ID:

dsi_21337

 Coordinate:

2r:20463637-20463731 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-21.7 -21.5 -21.5

Flybase annnotation

exon [2r_20463732_20463891_+]; CDS [2r_20463732_20463891_+]; CDS [2r_20463522_20463636_+]; exon [2r_20463498_20463636_+]; intron [2r_20463637_20463731_+]

No Repeatable elements found

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------##################################################
GGAGCGCGTTGCCGGAGGCTACAAATTCCACAAGACCTGCTTCAAGTGCAGTAAGTATGAGTGTCCTGCGGGACAGATCCTCTGGACTTGGTCCTTCGAGCAGGATAGCTAACGCAAACCCCACCTCGCCACTCTCCCCTTTCAGGCATGTGCAACAAGGCCCTGGACTCGACCAACTGCACGGAGCACGAGAAG
**************************************************..(((...((((((((((((((((.(((((...))).)).)))))....))))))..((....))..............)))))....)))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 GSM343915
embryo
 M053
female body
 SRR902009
testis
 M023
head
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 O002
Head
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
..............................................................................................................................................GCAGCATGTGCAACAAGGCCCTGGACTC......................... 28 3 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................CAACAAGGCCCTGGACTC......................... 18 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................GCAACAAGGCCCTGGACTC......................... 19 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................CCTGGACTCGACCAACTGCACGG........... 23 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................CTGGACTCGACCAACTGCACGG........... 22 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................AACAAGGCCCTGGACTCGACCAACTGCAC............. 29 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................AACAAGGCCCTGGACTCGAC...................... 20 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................................................CTGGACTCGACCAACTGCACGGA.......... 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................CTCGACCAACTGCACGGAG......... 19 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................CCTGGACTCGACCAACTGCACGGAG......... 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................GCAGCATGTGCAACAAGGCCCTGGACT.......................... 27 3 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................GGCCCTGGACTCGACCAACTGCACGG........... 26 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0
......................................................................................................................................................TGCAACAAGGCCCTGGACTC......................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................CCTGGACTCGACCAACTGC............... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................CGACCAACTGCACGGAGCAC...... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TGTGCAACAAGGCCCTGGACTC......................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................CTCGACCAACTGCACGGAGCA....... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................CAACAAGGCCCTGGACTCGACCAACTGC............... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......................AAATTCCACAACACTTGCTACAA...................................................................................................................................................... 23 3 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................AACAAGGCCCTGGACTCG........................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................ACAAATTCCACAAGACCTGCTT......................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................CAGCATGTGCAACAAGGCCCTGGACTC......................... 27 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................CCTGGACTCGACCAACTGCAC............. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................CAACAAGGCCCTGGACTCGACC..................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................CGACCAACTGCACGGAGCACGAGA.. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................AGCATGTGCAACAAGGCCCTGGACTC......................... 26 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
............................................................................................................................................................AAGGCCCTGGACTCGACC..................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................TAACAAAGCCCTGGACTAGAC...................... 21 3 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
..........................................................................................................................................................ACAAGGCCCTGGACTCGACC..................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................CCACAAGACCTGCTTCAAGTGCAG................................................................................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................GCCCTGGACTCGACCAACTGCACGGAGC........ 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................TGCAACAAGGCCCTGGAC........................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................GGACTCGACCAACTGCACGGAGCACGA.... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................AGTGTCCTGCGGGACAGATCCTCTGGAC............................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................CTACAAATTCCACAAGACCTGC........................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................ATGTGCAACAAGGCCCTGGACTC......................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................AAGGCCCTGGACTCGACCAACTGCAC............. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................TGCAACAAGGCCCTGGACTCGACCAAC.................. 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................AACAAGGCCCTGGACTCGACCAACT................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................GCAACAAGGCCCTGGACT.......................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................CTGCGGGACAGATCCTCT................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
....................................................................................................................................................TGTGCAACAAGGCCCTGTACTCGACC..................... 26 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................TGGACTCGACCAACTGCACGGAGCACGA.... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................GTGCAACAAGGCCCTGGACTCGAC...................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................CCCTGGACTCGACCAACTGCAC............. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................TGAGTGTCCCGCGGG........................................................................................................................... 15 1 6 0.67 4 0 0 0 0 0 0 3 0 0 0 1
......................................................................................................................................................................ACTAGACAAACTGCTCGGAGC........ 21 3 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
.............................................................TGTCATGCCGGACTGATCC................................................................................................................... 19 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 1
.............................ACAAGACCTGCTTCAATGGG.................................................................................................................................................. 20 3 10 0.10 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................GGTCCTGCGCGCAGGATA........................................................................................ 18 2 13 0.08 1 0 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

CCTCGCGCAACGGCCTCCGATGTTTAAGGTGTTCTGGACGAAGTTCACGTCATTCATACTCACAGGACGCCCTGTCTAGGAGACCTGAACCAGGAAGCTCGTCCTATCGATTGCGTTTGGGGTGGAGCGGTGAGAGGGGAAAGTCCGTACACGTTGTTCCGGGACCTGAGCTGGTTGACGTGCCTCGTGCTCTTC
**************************************************..(((...((((((((((((((((.(((((...))).)).)))))....))))))..((....))..............)))))....)))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 M023
head
 M025
embryo
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
........................................................................................ACCAGGAAGCTCGTCCTA......................................................................................... 18 0 3 2.67 8 3 0 0 3 2 0 0
........................................................................................ACCAGGAAGCTCGTC............................................................................................ 15 0 5 1.40 7 5 1 1 0 0 0 0
.......CAACGGCCTCCGATGTTTAAGGTGTT.................................................................................................................................................................. 26 0 1 1.00 1 0 0 1 0 0 0 0
.................................................................................................................................................................GGACCTGAGATGGTTGAC................ 18 1 2 1.00 2 0 2 0 0 0 0 0
.................................................................................................................................................................GGACCTGAGATGGTTG.................. 16 1 3 0.67 2 1 1 0 0 0 0 0
..................................................................................................................................................................GACCTGAGATGGTTGA................. 16 1 2 0.50 1 0 1 0 0 0 0 0
..................................................................................................................................................................GACCTGAGATGGTTGAC................ 17 1 2 0.50 1 1 0 0 0 0 0 0
.....................................................................CCCTGTCTAGGAGAG............................................................................................................... 15 1 5 0.40 2 0 0 2 0 0 0 0
.........................................................................................CCAGGAAGCTCGTCCGA......................................................................................... 17 1 3 0.33 1 0 0 1 0 0 0 0
..................GATGTTTAAGGTGTT.................................................................................................................................................................. 15 0 4 0.25 1 0 1 0 0 0 0 0
..........................................................................................CAGGAAGCTCGTCCT.......................................................................................... 15 0 4 0.25 1 1 0 0 0 0 0 0
...................................................................................................................................................................ACCTGAGATGGTTGA................. 15 1 9 0.22 2 1 1 0 0 0 0 0
.......................................................................................GACCAGGAAGCTCGTCCT.......................................................................................... 18 1 5 0.20 1 0 0 0 1 0 0 0
.......................................................................................AACCAGGAAGCTCGTC............................................................................................ 16 0 5 0.20 1 1 0 0 0 0 0 0
.......................................................................CTGTCTAGGAGACTT............................................................................................................. 15 1 7 0.14 1 0 1 0 0 0 0 0
....................................................................................................................................................................CCTGAGATGGTTGAC................ 15 1 8 0.13 1 0 1 0 0 0 0 0
..................................................................................................................................................................GCCCTGAGATGGTTGAC................ 17 2 8 0.13 1 0 0 0 0 0 1 0
.................................................................................................................................................................GGACCTGAGATGGTT................... 15 1 9 0.11 1 0 1 0 0 0 0 0
.................................................................................................................................................................GGACCTGAGATGGTCGAC................ 18 2 9 0.11 1 0 1 0 0 0 0 0
.....................................................................................CGAACCAGGAAGCTCG.............................................................................................. 16 1 9 0.11 1 1 0 0 0 0 0 0
........................................................................................ACCAGGAAGCTCGTCTAA......................................................................................... 18 2 11 0.09 1 0 0 0 1 0 0 0
.................................................................................................................................................................GGACCTGAGATGTTTGA................. 17 2 11 0.09 1 0 0 0 0 0 1 0
.....................................................................CCCTGTCTAGGAGATTCGA........................................................................................................... 19 3 15 0.07 1 0 1 0 0 0 0 0
...........................................................................................................................GGAGCGGGGAGAGGGTATAG.................................................... 20 3 19 0.05 1 0 0 0 0 0 0 1
....................................................................................CCGGACCAGGAAGCTCGGCCTA......................................................................................... 22 3 20 0.05 1 1 0 0 0 0 0 0
................................................................................................................................................................AGGACCTGAGATGGTTG.................. 17 2 20 0.05 1 0 1 0 0 0 0 0
.....................................................................CCCTGTCTAGGAGATT.............................................................................................................. 16 2 20 0.05 1 0 0 0 0 0 1 0
....................................................................................................................................AGTGGGGCAAGACCGTAC............................................. 18 3 20 0.05 1 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:20463587-20463781 + dsi_21337 GGAGCGCGTTGCCGGAGGCTACAAATTCCACAAGACCTGCTTCAAGTGCAGTAAGTATGA--GTGTCCTGCGGGACA------GATCCT------------CTGGACTTGGT---------------------------------------------CC------------TT-C-----------------------------------------------------------GAGCAGGATAGC----TAA--C-G-----------------------------CAAAC-CCCACCTC------GCCACTCTCCCC--TTTCAGGCATGTGCAACAAGGCCCTGGACTCGACCAACTGCACGGAGCACGAGAAG
droSec2 scaffold_5:215999-216193 + GGAGCGCGTTGCCGGAGGCTACAAATTCCACAAGACCTGCTTCAAGTGCAGTAAGTATGA--GTGTCCTGCGAGCCA------GATCGT------------CGGGACGTGGT---------------------------------------------CC------------TT-C-----------------------------------------------------------GAGCCGGATAGC----TAA--C-G-----------------------------AAAAC-CCCACCTC------GCCACTCTCCCC--TTTCAGGCATGTGCAACAAGGCCCTGGACTCGACCAACTGCACGGAGCACGAGAAG
dm3 chr2R:19962811-19963021 + GGAGCGCGTTGCCGGAGGCTACAAATTCCACAAGACCTGCTTCAAGTGCAGTAAGTATAA--ATGTCCTGCCAGCCA------GATCGT------------CTGGACTTGGT---------------------------------------------CC------------TT-CGAGT-CGG-----------------------------------------AT----------GTCGGATAGC----TAA--C-G---CAAAACCCTACCCCCCTCCCC------------------C------TCCACTCGCCCG--TTTCAGGCATGTGCAACAAGGCCCTGGACTCGACCAACTGCACGGAGCACGAGAAG
droEre2 scaffold_4845:21337986-21338178 + GGAGCGCGTTGCCGGAGGCTACAAATTCCACAAGACCTGCTTCAAGTGCAGTAAGTATAG--TGGCCCCTCGAGCCG------GATCGC------------CTGGCCTTGGT---------------------------------------------CC------------TT-C-----------------------------------------------------------GAGACGGATAGC----TAA--C-T-----------------------------CC-CT-CCCACC-T------TCCACCTGCCCG--TTTCAGGCATGTGCAACAAGGCCCTCGACTCGACCAACTGCACGGAGCACGAGAAG
droYak3 2R:19941636-19941820 + GGAGCGCGTTGCCGGAGGCTACAAATTCCACAAGACCTGCTTCAAGTGCAGTAAGTATTTT-TGGTCCCTCGAGCCG------GATCCC------------CTTGC-----T---------------------------------------------CC----------------------TTTC-----GAGGTCCT----------------------------------TCGTGGCGGATAAC----TAA--C-T-----------------------------AATG---------------C--------C-CG--TTTCAGGCATGTGCAACAAGGCCCTGGACTCGACCAACTGCACGGAGCACGAGAAG
droEug1 scf7180000409464:335858-336047 + GGAGCGCGTTGCCGGAGGCTACAAATTCCACAAGACCTGCTTCAAGTGCAGTAAGTATCT--TGGTCCTTCGAGTAG------AA-TGG------------CAGGACTTGGT---------------------------------------------CC------------CT-T-----------------------------------------------------------AAACCGGATAGCATTCTAAAACGTAAAC-------------------------AAAA------------AT----------C-TG-TTTCTAGGCATGTGCAACAAGGCCCTGGACTCGACCAACTGCACAGAGCACGAGAAG
droBia1 scf7180000302143:497909-498091 + GGAGCGCGTTGCCGGAGGCTACAAATTCCACAAGACCTGCTTCAAGTGCAGTAAGTACCC--TGGTCCTTCGAGCAG------GCTCCG------------CATGGCCTGGT---------------------------------------------CC------------TT-C-----------------------------------------------------------GAGACGGATGGC----TAAAAC-C-----------------------------AAAT------------CGCT--------T-CG--TTTCAGGCATGTGCAACAAGGCCCTGGACTCGACCAACTGCACGGAGCACGAGAAG
droTak1 scf7180000415666:18095-18278 + GGAGCGCGTTGCCGGAGGCTACAAATTCCACAAGACCTGCTTCAAGTGCAGTAAGTATCT--TGGTCCTTCGAGCAG------GATCTG------------CAGGACTTGGT---------------------------------------------CC------------TT-C-----------------------------------------------------------GAGCCGGATAGC----TAAAAC-T-----------------------------AAAA------------CCCT--------T-CG-TTTGCAGGCATGTGCAACAAGGCCCTGGACTCGACCAACTGCACGGAGCACGAGAAG
droEle1 scf7180000491214:5112110-5112287 - GGAGCGCGTTGCCGGAGGCTACAAATTCCACAAGACCTGCTTCAAGTGCAGTAAGTAGCT--TGGTCCTTCGAGCCACACACACAT---------------------TTGGT---------------------------------------------CC------------TT-C-----------------------------------------------------------GAACCGGATAGC----CAT--C-T-----------------------------AAAC------------ATCT--------C-CC--TTTTAGGCATGTGCAACAAGGCCCTGGACTCGACCAACTGCACGGAGCACGAGAAG
droRho1 scf7180000774050:11975-12153 - GGAGCGCGTTGCTGGAGGCTACAAATTCCACAAGACCTGCTTCAAGTGCAGTAAGTATTT--TGGTCCTTCGCGCCT------TAT---------------------TTGGT---------------------------------------------CC------------TT-C---------------GAAGT-------------------------------------TCGAACCGGATAGC----CAA--C-T-----------------------------AAAA------------ATCT--------C-CC--TTTCAGGCATGTGCAACAAGGCCCTGGACTCGACCAACTGCACAGAGCACGAGAAG
droFic1 scf7180000453858:1701930-1702106 + GGAGCGCGTTGCCGGCGGCTACAAATTCCACAAGACCTGCTTCAAGTGCAGTGAGTATTA--C--------------------GATCCA------------CAGGACCTGGT---------------------------------------------CT------------TT-C-----------------------------------------------------------GAGCCGGATCGTCGACTAACAC-G-----------------------------AAAACC--------CCCACT--------C-CG--TTTCAGGCATGTGCAACAAGGCCCTGGACTCGACCAACTGCACGGAGCACGAGAAG
droKik1 scf7180000302355:556750-556934 + GGAGCGCGTTGCCGGAGGCTACAAATTCCACAAGACTTGCTTCAAGTGCAGTAAGTGAT-------------------------------------------------------------------------------------------------------------------CGAA------------------------------ATGCCCCCACTC------------CCACTCTGGATAAT-----------A---CTCAGCAATGCCCCTCTAATCCTTCA-------------C------TCCCTCCTCCCC--CGCCAGGCATGTGCAACAAGGCTCTGGACTCGACAAACTGCACGGAGCACGAGAAG
droAna3 scaffold_13266:14438435-14438621 - GGAGCGCGTTGCCGGAGGCTACAAATTCCACAAGACCTGCTTCAAGTGCAGTAAGTATCC--CGGAAAT------CA------GATTTC------------TTTTC-----A---------------------------------------------CT----------------------TATC-----TCTCTCCC----------------------------------TAAATTTGGATAAA----AAA--T-TAAAT-------------------------A--A-------------------ATTTTCCCCTTTTACAGGCATGTGCAACAAGGCCCTGGACTCGACAAACTGCACGGAGCACGAGAAG
