ID:

dsi_21370

Coordinate:

4:40574-40723 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.4 -7.4 -7.2

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

GGCTTCGTTTCCTAACTATCGAGGTGAATGCAAAAAGGCGAAATTCACAGGTATGTTCAACATTCAATTTTTAAATTCCAATGAGAATGAAACGTGCAATACAAAAGCCAATTTCTGATAATTTCTTTGTCTTTAAACTAAAATTATTTAGAGTGCTTTGCTTAAGAAAACACATTTTTAGCTTTTTTTGGAAAAGATTTAAGAACAACTTTTTATATTTTCTTTACAATATTAATCCTTTTTTTACGAA
********************************************************************************************...........(((((....((((((((((((.((((....))))...)))))).)))))).)))))........***********************************************************************************
Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
SRR553485
Chicharo_3 day-old ovaries
SRR553486
Makindu_3 day-old ovaries
SRR553488
RT_0-2 hours eggs
SRR553487
NRT_0-2 hours eggs
SRR902008
ovaries
GSM343915
embryo
SRR902009
testis
M053
female body
M025
embryo
O001
Testis
............................TGCAAAAAGGCGAAATTCACAGGTA..................................................................................................................................................................................................... 25 0 1 11.00 11 3 5 1 1 1 0 0 0 0 0 0
............TAACTATCGAGGTGAATGCAAAAAGGC................................................................................................................................................................................................................... 27 0 1 10.00 10 0 5 2 0 0 1 1 0 1 0 0
...TTCGTTTCCTAACTATCGAGGTGAA.............................................................................................................................................................................................................................. 25 0 1 6.00 6 6 0 0 0 0 0 0 0 0 0 0
............TAACTATCGAGGTGAATGCAAAAAGG.................................................................................................................................................................................................................... 26 0 1 6.00 6 0 4 0 0 2 0 0 0 0 0 0
............TAACTATCGAGGTCAATGCAAAAAGG.................................................................................................................................................................................................................... 26 1 1 4.00 4 0 0 3 1 0 0 0 0 0 0 0
................TATCGAGGTGAATGCAAAAAGGCGAAA............................................................................................................................................................................................................... 27 0 1 2.00 2 0 0 0 0 0 1 0 1 0 0 0
................TATCGAGGTCAATGCAAAAAGGCGAAA............................................................................................................................................................................................................... 27 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
..................TCGAGGTGAATGCAAAAAGGCGAAA............................................................................................................................................................................................................... 25 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
........................TCAATGCAAAAAGGCGAAATTCACAGG....................................................................................................................................................................................................... 27 1 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0
..................TCGAGGTGAATGCAAAAAGGCGAAATT............................................................................................................................................................................................................. 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
............TAACTATCGAGGTGAATGCAAAAAGGCGAA................................................................................................................................................................................................................ 30 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
.................................AAAGGCGAAATTCACAG........................................................................................................................................................................................................ 17 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
........................TCAATGCAAAAAGGCGAAATTCACAGGTA..................................................................................................................................................................................................... 29 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................TTTTGGAAAAGATTTAAGAACAA.......................................... 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
...TTCGTTTCCTAACTATCGAGGCGAA.............................................................................................................................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................CGAGGTGAATGCAAAAAGGCGAAATT............................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................GAATGCAAAAAGGCGAAATTCACAGGTA..................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
