ID:

dsi_21255

 Coordinate:

3r:5185713-5185886 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

AGCGGCATCAGTGGCTTCAATGAGCCAGGACAAGATGCTGGCAAAAAACGGTAAGTTGATTGAGGCCATTAGTGACAAGAGTTAGAATTTAGATTTATTGGTTCATTACTCACTCACACGATAGCATAACAAAGTCCATTTAATTCAAAATCGTTCTATTTATTTAAATGTAGAAAAGATAATTATTGTGTCCTTTTAATAACCTTTGCTTCCAATATTTGTAGGCTACAATACGCCCTGGTTCAAGCTGTTGCCGCATATGACGCCTATGAGC
**************************************************.(((((.....(((((.....((((...((((..(((((..........)))))...))))..)))).............((((..(((.(((((....(((.((((((..........))))))..))))))))..)))..))))...........)))))....)))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 M053
female body
 M023
head
 M025
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
......................AGCCAGGACAAGATGCTG.......................................................................................................................................................................................................................................... 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0
......ATCAGTGGCTTCAATGAGCC........................................................................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0
..........................AGGACAAGATGCTGGCAAAAAACGGC.............................................................................................................................................................................................................................. 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................................AATGCGCCCTGGTTCAAGCT......................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0
......ATCAGTGGCTTCAATGAG.......................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................ACGCCCTGGTTCAAGCTGTTGCCGCA................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................CGCCCTGGTTCAAGCT......................... 16 0 1 1.00 1 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................TTGTAGGCTGCAACTCGCCC.................................... 20 3 9 0.67 6 4 0 0 0 2 0 0 0 0
..............................................................................................................................................................TTTATTTACATGTAGAAACC................................................................................................ 20 3 20 0.15 3 0 0 0 0 0 3 0 0 0
..............................................................................................................................TAACAAAGTCCCTTTAAAACA............................................................................................................................... 21 3 7 0.14 1 0 0 0 0 0 0 1 0 0
................................................................................................ATTGGCTCATTACTGACGC............................................................................................................................................................... 19 3 15 0.07 1 0 0 0 0 0 0 0 1 0
.......................................................................................................................................CCAGTTAATTCAAAA............................................................................................................................ 15 1 20 0.05 1 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

TCGCCGTAGTCACCGAAGTTACTCGGTCCTGTTCTACGACCGTTTTTTGCCATTCAACTAACTCCGGTAATCACTGTTCTCAATCTTAAATCTAAATAACCAAGTAATGAGTGAGTGTGCTATCGTATTGTTTCAGGTAAATTAAGTTTTAGCAAGATAAATAAATTTACATCTTTTCTATTAATAACACAGGAAAATTATTGGAAACGAAGGTTATAAACATCCGATGTTATGCGGGACCAAGTTCGACAACGGCGTATACTGCGGATACTCG
**************************************************.(((((.....(((((.....((((...((((..(((((..........)))))...))))..)))).............((((..(((.(((((....(((.((((((..........))))))..))))))))..)))..))))...........)))))....)))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 GSM343915
embryo
 M024
male body		 M025
embryo
....CGTAGTTACTGAAGTTAC............................................................................................................................................................................................................................................................ 18 2 7 0.43 3 2 0 1 0
................................................................................................................................................................................................GAAAATTGTTGGAGTCGAAGG............................................................. 21 3 4 0.25 1 0 1 0 0
......................................................................................................................................................................................AATATCACAGGAATATTA.......................................................................... 18 2 12 0.17 2 0 0 0 2
.....................................................................CTCACTGGTCACAATCTTA.......................................................................................................................................................................................... 19 3 12 0.17 2 2 0 0 0
........................................................................................................................................................................................................................TAAACGTCGGATGTTAGGC....................................... 19 3 20 0.05 1 0 0 1 0