droBip1 scf7180000396428:397976-398155 + GGAGCGCGTTGCCGGAGGCTACAAATTCCACAAGACCTGCTTCAAGTGCAGTAAGTATCC--AGGACAA---------------------------------TGGATTT-----------------------------------------------------------------CGGATACGAGCTCCTCCT----------------------------------------CCAATTTGGATAAA----AAT--T-G-----------------------------AAAA-------------------ATTT-C-CCTTTTTCAGGCATGTGCAACAAGGCCCTGGACTCGACAAACTGCACGGAGCACGAGAAG
dp5 3:7654464-7654674 + GGAGCGCGTTGCTGGTGGCTACAAATTCCATAAAACATGCTTCAAGTGCAGTAAGTATTG--C--------GAG----AA-----TCCATAAACCAGAACTATGGCCTCGAT--------------------------------------------------------------CGAAT-CGATCTTTGCCTGGAGCAACATGGCATAACGT-----------TTTGCTTCTTCGT-----------------------------------------------------------------------TCCGTTTAATCA--CAAAAGGCATGTGCAACAAGGCTCTGGACTCCACAAACTGCACCGAGCATGAAAAG
droPer2 scaffold_2:7854278-7854487 + GGAGCGCGTTGCTGGTGGCTACAAATTCCATAAAACATGCTTCAAGTGCAGTAAGTATTG--C--------GAG----AA-----TCCATAAACCAGAACTATGGCCTCGAT--------------------------------------------------------------CGAAT-CGATCTTTGCCTGGAGCAACATGGCATAACGT-----------TTTGC--------------------------------------------TTT----CCG------------------T------TCCGTTTAATCA--CAAAAGGCATGTGCAACAAGGCTCTGGACTCCACAAACTGCACCGAGCATGAAAAG
droWil2 scf2_1100000004513:4989356-4989609 - GGAGCGCGTTGCTGGTGGCTACAAATTCCATAAAACTTGCTTCAAGTGCAGTAAGTATTT--GT-------GAA--------------ACAAATGTGTACCATGACCTACATATTTTATATGTACAATAATATGTATTCAAAACACACATATGTACATATGTACATCCCGCATCCGAAT-CTATTTTTACA----------------AACGTGCCC--TCCCATTTG-------------------------------------------------------------------------T------TTCATTGTTACC--TTCTAGGTATGTGCAACAAGGCCTTGGACTCCACAAATTGCACAGAGCACGAAAAG
droVir3 scaffold_12875:12138906-12139067 - AGAGCGCGTCGCTGGTGGCTACAAATTCCATAAAACTTGTTTTAAATGCAGTAAGTAGCTAATGATCCTC-----------------------------------------T---------------------------------------------TA------------TT-T-----------------------------------------------------------GAACAGCATAAA----TACAAA-T-----------------------------T--G----------ATCATT--------T-TC--TCAAAGGTATGTGCAATAAGGCTTTGGACTCAACAAATTGCACCGAGCATGAAAAG
droMoj3 scaffold_6496:14710490-14710654 + AGAGCGCGTTGCTGGTGGCTACAAATTCCATAAGACATGCTTCAAGTGCAGTAAGTAGAG--C------------CGTAA--------------------------------------------------------------------------------------------------A-CGAATTTCTTCCTGAGCAATATACCAAAATGT-----------GATGT--------------------------------------------TCC------------------------------------------TC--GAATAGGTATGTGCAATAAGGCCTTGGACTCGACAAACTGCACCGAGCACGAAAAG
droGri2 scaffold_15245:11972182-11972355 + GGAGCGTGTTGCTGGTGGCCACAAATACCATAAGACTTGCTTCAAGTGCAGTAAGTACAT--ACACACATAC----------------------------------------------------------------------ACACACACATGCATACA------------TG-T-----------------------------------------------------------GATCTAAAAAAT----TAC--T-T-----------------------------T---------------------TATAATTCCT--ATCAAGGTATGTGCAATAAGGCTCTGGATTCGACAAACTGCACCGAGCATGAAGCC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GGAGCGCGTTGCCGGAGGCTACAAATTCCACAAGACCTGCTTCAAGTGCAGTAAGTATGA--GTGTCCTGCGGGACA------GATCCT------------CTGGACTTGGT---------------------------------------------CC------------TT-C-----------------------------------------------------------GAGCAGGATAGC----TAA--C-G-----------------------------CAAAC-CCCACCTC------GCCACTCTCCCC--TTTCAGGCATGTGCAACAAGGCCCTGGACTCGACCAACTGCACGGAGCACGAGAAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................................................................................................................................................................................................................................CAACAAGGCCCTGGACTC.........................1814.00400400000000000000
.............................................................................................................................................................................................................................................................................................................................................GCAACAAGGCCCTGGACTC.........................1913.00300300000000000000
.......................................................................................................................................................................................................................................................................................................................................................CCTGGACTCGACCAACTGCACGG...........2313.00300300000000000000
........................................................................................................................................................................................................................................................................................................................................................CTGGACTCGACCAACTGCACGG...........2213.00300300000000000000
...............................................................................................................................................................................................................................................................................................................................................AACAAGGCCCTGGACTCGACCAACTGCAC.............2913.00300300000000000000
...............................................................................................................................................................................................................................................................................................................................................AACAAGGCCCTGGACTCGAC......................2012.00200100010000000000
........................................................................................................................................................................................................................................................................................................................................................CTGGACTCGACCAACTGCACGGA..........2312.00200200000000000000
.............................................................................................................................................................................................................................................................................................................................................................CTCGACCAACTGCACGGAG.........1912.00200010000000100000
.......................................................................................................................................................................................................................................................................................................................................................CCTGGACTCGACCAACTGCACGGAG.........2512.00200200000000000000
....................................................................................................................................................................................................................................................................................................................................................GGCCCTGGACTCGACCAACTGCACGG...........2612.00200000000000002000
............................................................................................................................................................................................................................................................................................................................................TGCAACAAGGCCCTGGACTC.........................2012.00200200000000000000
.......................................................................................................................................................................................................................................................................................................................................................CCTGGACTCGACCAACTGC...............1912.00200200000000000000
...............................................................................................................................................................................................................................................................................................................................................................CGACCAACTGCACGGAGCAC......2012.00200200000000000000
..........................................................................................................................................................................................................................................................................................................................................TGTGCAACAAGGCCCTGGACTC.........................2211.00100100000000000000
.............................................................................................................................................................................................................................................................................................................................................................CTCGACCAACTGCACGGAGCA.......2111.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................CAACAAGGCCCTGGACTCGACCAACTGC...............2811.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................AACAAGGCCCTGGACTCG........................1811.00100100000000000000
....................ACAAATTCCACAAGACCTGCTT...............................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
.......................................................................................................................................................................................................................................................................................................................................................CCTGGACTCGACCAACTGCAC.............2111.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................CAACAAGGCCCTGGACTCGACC.....................2211.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................CGACCAACTGCACGGAGCACGAGA..2411.00100000000000100000
..................................................................................................................................................................................................................................................................................................................................................AAGGCCCTGGACTCGACC.....................1811.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................ACAAGGCCCTGGACTCGACC.....................2011.00100100000000000000
...........................CCACAAGACCTGCTTCAAGTGCAG......................................................................................................................................................................................................................................................................................................................................2411.00100000000000100000
.....................................................................................................................................................................................................................................................................................................................................................GCCCTGGACTCGACCAACTGCACGGAGC........2811.00100000000000001000
............................................................................................................................................................................................................................................................................................................................................TGCAACAAGGCCCTGGAC...........................1811.00110000000000000000
..........................................................................................................................................................................................................................................................................................................................................................GGACTCGACCAACTGCACGGAGCACGA....2711.00100100000000000000
...........................................................A--GTGTCCTGCGGGACA------GATCCT------------CTGGAC..............................................................................................................................................................................................................................................................................2811.00100100000000000000
..................CTACAAATTCCACAAGACCTGC.................................................................................................................................................................................................................................................................................................................................................2211.00100000000000100000
.........................................................................................................................................................................................................................................................................................................................................ATGTGCAACAAGGCCCTGGACTC.........................2311.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................................AAGGCCCTGGACTCGACCAACTGCAC.............2611.00100100000000000000
............................................................................................................................................................................................................................................................................................................................................TGCAACAAGGCCCTGGACTCGACCAAC..................2711.00100000010000000000
...............................................................................................................................................................................................................................................................................................................................................AACAAGGCCCTGGACTCGACCAACT.................2511.00100100000000000000
.............................................................................................................................................................................................................................................................................................................................................GCAACAAGGCCCTGGACT..........................1811.00100100000000000000
...................................................................CTGCGGGACA------GATCCT------------CT..................................................................................................................................................................................................................................................................................1811.00100000100000000000
.........................................................................................................................................................................................................................................................................................................................................................TGGACTCGACCAACTGCACGGAGCACGA....2811.00100010000000000000
...........................................................................................................................................................................................................................................................................................................................................GTGCAACAAGGCCCTGGACTCGAC......................2411.00100100000000000000
......................................................................................................................................................................................................................................................................................................................................................CCCTGGACTCGACCAACTGCAC.............2211.00100100000000000000
droSec2
GGAGCGCGTTGCCGGAGGCTACAAATTCCACAAGACCTGCTTCAAGTGCAGTAAGTATGA--GTGTCCTGCGAGCCA------GATCGT------------CGGGACGTGGT---------------------------------------------CC------------TT-C-----------------------------------------------------------GAGCCGGATAGC----TAA--C-G-----------------------------AAAAC-CCCACCTC------GCCACTCTCCCC--TTTCAGGCATGTGCAACAAGGCCCTGGACTCGACCAACTGCACGGAGCACGAGAAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................GCTTCAAGTGCAGTAAGTATGA--GTG........................................................................................................................................................................................................................................................................................................................2511.0010001
................................................................................................................................................................................................................................................................................................................................................................GACCAACTGCACGGAGCAC......1911.0010010
.............................................................................................................................................................................................................................................................................................................................................................CTCGACCAACTGCACGGAGCACGAGAA.2711.0010010
dm3
GGAGCGCGTTGCCGGAGGCTACAAATTCCACAAGACCTGCTTCAAGTGCAGTAAGTATAA--ATGTCCTGCCAGCCA------GATCGT------------CTGGACTTGGT---------------------------------------------CC------------TT-CGAGT-CGG-----------------------------------------AT----------GTCGGATAGC----TAA--C-G---CAAAACCCTACCCCCCTCCCC------------------C------TCCACTCGCCCG--TTTCAGGCATGTGCAACAAGGCCCTGGACTCGACCAACTGCACGGAGCACGAGAAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................GGCTACAAATTCCACAAGAC.....................................................................................................................................................................................................................................................................................................................................................2016.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................ACAAGGCCCTGGACTCGACCAACTGC...............2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................TGGACTCGACCAACTGCACGGAG.........2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................GCAACAAGGCCCTGGACTC.........................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................ACTCGACCAACTGCACGGAGCA.......2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................CGACCAACTGCACGGAGC........1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................CGACCAACTGCACGGAGCACGAGA..2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.GAGCGCGTTGCCGGAGGCTACA..................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TGTGCAACAAGGCCCTGGACTCGACC.....................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................GACTTGGT---------------------------------------------CC------------TT-CGAGT-CGG-----------------------------------------AT----------GTCGG........................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
