ID:

dsi_21322

 Coordinate:

2r:6795752-6795886 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [2r_6795887_6796031_+]; CDS [2r_6795887_6796031_+]; exon [2r_6795365_6795751_+]; CDS [2r_6795365_6795751_+]; intron [2r_6795752_6795886_+]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------##################################################
AAAATCGAGATCGGTTCGGCCAACGGAGCTACCCATGCGGAGGATCACAAGTGAGCATTATAAATATTTAATAATTTTCTAAAAACCTATAGTTGCAATAAAACTATATCAGATTGAATTGAAGTACAGTTTGGCTTATCTCAAACTAAGGATAGATTATTTTAGTAACACCTATGCCTTTCCAGATTTCAGTACATTTTGGCAGCGGCCACTTCGATCGCCACCAAGAACAATG
**************************************************((((((((((........))))...............(((((((.......))))))).(((((((.((....)).)))))))))))))........((((((((.((((....))))...)))).)))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M024
male body		 M053
female body
 M023
head
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
...ATCGAGATCGGTTCGGCC...................................................................................................................................................................................................................... 18 0 1 4.00 4 2 2 0 0 0 0 0
AAAATCGAGATCGGTTCGGCCAAC................................................................................................................................................................................................................... 24 0 1 2.00 2 1 1 0 0 0 0 0
...ATCGAGATCGGTTCGGCCAAC................................................................................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0
..AATCGAGATCGGTTCGGCCAAC................................................................................................................................................................................................................... 22 0 1 2.00 2 0 2 0 0 0 0 0
AAAATCGAGATCGGTTCGGC....................................................................................................................................................................................................................... 20 0 1 2.00 2 0 0 0 2 0 0 0
......GAGATCGGTTCGGCCAACGGAGCT............................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 1 0 0 0 0
...ATCGAGATCGGTTCGGCCAACGGAGC.............................................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0
AAAATCGAGATCGGTTCGGCCAACGGA................................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0
..AATCGAGATCGGTTCGGCCAACGGA................................................................................................................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0 0
..................................................................................................................................................................................................................ACTTCGATCGCCACCAAGAACAAT. 24 0 1 1.00 1 0 1 0 0 0 0 0
.AAATCGAGATCGGTTCGGCCAAC................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
.....CGAGATCGGTTCGGCCAAC................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................................CACTTCGATTGCCACCAAGAACAATG 26 1 1 1.00 1 0 0 0 0 1 0 0
...................................................................................................................................................................................................ATTTTGGCAGCGGCCACTTCGATCGCC............. 27 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................GTACATTTTGGCAGCGGCCACTT..................... 23 0 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................................................................................................CACAAATTTCAGTACATTTTGGCAGC............................. 26 3 1 1.00 1 0 0 1 0 0 0 0
.................................................................................................................................................................................................ACATTTTGGCAGCGGCCACTTCGAT................. 25 0 1 1.00 1 0 0 1 0 0 0 0
..................GCCAACGGAGCTACCCATGCGGAGGAT.............................................................................................................................................................................................. 27 0 1 1.00 1 0 0 1 0 0 0 0
.........................................................................................................................................................................................................GCAGCGGCCATATCGAGCGCCA............ 22 3 4 0.25 1 0 0 0 0 0 1 0
..........................................................................................................................................................................................................CAGCGGCCAGTTCGTTCGGC............. 20 3 6 0.17 1 0 1 0 0 0 0 0
..................................................................................................................................................................................................................ACTTCGATCGTCTTCAAGA...... 19 3 19 0.11 2 0 0 0 2 0 0 0
..................................................................................................TAAAACTGGATCAGATAGAA..................................................................................................................... 20 3 12 0.08 1 0 0 0 0 0 0 1