............................................................................................CGTGCAATACAAAAGCCAATTTCTGA.................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............AACTATCGAGGTGAATGCAAAAAGGCGAAA............................................................................................................................................................................................................... 30 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........................GAATGCAAAAAGGCGAAATTCA........................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....TCGTTTCCTAACTATCGAGGTGAA.............................................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................TGAATGCAAAAAGGCGAAAT.............................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...TTCGTTTTCTAACTATCGAGG.................................................................................................................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............................CAAAAAGGCGAAATTCAC.......................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................TTTTGGAAAAGATTTAAGAACAACT........................................ 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................TATCGAGGTCAATGCAAAAAGGCGA................................................................................................................................................................................................................. 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
....TCGTTTCCTAACTATCGAGGTCAATGC........................................................................................................................................................................................................................... 27 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..................TCGAGGTGAATGCAAAAAGGCGAAAT.............................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........TCCTAACTATCGAGGTGAATGCAAA........................................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................ATGCAAAAAGGCGAAATTCACAGGTA..................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.................ATCGAGGTGAATGCAAAAAGGCGAAA............................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................TGAATGCAAAAAGGCGAAATTCAC.......................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................TAAAATTATTTAGAGTGCTTTGCTTAAGA................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........TCCTAACTATCGAGGTCAATGCA.......................................................................................................................................................................................................................... 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...................CGAGGTCAATGCAAAAAGGCGAAA............................................................................................................................................................................................................... 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................AGAGTGCTTTGCTTAAGAAAACACA............................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................TATCGAGGTGAATGCAAAAAGGCGAAATT............................................................................................................................................................................................................. 29 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
............TAACTATCGACGTGAATGCAAAAAGGC................................................................................................................................................................................................................... 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
............TAACTATCGAGGGGAATGCAAAAAGGCGA................................................................................................................................................................................................................. 29 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....CGTTTCCTAACTATCGAGGTGAAT............................................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
................TATCGAGGTGAATGCAAAAAGGCGA................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........TCCTAACTATCGAGGTGAATGCAAAA....................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
........TTCCTAACTATCGAGGTGA............................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
............TAACTATCGAGGTGAATGCAAAAAGGCGA................................................................................................................................................................................................................. 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
......GTTTCCTAACTATCGAGGTGA............................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........TCCTAACTATCGAGGTCAATGCAAA........................................................................................................................................................................................................................ 25 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
........................TGAATGCAAAAAGGCGAAATTCACAGG....................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
............TAACTATCGAGGTGAATGC........................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................TGAATGCAAAAAGGCGAAATTCA........................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................TGCAAAAAGGCGAAATT............................................................................................................................................................................................................. 17 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................TATTAGTCCTTTTTTTA.... 17 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................GCTATTTTCGGAAAAGAT.................................................... 18 2 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0
