ID:

dsi_21238

 Coordinate:

2l:9645109-9645258 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.6 -23.5 -23.4

Flybase annnotation

exon [2l_9645259_9645435_-]; five_prime_UTR [2l_9645259_9645435_-]; intron [2l_9642733_9645258_-]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GTTTCCCTGCAAATCCCGTCCAGAGTGCGATAATCCTGACTCTCCTAAGGGTAAGGACTCCACTTGAGTGCACACGAACAGCTGTGCTCATGCAAGGGGATGAAGTGAATCCAAAGAAAAGGATACAAAAATTAATTTATAAAAAATAAAAATTATTGGTGTAATTAATGTGTTAAGTTTTAAATAAAACGCACAATCAATTAATCTGTGACAATCGCAAACAAAAGCAAGACAAGTTTTATAAATTTAC
**************************************************........(((.((((...(((((........))))).....)))).)))(((..((.((((........)))).))........(((((.....)))))((((((....))))))..(((((...(((((....)))))))))).))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 M053
female body
 M023
head
 GSM343915
embryo
 M025
embryo
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
................................................................TGAGAGAACATGAACAGCTGTGC................................................................................................................................................................... 23 3 1 2.00 2 2 0 0 0 0 0 0 0 0 0
........................................TCAGCTAAGGGTAAGGATTCC............................................................................................................................................................................................. 21 3 2 1.50 3 0 0 3 0 0 0 0 0 0 0
..............................................AAGGGTAAGGACTCCACT.......................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................................................CAAAGAAAAGCAATACAAGTTTTA......... 24 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0
...TCCCTGCACCTCCCGTCCAGAGTGC.............................................................................................................................................................................................................................. 25 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................AAAACGCACAATCAATTAATCTGTGAC...................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
....................................................AAGGACTCCACTTGAGTGC................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................CTGTTATGTTTTAAATAAAAC............................................................ 21 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................TGAATCCAAAGGAAAGG................................................................................................................................ 17 1 3 0.33 1 0 0 0 0 0 0 1 0 0 0
...................................................................................................ATGCAGTGTATCCAAAGA..................................................................................................................................... 18 2 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..................................CCTGACTCTCTTAAGGTA...................................................................................................................................................................................................... 18 3 20 0.10 2 0 0 0 0 0 0 0 2 0 0
..........................................AGCTAAGGGTAAGGATTCC............................................................................................................................................................................................. 19 3 14 0.07 1 0 0 0 0 0 0 0 0 1 0
.........................................CAGCTAAGGGTAAGGATTC.............................................................................................................................................................................................. 19 3 17 0.06 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................GGGGATGTAGTCAATC........................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0
...............................................................................................................CAAAGAAAAGGATAAA........................................................................................................................... 16 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................ATGAATCCAAAGAAA................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

CAAAGGGACGTTTAGGGCAGGTCTCACGCTATTAGGACTGAGAGGATTCCCATTCCTGAGGTGAACTCACGTGTGCTTGTCGACACGAGTACGTTCCCCTACTTCACTTAGGTTTCTTTTCCTATGTTTTTAATTAAATATTTTTTATTTTTAATAACCACATTAATTACACAATTCAAAATTTATTTTGCGTGTTAGTTAATTAGACACTGTTAGCGTTTGTTTTCGTTCTGTTCAAAATATTTAAATG
**************************************************........(((.((((...(((((........))))).....)))).)))(((..((.((((........)))).))........(((((.....)))))((((((....))))))..(((((...(((((....)))))))))).))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M023
head
CAATGGGACGTTTAGGGCAGG..................................................................................................................................................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
..............................ATTAGGACTGAGAAGATTCTA....................................................................................................................................................................................................... 21 3 2 1.00 2 0 0 2 0 0 0