..................................ATTCGGAGGAACACCAGTG...................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1 0 0

Anti-sense strand reads

TTTTAGCTCTAGCCAAGCCGGTTGCCTCGATGGGTACGCCTCCTAGTGTTCACTCGTAATATTTATAAATTATTAAAAGATTTTTGGATATCAACGTTATTTTGATATAGTCTAACTTAACTTCATGTCAAACCGAATAGAGTTTGATTCCTATCTAATAAAATCATTGTGGATACGGAAAGGTCTAAAGTCATGTAAAACCGTCGCCGGTGAAGCTAGCGGTGGTTCTTGTTAC
**************************************************((((((((((........))))...............(((((((.......))))))).(((((((.((....)).)))))))))))))........((((((((.((((....))))...)))).)))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
.TTTAGCTCTAGCCAAG.......................................................................................................................................................................................................................... 16 0 1 1.00 1 1 0 0 0 0 0
...........................................TAGTGCTCACTCGTAAGATTTGT......................................................................................................................................................................... 23 3 1 1.00 1 0 0 1 0 0 0
.........................................................................................................................TTCGTGTCACACCGCATAGAGT............................................................................................ 22 3 2 1.00 2 2 0 0 0 0 0
...................GGTTGCATCGATGGG......................................................................................................................................................................................................... 15 1 1 1.00 1 0 1 0 0 0 0
..........................................................................................................................................AGAGTATGATTCCTGTC................................................................................ 17 2 6 0.50 3 3 0 0 0 0 0
........................................................................................................................CTTCGTGTCACACCGCATAGAGTT........................................................................................... 24 3 2 0.50 1 1 0 0 0 0 0
......CTCTAGCAAAGCCGG...................................................................................................................................................................................................................... 15 1 7 0.29 2 0 2 0 0 0 0
....AACTCTAGCAAAGCCGG...................................................................................................................................................................................................................... 17 2 20 0.20 4 1 2 0 1 0 0
............................................................................................................................................................AATAAGATCATTGAGGAT............................................................. 18 2 9 0.11 1 0 0 0 1 0 0
........................................TGCTAGAGTTCACTCGCAA................................................................................................................................................................................ 19 3 10 0.10 1 0 0 0 0 1 0
.....ACTCTAGCAAAGCCGG...................................................................................................................................................................................................................... 16 2 20 0.10 2 0 2 0 0 0 0
..................CGGTTGACTCGATGG.......................................................................................................................................................................................................... 15 1 16 0.06 1 0 1 0 0 0 0
..TAAGCTCTAGCCAAG.......................................................................................................................................................................................................................... 15 1 16 0.06 1 1 0 0 0 0 0
...................GGTTGACTCGATGTGTGCG..................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 1 0 0
.....................................GCCGCCTAGTGATCA....................................................................................................................................................................................... 15 2 20 0.05 1 0 1 0 0 0 0
...........................................................................................................................................GAGTATGATTCCTGTC................................................................................ 16 2 20 0.05 1 0 0 0 0 0 1
....AACTCTAGCCAAGGCG....................................................................................................................................................................................................................... 16 2 20 0.05 1 0 1 0 0 0 0