.....................................................................................................................................................................................................TTTAAGAACAACTCTTT.................................... 17 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................CTTTGCTGAAGCAAACAC............................................................................. 18 2 7 0.14 1 0 0 0 0 0 0 0 0 0 0 1
..................................................................................................................CTGATATTTTCTATGTTTTTA................................................................................................................... 21 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

CCGAAGCAAAGGATTGATAGCTCCACTTACGTTTTTCCGCTTTAAGTGTCCATACAAGTTGTAAGTTAAAAATTTAAGGTTACTCTTACTTTGCACGTTATGTTTTCGGTTAAAGACTATTAAAGAAACAGAAATTTGATTTTAATAAATCTCACGAAACGAATTCTTTTGTGTAAAAATCGAAAAAAACCTTTTCTAAATTCTTGTTGAAAAATATAAAAGAAATGTTATAATTAGGAAAAAAATGCTT
***********************************************************************************...........(((((....((((((((((((.((((....))))...)))))).)))))).)))))........********************************************************************************************
Read size # Mismatch Hit Count Total Norm Total GSM343915
embryo
M024
male body
M025
embryo
SRR553488
RT_0-2 hours eggs
SRR553487
NRT_0-2 hours eggs
SRR553486
Makindu_3 day-old ovaries
................................................TCCATACAAGTTGTAAGTTAA..................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
.........AGGATTGATAGCTCCACTTACGTTT........................................................................................................................................................................................................................ 25 0 1 1.00 1 0 0 1 0 0 0
...................................................................................................................................................................................................................CTATATAAAAGGAATGTTATAAT................ 23 3 2 0.50 1 1 0 0 0 0 0
....................................................................................................................................................................................................................GATATAAGAGGAATGTTATAAT................ 22 3 3 0.33 1 1 0 0 0 0 0
......................................................................................................................................................................................AAAAAAACCTTGTCTGAATTTT.............................................. 22 3 4 0.25 1 1 0 0 0 0 0
.............................................GTCTCCATGCAAGTTG............................................................................................................................................................................................. 16 2 20 0.20 4 0 0 0 4 0 0
.............................................GTCTCCATACAAGTTG............................................................................................................................................................................................. 16 1 5 0.20 1 0 0 0 1 0 0
....................................................................................................................................................................................................................TATATAAAAGGAATGGTATAAT................ 22 3 9 0.11 1 1 0 0 0 0 0
.........................................................................................................TCGGTTAAAGAGGATTAA............................................................................................................................... 18 2 12 0.08 1 0 0 0 0 1 0
............................................................................................................................................................................................................................AGAAATGTTATGATTA.............. 16 1 14 0.07 1 0 0 0 0 0 1
...................................TCCGCCTTAAGTGTCTA...................................................................................................................................................................................................... 17 2 18 0.06 1 0 0 0 1 0 0
..........................................................................................................................AAAAAATAGGAATTTGATTTT........................................................................................................... 21 3 20 0.05 1 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 4:40524-40773 - dsi_21370 GGCTTC----GTTTCCTAACT--------ATCGAGGTGAATGCAAA-----AAGGCGAA-ATTCACAGGT-ATG-----------TTCA---ACATTCAA---TTTTTAAATT--CCAATGAGAA-TGAAACGTGCAATACAAAAGCCAATTTCTGA-TAATTTCTTTGT-CTT---------------------------------------------------TAAACTAAAATTATTTAGAGTGCTT--------TG------------------------------------------------------------------CT----TAAGAAAACACATTTTT---------AGCT-TT---TTTTGGAAAAGATTTAAG--------AACA--------ACTT--TTTATATTTTCT-TTACAATATTAATC-----------------------------------CTTTTTTTAC-----GAA