..........................................................................................................CTTAGGCTTCTCTTCCTCTGTT.......................................................................................................................... 22 3 1 1.00 1 0 0 0 1 0 0
......................CTCACGCTATTAGGACTGAGAGGAT........................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0
..................................................................TCTCTTGTACTTGTCGACACGA.................................................................................................................................................................. 22 3 1 1.00 1 0 1 0 0 0 0
.................................................................................................CCTTCTTCACTCAGGTTTCGT.................................................................................................................................... 21 3 2 0.50 1 0 1 0 0 0 0
...............................TTAGGACTGAGAAGATTCTAA...................................................................................................................................................................................................... 21 3 2 0.50 1 0 0 1 0 0 0
.......................................................................TATGCTGGTCGACACGAGT................................................................................................................................................................ 19 2 3 0.33 1 0 0 0 0 0 1
.......................................................................TATGGTTGTCGACACGAGT................................................................................................................................................................ 19 2 4 0.25 1 0 0 0 0 0 1
............................................................................................................TAGGTTACTTTTTCTATGTT.......................................................................................................................... 20 2 7 0.14 1 0 0 0 1 0 0
..................................GGTCAGAGGGGATTCCCA...................................................................................................................................................................................................... 18 3 11 0.09 1 0 0 0 1 0 0
........CGTTAAGGTCAGGTCTC................................................................................................................................................................................................................................. 17 2 20 0.05 1 0 0 0 1 0 0
..............................................................................GTCGACACAAGTAGGTCCC......................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:9645059-9645308 - dsi_21238 GTTTCCC-------TGC------AAATCCCG--TCCAGAGTGCGATA---------------ATCCTGACTCTCC-TAAGGGTAAGGACTCCACTTGAGTGCACA--------------CGAA------CAGCTGTGCTCATGCAAGGGGATGAAGTGAATCCAAAGAAA------------------------------------------------------------------A------------GGATACAAA---A-------ATTAATTTATA----------------------------------------------------------AAAAA-------TAAAAATTATTGGTGTAATTAATGTGTTAAGTTTTAAATAAAA------CGCACAATCAATT------AATCTGTGACA-----------------------ATCGC-------AA-----------------------------------------------------------------------------------------------------------ACAAAA----GCAAGA-------------------------------------C-----------------------------------------------------AAGTTTTATAAAT-----------------T----TAC
droSec2 scaffold_3:5393847-5394096 - GTTTCCC-------TGC------AAATCCCG--TCCAGAGTTCGATA---------------ATCCTGACTCTCC-TAAGGGTAAGGACTCCACTTGAGTGCACA--------------CGAA------CAGCTGTGCTCATGCAAGGGGATGAAGTGAATCCAAAGAAA------------------------------------------------------------------A------------GGATACAAA---A-------ACTAATGTATA----------------------------------------------------------AAAAA-------TAAAAATTATTGGTGTAATTCATGTGTTAGGTTTTAAATAAAA------CGCACTATCAATT------AATCTGTGACA-----------------------ATCGC-------AA-----------------------------------------------------------------------------------------------------------ACAAAA----GCAAGA-------------------------------------C-----------------------------------------------------ATATTTTATAAAT-----------------T----TAC
dm3 chr2L:9947053-9947315 - GTTTCCC-------TGC------AAATCCCT--TCCAGAGTGCGTTA---------------ATCCTGACTCTCT-TAAGGGTAAGGACTCCACTTGAGTGCACA--------------CACA------CAGCTGTGCTCATGCAAGGGGATGAAGTGAATCCAAAGAAA------------------------------------------------------------------A------------GGATACAAA---A-------ATTAATGTATA----------------------------------------------------------AAAAA-------TGAAAATTATTGGTGTAATTAATGTGATAAGTTTTAAATAAAA------CGCACTATCAATT------AATCTGTGACA-----------------------ACCGC-------A--------------------------------------------------------------------------------------------ATACGAGTGAGC--CAACAAAA----GCAAGA-------------------------------------C-----------------------------------------------------ATATTTTATAAAT-----------------T----TAC