....................................................................................................................................................................................................................................................................................................................................................GGCCCTGGACTCGACCAAC..................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................CTCGACCAACTGCACGGAGCA.......2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000
....CGCGTTGCCGGAGGCTACA..................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................CAAGGCCCTGGACTCGACCAACT.................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................CGACCAACTGCACGGAGCACGAG...2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................ACAAGGCCCTGGACTCGACCAACT.................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................CGACCAACTGCACGGAGCACGAGAA.2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GCGTTGCCGGAGGCTACAA.................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................GACCAACTGCACGGAGCACG.....2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...GCGCGTTGCCGGAGGCTACAA.................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..AGCGCGTTGCCGGAGGCTACAA.................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................ATGTGCAACAAGGCCCTG..............................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................CC------------------C------TCCACTCGCCCG--TTTCAG..................................................2112.0020000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................GT-CGG-----------------------------------------AT----------GTCGGATAGC----TAA--C-G---....................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................AGGCCCTGGACTCGACCAAC..................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AGCGCGTTGCCGGAGGCTACAAATTC.............................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ACAAATTCCACAAGACCTGCTTCAA............................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................GACCAACTGCACGGAGCACGAGAAG2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................AACTGCACGGAGCACGAG...1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GCGTTGCCGGAGGCTACA..................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................GCATGTGCAACAAGGCCCTGGA............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AAATTCCACAAGACCTGCTTC..............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................AACAAGGCCCTGGACTCGACC.....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................CAACTGCACGGAGCACGAATC.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................AGGCCCTGGACTCGACCA....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................GCATGTGCAACAAGGCCCT...............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................AGGCCCTGGACTCGACCC....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................GCAACAAGGCCCTGGACTCGA.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AATTCCACAAGACCTGCTTCAAGT..........................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TTGCCGGAGGCTACAAATTCCACA.........................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
........................ATTCCACAAGACCTGCTTCAAGTGCA.......................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................GTGCAACAAGGCCCTGGACTC.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................CGACCAACTGCACGGAGCAC......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
GGAGCGCGTTGCCGGAGG.......................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................GCATGTGCAACAAGGCCCTGG.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................GGCCCTGGACTCGACCAACTGCACG............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................CAACTGCACGGAGCACGAGAA.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ATTCCACAAGACCTGCTTCAAG...........................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CGCGTTGCCGGAGGCTACAAATTCCACA.........................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................GCAACAAGGCCCTGGACTCGACC.....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TGCAACAAGGCCCTGGACTCGACC.....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................CGG-----------------------------------------AT----------GTCGGATAGC----TAA--C-G---CATC................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................GCCCTGGACTCGACCAACTGCAC.............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................GGCCCTGGACTCGACCAACT.................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GCGCGTTGCCGGAGGCTACA..................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................CGACCAACTGCACGGAGCACG.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................ACAAGGCCCTGGACTCGACCAA...................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AGCGCGTTGCCGGAGGCTACAAATT..............................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GAGCGCGTTGCCGGAGGC......................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
................................................................................................................................................................................................................................................................................................................................................ACAAGGCCCTGGACTCGACCA....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GTTGCCGGAGGCTACAAATTC.............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................ACTCGACCAACTGCACGGAGCACGAG...2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................GACCAACTGCACGGAGCACGAGA..2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................TGGACTCGACCAACTGCACGG...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GAGCGCGTTGCCGGAGGCT.....................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GCGCGTTGCCGGAGGCTACAAATT..............................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................TGGACTCGACCAACTGCACGGAGCAC......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.........TGCCGGAGGCTACAAATTC.............................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AGCGCGTTGCCGGAGGCTACAAA................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TGTGCAACAAGGCCCTGG.............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................CGACCAACTGCACGGAGCA.......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AATTCCACAAGACCTGCTTCA.............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................CCAACTGCACGGAGCACGAGA..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................CGACCAACTGCACGGAGCACGAGAAG2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................ATGTGCAACAAGGCCCTGGA............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................ACAAGGCCCTGGACTCGACC.....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................TGGACTCGACCAACTGCACGGAGCACGATC..3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................CGG-----------------------------------------AT----------GTCGGATAGC----TAA--C-G---CAATC...............................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................TTGGT---------------------------------------------CC------------TT-CGAGT-CGG-----------------------------------------A........................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AATTCCACAAGACCTGCTATC.............................................................................................................................................................................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GGAGCGCGTTGCCGGAGGCTACAAATTCCACAAGACCTGCTTCAAGTGCAGTAAGTATAG--TGGCCCCTCGAGCCG------GATCGC------------CTGGCCTTGGT---------------------------------------------CC------------TT-C-----------------------------------------------------------GAGACGGATAGC----TAA--C-T-----------------------------CC-CT-CCCACC-T------TCCACCTGCCCG--TTTCAGGCATGTGCAACAAGGCCCTCGACTCGACCAACTGCACGGAGCACGAGAAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................AACTGCACGGAGCACGAGAAG2112.0020101000
.............................................................................................................................................................................................................................................................................................................................................GCAACAAGGCCCTCGACT..........................1811.0010100000
.....GCGTTGCCGGAGGCTACAAATTCCAC..........................................................................................................................................................................................................................................................................................................................................................2611.0010001000
................................................................................................................................................................................................................................................................................................................................................................GACCAACTGCACGGAGCACGAGAA.2411.0010000100
........................................................................................................................................................................................................................................................................................................................................CATGTGCAACAAGGCCCTCGACTCGA.......................2611.0010100000
..........................TCCACAAGACCTGCTTCAAGTGC........................................................................................................................................................................................................................................................................................................................................2311.0010001000
........................................................................................................................................................................................................................................................................................................................................................CTCGACTCGACCAACTGCACGGA..........2311.0010000010
..............................................................................................................................................................................................................................................................................................................................................CAACAAGGCCCTCGACTCG........................1911.0010100000
......CGTTGCCGGAGGCTACAAATTCCACAA........................................................................................................................................................................................................................................................................................................................................................2711.0010000010
................................................................................................................................................................................................................................................................................................................................................ACAAGGCCCTCGACTCGACC.....................2011.0010000010
....................................................................................................................................................................................................................................................................................................................................................GGCCCTCGACTCGACCAACTGC...............2211.0011000000
.............................................................................................................................................................................................................................................................................................................................................GCAACAAGGCCCTCGACTC.........................1911.0011000000
....................ACAAATTCCACAAGACCTGCTTC..............................................................................................................................................................................................................................................................................................................................................2311.0011000000
...............................................................................................................................................................................................................................................................................................................................................AACAAGGCCCTCGACTCGACCAAC..................2411.0011000000
................................................................................................................................................................................................................................................................................................................................................ACAAGGCCCTCGACTCGACCAACTGCAC.............2811.0010100000
..........................................................................................................................................................................................................................................................................................................................................TGTGCAACAAGGCCCTCGACT..........................2111.0010100000
.......................................................................................................GGCCTTGGT---------------------------------------------CC------------TT-C-----------------------------------------------------------GAGACGG........................................................................................................................................2111.0010001000
..................CTACAAATTCCACAAGACCTGC.................................................................................................................................................................................................................................................................................................................................................2211.0010001000
...................................................................................................................................................................................................................................................................................................................................................................CAACTGCACGGAGCACGAGAA.2111.0010000010
.............................ACAAGACCTGCTTCAAGT..........................................................................................................................................................................................................................................................................................................................................1811.0010000010
...............................................................................................................................................................................................................................................................................................................................................AACAAGGCCCTCGACTCGACCAACT.................2511.0010100000
..............................................................................................................................................................................................................................................................................................................................................CAACAAGGCCCTCGACTC.........................1811.0010100000
.........................................................................................................................................................................................................................................................................................................................................................TCGACTCGACCAACTGCACGGAGCACGA....2811.0010000100
..............................................................................................................................................................................................................................................................................................................................................CAACAAGGCCCTCGACTCGACC.....................2211.0010100000
..........................................................................................................................................................................................................................................................................................................................................................CGACTCGACCAACTGCACGGAGC........2311.0010000010
......................................................................................................TGGCCTTGGT---------------------------------------------CC------------TT-C-----------------------------------------------------------GAGACGGA.......................................................................................................................................2311.0011000000
.............................................................................................................................................................................................................................................................................................................................................................CTCGACCAACTGCACGGAG.........1911.0010000010
............................................................................................................................................................................................................................................................................................................................................TGCAACAAGGCCCTCGACTCGACC.....................2411.0010100000
................................................................................................................................................................................................................................................................................................................................................................GACCAACTGCACGGAGCACGAGA..2311.0010000010
...........................................................................................................................................................................................................................................................................................................................................................GACTCGACCAACTGCACGGAGC........2211.0010001000