droSec2 scaffold_52:30248-30497 - GGCTTC----GTTTCGTAACT--------ATCGAGGTGAATACAAA-----AAGCCGAA-ATTCACAGGT-ATG-----------TTCA---ACATTCAA---TTTTTAAATT--CCAATGAGAA-TGAAACGTGCAATACAAAAGCCAATTTCTGA-TAATTTCTTTGT-CTT---------------------------------------------------TAAACTTAAATTATTTAGAGTGCTT--------TG------------------------------------------------------------------CT----AAAGAAAACACATTTTT---------AGCT-TT---TTTTGGAAAAGATTTAAG--------AACA--------ACTT--TTTATATTTTCT-TTACAATATTAATC-----------------------------------CTTTTTTTAC-----GAA
dm3 chr4:86414-86676 - GGCTAC----GTTTCGTAACG--------ATCGAGGTGTATACAAA-G---AAGCCGAA-ATTCACAGGT-ATG-----------TAAA---GCATTTAA---TTTATAAATT--CCAATGAGAATTAAAACGTGCAATACAGAAGCCAATTTCTTA-TAATTTCTTTGT-CTT---------------------------------------------------TAAACTTAAATTATTTAGATTGCTT--------TC------------------------------------------------------------------CTATTAAAAAAAAAAACATTTTT---------AGCT-TTTTTTTTTCGAAAA--TTT--G--------AACA--------AATTTTTTTATATTTTCT-TTAAAACATTAATCCCTTTAACT-----------------------------TTTTTAC-----AAA
droEre2 scaffold_4512:1234130-1234470 + GGTTCT----GTTCCAAAACG--------ATCGAGATATATACAAA-G---AATCCGAATATTCACAGGT-ATG-----------TTCA---ACCTTTAA---TTTG--------TCAATGAGAA-TAAAATATGCAACACAAAAGCCAATTTTTGG--ATTTTTTTTGT-TTA-T----------------CTTCCCGATTTTGTTTTTTTGTCGCCCAGATTCCATCTTTAAATTATTCAGAGAGCTTAAAAGTACTGCTGGTACATTTATATTTTATTTTAAAAATGTTGAAAATGCAGAAAATTATTGGTGAAAAACT----------------AACATTTTTTTT--TATTAT----------TTTTTAAAATTGTTTAAG--------TAGACTA------------------------TTACAATATATTTCCCTTTTACT----------------------------TATTTTACGGCTGGAA
droYak3 4:53795-54147 - GGCTCT----GTTCCGAAACG--------ATCGAGATATATTCAAA-G---AAGCCGAAAATTTACAGGT-ATG-----------TTCA---AAATTTAA---TTTGTAAATT--CCAACAAGAA-TAATATGTGCAATA---AAACGAGTTTTTGA-AAATTTGTTTACTATA-TTTTAACAATCTGTTAACTGTCTTATTTTAAATTTTTGTCGCCCTGATTCAACCTTTAAATTATTGAAAGAGTT---------TGCTGGTACATTGGTACCAT-------------------TGTAGT--ACAATTGGTAAAAAGTTTAATCT----AAAGAAAACATTTTTTTTTTTACTATAATTGTA---TTTTCGAAAACATTTAAG--------CAGACTATTACTAC----TTTATATTTTCT-TTATAACATTTATC-----------------------------------CT-------C-----GAA
droTak1 scf7180000414546:21283-21418 + GGACCT----TCT--GCAACT-----GG-GTCGAGTTAAAATCAAA-G---GAGTCTGA-AAAAAAAGGT-ATG-----------TTAA---ATATAAAATCTTTAATAAACTTGACCGCGAAAA-TAAAATATGTAATATGAAAACAACTTTCATAATATTTTCTTCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000490971:363332-363641 + ACTTTTAATTGTTC---GATTATTCTAGGACTT-GCTAAAAATAAAAGGGCAAATCTACGGACCCAAGGT-ATG-----------TTCAGAAATATTAAA---TTTATTATAA--ACCGTGAAAA-TAATATATGCAG-----AAACAATTTCTCAAATATTTCCTGCG--ATTAATACGACAGGGCCT---C--------------------------------TACCTGCATTTTATTTAAGGCAT----------CC------------------------------------------------------------------T---------------TATGACT---------AGAT-TCTGTGTTTCAAAAA--GTT--TATACTAATAATT--------AATGTTTTGATAATTTATACCAAAACAATAATCTTCCCAACTTTGTTAAATCGTCTTAACAGTTAAACAATCTGTTTA-----AAA
droRho1 scf7180000778598:30848-30953 + TTAGCA-ATTGCCCTGAAGGG--------ATATACTTAAAATAAAA-GGAGAAGTCAAG-GACTCTAGGT-ATG-----------TTAA-AAATATTTAA---TATAATATTT--AACATAAAAC-TAAAATATGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13010:655489-655648 + GGAAGA-A--GTTACGTAA----------------------------------------------AAGGTAGTGTTCATTTTAAATTCCAAA---ATAGA---ATAATACAAA--ATTGTTTAAC-TAATATACA---------------TTTC------------------------------------------AGGTTTTTATTAT-------ATTGGATTCAAGCT-------ACTAAA-------AAAAACATTTCAGGTAC-----------------------------------------------------------------------------------------------------------------------------------------------------------AT-TAAAAATATCAGGT-----------------------------------TGTTTTTTAA-----ACA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GGCTTC----GTTTCCTAACT--------ATCGAGGTGAATGCAAA-----AAGGCGAA-ATTCACAGGT-ATG-----------TTCA---ACATTCAA---TTTTTAAATT--CCAATGAGAA-TGAAACGTGCAATACAAAAGCCAATTTCTGA-TAATTTCTTTGT-CTT---------------------------------------------------TAAACTAAAATTATTTAGAGTGCTT--------TG------------------------------------------------------------------CT----TAAGAAAACACATTTTT---------AGCT-TT---TTTTGGAAAAGATTTAAG--------AACA--------ACTT--TTTATATTTTCT-TTACAATATTAATC-----------------------------------CTTTTTTTAC-----GAASizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
........................................TGCAAA-----AAGGCGAA-ATTCACAGGT-A....................................................................................................................................................................................................................................................................................................................................................................................................................................25111.001100000051113000000
................TAACT--------ATCGAGGTGAATGCAAA-----AAGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................27110.001000010052000110000
...TTC----GTTTCCTAACT--------ATCGAGGTGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2516.00600000000006000000
................TAACT--------ATCGAGGTGAATGCAAA-----AAGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2616.00600000040200000000
....................T--------ATCGAGGTGAATGCAAA-----AAGGCGAA-A...............................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200000000000011000
..............................TCGAGGTGAATGCAAA-----AAGGCGAA-A...............................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200000010001000000
..............................TCGAGGTGAATGCAAA-----AAGGCGAA-ATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200000000002000000
................TAACT--------ATCGAGGTGAATGCAAA-----AAGGCGAA-................................................................................................................................................................................................................................................................................................................................................................................................................................................3012.00200000020000000000