droEre2 scaffold_4929:10567259-10567500 - TT-CTC------T-TGC------A-ATCCCT--TCCAGAGTGCGTGA---------------ATCCTGAATCCTTCCAAGGGTAAGGACTTCGCCTGAGTGCACA--------------C--A------CAGCTGTGCTGATACGAGGGGAGGATGTGAAACCTAGGAAA------------------------------------------------------------------A------------GGATACTAA---A----A--ACCAATTTTGG------------------GA--------------------------------------AAATATACAAATTATAAATAATTGGTGTAATCAATTTTTTAAGTTTTAAATAAAACCAAAGCGTACTGTCAAGA------AATCTGTG----------------------------------------------------------------------------------------------------------------------------------------AGTG----------------------A-------------------------------------C-----------------------------------------------------TAATTTTATAAAT-------------------------
droYak3 2L:12637568-12637841 - TC--CCC-------TGC------A-ATCCCT--TCCAGAGTGCGATA---------------ATCCTGACTCTTC-CAAGGGTAAGGACTTCGCCCGAGTGCACA--------------CACA------CAGCTGTGCTCATACGAGGCGTTGAAGTGAAACCTAAGAAA------------------------------------------------------------------A------------GGATACAAA---A-------ATAATTATATA---TAAAAAAAA-TTTAAA-----------------------------------------AAT-------TCAATATGATTGGTGTAATCAATTTGTTAAGTTTGAAATAAAAGCCAAGCGTACTATCAATT------AATCTGTGACC-----------------------ATCAC-------A--------------------------------------------------------------------------------------------ATATGAGTGA----TAACAAAA----CCAAGA-------------------------------------C-----------------------------------------------------TTGTTTTATAAAC-----------------T-------
droEug1 scf7180000409554:4964833-4965054 + TTGTCCT-------TAT------AAATCTCT--TCCAGAGTGTGATA---------------GTCCTGACACTTT-AAAGGGTAAGGACTTCCCTTAAGTGTG----------------------------------GGCATAAAAAAAAATCAAGTGTAATCTAAATAC------------------------------------------------------------------A------------AAATTTTAA----------------------------------------AGTTTTAAAGTTTGCGCCTT-----------------------------------------------TAATT----TATGAATTTT-------------------------------------------AA-----------------------ATTAT-------ATAAAAAATACATAATTGTCAAACCTTAAAGTTT--GTGAT--TTAT-----------------------------------GTTAAATCA--ATCTGAGTGAAA--A--------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000301468:47985-48225 - TC-TCC------T-TGC------A-GTCCCAA-TCCCAAGTGTGATA---------------ATCCTGACTCTTG-AAAGGGTAAGGACTCCCCTTGAGTGGCTC-----------A--GCGC------G--------------------TTAAATAGGAACCCAA-AAA------------------------------------------------------------------A------------GGATCCCTA---A--------TACATGTATA------A------T----------------------------------------------------------------------------------TAAAATTTTAAATAAAAT-----C----------------------------------------------------------------------------------------------------GTGCT--TAATATTCATTTTTATAAATACTGGT--------------TCGACATA--AACCGAGTGAAA--CAATAAAG----CCAA---------------------------------------T---------------------ATATTGTACAAATTGGGAAAACACAGAAT------------AAAG-----------------T----GAT
droTak1 scf7180000415667:566106-566301 + TC-TCC------T-TGT------G-ATCCCT--TCCAAAGTGTGATA---------------ATCCTGACTCTTG-AAAGGGTAAGGACTCCCC-TGAGTGAAGG--------------ATGC------A--------------------ATCAAGTGG---------AA------------------------------------------------------------------A------------GGATAAAGGATAATTGAAGAATAATAATAAA---TACAA-CAT-TTTAAAAAAACA---------------------------------------------------CTA------------------------------------------------------------------------------------------------------------------------------------------TTTGAGATTATAATTCTTA--------AATAAAAAA-TCTACAACTTGTG---------------ATTAAA------------------------------------------------------------------------------------------------------------------------AAAG-----------------------TTT
droEle1 scf7180000491186:3000019-3000332 - TC-TCC------T-TGC------A-ATCCCT--GACACAGTGTGATA---------------GTCCTGACTCTTA-AAAGGGTAAGGACTTCGTTTGCA------A-------------CG-C--------------GTCTTAAAGAAAGATCAAATGCCATCTGAA-AG--------------------------------------------------------AGGATAATAAATATTTAATAAAAT----------------------------------ATT---------------TTTAAGTGCACGGCTTA----------------------------------------------AAATT----AATAAACTTTCAAACAAAACCCAAACGGACAA----TG-------------------------------------------------------------------CTATCGAACTTTAGGAGTT--GTGAA--TAATTCTTA--------TATACTGGA--------------TCAAACAA--TCCTGAGTGACA--AAATATA--------------------------------------------------------------TTTCCAACAAAATGTGAAATGTTCAAAAACACATAACAATAAGTTTTATAAAACATGA------------------AG
droRho1 scf7180000779234:247273-247582 + TC-TCC------T-TGC------A-ATCCCT--GTCAGAGAGTGATA---------------ATCCTGACTCTCA-AAAGGGTAAGGACTTCCCTTGT----ACAA-------------CGCG------CTGCTGTCCTTCTAATAG---ATTAAATTTCCTTTGAA-GG--------------------------------------------------------AGGATAAAAAAGAACTAAAAAAAT------------------------TA----------T------T----------------------------------------------------------------------------------TACATTTTTAAATAAAACCCAAACAGACAA----TT-------------------------------------------------------------------TTGTCGAACATTAAAAGTT--GTGAA--TAATTTGTATTACTGGACATACTGGA--------------TTAAACAA--TTCAGAGTGACA--AAATAAATCCAAGCAAAACTAAAAGTGTGGG------------------------T-----------------------------------------------------GGATTTTATAAGATACGACTAGGATAAATGTGATTTTT
droFic1 scf7180000449514:975-1228 - GTTCTCC-----T-TGC------C-ATCCTT--GCTAGAGTGTGATT---------------ATCCTGACTCCTA-AAAAAGTAAGGATTCGTCTTGAGTGAAAA--------------A----------CGTTCTGGATATACAAAATAATAAAGTGTAATTTGCTAAAAGAAACACAAAATAAAATATGAATTTGTTTCCCTGAAAAAATATTTGCAATAAAGGACGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAAAGAAGCTTAATAAACA--------------------------------------------------AAGTGACTTCTGAACAATAAATAACTGAGTAAAACGTATTAAAA----TTGAGT-------------------------------------A-----------------------------------------------------CTA--------------------------------TTT