.............................................................................AGACTTTTGGATCTCAA............................................................................................................................................. 17 2 20 0.05 1 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:6795702-6795936 + dsi_21322 AAAATCGAGATCGGTTCGGCCAACGG---AGCTACCCATGCGGAGGATCACAAGTGAGCATTATA-------A-----------------------------------------------------------ATA-----------------------------------------------TTTAA---------------TAATTTTCTAAAAACCTATAGTTGCAA-TAAAACT--ATATCAGATTGAATTGAAGTACAGTTTGGCTTATCT----------CAA---------ACTAA---------------------------------------------------------------------------------------GGATAGATT---A--------------------------------TTTTAGTAACACCTATGCCTTTCCAGATTTCAGTACATTTTG-GCAGCGGCCACTTCGATCGCCACCAAGAACAATG
droSec2 scaffold_1:3635315-3635549 + AAAATCGAGATCGGTTCGGCCAACGG---AGCTACCCATGCCGAGGATCACAAGTGAGTATTATA-------A-----------------------------------------------------------ATA-----------------------------------------------TTTAA---------------TAATTTTCTAAAAACCTATAGCTGCAA-AAAAACT--ATATCAGATTGAATTGAAGTACAGTTCGGCTTATCT----------CAA---------ACTAA---------------------------------------------------------------------------------------GGATAGATT---A--------------------------------CTTTAGTAACGCCCATGCCTTTCCAGATTTCAGTACATTTTG-GCAGCGGCCACTTCGATCGCCACCAAGAACAATG
dm3 chr2R:6019616-6019859 + AAAATCGAGATCGGTTCGGCCAACGG---AGCTACCCATGCCGAGGATCACAAGTGAGTATTATA-------C-----------------------------------------------------------AGA-----------------------------------------------TTTAA---------------TAATTTGCCAAAAACCTACAGTTGCAA-TGAAATT--ATATCAGATTGAATTGAAGTACAGTTTGGCTTATCT----------CAAAAGAGATAAAATAA---------------------------------------------------------------------------------------GGATAGATT---A--------------------------------TTTTAGTAACACCCATGCCTTTCCAGATTTCAGTACATTTTG-GCAGCGGCCACTTCGATCGCCACCAAGAACAATG
droEre2 scaffold_4929:8351514-8351795 - AAAATCGAGATCGGTTCCGCCAACGG---AGCTACCCATGCGGACGACCACAAGTAAGTGTTATA-------A---AGTG-----------------------------------------------------------------TTTAATATAGTT-TATACAGCAGTGCTTCTAATCTCTTTTAA---------------TGATTTTCTACAAACCAATAGTTCTAAAACAAATT--CGATTAGATTGAAATGAAGTACAGTTTTGCCAATCT----------CAAAAGTTATGAACCAA---------------------------------------------------------------------------------------CTATTAATC---A--------------------------------TTATAATAACACTCTTGCCTTTTCAGATTTCAGTACATTTTA-GCAGCAGCCACGTCGATTGCCACCAAGAACAATG
droYak3 2L:18652368-18652612 + AAAATCGAGATCGGTTCGGCCAACGG---AGCTCCCCATGCTGATGATCACAAGTAAGGATTATT-------A---T-------------------------------------------------------GTA----------TTTAGTATAGTT-TATACTGCATTGCGTGTAATCT------------------------TTTTTCTACAAACCAATAGTTTTAAATGAATTT--AGATTATATGAAAATGAAGTACAGTTTTGACAATCT----------------------------------------------------------------------------------------------------------------------------------------------------------------TATAATAACATCCTTGCCTTTCCAGATTTCAGTACATTTTA-GCAGCAGCCACTTCGATTGCAACCAAGAACAATG
droEug1 scf7180000409209:160823-160986 - AAGATCGAGATTGTTTCGCCCAATGG---AGCTGCCCATGGCGAGGATCATAAGTAAGTATCTTA-------A-----------------------------------------------------------AGA-----------------------------------------------TACTT---------------AAATATCTTAAAAATCTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTAAAACCCCATCTCTTACAGATTTCAGTACATTTTG-GCTGCCGCCACTTCTATTGCCACCAAGAACAACG
droBia1 scf7180000301754:312852-313035 - AAGATCGAACTCGTCTCGGCTAATGG---AGCTACCCATGCCGAGGATCACAAGTAAGTATTATA-------A---AGTA-CT-C-TCC-------------------------------------------TTTT-------------------------GTTAGATC------------------------------------------------------------------------------------------------------------------------------------A---------------------------------------------------------------------------------------GGATAGATT---A-------------------CTAGACTAACAGATAATAATCC-CTCCCTGCTCTTTCAGGTTTCAGTACATTTTG-GCAGCGGCCACTTCGATTGCCACCAAGAACAACG
droTak1 scf7180000415363:211260-211566 - AAAATCGAGATCGTTTCGGCCAATGG---AGCCACCCATTCCGAAGATCACAAGTAAGTATTGGA-------T-------TTTACTACTTAATCAATCGATAAATAAATTTTTTAAAGCTATAAAATCTGCCAGA--------------------------------CTT---GTA----------A-GCCGAAAACTCTGA--------------------ATAAGA--AGAAACTAAATATTAAATCCAACTGAAAGAGATTTCTGCGG----------CACC------------------------------------TAG-------------------------------------------------AATAGATACAATATTAGGATAGATT---A-------------------ATAGG-TACCAGATTATAATCACTGCCTTGCTCTTTCAGATTTCAGTACATTTTG-GCAGCGGCCACTTCGATTGCCACCAAGAACAACG
droEle1 scf7180000491258:215830-215921 + AATTTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTAAAAG---A--------------------------------TTATAATCACTTCCTTGCCATTTCAGATTTCAGTACATTTTG-GCAGCGGCCACTTCGATTGCCACCAAGAACAACG
droRho1 scf7180000774573:38039-38345 - AAGATCGAGATCGTTTCGGCCAATGG---AGCTACCCATTCCGAAGATCACAAGTGAGTATAACT-------G-----------------------------------------------------------GGGTCACATAATATATAGTTTAGTTATA--------------------------------------------------------------------------------------------------------------GATCT----------CAC-----------ACGAGAAAGTTCCTTCAAAAGCTGTTTACAAAATCCATAAATATGGTAGAAAACAAAAGAAAGAGATTAAATAAAATCGAAAC--TAAAAGGATAGTTTTTTAATAGGGACTTGGACTACGACTAGA-TACCAGATTATAAACACTCCCCTGCTCTTCCAGATTTCAGTACATTTTG-GCGGCGGCCACGTCGATTGCCACCAAGAACAACG
droFic1 scf7180000454066:1712305-1712416 - AAGATCGAGATCGTTTCGGCCAATGG---AGCCACCCATGCCGAGGATCACAAGTGAGTATAATG-------T-----------------------------------------------------------GTT-----------------------------------------------TTTAAG--------------TAGCTCTTTAGCATGCTTCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAAATATAAAGTAGATCA
droKik1 scf7180000302817:346486-346654 + AAGATTGAGCTTGTTTCGGCCAATGG---AGCTACCCACTCCGAGGATCATAAGTAAGTATCAAA-------G---AAAGTCT-----------------------------------------------------------------A---------------GGTTTT------------------------------------------------------------------------------------------GT----------TCTCTGAAGCTCA------------------------------------TAG--------------------------------------------------------------------T---------------------------------------GATTAT-----ACTTTCTGCCCTTCCAGATTTCAGTATATCTTG-GCTGCGGCCACTTCGATTGCCACCAAGAACAACG
droAna3 scaffold_13266:4492919-4493079 + AAGATAGAGATTGTGTCGGCCAACGG---AGCCACCAATGCCGAGGACCACAAGTGAGCACAACATTCCAAAGACTAAAGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATCTCTTAACCTCT--------------------------------------------------------------------------------------------------------------------------------------------------------T-----AA-TCGCTCTAATCCAGGTTCCAATACATCCTG-GCCGCGGCCACTTCAATTGCCACCAAGAACAACG
droBip1 scf7180000395751:296132-296293 + AAGATAGAGATTGTTTCGGCCAATGG---AGCCGCCAATGCCGAGGACCACAAGTGAGTCACAGT--CTTAGAACCAAAGT-------------------------------------------------------------------------------------------------------TGG-----------------GTA-----------------------------------------------------------------TCTTTTAAGTTTG--------------------------------------------------------------------------------------------------------------------------------------------------------T-----A-ACCTTTCCAATCCAGGTTCCAATACATCCTC-GCTGCGGCCACTTCAATCGCCACCAAGAACAACG
dp5 3:6869036-6869193 + AAAATAGAGATTGTGTCCGCCAACGG---AGCGACACACGCCGAGGATCACAAGTAAGTAGCCGG-------C-----------------------------------------------------------GGAT-------------------------GGAGGAGCT---------------GG-TCCGATTACTCTGAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA--TTCTCCCATTAAGGTTTCAGTACATTTTG-GCTGCCGCCACCTCGATTGCCACCAAGAACAATG
droPer2 scaffold_2:7070361-7070518 + AAAATAGAGATTGTGTCCGCCAACGG---AGCGACACACGCCGAGGATCACAAGTAAGTAGCAGG-------C-----------------------------------------------------------GGAT-------------------------GGAGGAGCT---------------GG-TCCGATTACTCTGAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA--TTCTCCCATTAAGGTTTCAGTACATTTTG-GCTGCCGCCACCTCGATTGCAACCAAGAACAATG
droWil2 scf2_1100000004382:72991-73155 - AAGATAGAACT------AAGCAATGGCTCATCATCCCACGGCGAGGATCACAAGTAAGACT-AAA-------C---AAATTTT---------------------------------------------------------------------------------GCAAC-------------------------------------TT--------------------------------------------------------TTTGTGG----------TACT------------------------------------TA------------------------------------------------------------------AACAAATTG---C--------------------------------TTTT-----TC--TTTTCTTCAAAAGATTTCAGTACATTTTA-GCTGCTGCCACTTCGATAGCCACCAAAAATAATG
droVir3 scaffold_12875:15858929-15859053 + AATATT------ATTTCCTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAAATACAATACATTTAGTCTTAAC-----------------------ACTCG---------------------------------------------------------------------------------------GGAAACTTT---C--------------------------------TTTT-----GA--TTTCTATTTGCAGATTTCAGTACATTTTG-GCAGCGGCCACCTCCATTGCGACGAAGAACAATG
droMoj3 scaffold_6496:7927369-7927440 - AAA-------TTATTTCGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTTGCAGATTTCAGTACATTTTG-GCCGCGGCCACCTCAATTGCAACGAAGAACAATG
droGri2 scaffold_15245:12663639-12663765 + AAAACCATTGCTGCATCTGGCAACGA---GGCT---TATGCCCAGGCGCGTAAGTAAAGCATA---------A-----------------------------------------------------------ACA-----------------------------------------------TTTAG---------------TTACAT--T--------------------------------------------------------------------------------------ACA---------------------------------------------------------------------------------------------------------------------------------------TTCCATATAATTGCATCAATTTATGATTGCAGCACGCTCTGAGCTGCCGCA-------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AAAATCGAGATCGGTTCGGCCAACGG---AGCTACCCATGCGGAGGATCACAAGTGAGCATTATA-------A-----------------------------------------------------------ATA-----------------------------------------------TTTAA---------------TAATTTTCTAAAAACCTATAGTTGCAA-TAAAACT--ATATCAGATTGAATTGAAGTACAGTTTGGCTTATCT----------CAA---------ACTAA---------------------------------------------------------------------------------------GGATAGATT---A--------------------------------TTTTAGTAACACCTATGCCTTTCCAGATTTCAGTACATTTTG-GCAGCGGCCACTTCGATCGCCACCAAGAACAATGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...ATCGAGATCGGTTCGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.00402200000000000000
AAAATCGAGATCGGTTCGGCCAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00201100000000000000
...ATCGAGATCGGTTCGGCCAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200200000000000000
..AATCGAGATCGGTTCGGCCAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00202000000000000000
AAAATCGAGATCGGTTCGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00220000000000000000
......GAGATCGGTTCGGCCAACGG---AGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
...ATCGAGATCGGTTCGGCCAACGG---AGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
AAAATCGAGATCGGTTCGGCCAACGG---A.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