........................................................................................................................................................................................................................TCAACGTCCGATGTTAGGC....................................... 19 3 20 0.05 1 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:5185663-5185936 - dsi_21255 AGCGGCATC-AGTGGCTT------CAAT---------------------------------------------------------------GAGCCAG---GACAAGATGCTGGCAAAAAACGGTAAGTT-----GAT---------------TG-------AG----------GCCATTA---GTG----------ACAAGAG-----------------------------------------------------------------------------------------------------------------------TTAGAATTTAGATTTATTGGTTCATTACTCACTCAC--------ACGATAGCATAACAAAGTCC-----------------------AT---T---------T------AA-----------------------------TTCAAAATCGTTCTA-TTTATTTAAATGTAGAAAA---------------GATAATTATTGTGTCCTTT--TAA-TAAC--CTT-TG-------------------------------------------------------------------CTTCCAATA-TTTGTAGGCTACAATACGC---------CCTGGTTCAAGCTGTTGCCGCATATGACGCCTATGAGC-------------
droSec2 scaffold_27:618787-619060 - AGCGGCATC-AGTGGCTT------CAAT---------------------------------------------------------------GAGCCAG---GACAAGATGCTGGCAAAAAACGGTAAGTC-----GAT---------------TT-------AT----------GCCATTA---GTG----------ACAAGAG-----------------------------------------------------------------------------------------------------------------------TTAGAATTTAGATTTATTGGTTCATTACTCACTCAC--------ACGATAGCATAACAAAGTCC-----------------------AT---T---------T------AA-----------------------------TTCAAAAGGGTTCTA-TTTATTTGAATGTAGAAAA---------------GATAATTATTGTGTCCATT--TAA-TAAC--CTT-TG-------------------------------------------------------------------CCTCCAATA-TTTGTAGGCTACAATACGC---------CCTGGTTCAAGCTGTTGCCGCATATGACGCCTATGAGC-------------
dm3 chr3R:16120066-16120325 + AGCGGCATC-AGTGGCTT------CAAT---------------------------------------------------------------GAGCCAG---GACAAGATGCTGGCAAAAAACGGTAAGTT-----GAT---------------TT-------AT----------ACCATTA---GTGA---------ACAAGAA-----------------------------------------------------------------------------------------------------------------------TTAGAAATTGGATTTATTGGTCCATTACTC----AC--------ACGATGGCATAACAAAGTCC-----------------------AA------------------------------------------------------------GTCA-ATTATATTTGAATGTACAAAA---------------GATAATTGTTGTGGCCTTTCGTAA-TAAC--CTT-TA-------------------------------------------------------------------CCTCCAACA-TTTGTAGGCTACAATGCGC---------CCTGGTTCAAGCTGTTGCCGCATATGACGCCAATGAGC-------------
droEre2 scaffold_4770:5561469-5561733 - der_555 AGCGGCGTC-TGTGGCTT------CAAT---------------------------------------------------------------GGGACAG---GACAAGATGCTGACAAAAAACGGTAAGTT-----GCT---------------CTAAGAAGTAT----------GCCATCATTGGTGG------------ATGG-----------------------------------------------------------------------------------------------------------------------ATGGATC--------ATGGATCCATTCCCT----ACACATTGGCATGATGTTATA-----------------AATGTATAAATTA------------------------------------------------------------------TTAA-TTCGCTTGATTAAAGAACA---------------TAAACTCATTGTATCCTAT--AAA-ATAC--CAT-TA-------------------------------------------------------------------CCTCCAATA-TTTGTAGGCTACAATGCGC---------ACTGGTACAAGATATTACCGCACATGACGCCTATGAGC-------------
droYak3 3R:4895150-4895409 + AGCGGCATC-AATAGCTT------CAAT---------------------------------------------------------------GGGGCAG---GACAAGATGCTACCAAAAAACGGTAAGTT-----GTT---------------CTACAAATAAT----------ATCATTATAGGTG----------TTAAAAA-----------------------------------------------------------------------------------------------------------------------TTTGAAATAACATTTATGGATACATTCCTC----AC--------ACACTTGCATA-------------------------------------------------------------------------------------------AATGTTTAA-TTTGCTTCATTATAGAAAA---------------GATACTCATTGTGTACATT--TAAATAAC--AAT-AA-------------------------------------------------------------------TCTCCCATA-TTTGTAGGCTACAATGCGC---------CCTGGTACAAGATTTTACCGCATATGACGCCTATGAGC-------------
droEug1 scf7180000409804:2438198-2438475 + ATCAGCAAC-AGTGGCGT------CCTT---------------------------------------------------------------GGGCCAG---GAAAAGATGTTGCAAAAAAATGGTAAGTT-----AAG---------------CG-------AAGTAAAACTTT-------------------CTGA-----------TCATT-----------------------TAGATCGGTCATA----TTAAGATATAGC--------------------------------------------------------------------------------------GTATACTT----------------------------G--------------------------------------------------------------CAGCAACATAA------------------------------------ATTTATATGTTAAACTA--A----------------------------------AGCACAACATTAGTGGTACCACTATATTGTCCAGTACTTACTATTAATCCCATTCATTACACTCTTCTTCCTCTA-TTTACAGGCTACAATGCGC---------CCTGGTTCAAGTTGCTGCCGCATATGACACCGATGAGC-------------
droBia1 scf7180000302428:281605-281916 + GGTAGCAGC-AGCAACTC------CTAC---------------------------------------------------------------GGCT-AC---A-------GCTGGCAC--AGCAGTCAGGT-----GAG---------------TG-------AG----------CTT--AA---GTG----------ACGGGATCTAAAAAAT--ATACTTGGAGAAATCTTAGTTTAAATG----------------AAGACAGCAATGTTACATTTATTTAAAATTGTAGAACCTAAATATCATAGAAAACATTTTAAAAATTTTAAAAATCATAT---------------------------------------------------------------------------------------------------------------------------------------------AGAACACATTTAAAAAAGATTCATTAATTGAAATGAAAATTATTA--------------------CATAAA-------------------------------------------------------------------TTTTAAATATTTTTCGATTCAATACCCATTTATTAAACACTTTTAAAACATTTTATATTTCTGCCTGTTCAAAACC-------------
droTak1 scf7180000415809:695259-695477 - ACCACCACCCAGCAGCCA------CAAA---------------------------------------------------------------GACCTTTGGGGGTAAGTTACTGATTAATACAGCTTTGT------------------------TT-------TT----------CCCATCA---CT-----------TCAACAT--------T-------------------------------------------------------TACA------------------------------------------CTTTAGA--TGCTCAACAA-------------------CACGCAC--------GTGATTGTCCAGCAGCAGCC-----------------------GG---T---------T------T---------------------------TAATCCAA--------------------------------------------------------------------------------GC-------------------------------------------------------------------TCCGCAGCA-TCAGGAGCTGATTATGCGC---------CAGGCGGCCATCCAT--CCGTACAACA--ATCGCGTCGTCTATGCGACTTC