droKik1 scf7180000302677:176783-177080 + GTTCTC-----------------------CT--GCTAAAGTGTAAAA---------------ATCCTGACTCTCATAAAGGGTAAGGATCTTAGTAA-----TTATAGAGCCGCGAAAGT-------------T---GTT----------ATGAATAAAAACTAATAAAA-------------------------------------------------------------------------------T----------------------------------ATA------------TGTGCAATGTTTGTGTTCTTCAATAAACATTATTTAATAGAAAA-------TACAAATTATAA-------------------------------------------A----TACCTTTTTAATTGGGATCCTGTTAATAATAATAATATTATATTATCAAAGTAAAGAATAAAAGC---------------------------------------------------------T--------------TTAAACAA--TAT---------------------------------------------------------TAACTGTGACAAAAAATAATGTTTTTCTAACATCAAGTGAA-------GAGATTTAAAAG------------GAAA-----------------T----CAC
droAna3 scaffold_12916:13786513-13786725 - TTTCTTC-------TATAAA---AAATCCTT--GCAAGAGTGCTAAT---------------ATCCTGACTCAAATCGAGGGTAAGGATCCCAAAGAAGTGATT-----------------GATTTCCACAGC-----------------------------TAAAGAAA------------------------------------------------------------------A------------AGAAATCAA---A-------ATTT-TTTATAAATTATTT-CAA-CTAAAA----------------------------------------------------------------------------------------------TTTAAGT-----------------------------------------------------------------------------------------------GATTTGAGAGTTAAGAGTTTG--------AATAAAAATTTATGTAACACCTGGATAATAAAAGA------------------------CTAAGA--------------------------------------------------------------------------------------------AGTTTTACA----------------------------
droBip1 scf7180000396535:750478-750728 - GTTTCGATTTCTTCTATAAAAAAAAATCCTT--GCAAAAGTGCTCAA---------------ATCCTGACTCTTATTGAGGGTAAGGATAACAAAGAAGTGATT-----------------GCTTTCTAAAGC-----------------------------TTAAAAAA------------------------------------------------------------------AT-----------AGCTAT-AG---A-------ATTG-TACACAAATTATTG-AAAATTAAAA----------------------------------------------------------------------------------------------TTTAAGT-----------------------------------------------------------------------------------------------GATTTGAGAG----AATTTTT--------AATAAAAATTGATGTAATAAATCAATAAATAAATG------------------------TGGGGG-------------AGTTTTAAATAAAATAAAGTGTAAC-----------------------------------------------------ATTGTTTTTAAG-----------------------TTC
dp5 4_group3:222666-222826 + GATCCGT-------TCC------GAATTCTTAGCCCACGAAGTGATAGTAGTTCTACAGCACCTGCTGACGTTCA-AACGGGTAAGGATTTCCCAAAAACGGATA--------------GCGC------GATCTTGTCTAATACAAGAAAATAAAATATAAAACACGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAAA-----------------------ATCGC-------AAAAAAAATAAAT---------------------------------------------------------------------------------------------------------------A-------------------------------------A-----------------------------------------------------AA------------------------------------
droPer2 scaffold_1:1697509-1697669 + GTTCCGT-------TCC------GAATTCTTAGCCCAAGAAGTGATAGTAGTTCTACAGCACCTGCTGACGTTCA-AACGGGTAAGGATTTCCCAAAAACGGAAA--------------GCGC------GATCTTGTCTAATACAAGAAAATAAAATATAAAACACGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAAA-----------------------ATCGC-------AAAAAAAATAAAT---------------------------------------------------------------------------------------------------------------A-------------------------------------A-----------------------------------------------------AA------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GTTTCCC-------TGC------AAATCCCG--TCCAGAGTGCGATA---------------ATCCTGACTCTCC-TAAGGGTAAGGACTCCACTTGAGTGCACA--------------CGAA------CAGCTGTGCTCATGCAAGGGGATGAAGTGAATCCAAAGAAA------------------------------------------------------------------A------------GGATACAAA---A-------ATTAATTTATA----------------------------------------------------------AAAAA-------TAAAAATTATTGGTGTAATTAATGTGTTAAGTTTTAAATAAAA------CGCACAATCAATT------AATCTGTGACA-----------------------ATCGC-------AA-----------------------------------------------------------------------------------------------------------ACAAAA----GCAAGA-------------------------------------C-----------------------------------------------------AAGTTTTATAAAT-----------------T----TACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................AAGGGTAAGGACTCCACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................AAAA------CGCACAATCAATT------AATCTGTGAC..................................................................................................................................................................................................................................................................................................2711.00100010000000000000
...................................................................................AAGGACTCCACTTGAGTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
droSec2