.............................................................................................................................................................................................................................................................................................................................................GCAACAAGGCCCTCGACTCGACCAAC..................2611.0010100000
...............................................................................................................................................................................................................................................................................................................................................AACAAGGCCCTCGACTCGACCAACTGC...............2711.0010100000
....................................................................................................................................................................................................................................................................................................................................................GGCCCTCGACTCGACCAACT.................2011.0010100000
....................................................................................................................................................................................................................................................................................................................................................GGCCCTCGACTCGACCAAC..................1911.0011000000
......................................................................................................................................................................................................................................................................................................CCACC-T------TCCACCTGCCCG--TTTCAG..................................................2411.0010000010
..................................................................................................................................................................................................................................................................................................................................................AAGGCCCTCGACTCGACCAAC..................2111.0010100000
........................ATTCCACAAGACCTGCTTCAAG...........................................................................................................................................................................................................................................................................................................................................2211.0010100000
............................CACAAGACCTGCTTCAAGTGCA.......................................................................................................................................................................................................................................................................................................................................2211.0010100000
droYak3
GGAGCGCGTTGCCGGAGGCTACAAATTCCACAAGACCTGCTTCAAGTGCAGTAAGTATTTT-TGGTCCCTCGAGCCG------GATCCC------------CTTGC-----T---------------------------------------------CC----------------------TTTC-----GAGGTCCT----------------------------------TCGTGGCGGATAAC----TAA--C-T-----------------------------AATG---------------C--------C-CG--TTTCAGGCATGTGCAACAAGGCCCTGGACTCGACCAACTGCACGGAGCACGAGAAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................................................................................................................................................................................................ATGTGCAACAAGGCCCTGGACT..........................2212.00220000000000
...................................................................................................................................................................................................................................................................................................................................................................CAACTGCACGGAGCACGAGA..2012.00201100000000
.............................................................................................................................................................................................................................................................................................................................................GCAACAAGGCCCTGGACTCGAC......................2211.00100100000000
....................................................................................................................................................................................................................................................................................................................................................GGCCCTGGACTCGACCAACT.................2011.00100100000000
...............................................................................................................................................................................................................................................................................................................................................................CGACCAACTGCACGGAGCACGAGA..2411.00100000010000
..........................................................................................................................................................................................................................................................................................................................................TGTGCAACAAGGCCCTGGACT..........................2111.00101000000000
.........TGCCGGAGGCTACAAATTCCACAAGACC....................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
.......................AATTCCACAAGACCTGCTTCAAGTGC........................................................................................................................................................................................................................................................................................................................................2611.00100100000000
...............................................................................................................................................................................................................................................................................................................................................AACAAGGCCCTGGACTCGACC.....................2111.00100100000000
....................................................................................................................................................................................................................................................................................................................................................GGCCCTGGACTCGACCAACTGC...............2211.00100100000000
..................................................................................................................................................................................................................................................................................................................................................................CCAACTGCACGGAGCACGAGA..2111.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................CCTGGACTCGACCAACTGCACGGA..........2411.00100100000000
..............................................................................................................................................................................................................................................................................................................................................................TCGACCAACTGCACGGAGCACGAGAAG2711.00100100000000
...........................................................................................................................................................................................................................................................................................................................................................GACTCGACCAACTGCACGGAGC........2211.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................GCCCTGGACTCGACCAACTGCA..............2211.00101000000000
........................ATTCCACAAGACCTGCTTCAAGC..........................................................................................................................................................................................................................................................................................................................................2311.00100100000000
...GCGCGTTGCCGGAGGCTACAAATTCCACAA........................................................................................................................................................................................................................................................................................................................................................3011.00100000010000
.......................................................................................................................................................................................................................................................................................................................................GCATGTGCAACAAGGCCCTGGACTCGACC.....................2911.00100100000000
.............................................................................................................................................................................................................................................................................................................................................................CTCGACCAACTGCACGGAGCA.......2111.00100000010000
...................................................................................................................................................................................................................................................................................................................................................AGGCCCTGGACTCGACCAACTGCACGGA..........2811.00110000000000
...............................................................................................................................................................................................................................................................................................................................................................CGACCAACTGCACGGAGCAC......2011.00101000000000
...................................................................................................................................................................................................................................................................................................................................................AGGCCCTGGACTCGACCAACT.................2111.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................CAACTGCACGGAGCACGAGAAG2211.00100000010000
................................................................................................................................................................................................................................................................................................................................................................GACCAACTGCACGGAGCACGAGA..2311.00100100000000
droEug1
GGAGCGCGTTGCCGGAGGCTACAAATTCCACAAGACCTGCTTCAAGTGCAGTAAGTATCT--TGGTCCTTCGAGTAG------AA-TGG------------CAGGACTTGGT---------------------------------------------CC------------CT-T-----------------------------------------------------------AAACCGGATAGCATTCTAAAACGTAAAC-------------------------AAAA------------AT----------C-TG-TTTCTAGGCATGTGCAACAAGGCCCTGGACTCGACCAACTGCACAGAGCACGAGAAGSizeHit CountTotal NormTotal
No Reads
droBia1
GGAGCGCGTTGCCGGAGGCTACAAATTCCACAAGACCTGCTTCAAGTGCAGTAAGTACCC--TGGTCCTTCGAGCAG------GCTCCG------------CATGGCCTGGT---------------------------------------------CC------------TT-C-----------------------------------------------------------GAGACGGATGGC----TAAAAC-C-----------------------------AAAT------------CGCT--------T-CG--TTTCAGGCATGTGCAACAAGGCCCTGGACTCGACCAACTGCACGGAGCACGAGAAGSizeHit CountTotal NormTotal
No Reads
droTak1
GGAGCGCGTTGCCGGAGGCTACAAATTCCACAAGACCTGCTTCAAGTGCAGTAAGTATCT--TGGTCCTTCGAGCAG------GATCTG------------CAGGACTTGGT---------------------------------------------CC------------TT-C-----------------------------------------------------------GAGCCGGATAGC----TAAAAC-T-----------------------------AAAA------------CCCT--------T-CG-TTTGCAGGCATGTGCAACAAGGCCCTGGACTCGACCAACTGCACGGAGCACGAGAAGSizeHit CountTotal NormTotal
No Reads
droEle1
GGAGCGCGTTGCCGGAGGCTACAAATTCCACAAGACCTGCTTCAAGTGCAGTAAGTAGCT--TGGTCCTTCGAGCCACACACACAT---------------------TTGGT---------------------------------------------CC------------TT-C-----------------------------------------------------------GAACCGGATAGC----CAT--C-T-----------------------------AAAC------------ATCT--------C-CC--TTTTAGGCATGTGCAACAAGGCCCTGGACTCGACCAACTGCACGGAGCACGAGAAGSizeHit CountTotal NormTotal
No Reads
droRho1
GGAGCGCGTTGCTGGAGGCTACAAATTCCACAAGACCTGCTTCAAGTGCAGTAAGTATTT--TGGTCCTTCGCGCCT------TAT---------------------TTGGT---------------------------------------------CC------------TT-C---------------GAAGT-------------------------------------TCGAACCGGATAGC----CAA--C-T-----------------------------AAAA------------ATCT--------C-CC--TTTCAGGCATGTGCAACAAGGCCCTGGACTCGACCAACTGCACAGAGCACGAGAAGSizeHit CountTotal NormTotal
No Reads
droFic1
GGAGCGCGTTGCCGGCGGCTACAAATTCCACAAGACCTGCTTCAAGTGCAGTGAGTATTA--C--------------------GATCCA------------CAGGACCTGGT---------------------------------------------CT------------TT-C-----------------------------------------------------------GAGCCGGATCGTCGACTAACAC-G-----------------------------AAAACC--------CCCACT--------C-CG--TTTCAGGCATGTGCAACAAGGCCCTGGACTCGACCAACTGCACGGAGCACGAGAAGSizeHit CountTotal NormTotal
No Reads
droKik1
GGAGCGCGTTGCCGGAGGCTACAAATTCCACAAGACTTGCTTCAAGTGCAGTAAGTGAT-------------------------------------------------------------------------------------------------------------------CGAA------------------------------ATGCCCCCACTC------------CCACTCTGGATAAT-----------A---CTCAGCAATGCCCCTCTAATCCTTCA-------------C------TCCCTCCTCCCC--CGCCAGGCATGTGCAACAAGGCTCTGGACTCGACAAACTGCACGGAGCACGAGAAGSizeHit CountTotal NormTotal
No Reads
droAna3
GGAGCGCGTTGCCGGAGGCTACAAATTCCACAAGACCTGCTTCAAGTGCAGTAAGTATCC--CGGAAAT------CA------GATTTC------------TTTTC-----A---------------------------------------------CT----------------------TATC-----TCTCTCCC----------------------------------TAAATTTGGATAAA----AAA--T-TAAAT-------------------------A--A-------------------ATTTTCCCCTTTTACAGGCATGTGCAACAAGGCCCTGGACTCGACAAACTGCACGGAGCACGAGAAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................................................................................................................................................................................ACAAGGCCCTGGACTCGACA.....................2014.004100003
...............................................................................................................................................................................................................................................................................................................................................................CGACAAACTGCACGGAGCAC......2013.003030000
.......................................................................................................................................................................................................................................................................................................................................GCATGTGCAACAAGGCCCTGGACTCGAC......................2812.002010001
....................................................................................................................................................................................................................................................................................................................................................GGCCCTGGACTCGACAAACT.................2012.002101000
..........................................................................................................................................................................................................................................................................................................................................TGTGCAACAAGGCCCTGGACTCG........................2312.002000002
........................ATTCCACAAGACCTGCTTCAAGT..........................................................................................................................................................................................................................................................................................................................................2312.002020000
.................................................................................................................................................................................................................................................................................................................................................CAAGGCCCTGGACTCGACA.....................1912.002200000
....................................................................................................................................................................................................................................................................................................................................................................AACTGCACGGAGCACGAGAA.2012.002200000
.............................................................................................................................................................................................................................................................................................................................................................CTCGACAAACTGCACGGA..........1812.002011000
.............................................................................................................................................................................................................................................................................................................................................GCAACAAGGCCCTGGACT..........................1811.001010000
.....................................................................................................................................................................................................................................................................................................................................................GCCCTGGACTCGACAAACTGCA..............2211.001100000
...................................................................................................................................................................................................................................................................................................................................................AGGCCCTGGACTCGACAAACC.................2111.001010000
...................................................................................................................................................................................................................................................................................................................................................AGGCCCTGGACTCGACAAACT.................2111.001100000