droEle1 scf7180000491008:799423-799653 - AGCGGCAAC-AGTGGCGT------CCTT---------------------------------------------------------------GGGTCAG---GATAAGATGCTGCCAAAAAACGGTAAGTT-----AAA---------------TG-------AT----------TCC------------------------------------------------------TAGCCCAAACC----------------AAAATAATTTTACT------------------------------------------------------------------------------------------------------------------------------TCTTAGTTATTTAT---T---------T------AAAAAAAATGATTTA----------------GCTCA--------------------------------------------------------------------G-TTAA--TTT-C-CAATTAAAAATAC--------------------------------CCTTCTTGTT-------CACTTCTTGTTCTT-GTTTTAGGCTACAATGCGC---------CCTGGTACAAACTGCTGCCGCATATGACGCCCATGAGC-------------
droRho1 scf7180000768020:57113-57176 - TTCGCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-TTTTTAGGCTACAATGCGC---------CCTGGTACAAGCTGCTTCCACAAATGACCCCTATGAGC-------------
droFic1 scf7180000453213:13057-13330 + AGCAGCGTC-AGTGGCTT------CCAT---------------------------------------------------------------GGGACAG---GAGAAGATGCTGCCAAAAAACGGTAGGTT-----AAT---------------CA-------GAG-------------------GTGCACAATACAA-----------CAAAATTG-TTTCTTGGAAGTCTTCTTTTCAATCGGCAATTTATCTTCTGAAATTAAGTTTACT------------------------------------------------------------------------------------------------------------------------------TTTGAGTTAATTGATCTTTTAGTTTACT------AAGAAAAATAATAAATGACAGCAACTTAT------------------------------------A------------------------------------------GTTTTAA-AA-------------------------------------------------------------------CCTCCTCTT-CTTTCAGGCTACAATGCTC---------CCTGGTTCAAACTGCTGCCCCACATGACGCCCATGAGC-------------
droKik1 scf7180000302650:39003-39205 + AGCCGCGAC-AGTTGCAC------CCTT---------------------------------------------------------------GGGTCAG---GAGAAGGTGTTGCCAAAAAACGGTAAGCCACGTTTATATTAATAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAAGCTCCGATCTAAAT---T---------TTAGCTCTT-----------------------------AACTGACTTAACTTT-G----------------------------------------------------------------------TATCATATTTCAA------------------------------------------------------CCTCTG--A-TTTTCAGGGTACAATGCGCCTAGCCATCCCTGGTACAAGCTCCTGCCGCAGATGCCGCCCATGACC-------------
droAna3 scaffold_13340:2655121-2655243 + TATTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------------------------------------------TTTAAAAAT-G-----------AATAAA-ATTAGTACTTGGAA----------------------TAA-CTGTTTCAT-AA-------------------------------------------------------------------TCTTCC--C-TTTTTAGGATACAATGCGCCTAGCCATGCCTGGTATAAGCTGCTCCCACAGATGCCACCAATAACA-------------
droBip1 scf7180000396708:5474586-5474706 - TCAATT-TA-TGTAAATG------CTGT---------------------------------------------------------------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTAAAAAAAAATAA---T---------T------GA-----------------------------ATGAATG------------------------------------------------------------------A-TAAC--TTG-C-AAATTAAACATAA-------------------------------------------------------------------ACA---AACAATACGC---------ACGTATCCCAGATGCGACTGTGGATGAAAACT-TGTAT-------------
dp5 2:27566539-27566745 - ACCACC-TC-TGTGGCAGTCACGTCGAT---AGT-----------------GCATGGCCACG------GCCAGGGCCAGGGTCA-------GGGCCAG---GAGAAAGTGTTGCCAAAAAACGGTAGGAT-----TCTATATAGAAGTAGGATCAG--------------------------CAGTGAAGATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC--CAT-AA-------------------------------------------------------------------TCTCTCTTATCCCGCAGGCTACAATGCGCCTAGCCATCCATGGTACAAGATTCTGCCACAAATGCCGCCCATGACC-------------
droPer2 scaffold_6:2886104-2886316 - ACCACC-TC-TGTGGCAGTCACGTCGAT---AGT-----------------GCATGGCCACGGCCACGGCCAGGGCCAGGGTCA-------GGGCCAG---GAGAAAGTGTTGCCAAAAAACGGTAGGAT-----TCTATATAGAAGTAGGATCAG--------------------------CAGTGAAGATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC--CAT-AA-------------------------------------------------------------------TCTCTCTTATCCCGCAGGCTACAATGCGCCTAGCCATCCATGGTACAAGATTCTGCCACAAATGCCGCCCATGACC-------------
droWil2 scf2_1100000004902:10723833-10723998 - GTTC--------------------TGGC---------------------------------------------------------------TGGACAG---GATAAGTTGTTGACAAAAAATGGTAAGAT-----CA-------------------------AG----------GTCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------------------------------------------TCCAAATAT-C-----------AAGAAA-CGAAATAGTTGGCT----------------------TAT-CAAT--TTT-TA-------------------------------------------------------------------TCCCCA-TT-GTCGCAGGTTACAACGA---TAGCTATGCCTGGTATAAACTATTGCCGCAAATGCCGCCCATGACC-------------
droVir3 scaffold_13042:2617900-2618165 - dvi_14419 GGCGGGATC-GGTGTCGG------TGTCGGCGTCGGTCTGCCACAGCCGATGCACGGCG------------GTGGCGGGGGCGGCGGCGTCGGC-TAT---CACC---ATATGGCACATAGAGGTAGATC-----AAA---------------TA-------GAACAACACGAT-------------------CTCA-----------AAAAC---------------------------------------------------C--------------------------------------------------------------------------------------GCATCCAT----------------------------AT---AACCATGCACAGAAATTTAT---T---------T------AA-----------------------------AACAAAATTAATTTC-T----------------------------------------------------------------------TTACACAATATTAGCTGCATCTCACAGGTGAAGTGTTCATGCTGCCATTGCCTA---------------------------------------------------------TCAGAATATTGCCA-ATGCCCCGACCACAAGC-------------
droMoj3 scaffold_6328:978034-978289 + GGCGGCGGC-GGCGGCGT------CGGC---------------------------------------------------------------GGC-TAT---CACCACAATATGGCACACAGAGGTAGATC-----AAA---------------TA-------GAACAACACGAT-------------------CTCA-----------AAAAC---------------------------------------------------C--------------------------------------------------------------------------------------GCATCCAT----------------------------AT---AACCATGCACAGAAATTTAT---T---------T------AA-----------------------------ATCAAAATTAATTTC-T----------------------------------------------------------------------TTACACAATATTAGCTGCATCACACAGGTGAAGTGTTCATGCTGCCATTGCCAATCACTATA-----ATGCCAATG---CCCCGACCACAAGCAGA----------GCGGCTGCAGCTGCAGCAGCGACAGCAG--CAGCAGC-------------