GTTTCCC-------TGC------AAATCCCG--TCCAGAGTTCGATA---------------ATCCTGACTCTCC-TAAGGGTAAGGACTCCACTTGAGTGCACA--------------CGAA------CAGCTGTGCTCATGCAAGGGGATGAAGTGAATCCAAAGAAA------------------------------------------------------------------A------------GGATACAAA---A-------ACTAATGTATA----------------------------------------------------------AAAAA-------TAAAAATTATTGGTGTAATTCATGTGTTAGGTTTTAAATAAAA------CGCACTATCAATT------AATCTGTGACA-----------------------ATCGC-------AA-----------------------------------------------------------------------------------------------------------ACAAAA----GCAAGA-------------------------------------C-----------------------------------------------------ATATTTTATAAAT-----------------T----TACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................................................A------CAGCTGTGCTCATGCAAGGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
..............................G--TCCAGAGTTCGATA---------------ATCCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
.........................ATCCCG--TCCAGAGTTCGATA---------------ATCCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
GTTTCCC-------TGC------AAATCCCG--TCCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
...TCCC-------TGC------AAATCCCG--TCCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
........................AATCCCG--TCCAGAGTTCGATA---------------ATCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
dm3
GTTTCCC-------TGC------AAATCCCT--TCCAGAGTGCGTTA---------------ATCCTGACTCTCT-TAAGGGTAAGGACTCCACTTGAGTGCACA--------------CACA------CAGCTGTGCTCATGCAAGGGGATGAAGTGAATCCAAAGAAA------------------------------------------------------------------A------------GGATACAAA---A-------ATTAATGTATA----------------------------------------------------------AAAAA-------TGAAAATTATTGGTGTAATTAATGTGATAAGTTTTAAATAAAA------CGCACTATCAATT------AATCTGTGACA-----------------------ACCGC-------A--------------------------------------------------------------------------------------------ATACGAGTGAGC--CAACAAAA----GCAAGA-------------------------------------C-----------------------------------------------------ATATTTTATAAAT-----------------T----TACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................CT--TCCAGAGTGCGTTA---------------AT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................AAGGGGATGAAGTGAATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................AAATCCCT--TCCAGAGTGCGTTA---------------ATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................AGAGTGCGTTA---------------ATCCTGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................C------AAATCCCT--TCCAGAGTGCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000
......................................................................TCTCT-TAAGGGTAAGGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TCCAGAGTGCGTTA---------------ATCCTGACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................T--TCCAGAGTGCGTTA---------------ATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................ATA----------------------------------------------------------AAAAA-------TGAAAATTATT.....................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TTTCCC-------TGC------AAATCCCT--TCCAGAGTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-------A--------------------------------------------------------------------------------------------ATACGAGTGAGC--CAACAAA............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................AAA------------------------------------------------------------------A------------GGATACAAA---A-------ATTAATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................T--TCCAGAGTGCGTTA---------------ATCCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................CAGAGTGCGTTA---------------ATCCTGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......C-------TGC------AAATCCCT--TCCAGAGTGCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TCCCT--TCCAGAGTGCGTTA---------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.............................CT--TCCAGAGTGCGTTA---------------ATCCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................GAGTGCACA--------------CACA------CAGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................GCTCATGCAAGGGGATGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................GTGCGTTA---------------ATCCTGACTCTCT-..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................TTATTGGTGTAATTAATGTGA.....................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CCCT--TCCAGAGTGCGTTA---------------A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
......................................................................................GACTCCACTTGAGTGCACA--------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CC-------TGC------AAATCCCT--TCCAGAGTGCGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
GTTTCCC-------TGC------AAATCCCT--TCCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TGC------AAATCCCT--TCCAGAGTGCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................GAGTGCGTTA---------------ATCCTGACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................C------AAATCCCT--TCCAGAGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TTCCC-------TGC------AAATCCCT--TCCAGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
