0	0	0
.................................................................................................................................................................................................................................................ATTAGATTTGTGGTGAAAG.............................................................................................................................................................................................................................................	19	20	0.10	2	0	0	0	0	0	0	0	0	2	0
..................................................................................................................................................................................................................................................TTAGATTTGTGGTGAAAGTG...........................................................................................................................................................................................................................................	20	20	0.05	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TTGTGGTGAAAGTGGATGTGTGTAAC...............................................................................................................................................................................................................................	26	20	0.05	1	0	0	0	0	0	0	0	1	0	0
................................................................................................................................................................................................................................................TATTAGATTTGTGGTGAAAGTGGAT........................................................................................................................................................................................................................................	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................ATATTAGATTTGTGGTGAAAG.............................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	1	0	0
....................................................................................................................................................................................................................................................AGATTTGTGGTGAAAGTGGA.........................................................................................................................................................................................................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	1	0
......................................................................................................................................................................................................................................................ATTTGTGGTGAAAGTGGATGT......................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	1	0	0	0	0
........................................................................................................................................................................................................................................................TTGTGGTGAAAGTGGATGTGTGT..................................................................................................................................................................................................................................	23	20	0.05	1	0	0	1	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................TATATTAGATTTGTGGTGAAAGTGGA.........................................................................................................................................................................................................................................	26	20	0.05	1	0	0	0	0	0	0	0	1	0	0
......................................................................................................................................................................................................................................................ATTTGTGGTGAAAGTGGATGTGTG...................................................................................................................................................................................................................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................TAACGTCCAGAAGGAATCGTTTCCGA.........................................................................................................................................................................................................	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGATGTGTGTAACGT.............................................................................................................................................................................................................................	29	20	0.05	1	0	0	0	0	0	0	1	0	0	0
.......................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGATGTGTGTAAC...............................................................................................................................................................................................................................	27	20	0.05	1	0	0	1	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................TACTCAAAATGAGTATTGGGGTAT................................................................................................................................................................................................................................................................	24	20	0.05	1	0	0	0	0	1	0	0	0	0	0
....................................................................................................................................................................................................................................................AGATTTGTGGTGAAAGTGG..........................................................................................................................................................................................................................................	19	20	0.05	1	0	0	0	0	0	0	1	0	0	0
.........................................................................................................................................................................................................................................................TGTGGTGAAAGTGGATGTGTGTAACGT.............................................................................................................................................................................................................................	27	20	0.05	1	0	0	0	0	0	0	1	0	0	0
...........................................................................................................................................................................................................................................................TGGTGAAAGTGGATGTGTGTA.................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................TGTGGTGAAAGTGGATGTG.....................................................................................................................................................................................................................................	19	20	0.05	1	0	0	0	0	0	1	0	0	0	0
.........................................................................................................................................................................................................................................TGGGGTATATTAGATTTGTGGT..................................................................................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................GTGGTGAAAGTGGATGTGTGTAAC...............................................................................................................................................................................................................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................AAGGAATCGTTTCCGACCCCATAAAGG..............................................................................................................................................................................................	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................ATGTGTGTAACGTCCAGAAGGAATCGT...............................................................................................................................................................................................................	27	20	0.05	1	0	0	0	0	0	0	0	0	1	0

droPer2

----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAC-CCGATATTCAAAATGAGTATTGGGGTATATTAGATTTGTGGTGAAAGTGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCCATAAAGTATATATATTCTTGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
........................................................................................................................................................................................................................................................................TGTGTGTAACGTCCAGAAGG.....................................................................................................................................................................................................................	20	20	0.20	4	0	0	0	4	0	0
.......................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGATGTGT....................................................................................................................................................................................................................................	22	20	0.15	3	0	3	0	0	0	0
.......................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGATG.......................................................................................................................................................................................................................................	19	20	0.10	2	0	2	0	0	0	0
.........................................................................................................................................................................................................................TATTCAAAATGAGTATTGGG....................................................................................................................................................................................................................................................................	20	16	0.06	1	0	1	0	0	0	0
..............................................................................................................................................................................................................................................TATATTAGATTTGTGGTGAAAGTGGAT........................................................................................................................................................................................................................................	27	20	0.05	1	0	1	0	0	0	0
................................................................................................................................................................................................................................................................AAAGTGGATGTGTGTAACG..............................................................................................................................................................................................................................	19	20	0.05	1	0	1	0	0	0	0
................................................................................................................................................................................................................................................TATTAGATTTGTGGTGAAAGTGGAT........................................................................................................................................................................................................................................	25	20	0.05	1	0	1	0	0	0	0

dsi_21381

4:220932-221093 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Repeatable elements

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-28.7	-28.3	-28.3