droGri2 scaffold_15203:5439673-5439914 - GTCGGCGTC-GGTC--TGCCA---CA-------------------GCCGATGCACGGCGGCG------GCAGTGGTGGTGGTGGCGGCGGTGGC-TAT---CACCCCAATATGGCCAACAGAGGTAGATC-----AAA---------------TA-------GAACAACACGAT-------------------CTCA-----------AAAAC---------------------------------------------------C--------------------------------------------------------------------------------------GCATCCAT----------------------------ATACTAACAATGTACAGAAATTTAT---T---------T------AA-----------------------------AACAAAATTAATTTC-T----------------------------------------------------------------------TTACACAATATTAGCTGCATCTCACAGGTGAAGT---------------------------------------------------------------------------GTTCATGCTGCCATTGCCTATCACAGTAATG-CC-------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AGCGGCATC-AGTGGCTT------CAAT---------------------------------------------------------------GAGCCAG---GACAAGATGCTGGCAAAAAACGGTAAGTT-----GAT---------------TG-------AG----------GCCATTA---GTG----------ACAAGAG-----------------------------------------------------------------------------------------------------------------------TTAGAATTTAGATTTATTGGTTCATTACTCACTCAC--------ACGATAGCATAACAAAGTCC-----------------------AT---T---------T------AA-----------------------------TTCAAAATCGTTCTA-TTTATTTAAATGTAGAAAA---------------GATAATTATTGTGTCCTTT--TAA-TAAC--CTT-TG-------------------------------------------------------------------CTTCCAATA-TTTGTAGGCTACAATACGC---------CCTGGTTCAAGCTGTTGCCGCATATGACGCCTATGAGC-------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................AGCCAG---GACAAGATGCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00202000000000000000
......ATC-AGTGGCTT------CAAT---------------------------------------------------------------GAGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
................................................................................................AG---GACAAGATGCTGGCAAAAAACGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
......ATC-AGTGGCTT------CAAT---------------------------------------------------------------GAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGC---------CCTGGTTCAAGCTGTTGCCGCA.............................2611.00101000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGC---------CCTGGTTCAAGCT......................................1611.00100000001000000000
droSec2
AGCGGCATC-AGTGGCTT------CAAT---------------------------------------------------------------GAGCCAG---GACAAGATGCTGGCAAAAAACGGTAAGTC-----GAT---------------TT-------AT----------GCCATTA---GTG----------ACAAGAG-----------------------------------------------------------------------------------------------------------------------TTAGAATTTAGATTTATTGGTTCATTACTCACTCAC--------ACGATAGCATAACAAAGTCC-----------------------AT---T---------T------AA-----------------------------TTCAAAAGGGTTCTA-TTTATTTGAATGTAGAAAA---------------GATAATTATTGTGTCCATT--TAA-TAAC--CTT-TG-------------------------------------------------------------------CCTCCAATA-TTTGTAGGCTACAATACGC---------CCTGGTTCAAGCTGTTGCCGCATATGACGCCTATGAGC-------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGC---------CCTGGTTCAAGCTGTTGC.................................2411.0010010
.........................AAT---------------------------------------------------------------GAGCCAG---GACAAGATGCTGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
......ATC-AGTGGCTT------CAAT---------------------------------------------------------------GAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
............................................................................................AGCCAG---GACAAGATGCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
dm3
AGCGGCATC-AGTGGCTT------CAAT---------------------------------------------------------------GAGCCAG---GACAAGATGCTGGCAAAAAACGGTAAGTT-----GAT---------------TT-------AT----------ACCATTA---GTGA---------ACAAGAA-----------------------------------------------------------------------------------------------------------------------TTAGAAATTGGATTTATTGGTCCATTACTC----AC--------ACGATGGCATAACAAAGTCC-----------------------AA------------------------------------------------------------GTCA-ATTATATTTGAATGTACAAAA---------------GATAATTGTTGTGGCCTTTCGTAA-TAAC--CTT-TA-------------------------------------------------------------------CCTCCAACA-TTTGTAGGCTACAATGCGC---------CCTGGTTCAAGCTGTTGCCGCATATGACGCCAATGAGC-------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................CAG---GACAAGATGCTGGCAAAAAACGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAAGCTGTTGCCGCATATGACG......................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------CCTGGTTCAAGCTGTTGCCGCA.............................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................GACAAGATGCTGGCAAAAAACGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................T------CAAT---------------------------------------------------------------GAGCCAG---GACAAGATGCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................T---------------------------------------------------------------GAGCCAG---GACAAGATGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.........................AAT---------------------------------------------------------------GAGCCAG---GACAAGATGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000010000
.....CATC-AGTGGCTT------CAAT---------------------------------------------------------------GAGCCAG---GAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAATGCGC---------CCTGGTTCAAGCTGT....................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------CCTGGTTCAAGCTGTTGCCG...............................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