............................................................................................................................................ATGCAAGGGGATGAAGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.................................................................................................................................CAGCTGTGCTCATGCAAGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................CCAGAGTGCGTTA---------------ATCCTGACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................ATCCCT--TCCAGAGTGCGTTA---------------ATCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................ACA--------------CACA------CAGCTGTGCTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................ATCCCT--TCCAGAGTGCGTTA---------------ATCCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGA-------------------------------------C-----------------------------------------------------ATATTTTATAAT..........................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...............GC------AAATCCCT--TCCAGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................AAGGGGATGAAGTGATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17170.1220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TT-CTC------T-TGC------A-ATCCCT--TCCAGAGTGCGTGA---------------ATCCTGAATCCTTCCAAGGGTAAGGACTTCGCCTGAGTGCACA--------------C--A------CAGCTGTGCTGATACGAGGGGAGGATGTGAAACCTAGGAAA------------------------------------------------------------------A------------GGATACTAA---A----A--ACCAATTTTGG------------------GA--------------------------------------AAATATACAAATTATAAATAATTGGTGTAATCAATTTTTTAAGTTTTAAATAAAACCAAAGCGTACTGTCAAGA------AATCTGTG----------------------------------------------------------------------------------------------------------------------------------------AGTG----------------------A-------------------------------------C-----------------------------------------------------TAATTTTATAAAT-------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................AACCAAAGCGTACTGTCAAGA------............................................................................................................................................................................................................................................................................................................2112.0020000020
.....C------T-TGC------A-ATCCCT--TCCAGAGTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
.........................ATCCCT--TCCAGAGTGCGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
.........................ATCCCT--TCCAGAGTGCGTGA---------------ATCCTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................CAAGA------AATCTGTG----------------------------------------------------------------------------------------------------------------------------------------AGTG----------------------A-------------------------------------C-----------------------------------------------------T.....................................2011.0010000010
droYak3
TC--CCC-------TGC------A-ATCCCT--TCCAGAGTGCGATA---------------ATCCTGACTCTTC-CAAGGGTAAGGACTTCGCCCGAGTGCACA--------------CACA------CAGCTGTGCTCATACGAGGCGTTGAAGTGAAACCTAAGAAA------------------------------------------------------------------A------------GGATACAAA---A-------ATAATTATATA---TAAAAAAAA-TTTAAA-----------------------------------------AAT-------TCAATATGATTGGTGTAATCAATTTGTTAAGTTTGAAATAAAAGCCAAGCGTACTATCAATT------AATCTGTGACC-----------------------ATCAC-------A--------------------------------------------------------------------------------------------ATATGAGTGA----TAACAAAA----CCAAGA-------------------------------------C-----------------------------------------------------TTGTTTTATAAAC-----------------T-------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................AGAGTGCGATA---------------ATCCTGACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000
...............................................................................GGGTAAGGACTTCGCCCGAGTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
................................................................................................................................................................................................................................................................................................................................................................................................................GTACTATCAATT------AATCTGTGA...................................................................................................................................................................................................................................................................................................2111.00101000000000
...............................................................................................CGAGTGCACA--------------CACA------CAGCTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.....................................GAGTGCGATA---------------ATCCTGACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.........................ATCCCT--TCCAGAGTGCGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
..........................................................................................TCGCCCGAGTGCACA--------------CACA------CAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
droEug1