.............................................A-----AAGGCGAA-ATTCACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................1712.00200000000002000000
................................................................................................................................................................................................................................................................................................................................................................................TTTTGGAAAAGATTTAAG--------AACA--------A.....................................................................................2311.00100000000000010000
...............................CGAGGTGAATGCAAA-----AAGGCGAA-ATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
.....................................GAATGCAAA-----AAGGCGAA-ATTCACAGGT-A....................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
...................................................................................................................................CGTGCAATACAAAAGCCAATTTCTGA-..............................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
.................AACT--------ATCGAGGTGAATGCAAA-----AAGGCGAA-A...............................................................................................................................................................................................................................................................................................................................................................................................................................................3011.00100000010000000000
.....................................GAATGCAAA-----AAGGCGAA-ATTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
....TC----GTTTCCTAACT--------ATCGAGGTGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
....................................TGAATGCAAA-----AAGGCGAA-AT..............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000001000000
..........................................CAAA-----AAGGCGAA-ATTCAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................TTTTGGAAAAGATTTAAG--------AACA--------ACT...................................................................................2511.00100000010000000000
..............................TCGAGGTGAATGCAAA-----AAGGCGAA-AT..............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
.............TCCTAACT--------ATCGAGGTGAATGCAAA-----.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
.......................................ATGCAAA-----AAGGCGAA-ATTCACAGGT-A....................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
.............................ATCGAGGTGAATGCAAA-----AAGGCGAA-A...............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
....................................TGAATGCAAA-----AAGGCGAA-ATTCAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
......................................................................................................................................................................................................................................TAAAATTATTTAGAGTGCTT--------TG------------------------------------------------------------------CT----TAAGA...........................................................................................................................................................2911.00100000010000000000
.................................................................................................................................................................................................................................................AGAGTGCTT--------TG------------------------------------------------------------------CT----TAAGAAAACACA....................................................................................................................................................2511.00100000000001000000
....................T--------ATCGAGGTGAATGCAAA-----AAGGCGAA-ATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000000000001000
.....C----GTTTCCTAACT--------ATCGAGGTGAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000000100000
....................T--------ATCGAGGTGAATGCAAA-----AAGGCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
.............TCCTAACT--------ATCGAGGTGAATGCAAA-----A........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
............TTCCTAACT--------ATCGAGGTGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000100000
................TAACT--------ATCGAGGTGAATGCAAA-----AAGGCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000001000000000
..........GTTTCCTAACT--------ATCGAGGTGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
....................................TGAATGCAAA-----AAGGCGAA-ATTCACAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
................TAACT--------ATCGAGGTGAATGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
....................................TGAATGCAAA-----AAGGCGAA-ATTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000001000000
........................................TGCAAA-----AAGGCGAA-ATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................1720.50100000000001000000
droSec2
GGCTTC----GTTTCGTAACT--------ATCGAGGTGAATACAAA-----AAGCCGAA-ATTCACAGGT-ATG-----------TTCA---ACATTCAA---TTTTTAAATT--CCAATGAGAA-TGAAACGTGCAATACAAAAGCCAATTTCTGA-TAATTTCTTTGT-CTT---------------------------------------------------TAAACTTAAATTATTTAGAGTGCTT--------TG------------------------------------------------------------------CT----AAAGAAAACACATTTTT---------AGCT-TT---TTTTGGAAAAGATTTAAG--------AACA--------ACTT--TTTATATTTTCT-TTACAATATTAATC-----------------------------------CTTTTTTTAC-----GAASizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