.................T------CAAT---------------------------------------------------------------GAGCCAG---GACAAGATGCTGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000100000000000000
........................................................................................................AAGATGCTGGCAAAAAACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................T------CAAT---------------------------------------------------------------GAGCCAG---GACAAGATGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGC---------CCTGGTTCAAGCTGTTGCC................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCTGTTGCCGCATATGAC.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGC---------CCTGGTTCAAGCTGTT...................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..............................................................................................CCAG---GACAAGATGCTGGCAAAAAACGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CATC-AGTGGCTT------CAAT---------------------------------------------------------------GAGCCAG---GA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AAT---------------------------------------------------------------GAGCCAG---GACAAGATGCTGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGTTGCCGCATATGA........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................TGCTGGCAAAAAACGGTAAGTT-----GAT---------------T........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................AGCCAG---GACAAGATGCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGGTTCAAGCTGTTGCCGC..............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-TA-------------------------------------------------------------------CCTCCAACA-TTTGTAG........................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CAAT---------------------------------------------------------------GAGCCAG---GACAAGATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........................................................................................GAGCCAG---GACAAGATGCTGGCAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTCAAGCTGTTGCCGCATATGACG......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAAGCTGTTGCCGCA.............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGGTTCAAGCTGTTGCCGCA.............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCGC---------CCTGGTTCAAGCTGTTGCCGCA.............................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................AG---GACAAGATGCTGGCAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................CCAG---GACAAGATGCTGGCAAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CAAT---------------------------------------------------------------GAGCCAG---GACAAGATGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.........................................................................................................AGATGCTGGCAAAAAACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..........AGTGGCTT------CAAT---------------------------------------------------------------GAGCCAG---GACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAA---------------GATAATTGTTGTGGCCT................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................AAT---------------------------------------------------------------GAGCCAG---GACAAGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.........................AAT---------------------------------------------------------------GAGCCAG---GACAAGATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.............................................................................................GCCAG---GACAAGATGCTGGCAAAAAACGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TT------CAAT---------------------------------------------------------------GAGCCAG---GACAAGATGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GCATC-AGTGGCTT------CAAT---------------------------------------------------------------GAGCCAG---GACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCGC---------CCTGGTTCAAGCTGTTGCC................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGC---------CCTGGTTCAAGCTGTTGCCGC..............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TT------CAAT---------------------------------------------------------------GAGCCAG---GACAAGATGCTGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TT------CAAT---------------------------------------------------------------GAGCCAG---GACAAGATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CAAT---------------------------------------------------------------GAGCCAG---GACAAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGGTTCAAGCTGTTGCCG...............................2011.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGC---------CCTGGTTCAAGCTGTTGCCGC..............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AGCGGCGTC-TGTGGCTT------CAAT---------------------------------------------------------------GGGACAG---GACAAGATGCTGACAAAAAACGGTAAGTT-----GCT---------------CTAAGAAGTAT----------GCCATCATTGGTGG------------ATGG-----------------------------------------------------------------------------------------------------------------------ATGGATC--------ATGGATCCATTCCCT----ACACATTGGCATGATGTTATA-----------------AATGTATAAATTA------------------------------------------------------------------TTAA-TTCGCTTGATTAAAGAACA---------------TAAACTCATTGTATCCTAT--AAA-ATAC--CAT-TA-------------------------------------------------------------------CCTCCAATA-TTTGTAGGCTACAATGCGC---------ACTGGTACAAGATATTACCGCACATGACGCCTATGAGC-------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................GATCCATTCCCT----ACACATTGG....................................................................................................................................................................................................................................................................................................................................................2111.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATGCGC---------ACTGGTACAAG........................................1911.0010000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATGCGC---------ACTGGTACAAGATAT....................................2411.0010000100