................................................................................................................................................................................................................................................................................................................................................................GACAAACTGCACGGAGCAC......1911.001010000
.............................................................................................................................................................................................................................................................................................................................................GCAACAAGGCCCTGGACTCGACA.....................2311.001010000
...GCGCGTTGCCGGAGGCTACAAATTCC............................................................................................................................................................................................................................................................................................................................................................2611.001010000
..................CTACAAATTCCACAAGACCTGCTTC..............................................................................................................................................................................................................................................................................................................................................2511.001010000
................................................................................................................................................................................................................................................................................................................................................ACAAGGCCCTGGACTCGACAAACT.................2411.001000001
...............................................................................................................................................................................................................................................................................................................................................AACAAGGCCCTGGACTCGA.......................1911.001001000
..............................................................................................................................................................................................................................................................................................................................................CAACAAGGCCCTGGACTC.........................1811.001010000
.......................................................................................................................................................................................................................................................................................................................................GCATGTGCAACAAGGCCCTGGACTC.........................2511.001010000
..........................................................................................................................................................................................................................................................................................................................................TGTGCAACAAGGCCCTGGACT..........................2111.001100000
....................ACAAATTCCACAAGACCTGCTT...............................................................................................................................................................................................................................................................................................................................................2211.001010000
.........................................................................................................................................................................................................................................................................................................................................................TGGACTCGACAAACTGCACGGAGC........2411.001100000
.........................................................................................................................................................................................................................................................................................................................................ATGTGCAACAAGGCCCTGGA............................2011.001000001
.............GGAGGCTACAAATTCCACAAGACCTGC.................................................................................................................................................................................................................................................................................................................................................2711.001010000
..............................................................................................................................................................................................................................................................................................................................................CAACAAGGCCCTGGACTCGA.......................2011.001000010
GGAGCGCGTTGCCGGAGG.......................................................................................................................................................................................................................................................................................................................................................................1811.001010000
....................ACAAATTCCACAAGACCTGCTTCAAGT..........................................................................................................................................................................................................................................................................................................................................2711.001010000
........................................................................................................................................................................................................................................................................................................................................CATGTGCAACAAGGCCCTGGACT..........................2311.001010000
..................CTACAAATTCCACAAGACCTGC.................................................................................................................................................................................................................................................................................................................................................2211.001010000
........................ATTCCACAAGACCTGCTTCAAGTGCA.......................................................................................................................................................................................................................................................................................................................................2611.001010000
..AGCGCGTTGCCGGAGGCT.....................................................................................................................................................................................................................................................................................................................................................................1811.001010000
........TTGCCGGAGGCTACAAATTCCACAA........................................................................................................................................................................................................................................................................................................................................................2511.001000001
.............................................................................................................................................................................................................................................................................................................................................GCAACAAGGCCCTGGACTCGACAAACT.................2711.001010000
......................AAATTCCACAAGACCTGCTTCAAGTGC........................................................................................................................................................................................................................................................................................................................................2711.001010000
.......GTTGCCGGAGGCTACAAATTCCA...........................................................................................................................................................................................................................................................................................................................................................2311.001010000
GGAGCGCGTTGCCGGAGGCTACA..................................................................................................................................................................................................................................................................................................................................................................2311.001100000
................................................................................................................................................................................................................................................................................................................................................................GACAAACTGCACGGAGCA.......1811.001010000
.....................................................................................................................................................................................................................................................................................................................................................GCCCTGGACTCGACAAACTGCAC.............2311.001010000
...........................................................................................................................................................................................................................................................................................................................................GTGCAACAAGGCCCTGGACTCGACA.....................2511.001100000
.....................CAAATTCCACAAGACCTGCTTCAAGTGC........................................................................................................................................................................................................................................................................................................................................2811.001010000
..............................CAAGACCTGCTTCAAGTGCAGC.....................................................................................................................................................................................................................................................................................................................................2211.001010000
...............................................................................................................................................................................................................................................................................................................................................................CGACAAACTGCACGGAGCACGAGA..2411.001000010
.....GCGTTGCCGGAGGCTACAAATTCCACAA........................................................................................................................................................................................................................................................................................................................................................2811.001001000
.............................................................................................................................................................................................................................................................................................................................................GCAACAAGGCCCTGGACTC.........................1911.001010000
...................................................................................................................................................................................................................................................................................................................................................AGGCCCTGGACTCGACAAACTGCACG............2611.001100000
........................................................................................................................................................................................................................................................................................................................................CATGTGCAACAAGGCCCTGGACTCGA.......................2611.001010000
.......................................................................................................................................................................................................................................................................................................................................GCATGTGCAACAAGGCCCTGGA............................2211.001010000
..........................................................................................................................................................................................................................................................................................................................................................GGACTCGACAAACTGCACGGAGCACG.....2611.001100000
...................TACAAATTCCACAAGACCTGCC................................................................................................................................................................................................................................................................................................................................................2211.001010000
..........................................................................................................................................................................................................................................................................................................................................................GGACTCGACAAACTGCACGGAGCAC......2511.001100000
................................................................................................................................................................................................................................................................................................................................................................GACAAACTGCACGGAGCACGAGAA.2411.001010000
...................................................................................................................................................................................................................................................................................................................................................................AAACTGCACGGAGCACGAGAAG2211.001000010
...........................................................................................................................................................................................................................................................................................................................................................GACTCGACAAACTGCACGGAGC........2211.001010000
................GGCTACAAATTCCACAAGACCTGC.................................................................................................................................................................................................................................................................................................................................................2411.001010000
..............GAGGCTACAAATTCCACAAGACCT...................................................................................................................................................................................................................................................................................................................................................2411.001010000
.............................................................................................................................................................................................................................................................................................................................................................CTCGACAAACTGCACGGAGCACGA....2411.001010000
................................................................................................................................................................................................................................................................................................................................................................GACAAACTGCACGGAGCACG.....2011.001000001
................................................................................................................................................................................................................................................................................................................................................ACAAGGCCCTGGACTCGA.......................1811.001010000
...............................AAGACCTGCTTCAAGTGC........................................................................................................................................................................................................................................................................................................................................1811.001010000
...GCGCGTTGCCGGAGGCTAC...................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.......................................................................................................................................................................................................................................................................................................................................GCATGTGCAACAAGGCCCTGGACTCGACA.....................2911.001100000
GGAGCGCGTTGCCGGAGGCT.....................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...................................................................................................................................................................................................................................................................................................................................................AGGCCCTGGACTCGACAAACTGCAC.............2511.001100000