......................................................................................................................................................................................................................................TTAAATTATTTAGAGTGCT...................................................................................................................................................................................................................................................1911.0011000
............TTCGTAACT--------ATCGAGGTGAATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
.........................................ACAAA-----AAGCCGAA-ATTCACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
....................................................................................................................CAATGAGAA-TGAAACGTGCA...................................................................................................................................................................................................................................................................................................................................................................2011.0010100
...........................................AAA-----AAGCCGAA-ATTCACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
............................................AA-----AAGCCGAA-ATTCACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
...............................................................................................................................................................................................................................................................................................................................................GAAAACACATTTTT---------AGCT-.................................................................................................................................1811.0010010
.......................................ATACAAA-----AAGCCGAA-ATTCACAGGT-.....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
dm3
GGCTAC----GTTTCGTAACG--------ATCGAGGTGTATACAAA-G---AAGCCGAA-ATTCACAGGT-ATG-----------TAAA---GCATTTAA---TTTATAAATT--CCAATGAGAATTAAAACGTGCAATACAGAAGCCAATTTCTTA-TAATTTCTTTGT-CTT---------------------------------------------------TAAACTTAAATTATTTAGATTGCTT--------TC------------------------------------------------------------------CTATTAAAAAAAAAAACATTTTT---------AGCT-TTTTTTTTTCGAAAA--TTT--G--------AACA--------AATTTTTTTATATTTTCT-TTAAAACATTAATCCCTTTAACT-----------------------------TTTTTAC-----AAASizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
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.................AACG--------ATCGAGGTGTATACAAA-G---AAGCCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................CACAGGT-ATG-----------TAAA---GCATTTAA---T....................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AACG--------ATCGAGGTGTATACAAA-G---AAGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TAC----GTTTCGTAACG--------ATCGAGGTGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
................................GAGGTGTATACAAA-G---AAGCCGAA-A...............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TCGTAACG--------ATCGAGGTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GAGGTGTATACAAA-G---AAGCCGAA-ATTCAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TTCGTAACG--------ATCGAGGTGTATACAAC-.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................G--------ATCGAGGTGTATACAAA-G---A........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TCGAGGTGTATACAAA-G---AAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................ACAAA-G---AAGCCGAA-ATTCACAGGT-ATG-----------.......................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................ACG--------ATCGAGGTGTATACAAA-G---.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...............................................................CACAGGT-ATG-----------TAAA---GCATTTA.........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................AGGTGTATACAAA-G---AAGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................GT-ATG-----------TAAA---GCATTTAA---TTT..................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GGCTAC----GTTTCGTAACG--------ATCGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................G---AAGCCGAA-ATTCACAGGT-ATG-----------TAAA---G...............................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................AA-G---AAGCCGAA-ATTCACAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................TCGAGGTGTATACAAA-G---AAGCCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TTTCGTAACG--------ATCGAGGTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TTTCGTAACG--------ATCGAGGTGTATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................GTGTATACAAA-G---AAGCCGAA-ATTCAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AACG--------ATCGAGGTGTATACAAA-G---AAGCCATC-................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TAACG--------ATCGAGGTGTATACAAA-G---AAGCCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................AA-G---AAGCCGAA-ATTCACAGGT-.....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................CACAGGT-ATG-----------TAAA---GCATT...........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
.GCTAC----GTTTCGTAACG--------ATCGAGGTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AACG--------ATCGAGGTGTATACAAA-G---AA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