.................................................................................................................................................................................ATCATTGGTGG------------ATGG-----------------------------------------------------------------------------------------------------------------------ATGGATC--------ATGGA...........................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
.......................................................................................................................................GCT---------------CTAAGAAGTAT----------GCGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1530000300
droYak3
AGCGGCATC-AATAGCTT------CAAT---------------------------------------------------------------GGGGCAG---GACAAGATGCTACCAAAAAACGGTAAGTT-----GTT---------------CTACAAATAAT----------ATCATTATAGGTG----------TTAAAAA-----------------------------------------------------------------------------------------------------------------------TTTGAAATAACATTTATGGATACATTCCTC----AC--------ACACTTGCATA-------------------------------------------------------------------------------------------AATGTTTAA-TTTGCTTCATTATAGAAAA---------------GATACTCATTGTGTACATT--TAAATAAC--AAT-AA-------------------------------------------------------------------TCTCCCATA-TTTGTAGGCTACAATGCGC---------CCTGGTACAAGATTTTACCGCATATGACGCCTATGAGC-------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................GACAAGATGCTACCAAAAAACGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000
droEug1
ATCAGCAAC-AGTGGCGT------CCTT---------------------------------------------------------------GGGCCAG---GAAAAGATGTTGCAAAAAAATGGTAAGTT-----AAG---------------CG-------AAGTAAAACTTT-------------------CTGA-----------TCATT-----------------------TAGATCGGTCATA----TTAAGATATAGC--------------------------------------------------------------------------------------GTATACTT----------------------------G--------------------------------------------------------------CAGCAACATAA------------------------------------ATTTATATGTTAAACTA--A----------------------------------AGCACAACATTAGTGGTACCACTATATTGTCCAGTACTTACTATTAATCCCATTCATTACACTCTTCTTCCTCTA-TTTACAGGCTACAATGCGC---------CCTGGTTCAAGTTGCTGCCGCATATGACACCGATGAGC-------------SizeHit CountTotal NormTotal
No Reads
droBia1
GGTAGCAGC-AGCAACTC------CTAC---------------------------------------------------------------GGCT-AC---A-------GCTGGCAC--AGCAGTCAGGT-----GAG---------------TG-------AG----------CTT--AA---GTG----------ACGGGATCTAAAAAAT--ATACTTGGAGAAATCTTAGTTTAAATG----------------AAGACAGCAATGTTACATTTATTTAAAATTGTAGAACCTAAATATCATAGAAAACATTTTAAAAATTTTAAAAATCATAT---------------------------------------------------------------------------------------------------------------------------------------------AGAACACATTTAAAAAAGATTCATTAATTGAAATGAAAATTATTA--------------------CATAAA-------------------------------------------------------------------TTTTAAATATTTTTCGATTCAATACCCATTTATTAAACACTTTTAAAACATTTTATATTTCTGCCTGTTCAAAACC-------------SizeHit CountTotal NormTotal
No Reads
droTak1
ACCACCACCCAGCAGCCA------CAAA---------------------------------------------------------------GACCTTTGGGGGTAAGTTACTGATTAATACAGCTTTGT------------------------TT-------TT----------CCCATCA---CT-----------TCAACAT--------T-------------------------------------------------------TACA------------------------------------------CTTTAGA--TGCTCAACAA-------------------CACGCAC--------GTGATTGTCCAGCAGCAGCC-----------------------GG---T---------T------T---------------------------TAATCCAA--------------------------------------------------------------------------------GC-------------------------------------------------------------------TCCGCAGCA-TCAGGAGCTGATTATGCGC---------CAGGCGGCCATCCAT--CCGTACAACA--ATCGCGTCGTCTATGCGACTTCSizeHit CountTotal NormTotal
No Reads
droEle1
AGCGGCAAC-AGTGGCGT------CCTT---------------------------------------------------------------GGGTCAG---GATAAGATGCTGCCAAAAAACGGTAAGTT-----AAA---------------TG-------AT----------TCC------------------------------------------------------TAGCCCAAACC----------------AAAATAATTTTACT------------------------------------------------------------------------------------------------------------------------------TCTTAGTTATTTAT---T---------T------AAAAAAAATGATTTA----------------GCTCA--------------------------------------------------------------------G-TTAA--TTT-C-CAATTAAAAATAC--------------------------------CCTTCTTGTT-------CACTTCTTGTTCTT-GTTTTAGGCTACAATGCGC---------CCTGGTACAAACTGCTGCCGCATATGACGCCCATGAGC-------------SizeHit CountTotal NormTotal
No Reads
droRho1
TTCGCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-TTTTTAGGCTACAATGCGC---------CCTGGTACAAGCTGCTTCCACAAATGACCCCTATGAGC-------------SizeHit CountTotal NormTotal
No Reads
droFic1
AGCAGCGTC-AGTGGCTT------CCAT---------------------------------------------------------------GGGACAG---GAGAAGATGCTGCCAAAAAACGGTAGGTT-----AAT---------------CA-------GAG-------------------GTGCACAATACAA-----------CAAAATTG-TTTCTTGGAAGTCTTCTTTTCAATCGGCAATTTATCTTCTGAAATTAAGTTTACT------------------------------------------------------------------------------------------------------------------------------TTTGAGTTAATTGATCTTTTAGTTTACT------AAGAAAAATAATAAATGACAGCAACTTAT------------------------------------A------------------------------------------GTTTTAA-AA-------------------------------------------------------------------CCTCCTCTT-CTTTCAGGCTACAATGCTC---------CCTGGTTCAAACTGCTGCCCCACATGACGCCCATGAGC-------------SizeHit CountTotal NormTotal