TTGTCCT-------TAT------AAATCTCT--TCCAGAGTGTGATA---------------GTCCTGACACTTT-AAAGGGTAAGGACTTCCCTTAAGTGTG----------------------------------GGCATAAAAAAAAATCAAGTGTAATCTAAATAC------------------------------------------------------------------A------------AAATTTTAA----------------------------------------AGTTTTAAAGTTTGCGCCTT-----------------------------------------------TAATT----TATGAATTTT-------------------------------------------AA-----------------------ATTAT-------ATAAAAAATACATAATTGTCAAACCTTAAAGTTT--GTGAT--TTAT-----------------------------------GTTAAATCA--ATCTGAGTGAAA--A--------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TC-TCC------T-TGC------A-GTCCCAA-TCCCAAGTGTGATA---------------ATCCTGACTCTTG-AAAGGGTAAGGACTCCCCTTGAGTGGCTC-----------A--GCGC------G--------------------TTAAATAGGAACCCAA-AAA------------------------------------------------------------------A------------GGATCCCTA---A--------TACATGTATA------A------T----------------------------------------------------------------------------------TAAAATTTTAAATAAAAT-----C----------------------------------------------------------------------------------------------------GTGCT--TAATATTCATTTTTATAAATACTGGT--------------TCGACATA--AACCGAGTGAAA--CAATAAAG----CCAA---------------------------------------T---------------------ATATTGTACAAATTGGGAAAACACAGAAT------------AAAG-----------------T----GATSizeHit CountTotal NormTotal
No Reads
droTak1
TC-TCC------T-TGT------G-ATCCCT--TCCAAAGTGTGATA---------------ATCCTGACTCTTG-AAAGGGTAAGGACTCCCC-TGAGTGAAGG--------------ATGC------A--------------------ATCAAGTGG---------AA------------------------------------------------------------------A------------GGATAAAGGATAATTGAAGAATAATAATAAA---TACAA-CAT-TTTAAAAAAACA---------------------------------------------------CTA------------------------------------------------------------------------------------------------------------------------------------------TTTGAGATTATAATTCTTA--------AATAAAAAA-TCTACAACTTGTG---------------ATTAAA------------------------------------------------------------------------------------------------------------------------AAAG-----------------------TTTSizeHit CountTotal NormTotal
No Reads
droEle1
TC-TCC------T-TGC------A-ATCCCT--GACACAGTGTGATA---------------GTCCTGACTCTTA-AAAGGGTAAGGACTTCGTTTGCA------A-------------CG-C--------------GTCTTAAAGAAAGATCAAATGCCATCTGAA-AG--------------------------------------------------------AGGATAATAAATATTTAATAAAAT----------------------------------ATT---------------TTTAAGTGCACGGCTTA----------------------------------------------AAATT----AATAAACTTTCAAACAAAACCCAAACGGACAA----TG-------------------------------------------------------------------CTATCGAACTTTAGGAGTT--GTGAA--TAATTCTTA--------TATACTGGA--------------TCAAACAA--TCCTGAGTGACA--AAATATA--------------------------------------------------------------TTTCCAACAAAATGTGAAATGTTCAAAAACACATAACAATAAGTTTTATAAAACATGA------------------AGSizeHit CountTotal NormTotal
No Reads
droRho1
TC-TCC------T-TGC------A-ATCCCT--GTCAGAGAGTGATA---------------ATCCTGACTCTCA-AAAGGGTAAGGACTTCCCTTGT----ACAA-------------CGCG------CTGCTGTCCTTCTAATAG---ATTAAATTTCCTTTGAA-GG--------------------------------------------------------AGGATAAAAAAGAACTAAAAAAAT------------------------TA----------T------T----------------------------------------------------------------------------------TACATTTTTAAATAAAACCCAAACAGACAA----TT-------------------------------------------------------------------TTGTCGAACATTAAAAGTT--GTGAA--TAATTTGTATTACTGGACATACTGGA--------------TTAAACAA--TTCAGAGTGACA--AAATAAATCCAAGCAAAACTAAAAGTGTGGG------------------------T-----------------------------------------------------GGATTTTATAAGATACGACTAGGATAAATGTGATTTTTSizeHit CountTotal NormTotal
No Reads
droFic1
GTTCTCC-----T-TGC------C-ATCCTT--GCTAGAGTGTGATT---------------ATCCTGACTCCTA-AAAAAGTAAGGATTCGTCTTGAGTGAAAA--------------A----------CGTTCTGGATATACAAAATAATAAAGTGTAATTTGCTAAAAGAAACACAAAATAAAATATGAATTTGTTTCCCTGAAAAAATATTTGCAATAAAGGACGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAAAGAAGCTTAATAAACA--------------------------------------------------AAGTGACTTCTGAACAATAAATAACTGAGTAAAACGTATTAAAA----TTGAGT-------------------------------------A-----------------------------------------------------CTA--------------------------------TTTSizeHit CountTotal NormTotal
No Reads
droKik1
GTTCTC-----------------------CT--GCTAAAGTGTAAAA---------------ATCCTGACTCTCATAAAGGGTAAGGATCTTAGTAA-----TTATAGAGCCGCGAAAGT-------------T---GTT----------ATGAATAAAAACTAATAAAA-------------------------------------------------------------------------------T----------------------------------ATA------------TGTGCAATGTTTGTGTTCTTCAATAAACATTATTTAATAGAAAA-------TACAAATTATAA-------------------------------------------A----TACCTTTTTAATTGGGATCCTGTTAATAATAATAATATTATATTATCAAAGTAAAGAATAAAAGC---------------------------------------------------------T--------------TTAAACAA--TAT---------------------------------------------------------TAACTGTGACAAAAAATAATGTTTTTCTAACATCAAGTGAA-------GAGATTTAAAAG------------GAAA-----------------T----CACSizeHit CountTotal NormTotal
No Reads
droAna3