..AATCGAGATCGGTTCGGCCAACGG---A.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTCGATCGCCACCAAGAACAAT.2411.00101000000000000000
.AAATCGAGATCGGTTCGGCCAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
.....CGAGATCGGTTCGGCCAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTG-GCAGCGGCCACTTCGATCGCC.............2711.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACATTTTG-GCAGCGGCCACTT.....................2311.00100010000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTTTG-GCAGCGGCCACTTCGAT.................2511.00100010000000000000
..................GCCAACGG---AGCTACCCATGCGGAGGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
droSec2
AAAATCGAGATCGGTTCGGCCAACGG---AGCTACCCATGCCGAGGATCACAAGTGAGTATTATA-------A-----------------------------------------------------------ATA-----------------------------------------------TTTAA---------------TAATTTTCTAAAAACCTATAGCTGCAA-AAAAACT--ATATCAGATTGAATTGAAGTACAGTTCGGCTTATCT----------CAA---------ACTAA---------------------------------------------------------------------------------------GGATAGATT---A--------------------------------CTTTAGTAACGCCCATGCCTTTCCAGATTTCAGTACATTTTG-GCAGCGGCCACTTCGATCGCCACCAAGAACAATGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCACTTCGATCGCCACCAAGAACAAT.2811.0010010
.....CGAGATCGGTTCGGCCAACGG---AGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
.........ATCGGTTCGGCCAACGG---AGCTACC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
..AATCGAGATCGGTTCGGCCAACGG---..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACATTTTG-GCAGCGGCCACTTCGA..................2611.0010010
..............................GCTACCCATGCCGAGGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACTTCGATCGCCACCAAGAAC....2311.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTTCGATCGCCACCAAGAACA...2311.0010100
dm3
AAAATCGAGATCGGTTCGGCCAACGG---AGCTACCCATGCCGAGGATCACAAGTGAGTATTATA-------C-----------------------------------------------------------AGA-----------------------------------------------TTTAA---------------TAATTTGCCAAAAACCTACAGTTGCAA-TGAAATT--ATATCAGATTGAATTGAAGTACAGTTTGGCTTATCT----------CAAAAGAGATAAAATAA---------------------------------------------------------------------------------------GGATAGATT---A--------------------------------TTTTAGTAACACCCATGCCTTTCCAGATTTCAGTACATTTTG-GCAGCGGCCACTTCGATCGCCACCAAGAACAATGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTACATTTTG-GCAGCGGCCACT......................2517.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000001210000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGTACATTTTG-GCAGCGGCCACT......................2617.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCACTTCGATCGCCACC..........1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AATCGAGATCGGTTCGGCCAACGG---A.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGTACATTTTG-GCAGCGGCCACT......................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000010000000000100000000000000100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTG-GCAGCGGCCACTTCGATCGC..............2513.0030000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTCGATCGCCACCAAGAACA...2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTG-GCAGCGGCCACTTCGATCGC..............2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TCGAGATCGGTTCGGCCAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...ATCGAGATCGGTTCGGCCAACGG---A.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTG-GCAGCGGCCACTTCGATCGCC.............2611.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TCGGCCAACGG---AGCTACCCATGCCGAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTG-GCAGCGGCCACTTCGATCG...............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CGGTTCGGCCAACGG---AGCTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTACATTTTG-GCAGCGGCCAC.......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTTTG-GCAGCGGCCACTTCGT..................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.........................................................................................................................................................................................................................................................................................................AATAA---------------------------------------------------------------------------------------GGATAGATT---A--------------------------------TC...........................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGTAACACCCATGCCTTTCCAGAA.................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...ATCGAGATCGGTTCGGCCAACGG---AGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TTCGGCCAACGG---AGCTACCCATGCCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...ATCGAGATCGGTTCGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................CCATGCCGAGGATCACAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTTTG-GCAGCGGCCACTTCGAT.................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AATCGAGATCGGTTCGGCCAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCACTTCGATCGCCACCAAGAACAATG2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AACGG---AGCTACCCATGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCACTTCGATCGCCACC..........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTACATTTTG-GCAGCGGCCACTTCTC..................2911.0010000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GATCGGTTCGGCCAACGG---AGCTACCCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTTTG-GCAGCGGCCACTTCG...................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TCGGCCAACGG---AGCTACCCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTG-GCAGCGGCCACTTCGATCGC..............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................T---A--------------------------------TTTTAGTAACACCCATGCCTT........................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTACATTTTG-GCAGCGGC..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTCGATCGCCACCAAGAAC....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TCGGTTCGGCCAACGG---AGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CGGTTCGGCCAACGG---AGCTACC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTG-GCAGCGGCCACTTCGATCGCCAC...........2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CGGCCAACGG---AGCTACCCAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCAGTACATTTTG-GCAAG.............................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................AAAGAGATAAAATAA---------------------------------------------------------------------------------------GGAA......................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................AAAGAGATAAAATAA---------------------------------------------------------------------------------------GG........................................................................................................................1730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................AATAA---------------------------------------------------------------------------------------GGATAGATT---C--------------------------------.............................................................................15160.1320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AAAATCGAGATCGGTTCCGCCAACGG---AGCTACCCATGCGGACGACCACAAGTAAGTGTTATA-------A---AGTG-----------------------------------------------------------------TTTAATATAGTT-TATACAGCAGTGCTTCTAATCTCTTTTAA---------------TGATTTTCTACAAACCAATAGTTCTAAAACAAATT--CGATTAGATTGAAATGAAGTACAGTTTTGCCAATCT----------CAAAAGTTATGAACCAA---------------------------------------------------------------------------------------CTATTAATC---A--------------------------------TTATAATAACACTCTTGCCTTTTCAGATTTCAGTACATTTTA-GCAGCAGCCACGTCGATTGCCACCAAGAACAATGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACATTTTA-GCAGCAGCCACGT.....................2312.0020000200
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCACGTCGATTGCCACC..........1912.0020101000
...ATCGAGATCGGTTCCGCCAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCCACGTCGATTGCCACCA.........2211.0010000100
...ATCGAGATCGGTTCCGCCAACGG---AGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTA-GCAGCAGCCACGTC....................2011.0010000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGTCGATTGCCACCAAG.......1911.0010001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTTA-GCAGCAGCCACGTCGATT................2511.0010100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACATTTTA-GCAGCAGCCACGTCGA..................2611.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-GCAGCAGCCACGTCGATT................2011.0010000010
.................CGCCAACGG---AGCTACCCATGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACATTTTA-GCAGCAGCCACGTCGAT.................2711.0010000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGCCACCAAGAACAATG2011.0010001000
................CCGCCAACGG---AGCTACCCATGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTA-GCAGCAGCCACGTCGATTT...............2211.0010001000
.....................................................................................................................................................ATATAGTT-TATACAGCAGTGCTTCTAAT.............................................................................................................................................................................................................................................................................................................................................2811.0011000000
...ATCGAGATCGGTTCCGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
....................CAACGG---AGCTACCCATGCGGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
droYak3
AAAATCGAGATCGGTTCGGCCAACGG---AGCTCCCCATGCTGATGATCACAAGTAAGGATTATT-------A---T-------------------------------------------------------GTA----------TTTAGTATAGTT-TATACTGCATTGCGTGTAATCT------------------------TTTTTCTACAAACCAATAGTTTTAAATGAATTT--AGATTATATGAAAATGAAGTACAGTTTTGACAATCT----------------------------------------------------------------------------------------------------------------------------------------------------------------TATAATAACATCCTTGCCTTTCCAGATTTCAGTACATTTTA-GCAGCAGCCACTTCGATTGCAACCAAGAACAATGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........TCGGTTCGGCCAACGG---AGCTCCCCATGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28121.0021000000000021
.AAATCGAGATCGGTTCGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACATTTTA-GCAGCAGCCACTTCGATT................2811.00101000000000
....................CAACGG---AGCTCCCCATGCTGATGATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTA-GCAGCAGCCACTTCGAT.................2111.00100000010000
..AATCGAGATCGGTTCGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
..........TCGGTTCGGCCAACGG---AGCTCCCCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
....................CAACGG---AGCTCCCCATGCTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
......................ACGG---AGCTCCCCATGCTGATGATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.........ATCGGTTCGGCCAACGG---AG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
..............................................................................................................................................................................................................................................................GAAGTACAGTTTTGACAAT..............................................................................................................................................................................................................................................1911.00100010000000
AAAATCGAGATCGGTTCGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
droEug1
AAGATCGAGATTGTTTCGCCCAATGG---AGCTGCCCATGGCGAGGATCATAAGTAAGTATCTTA-------A-----------------------------------------------------------AGA-----------------------------------------------TACTT---------------AAATATCTTAAAAATCTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTAAAACCCCATCTCTTACAGATTTCAGTACATTTTG-GCTGCCGCCACTTCTATTGCCACCAAGAACAACGSizeHit CountTotal NormTotal
No Reads
droBia1
AAGATCGAACTCGTCTCGGCTAATGG---AGCTACCCATGCCGAGGATCACAAGTAAGTATTATA-------A---AGTA-CT-C-TCC-------------------------------------------TTTT-------------------------GTTAGATC------------------------------------------------------------------------------------------------------------------------------------A---------------------------------------------------------------------------------------GGATAGATT---A-------------------CTAGACTAACAGATAATAATCC-CTCCCTGCTCTTTCAGGTTTCAGTACATTTTG-GCAGCGGCCACTTCGATTGCCACCAAGAACAACGSizeHit CountTotal NormTotal
No Reads
droTak1
AAAATCGAGATCGTTTCGGCCAATGG---AGCCACCCATTCCGAAGATCACAAGTAAGTATTGGA-------T-------TTTACTACTTAATCAATCGATAAATAAATTTTTTAAAGCTATAAAATCTGCCAGA--------------------------------CTT---GTA----------A-GCCGAAAACTCTGA--------------------ATAAGA--AGAAACTAAATATTAAATCCAACTGAAAGAGATTTCTGCGG----------CACC------------------------------------TAG-------------------------------------------------AATAGATACAATATTAGGATAGATT---A-------------------ATAGG-TACCAGATTATAATCACTGCCTTGCTCTTTCAGATTTCAGTACATTTTG-GCAGCGGCCACTTCGATTGCCACCAAGAACAACGSizeHit CountTotal NormTotal
No Reads
droEle1
AATTTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTAAAAG---A--------------------------------TTATAATCACTTCCTTGCCATTTCAGATTTCAGTACATTTTG-GCAGCGGCCACTTCGATTGCCACCAAGAACAACGSizeHit CountTotal NormTotal
No Reads
droRho1
AAGATCGAGATCGTTTCGGCCAATGG---AGCTACCCATTCCGAAGATCACAAGTGAGTATAACT-------G-----------------------------------------------------------GGGTCACATAATATATAGTTTAGTTATA--------------------------------------------------------------------------------------------------------------GATCT----------CAC-----------ACGAGAAAGTTCCTTCAAAAGCTGTTTACAAAATCCATAAATATGGTAGAAAACAAAAGAAAGAGATTAAATAAAATCGAAAC--TAAAAGGATAGTTTTTTAATAGGGACTTGGACTACGACTAGA-TACCAGATTATAAACACTCCCCTGCTCTTCCAGATTTCAGTACATTTTG-GCGGCGGCCACGTCGATTGCCACCAAGAACAACGSizeHit CountTotal NormTotal
No Reads
droFic1
AAGATCGAGATCGTTTCGGCCAATGG---AGCCACCCATGCCGAGGATCACAAGTGAGTATAATG-------T-----------------------------------------------------------GTT-----------------------------------------------TTTAAG--------------TAGCTCTTTAGCATGCTTCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAAATATAAAGTAGATCASizeHit CountTotal NormTotal
No Reads
droKik1
AAGATTGAGCTTGTTTCGGCCAATGG---AGCTACCCACTCCGAGGATCATAAGTAAGTATCAAA-------G---AAAGTCT-----------------------------------------------------------------A---------------GGTTTT------------------------------------------------------------------------------------------GT----------TCTCTGAAGCTCA------------------------------------TAG--------------------------------------------------------------------T---------------------------------------GATTAT-----ACTTTCTGCCCTTCCAGATTTCAGTATATCTTG-GCTGCGGCCACTTCGATTGCCACCAAGAACAACGSizeHit CountTotal NormTotal
No Reads
droAna3
AAGATAGAGATTGTGTCGGCCAACGG---AGCCACCAATGCCGAGGACCACAAGTGAGCACAACATTCCAAAGACTAAAGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATCTCTTAACCTCT--------------------------------------------------------------------------------------------------------------------------------------------------------T-----AA-TCGCTCTAATCCAGGTTCCAATACATCCTG-GCCGCGGCCACTTCAATTGCCACCAAGAACAACGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........GATTGTGTCGGCCAACGG---AGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
.....................AACGG---AGCCACCAATGCCGAGGACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
................................CACCAATGCCGAGGACCACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
........GATTGTGTCGGCCAACGG---AG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCAATACATCCTG-GCCGCGGCCACT......................2711.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAATACATCCTG-GCCGCGGC..........................2211.001100000