No Reads
droKik1
AGCCGCGAC-AGTTGCAC------CCTT---------------------------------------------------------------GGGTCAG---GAGAAGGTGTTGCCAAAAAACGGTAAGCCACGTTTATATTAATAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAAGCTCCGATCTAAAT---T---------TTAGCTCTT-----------------------------AACTGACTTAACTTT-G----------------------------------------------------------------------TATCATATTTCAA------------------------------------------------------CCTCTG--A-TTTTCAGGGTACAATGCGCCTAGCCATCCCTGGTACAAGCTCCTGCCGCAGATGCCGCCCATGACC-------------SizeHit CountTotal NormTotal
No Reads
droAna3
TATTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------------------------------------------TTTAAAAAT-G-----------AATAAA-ATTAGTACTTGGAA----------------------TAA-CTGTTTCAT-AA-------------------------------------------------------------------TCTTCC--C-TTTTTAGGATACAATGCGCCTAGCCATGCCTGGTATAAGCTGCTCCCACAGATGCCACCAATAACA-------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATACAATGCGCCTAGCCATGCCTGGT.............................................2811.001100000
droBip1
TCAATT-TA-TGTAAATG------CTGT---------------------------------------------------------------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTAAAAAAAAATAA---T---------T------GA-----------------------------ATGAATG------------------------------------------------------------------A-TAAC--TTG-C-AAATTAAACATAA-------------------------------------------------------------------ACA---AACAATACGC---------ACGTATCCCAGATGCGACTGTGGATGAAAACT-TGTAT-------------SizeHit CountTotal NormTotal
No Reads
dp5
ACCACC-TC-TGTGGCAGTCACGTCGAT---AGT-----------------GCATGGCCACG------GCCAGGGCCAGGGTCA-------GGGCCAG---GAGAAAGTGTTGCCAAAAAACGGTAGGAT-----TCTATATAGAAGTAGGATCAG--------------------------CAGTGAAGATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC--CAT-AA-------------------------------------------------------------------TCTCTCTTATCCCGCAGGCTACAATGCGCCTAGCCATCCATGGTACAAGATTCTGCCACAAATGCCGCCCATGACC-------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............GGCAGTCACGTCGAT---AGT-----------------GCATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.............GGCAGTCACGTCGAT---AGT-----------------G..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.......TC-TGTGGCAGTCACGTCGAT---A..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
.........................................................CCACG------GCCAGGGCCAGGGTCA-------GG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010100000000
droPer2
ACCACC-TC-TGTGGCAGTCACGTCGAT---AGT-----------------GCATGGCCACGGCCACGGCCAGGGCCAGGGTCA-------GGGCCAG---GAGAAAGTGTTGCCAAAAAACGGTAGGAT-----TCTATATAGAAGTAGGATCAG--------------------------CAGTGAAGATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC--CAT-AA-------------------------------------------------------------------TCTCTCTTATCCCGCAGGCTACAATGCGCCTAGCCATCCATGGTACAAGATTCTGCCACAAATGCCGCCCATGACC-------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................CACGTCGAT---AGT-----------------GCATGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002010001
...........................................................................................GGGCCAG---GAGAAAGTGTTGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000002
...................................................................GGCCAGGGCCAGGGTCA-------GGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2121.002200000
....................ACGTCGAT---AGT-----------------GCATGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
..............................................................................GGGTCA-------GGGCCAG---GAGAAAGTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
droWil2
GTTC--------------------TGGC---------------------------------------------------------------TGGACAG---GATAAGTTGTTGACAAAAAATGGTAAGAT-----CA-------------------------AG----------GTCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------------------------------------------TCCAAATAT-C-----------AAGAAA-CGAAATAGTTGGCT----------------------TAT-CAAT--TTT-TA-------------------------------------------------------------------TCCCCA-TT-GTCGCAGGTTACAACGA---TAGCTATGCCTGGTATAAACTATTGCCGCAAATGCCGCCCATGACC-------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................GGC---------------------------------------------------------------TGGACAG---GATAAGTTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
...........................................................................................TGGACAG---GATAAGTTGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
...............................................................................................CAG---GATAAGTTGTTGACAAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
........................TGGC---------------------------------------------------------------TGGACAG---GATAAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
droVir3
GGCGGGATC-GGTGTCGG------TGTCGGCGTCGGTCTGCCACAGCCGATGCACGGCG------------GTGGCGGGGGCGGCGGCGTCGGC-TAT---CACC---ATATGGCACATAGAGGTAGATC-----AAA---------------TA-------GAACAACACGAT-------------------CTCA-----------AAAAC---------------------------------------------------C--------------------------------------------------------------------------------------GCATCCAT----------------------------AT---AACCATGCACAGAAATTTAT---T---------T------AA-----------------------------AACAAAATTAATTTC-T----------------------------------------------------------------------TTACACAATATTAGCTGCATCTCACAGGTGAAGTGTTCATGCTGCCATTGCCTA---------------------------------------------------------TCAGAATATTGCCA-ATGCCCCGACCACAAGC-------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................GCACGGCG------------GTGGCGGGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002002000000000000000000000000000000000000000000000000000000000000