TTTCTTC-------TATAAA---AAATCCTT--GCAAGAGTGCTAAT---------------ATCCTGACTCAAATCGAGGGTAAGGATCCCAAAGAAGTGATT-----------------GATTTCCACAGC-----------------------------TAAAGAAA------------------------------------------------------------------A------------AGAAATCAA---A-------ATTT-TTTATAAATTATTT-CAA-CTAAAA----------------------------------------------------------------------------------------------TTTAAGT-----------------------------------------------------------------------------------------------GATTTGAGAGTTAAGAGTTTG--------AATAAAAATTTATGTAACACCTGGATAATAAAAGA------------------------CTAAGA--------------------------------------------------------------------------------------------AGTTTTACA----------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................AATCCTT--GCAAGAGTGCTAAT---------------ATCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.................................GCAAGAGTGCTAAT---------------ATCCTGACTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
......C-------TATAAA---AAATCCTT--GCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
droBip1
GTTTCGATTTCTTCTATAAAAAAAAATCCTT--GCAAAAGTGCTCAA---------------ATCCTGACTCTTATTGAGGGTAAGGATAACAAAGAAGTGATT-----------------GCTTTCTAAAGC-----------------------------TTAAAAAA------------------------------------------------------------------AT-----------AGCTAT-AG---A-------ATTG-TACACAAATTATTG-AAAATTAAAA----------------------------------------------------------------------------------------------TTTAAGT-----------------------------------------------------------------------------------------------GATTTGAGAG----AATTTTT--------AATAAAAATTGATGTAATAAATCAATAAATAAATG------------------------TGGGGG-------------AGTTTTAAATAAAATAAAGTGTAAC-----------------------------------------------------ATTGTTTTTAAG-----------------------TTCSizeHit CountTotal NormTotal
No Reads
dp5
GATCCGT-------TCC------GAATTCTTAGCCCACGAAGTGATAGTAGTTCTACAGCACCTGCTGACGTTCA-AACGGGTAAGGATTTCCCAAAAACGGATA--------------GCGC------GATCTTGTCTAATACAAGAAAATAAAATATAAAACACGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAAA-----------------------ATCGC-------AAAAAAAATAAAT---------------------------------------------------------------------------------------------------------------A-------------------------------------A-----------------------------------------------------AA------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................GTAGTTCTACAGCACCTGCTGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020020000000
.....GT-------TCC------GAATTCTTAGCCCACGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.........................ATTCTTAGCCCACGAAGTGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100000
...........................................GATAGTAGTTCTACAGCACCTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
..............TCC------GAATTCTTAGCCCACGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...CCGT-------TCC------GAATTCTTAGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
.....GT-------TCC------GAATTCTTAGCCCAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
...............................................GTAGTTCTACAGCACCTGCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
......................................................TACAGCACCTGCTGACGTTCA-AAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010000000
droPer2
GTTCCGT-------TCC------GAATTCTTAGCCCAAGAAGTGATAGTAGTTCTACAGCACCTGCTGACGTTCA-AACGGGTAAGGATTTCCCAAAAACGGAAA--------------GCGC------GATCTTGTCTAATACAAGAAAATAAAATATAAAACACGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAAA-----------------------ATCGC-------AAAAAAAATAAAT---------------------------------------------------------------------------------------------------------------A-------------------------------------A-----------------------------------------------------AA------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..TCCGT-------TCC------GAATTCTTAGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
....................................AAGAAGTGATAGTAGTTCTACAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002200000
.......................................AAGTGATAGTAGTTCTACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002200000
...CCGT-------TCC------GAATTCTTAGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.........................................................AGCACCTGCTGACGTTCA-AAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...............................................GTAGTTCTACAGCACCTGCTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
........................AATTCTTAGCCCAAGAAGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
...CCGT-------TCC------GAATTCTTAGCCCAAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
..................................................GTTCTACAGCACCTGCTGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
GTTCCGT-------TCC------GAATTCTTAGCCCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
................................................TAGTTCTACAGCACCTGCTGACGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000
...CCGT-------TCC------GAATTCTTAGCCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
............................................................ACCTGCTGACGTTCA-AAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.........................................GTGATAGTAGTTCTACAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
.....................................................CTACAGCACCTGCTGACGTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
GTTCCGT-------TCC------GAATTCTTAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...............................................GTAGTTCTACAGCACCTGCTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000

Generated: 05/18/2015 at 12:29 PM