.............................ACAAGACCTGCTTCAAGT..........................................................................................................................................................................................................................................................................................................................................1811.001001000
.........................TTCCACAAGACCTGCTTCAAGTGCAGC.....................................................................................................................................................................................................................................................................................................................................2711.001010000
...............................................................................................................................................................................................................................................................................................................................................AACAAGGCCCTGGACTCGACA.....................2111.001010000
.............................................................................................................................................................................................................................................................................................................................................................CTCGACAAACTGCACGGAGCAC......2211.001000010
...................................................................................................................................................................................................................................................................................................................................................AGGCCCTGGACTCGACAAACTGCA..............2411.001100000
.........................................................................................................................................................................................................................................................................................................................................ATGTGCAACAAGGCCCTGGACC..........................2211.001010000
.......................AATTCCACAAGACCTGCTTCAAGTGC........................................................................................................................................................................................................................................................................................................................................2611.001010000
..................CTACAAATTCCACAAGACC....................................................................................................................................................................................................................................................................................................................................................1911.001010000
................................................................................................................................................................................................................................................................................................................................................ACAAGGCCCTGGACTCGACAA....................2111.001000001
.............................................................................................................................................................................................................................................................................................................................................................CTCGACAAACTGCACGGAGCACGAGAA.2711.001010000
.....................................................................................................................................................................................................................................................................................................................................................................ACTGCACGGAGCACGAGAAG2011.001100000
.....................................................................................................................................................................................................................................................................................................................................................GCCCTGGACTCGACAAACTGCACGGAG.........2711.001000001
................................................................................................................................................................................................................................................................................................................................................................GACAAACTGCACGGAGCACGA....2111.001010000
....................................................................................................................................................................................................................................................................................................................................................................AACTGCACGGAGCACGAG...1811.001100000
........TTGCCGGAGGCTACAAATTCCACA.........................................................................................................................................................................................................................................................................................................................................................2411.001001000
...................................................................................................................................................................................................................................................................................................................................................AGGCCCTGGACTCGACAAAC..................2011.001100000
............................................................................................................................................................................................................................................................................................................................................TGCAACAAGGCCCTGGACTCGAC......................2311.001010000
...................TACAAATTCCACAAGACCTG..................................................................................................................................................................................................................................................................................................................................................2011.001010000
........................ATTCCACAAGACCTGCTTCAAGTGC........................................................................................................................................................................................................................................................................................................................................2511.001010000
...........................................................................................................................................................................................................................................................................................................................................................GACTCGACAAACTGCACGGAGCAC......2411.001010000
.............................................................................................................................................................................................................................................................................................................................................GCAACAAGGCCCTGGACTCGA.......................2111.001010000
..............................CAAGACCTGCTTCAAGTGC........................................................................................................................................................................................................................................................................................................................................1911.001010000
............................................................................................................................................................................................................................................................................................................................................TGCAACAAGGCCCTGGACT..........................1911.001001000
...........................CCACAAGACCTGCTTCAAGTGCAGC.....................................................................................................................................................................................................................................................................................................................................2511.001010000
droBip1
GGAGCGCGTTGCCGGAGGCTACAAATTCCACAAGACCTGCTTCAAGTGCAGTAAGTATCC--AGGACAA---------------------------------TGGATTT-----------------------------------------------------------------CGGATACGAGCTCCTCCT----------------------------------------CCAATTTGGATAAA----AAT--T-G-----------------------------AAAA-------------------ATTT-C-CCTTTTTCAGGCATGTGCAACAAGGCCCTGGACTCGACAAACTGCACGGAGCACGAGAAGSizeHit CountTotal NormTotal
No Reads
dp5
GGAGCGCGTTGCTGGTGGCTACAAATTCCATAAAACATGCTTCAAGTGCAGTAAGTATTG--C--------GAG----AA-----TCCATAAACCAGAACTATGGCCTCGAT--------------------------------------------------------------CGAAT-CGATCTTTGCCTGGAGCAACATGGCATAACGT-----------TTTGCTTCTTCGT-----------------------------------------------------------------------TCCGTTTAATCA--CAAAAGGCATGTGCAACAAGGCTCTGGACTCCACAAACTGCACCGAGCATGAAAAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................................................................................................................................................................................................................................................CTGGACTCCACAAACTGCACCGA..........2312.0020200000000
........................................................................................................................................................................................................................................................................................................................................CATGTGCAACAAGGCTCTGGA............................2112.0020200000000
........................................................................................................................................................................................................................................................................................................................................CATGTGCAACAAGGCTCTGGAC...........................2211.0010100000000
.......................................................................................................................................................................................................................................................................................................................................GCATGTGCAACAAGGCTCTGGACTCC........................2611.0010001000000
..................................................................................................................................................................................................................................................................................................................................................AAGGCTCTGGACTCCACAAACT.................2211.0010100000000
.........................................................................................................................................................................................................................................................................................................................................ATGTGCAACAAGGCTCTGGACTCCACA.....................2711.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................GGACTCCACAAACTGCACCGAGCATGAA...2811.0010100000000
..........................................................................................................................................................................................................................................................................................................................................TGTGCAACAAGGCTCTGGACTC.........................2211.0010100000000
...........................CCATAAAACATGCTTCAAG...........................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.......................................................................................................................................................................................................................................................................................................................................GCATGTGCAACAAGGCTCTGGAC...........................2311.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................GCTCTGGACTCCACAAACTGCACCGAG.........2711.0010100000000
.............................................................................................................................................................................................................................................................................................................................................GCAACAAGGCTCTGGACT..........................1811.0010000100000
..............................................................................................................................................................................................................................................................................................................................................................TCCACAAACTGCACCGAGCATGA....2311.0010100000000
...........................................................................................................................................................................................................................................................................................................................................GTGCAACAAGGCTCTGGACTC.........................2111.0010100000000
....CGCGTTGCTGGTGGCTACA..................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
................................................................................................................................................................................................................................................................................................................................................ACAAGGCTCTGGACTCCACAAACT.................2411.0010001000000
........................ATTCCATAAAACATGCTTCAAG...........................................................................................................................................................................................................................................................................................................................................2211.0010000010000
.................GCTACAAATTCCATAAAACAT...................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
.............................................................................................................GAT--------------------------------------------------------------CGAAT-CGATCTTTGCCTGGA......................................................................................................................................................................................2311.0010010000000
....................................................................................................................................................................................................................................................................................................................................................GGCTCTGGACTCCACAAACTGCAC.............2411.0010100000000
.........................................................................................................................................................................................................................................................................................................................................ATGTGCAACAAGGCTCTGGACTC.........................2311.0010100000000
................................................................................................................................................................................................................................................................................................................................................................CACAAACTGCACCGAGCA.......1811.0010000100000
......................AAATTCCATAAAACATGCTTC..............................................................................................................................................................................................................................................................................................................................................2111.0010000010000
.......................................................................................................................................................................................................................................................................................................................................GCATGTGCAACAAGGCTCTGGACT..........................2411.0010001000000
droPer2
GGAGCGCGTTGCTGGTGGCTACAAATTCCATAAAACATGCTTCAAGTGCAGTAAGTATTG--C--------GAG----AA-----TCCATAAACCAGAACTATGGCCTCGAT--------------------------------------------------------------CGAAT-CGATCTTTGCCTGGAGCAACATGGCATAACGT-----------TTTGC--------------------------------------------TTT----CCG------------------T------TCCGTTTAATCA--CAAAAGGCATGTGCAACAAGGCTCTGGACTCCACAAACTGCACCGAGCATGAAAAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................................................................................................................................................................................CTGGACTCCACAAACTGCACCGAGC........2518.008710000
......................................................................................................................................................................................................................................................................................................................................................CTCTGGACTCCACAAACT.................1814.004400000
..........................................................................................................................................................................................................................................................................................................................................TGTGCAACAAGGCTCTGGACT..........................2113.003300000
.......................................................................................................................................................................................................................................................................................................................................................TCTGGACTCCACAAACTGCACCGAGC........2613.003300000