........................................................................................GTCGGC-TAT---CACC---ATATGGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000010000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCA-ATGCCCCGACCACAAGC-------------2111.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................ATATGGCACATAGAGGTAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTCATGCTGCCATT...........................................................................................................1711.001000000000000000000000000000000000000000000000000000000000000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCCA-ATGCCCCGAC....................1711.001000000000000000000000000000000000000000000000000000000000000001
......................................................................................................ACC---ATATGGCACATAGAGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGTGTTCATGCTGCCAT............................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
........................................................................................GTCGGC-TAT---CACC---ATATGGCAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................ATAGAGGTAGATC-----AAA---------------TA-------GAACAACAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000001000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGTGAAGTGTTCATGC..................................................................................................................1811.001000000010000000000000000000000000000000000000000000000000000000
...............CGG------TGTCGGCGTCGGTCTGCCACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................AA---------------TA-------GAACAACACGAT-------------------CTCA-----------AA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................AGAGGTAGATC-----AAA---------------TA-------GAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000100000000000000000000000000
........................................................................................................C---ATATGGCACATAGAGGTAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCACAGGTGAAGTGTTCAT....................................................................................................................2011.001000000000000000000000000000000000001000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTC-T----------------------------------------------------------------------TTACACAATATTAGCTGC..........................................................................................................................................2211.001000000000000000000000000000000001000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCACAGGTGAAGTGTTCATGCTGCCAT............................................................................................................2811.001000000000000000000000000000000000010000000000000000000000000000
.............GTCGG------TGTCGGCGTCGGTCTGCCACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..........GGTGTCGG------TGTCGGCGTCGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.331001000000000000000000000000000000000000000000000000000000000000
droMoj3
GGCGGCGGC-GGCGGCGT------CGGC---------------------------------------------------------------GGC-TAT---CACCACAATATGGCACACAGAGGTAGATC-----AAA---------------TA-------GAACAACACGAT-------------------CTCA-----------AAAAC---------------------------------------------------C--------------------------------------------------------------------------------------GCATCCAT----------------------------AT---AACCATGCACAGAAATTTAT---T---------T------AA-----------------------------ATCAAAATTAATTTC-T----------------------------------------------------------------------TTACACAATATTAGCTGCATCACACAGGTGAAGTGTTCATGCTGCCATTGCCAATCACTATA-----ATGCCAATG---CCCCGACCACAAGCAGA----------GCGGCTGCAGCTGCAGCAGCGACAGCAG--CAGCAGC-------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................................GTAGATC-----AAA---------------TA-------GAACAACACGAT-------------------C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTC-T----------------------------------------------------------------------TTACACAATATTAG..............................................................................................................................................2011.001100000
........................................................................................................................................AA---------------TA-------GAACAACACGAT-------------------CT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.501100000
droGri2
GTCGGCGTC-GGTC--TGCCA---CA-------------------GCCGATGCACGGCGGCG------GCAGTGGTGGTGGTGGCGGCGGTGGC-TAT---CACCCCAATATGGCCAACAGAGGTAGATC-----AAA---------------TA-------GAACAACACGAT-------------------CTCA-----------AAAAC---------------------------------------------------C--------------------------------------------------------------------------------------GCATCCAT----------------------------ATACTAACAATGTACAGAAATTTAT---T---------T------AA-----------------------------AACAAAATTAATTTC-T----------------------------------------------------------------------TTACACAATATTAGCTGCATCTCACAGGTGAAGT---------------------------------------------------------------------------GTTCATGCTGCCATTGCCTATCACAGTAATG-CC-------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....GCGTC-GGTC--TGCCA---CA-------------------GCCGATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110
..................CCA---CA-------------------GCCGATGCACGGCGGCG------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101
........................................................GCGGCG------GCAGTGGTGGTGGTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50110

Generated: 05/18/2015 at 12:14 PM