....................CAACGG---AGCCACCAATGCCGAGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
........GATTGTGTCGGCCAACGG---AGCCAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCTG-GCCGCGGCCACTTCAAT.................2411.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAATACATCCTG-GCCGCGGC..........................2111.001010000
..GATAGAGATTGTGTCGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000
..GATAGAGATTGTGTCGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
....TAGAGATTGTGTCGGCCAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
........GATTGTGTCGGCCAACGG---AGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
droBip1
AAGATAGAGATTGTTTCGGCCAATGG---AGCCGCCAATGCCGAGGACCACAAGTGAGTCACAGT--CTTAGAACCAAAGT-------------------------------------------------------------------------------------------------------TGG-----------------GTA-----------------------------------------------------------------TCTTTTAAGTTTG--------------------------------------------------------------------------------------------------------------------------------------------------------T-----A-ACCTTTCCAATCCAGGTTCCAATACATCCTC-GCTGCGGCCACTTCAATCGCCACCAAGAACAACGSizeHit CountTotal NormTotal
No Reads
dp5
AAAATAGAGATTGTGTCCGCCAACGG---AGCGACACACGCCGAGGATCACAAGTAAGTAGCCGG-------C-----------------------------------------------------------GGAT-------------------------GGAGGAGCT---------------GG-TCCGATTACTCTGAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA--TTCTCCCATTAAGGTTTCAGTACATTTTG-GCTGCCGCCACCTCGATTGCCACCAAGAACAATGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACATTTTG-GCTGCCGCCACCTC....................2411.0010100000000
...ATAGAGATTGTGTCCGCCAACGG---AGCGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010010000000
.....AGAGATTGTGTCCGCCAACGG---AGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010000000
....................CAACGG---AGCGACACACGCCGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACATTTTG-GCTGCCGCCACCTCGAT.................2711.0010010000000
..AATAGAGATTGTGTCCGCCAACGG---AGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000001
....................CAACGG---AGCGACACACGCCGAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010000000
droPer2
AAAATAGAGATTGTGTCCGCCAACGG---AGCGACACACGCCGAGGATCACAAGTAAGTAGCAGG-------C-----------------------------------------------------------GGAT-------------------------GGAGGAGCT---------------GG-TCCGATTACTCTGAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA--TTCTCCCATTAAGGTTTCAGTACATTTTG-GCTGCCGCCACCTCGATTGCAACCAAGAACAATGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCCGCCACCTCGATTGC..............2011.001010000
....TAGAGATTGTGTCCGCCAACGG---A.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
droWil2
AAGATAGAACT------AAGCAATGGCTCATCATCCCACGGCGAGGATCACAAGTAAGACT-AAA-------C---AAATTTT---------------------------------------------------------------------------------GCAAC-------------------------------------TT--------------------------------------------------------TTTGTGG----------TACT------------------------------------TA------------------------------------------------------------------AACAAATTG---C--------------------------------TTTT-----TC--TTTTCTTCAAAAGATTTCAGTACATTTTA-GCTGCTGCCACTTCGATAGCCACCAAAAATAATGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
AAGATAGAACT------AAGCAATGGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.....AGAACT------AAGCAATGGCTCAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.......................TGGCTCATCATCCCACGGCGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
.AGATAGAACT------AAGCAATGGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTA-GCTGCTGCCACTTCGATAGC..............2411.00100010
.....................AATGGCTCATCATCCCACGGCGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
............................CATCATCCCACGGCGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCACTTCGATAGCCACC..........2011.00100010
AAGATAGAACT------AAGCAATGGCTCAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
droVir3
AATATT------ATTTCCTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAAATACAATACATTTAGTCTTAAC-----------------------ACTCG---------------------------------------------------------------------------------------GGAAACTTT---C--------------------------------TTTT-----GA--TTTCTATTTGCAGATTTCAGTACATTTTG-GCAGCGGCCACCTCCATTGCGACGAAGAACAATGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTCCATTGCGACGAAGAACAAT.2411.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACATTTTG-GCAGCGGCCAC.......................2111.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
AAA-------TTATTTCGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTTGCAGATTTCAGTACATTTTG-GCCGCGGCCACCTCAATTGCAACGAAGAACAATGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AAAACCATTGCTGCATCTGGCAACGA---GGCT---TATGCCCAGGCGCGTAAGTAAAGCATA---------A-----------------------------------------------------------ACA-----------------------------------------------TTTAG---------------TTACAT--T--------------------------------------------------------------------------------------ACA---------------------------------------------------------------------------------------------------------------------------------------TTCCATATAATTGCATCAATTTATGATTGCAGCACGCTCTGAGCTGCCGCA-------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/21/2015 at 03:52 PM