.................................................................................................................................................................................................................................................................................................................................................CAAGGCTCTGGACTCCACAAACTGCACC............2813.003300000
.............................................................................................................................................................................................................................................................................................................................................GCAACAAGGCTCTGGACT..........................1813.003300000
.......................................................................................................................................................................................................................................................................................................................................GCATGTGCAACAAGGCTCTGGACT..........................2413.003300000
.......................................................................................................................................................................................................................................................................................................................................................TCTGGACTCCACAAACTGCACC............2213.003300000
........................................................................................................................................................................................................................................................................................................................................CATGTGCAACAAGGCTCTGGA............................2112.002200000
..................................................................................................................................................................................................................................................................................................................................................AAGGCTCTGGACTCCACAAACTGCACC............2712.002200000
.................................................................................................................................................................................................................................................................................................................................................CAAGGCTCTGGACTCCACAAACT.................2312.002200000
...............................................................................................................................................................................................................................................................................................................................................AACAAGGCTCTGGACTCCACAAACT.................2511.001100000
......................................................................................................................................................................................................................................................................................................................................................CTCTGGACTCCACAAACTGCACC............2311.001100000
........................................................................................................................................................................................................................................................................................................................................CATGTGCAACAAGGCTCTGGACT..........................2311.001100000
.........................................................................................................................................................................................................................................................................................................................................ATGTGCAACAAGGCTCTGGACTC.........................2311.001010000
........................................................................................................................................................................................................................................................................................................................................................CTGGACTCCACAAACTGCACCGAGCAC......2711.001100000
.........................................................................................................................................................................................................................................................................................................................................ATGTGCAACAAGGCTCTGGACT..........................2211.001100000
........................................................................................................................................................................................................................................................................................................................................................CTGGACTCCACAAACTGCACCGG..........2311.001100000
........................................................................................................................................................................................................................................................................................................................................................CTGGACTCCACAAACTGCACCGAG.........2411.001100000
..................................................................................................................................................................................................................................................................................................................................................AAGGCTCTGGACTCCACAAACTG................2311.001100000
......................................................................................................................................................................................................................................................................................................................................................CTCTGGACTCCACAAACTGCACCGAGC........2711.001100000
..............................................................................................................................................................................................................................................................................................................................................CAACAAGGCTCTGGACTCCACAAACT.................2611.001100000
........................................................................................................................................................................................................................................................................................................................................................CTGGACTCCACAAACTGCACCGA..........2311.001100000
.............................................................................................................................................................................................................................................................................................................................................GCAACAAGGCTCTGGACTCCACAAACT.................2711.001100000
.GAGCGCGTTGCTGGTGGCTACA..................................................................................................................................................................................................................................................................................................................................................................2211.001010000
........................................................................................................................................................................................................................................................................................................................................CATGTGCAACAAGGCTCTGGACC..........................2311.001100000
........................................................................................................................................................................................................................................................................................................................................................CTGGACTCCACAAACTGCACCGAGCAT......2711.001100000
...............................................................................................................................................................................................................................................................................................................................................AACAAGGCTCTGGACTCCACAAAC..................2411.001100000
.......................................................................................................................................................................................................................................................................................................................................................TCTGGACTCCACAAACTGCACCGA..........2411.001100000
...............................................................................................................................................................................GAAT-CGATCTTTGCCTGGAGCAACAT...............................................................................................................................................................................2611.001100000
...........................................................................................................................................................................................................................................................................................................................................GTGCAACAAGGCTCTGGACT..........................2011.001100000
.........................................................................................................................................................................................................................................................................................................................................ATGTGCAACAAGGCTCTGGACTCCA.......................2511.001100000
.......................................................................................................................................................................................................................................................................................................................................................................TGCACCGAGCATGAAAAG1811.001000001
......................................................................................................................................................................................................................................................................................................................................................CTCTGGACTCCACAAACTGCACCG...........2411.001100000
................................AAACATGCTTCAAGTGCAGC.....................................................................................................................................................................................................................................................................................................................................2020.501001000
droWil2
GGAGCGCGTTGCTGGTGGCTACAAATTCCATAAAACTTGCTTCAAGTGCAGTAAGTATTT--GT-------GAA--------------ACAAATGTGTACCATGACCTACATATTTTATATGTACAATAATATGTATTCAAAACACACATATGTACATATGTACATCCCGCATCCGAAT-CTATTTTTACA----------------AACGTGCCC--TCCCATTTG-------------------------------------------------------------------------T------TTCATTGTTACC--TTCTAGGTATGTGCAACAAGGCCTTGGACTCCACAAATTGCACAGAGCACGAAAAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................................................................................................................................................................................................................CTTGGACTCCACAAATTGCACAGA..........2412.00220000
........................................................................................................................................................................................................................................................................................................................................................TTGGACTCCACAAATTGCACAGA..........2312.00220000
...........................................................................................................................................................................................................................................................................................................................................................GACTCCACAAATTGCACAGAGC........2212.00200020
.............................................................................................................................................................................................................................................................................................................................................................CTCCACAAATTGCACAGAGC........2012.00200011
...GCGCGTTGCTGGTGGCTACAAATT..............................................................................................................................................................................................................................................................................................................................................................2412.00200020
................................................................................................................................................................................................................................................................................................................................................ACAAGGCCTTGGACTCCA.......................1812.00220000
...........................................................................................................................................................................................................................................................................................................................................................GACTCCACAAATTGCACAGA..........2011.00100010
.......................................................................................................................................................................................................................................................................................................................................GTATGTGCAACAAGGCCTTGGACTCC........................2611.00110000
..........................................................................................................................................................................................................................................................................................................................................TGTGCAACAAGGCCTTGGACTCCACAAA...................2811.00101000
GGAGCGCGTTGCTGGTGGC......................................................................................................................................................................................................................................................................................................................................................................1911.00100001
.............................................................................................................................................................................................................................................................................................................................................................CTCCACAAATTGCACAGAGCA.......2111.00100100
........................................................................................................................................................................................................................................................................................................................................................TTGGACTCCACAAATTGCACAGAGCACG.....2811.00101000
.......................................................................................................................................................................................................................................................................................................................................GTATGTGCAACAAGGCCTTGGA............................2211.00100001
............................CATAAAACTTGCTTCAAGTGCAGT.....................................................................................................................................................................................................................................................................................................................................2411.00100010
..AGCGCGTTGCTGGTGGCTACAAATTCCA...........................................................................................................................................................................................................................................................................................................................................................2811.00100100
...........................................................................................................................................................................................................................................................................................................................................................GACTCCACAAATTGCACAGAGCAC......2411.00100100
...............................................................................................................................................................................................................................................................................................................................................AACAAGGCCTTGGACTCCACAAATTGCA..............2811.00101000
......................................................................................................................................................................................................................................................................................................................................................CCTTGGACTCCACAAATTGCAC.............2211.00100001
.......................................................................................................................................................................................................................................................................................................................................GTATGTGCAACAAGGCCTTGGACTCCA.......................2711.00110000
...GCGCGTTGCTGGTGGCTACAA.................................................................................................................................................................................................................................................................................................................................................................2111.00101000