....AC----GTTTCGTAACG--------ATCGAGGTGTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
....................................................AGCCGAA-ATTCACAGGT-AT...................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GGTTCT----GTTCCAAAACG--------ATCGAGATATATACAAA-G---AATCCGAATATTCACAGGT-ATG-----------TTCA---ACCTTTAA---TTTG--------TCAATGAGAA-TAAAATATGCAACACAAAAGCCAATTTTTGG--ATTTTTTTTGT-TTA-T----------------CTTCCCGATTTTGTTTTTTTGTCGCCCAGATTCCATCTTTAAATTATTCAGAGAGCTTAAAAGTACTGCTGGTACATTTATATTTTATTTTAAAAATGTTGAAAATGCAGAAAATTATTGGTGAAAAACT----------------AACATTTTTTTT--TATTAT----------TTTTTAAAATTGTTTAAG--------TAGACTA------------------------TTACAATATATTTCCCTTTTACT----------------------------TATTTTACGGCTGGAASizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
.................AACG--------ATCGAGATATATACAAA-G---AATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
....................................................................................................................................................................................................................................................................................................GAAAATGCAGAAAATTATTGGT..................................................................................................................................................................................2211.0010001000
........................................TACAAA-G---AATCCGAATATTCACAGGT-T....................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
......................................TATACAAA-G---AATCCGAATATTCACAGGT-.....................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000001
droYak3
GGCTCT----GTTCCGAAACG--------ATCGAGATATATTCAAA-G---AAGCCGAAAATTTACAGGT-ATG-----------TTCA---AAATTTAA---TTTGTAAATT--CCAACAAGAA-TAATATGTGCAATA---AAACGAGTTTTTGA-AAATTTGTTTACTATA-TTTTAACAATCTGTTAACTGTCTTATTTTAAATTTTTGTCGCCCTGATTCAACCTTTAAATTATTGAAAGAGTT---------TGCTGGTACATTGGTACCAT-------------------TGTAGT--ACAATTGGTAAAAAGTTTAATCT----AAAGAAAACATTTTTTTTTTTACTATAATTGTA---TTTTCGAAAACATTTAAG--------CAGACTATTACTAC----TTTATATTTTCT-TTATAACATTTATC-----------------------------------CT-------C-----GAASizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
......................................................................................................................................................................................................................................TTAAATTATTGAAAGAGTT---------TGCTGGTA..................................................................................................................................................................................................................................2711.00100000010000
...................................ATATATTCAAA-G---AAGCCGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...............................................................................................................................................................................................................TTTTTGTCGCCCTGATTCAACCTTTAA..................................................................................................................................................................................................................................................................2711.00100100000000
..CTCT----GTTCCGAAACG--------ATCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...................................ATATATTCAAA-G---AAGCCGAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
.............................................................................................................................................................................................................................................ATTGAAAGAGTT---------TGCTGGC...................................................................................................................................................................................................................................1911.00100100000000
droTak1
GGACCT----TCT--GCAACT-----GG-GTCGAGTTAAAATCAAA-G---GAGTCTGA-AAAAAAAGGT-ATG-----------TTAA---ATATAAAATCTTTAATAAACTTGACCGCGAAAA-TAAAATATGTAATATGAAAACAACTTTCATAATATTTTCTTCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
ACTTTTAATTGTTC---GATTATTCTAGGACTT-GCTAAAAATAAAAGGGCAAATCTACGGACCCAAGGT-ATG-----------TTCAGAAATATTAAA---TTTATTATAA--ACCGTGAAAA-TAATATATGCAG-----AAACAATTTCTCAAATATTTCCTGCG--ATTAATACGACAGGGCCT---C--------------------------------TACCTGCATTTTATTTAAGGCAT----------CC------------------------------------------------------------------T---------------TATGACT---------AGAT-TCTGTGTTTCAAAAA--GTT--TATACTAATAATT--------AATGTTTTGATAATTTATACCAAAACAATAATCTTCCCAACTTTGTTAAATCGTCTTAACAGTTAAACAATCTGTTTA-----AAASizeHit CountTotal NormTotal
No Reads
droRho1
TTAGCA-ATTGCCCTGAAGGG--------ATATACTTAAAATAAAA-GGAGAAGTCAAG-GACTCTAGGT-ATG-----------TTAA-AAATATTTAA---TATAATATTT--AACATAAAAC-TAAAATATGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
GGAAGA-A--GTTACGTAA----------------------------------------------AAGGTAGTGTTCATTTTAAATTCCAAA---ATAGA---ATAATACAAA--ATTGTTTAAC-TAATATACA---------------TTTC------------------------------------------AGGTTTTTATTAT-------ATTGGATTCAAGCT-------ACTAAA-------AAAAACATTTCAGGTAC-----------------------------------------------------------------------------------------------------------------------------------------------------------AT-TAAAAATATCAGGT-----------------------------------TGTTTTTTAA-----ACASizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
No Reads

Generated: 05/19/2015 at 05:37 AM