...........................................................................................................................................................................................................................CCCATTTG-------------------------------------------------------------------------T------TTCATTGTTACC--TTCTAG..................................................2711.00100010
.......................................................................................................................................................................................................................................................................................................................................................CTTGGACTCCACAAATTGCACA............2211.00110000
..............................TAAAACTTGCTTCAAGTGCAGT.....................................................................................................................................................................................................................................................................................................................................2211.00100010
............................................AGTGCAGTAAGTATTT--GT-------GAA--------------AC...............................................................................................................................................................................................................................................................................................2311.00100010
...........................................................................................................................................................................................................................................................................................................................................GTGCAACAAGGCCTTGGACTCCACAA....................2611.00101000
...........................................................................................................................................................................................................................................................................................................................................................GACTCCACAAATTGCACAGAGCA.......2311.00100010
......................................................................................................................................................................................................................................................................................................................................................CCTTGGACTCCACAAATTGCACA............2311.00100010
...................................................................................................................................................................................................................................................................................................................................................AGGCCTTGGACTCCACAAATTGCACAG...........2711.00110000
.............................................................................................................................................................................................................................................................................................................................................GCAACAAGGCCTTGGACT..........................1811.00100010
.......................................................................................................................................................................................................................................................................................................................................GTATGTGCAACAAGGCCTTG..............................2011.00100010
......................AAATTCCATAAAACTTGCTTCAAGT..........................................................................................................................................................................................................................................................................................................................................2511.00100010
..........................................................................................................................................................................................................................................................................................................................................................GGACTCCACAAATTGCACAGAGC........2311.00100010
........................................................................................................................................................................................................................................................................................................................................................TTGGACTCCACAAATTGCACA............2111.00110000
.............................ATAAAACTTGCTTCAAGT..........................................................................................................................................................................................................................................................................................................................................1811.00100010
....................................................................................................................................................................................................................................................................................................................................................................AATTGCACAGAGCACGAAAA.2011.00100100
......................................................................................................................................................................................................................................................................................................................................................CCTTGGACTCCACAAATTGCA..............2111.00101000
.........................................................................................................................................................................................................................................................................................................................................................TGGACTCCACAAATTGCACAGAGC........2411.00100001
........................................................................................................................................................................................................................................................................................................................................TATGTGCAACAAGGCCTTG..............................1911.00101000
..................................................................................................................................................................................................................................................................................................................................................AAGGCCTTGGACTCCACAAATTGCACA............2711.00101000
........................................................................................................................................................................................................................................................................................................................................TATGTGCAACAAGGCCTTGGA............................2111.00101000
................................................................................................................................................................................................................................................................................................................................................ACAAGGCCTTGGACTCCACAAATTGCACA............2911.00110000
droVir3
AGAGCGCGTCGCTGGTGGCTACAAATTCCATAAAACTTGTTTTAAATGCAGTAAGTAGCTAATGATCCTC-----------------------------------------T---------------------------------------------TA------------TT-T-----------------------------------------------------------GAACAGCATAAA----TACAAA-T-----------------------------T--G----------ATCATT--------T-TC--TCAAAGGTATGTGCAATAAGGCTTTGGACTCAACAAATTGCACCGAGCATGAAAAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................................................................................................................................................................................................................AATAAGGCTTTGGACTCAACAAA...................2312.002000100000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................CAACAAATTGCACCGAGCATGAAAA.2512.002000000000000000000100100000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................TTGCACCGAGCATGAAAAG1912.002000000000000000000000000000000000000000000000000000000000000002
..........................................................................................................................................................................................................................................................................................................................................TGTGCAATAAGGCTTTGGACT..........................2111.001000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................CAAATTGCACCGAGCATGAAAA.2211.001000000000000001000000000000000000000000000000000000000000000000
.......GTCGCTGGTGGCTACAAATTCCAT..........................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000001000
.........CGCTGGTGGCTACAAATTC.............................................................................................................................................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TCAACAAATTGCACCGAGC........1911.001000000000000000000100000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................ACTCAACAAATTGCACCGAGC........2111.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................GCAATAAGGCTTTGGACT..........................1811.001000000000000000000000000000000000000000000100000000000000000000
...............................................................................................................................................................................................................................................................................................................................................AATAAGGCTTTGGACTCAACAAATTGC...............2711.001000000000000000010000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................ACAAATTGCACCGAGCATGA....2011.001000000000000000000000000000000000000000000000000000000000000100
..............................................................................................................................................................................................................................................................................................................................................................TCAACAAATTGCACCGAGCAT......2111.001000000000000000000000000000000000000000000000000000000000001000
..................................................................................................................................................................................................................................................................................................................................................AAGGCTTTGGACTCAACAAATTGC...............2411.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................CAACAAATTGCACCGAGCATGAAA..2411.001000000000000001000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................ATGTGCAATAAGGCTTTGGACT..........................2211.001000000000000000001000000000000000000000000000000000000000000000
......CGTCGCTGGTGGCTACAAATTCCA...........................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000100
....CGCGTCGCTGGTGGCTAC...................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
.GAGCGCGTCGCTGGTGGC......................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000010000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................GTGCAATAAGGCTTTGGACT..........................2011.001000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................................................................................................................................................ATAAGGCTTTGGACTCAACAA....................2111.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................AATAAGGCTTTGGACTCAACAAATT.................2511.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TGTGCAATAAGGCTTTGGA............................1911.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................AAGGCTTTGGACTCAACAAATTGCA..............2511.001001000000000000000000000000000000000000000000000000000000000000
..............................TAAAACTTGTTTTAAATGCAG......................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000100000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................AAGGCTTTGGACTCAACAAATTGCACC............2711.001000100000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................CAAATTGCACCGAGCATGAAAAG2311.001000000000000000000100000000000000000000000000000000000000000000
.GAGCGCGTCGCTGGTGGCTACAA.................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000010000000000000000000000000000000000000000
.....................CAAATTCCATAAAACTTGTTTTAAA...........................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
....CGCGTCGCTGGTGGCTACAAATTCCAT..........................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000001000
droMoj3
AGAGCGCGTTGCTGGTGGCTACAAATTCCATAAGACATGCTTCAAGTGCAGTAAGTAGAG--C------------CGTAA--------------------------------------------------------------------------------------------------A-CGAATTTCTTCCTGAGCAATATACCAAAATGT-----------GATGT--------------------------------------------TCC------------------------------------------TC--GAATAGGTATGTGCAATAAGGCCTTGGACTCGACAAACTGCACCGAGCACGAAAAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................................................................................................................................................................................................................................................................ATGTGCAATAAGGCCTTGG.............................1911.001000100
...GCGCGTTGCTGGTGGCTACA..................................................................................................................................................................................................................................................................................................................................................................2011.001100000
................GGCTACAAATTCCATAAGACATGC.................................................................................................................................................................................................................................................................................................................................................2411.001000010
.......................................................................................................................................................................................................................................................................................................................................................CTTGGACTCGACAAACTGCACCGA..........2411.001000010
........................................................................................................................................................................................................................................................................................................................................TATGTGCAATAAGGCCTTGGACT..........................2311.001010000
...........................................................................................................................................................................................................................................................................................................................................................GACTCGACAAACTGCACCGAG.........2111.001100000
..AGCGCGTTGCTGGTGGCTACAAA................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.............................................................................................................................................................................................................................................................................................................................................GCAATAAGGCCTTGGACTCGACAAAC..................2611.001100000
...............................................................................................................................................................................................................................................................................................................................................................CGACAAACTGCACCGAGCACGAAA..2411.001000010
..................................................................................................................................................................................................................................................................................................................................................AAGGCCTTGGACTCGACA.....................1811.001001000
.............................ATAAGACATGCTTCAAGTGC........................................................................................................................................................................................................................................................................................................................................2011.001010000
.....GCGTTGCTGGTGGCTACAAATTCC............................................................................................................................................................................................................................................................................................................................................................2411.001000010
...........................................................................................................................................................................................................................................................................................................................................GTGCAATAAGGCCTTGGACT..........................2011.001000010
droGri2
GGAGCGTGTTGCTGGTGGCCACAAATACCATAAGACTTGCTTCAAGTGCAGTAAGTACAT--ACACACATAC----------------------------------------------------------------------ACACACACATGCATACA------------TG-T-----------------------------------------------------------GATCTAAAAAAT----TAC--T-T-----------------------------T---------------------TATAATTCCT--ATCAAGGTATGTGCAATAAGGCTCTGGATTCGACAAACTGCACCGAGCATGAAGCCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..............................................................................................................................................................................................................................................................................................................................................CAATAAGGCTCTGGATTCG........................1911.00101

Generated: 05/18/2015 at 09:30 PM