ID:dsi_21236 |
Coordinate:3l:7974448-7974509 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -7.8 | -7.5 | -7.0 |
 |
 |
 |
exon [3l_7974272_7974447_-]; CDS [3l_7974272_7974447_-]; CDS [3l_7974510_7975250_-]; exon [3l_7974510_7975250_-]; intron [3l_7974448_7974509_-]
No Repeatable elements found
| ##################################################--------------------------------------------------------------################################################## GCATATGTGATGGCTAAGGTAATCTCGTATGGTGGGCCCAAGTACTTGAAGTAAGTCCTGTAGACATGTGTATCGTGTATGTGTTTAATGCTATTGGTTTTCCCTTACACAGGCATGCTGCAAAGGAATGTCCACCATTGGCCATGGCTATTGCTTTGCAGA **************************************************(((((.((.(((((((((.....)))))............)))).))......)))))....************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | O002 Head |
SRR553487 NRT_0-2 hours eggs |
SRR553485 Chicharo_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|
| ..............................................................................................TGGTTTTCCCTTACACAG.................................................. | 18 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...TATGTAATGGCAAAGGTAACCT......................................................................................................................................... | 22 | 3 | 2 | 0.50 | 1 | 0 | 1 | 0 |
| ..............................................TGTGGTAAGTCCTGTAGACT................................................................................................ | 20 | 3 | 10 | 0.10 | 1 | 0 | 0 | 1 |
| ............................GTGGGGGGCCCAAGTCCT.................................................................................................................... | 18 | 3 | 20 | 0.05 | 1 | 0 | 1 | 0 |
|
CGTATACACTACCGATTCCATTAGAGCATACCACCCGGGTTCATGAACTTCATTCAGGACATCTGTACACATAGCACATACACAAATTACGATAACCAAAAGGGAATGTGTCCGTACGACGTTTCCTTACAGGTGGTAACCGGTACCGATAACGAAACGTCT
**************************************************(((((.((.(((((((((.....)))))............)))).))......)))))....************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM343915 embryo |
M053 female body |
SRR553486 Makindu_3 day-old ovaries |
SRR553487 NRT_0-2 hours eggs |
SRR553488 RT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................................TTCTTTAAAGGTGGTAACCG.................... | 20 | 2 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 | 0 |
| .........................................................................................................................TTTCCTTCAAGGTGTTAACCG.................... | 21 | 3 | 8 | 0.13 | 1 | 0 | 1 | 0 | 0 | 0 |
| .......................................................................................................GAGTTTGTCCGTACGA........................................... | 16 | 2 | 20 | 0.10 | 2 | 0 | 0 | 1 | 1 | 0 |
| ..................................................................................................................................AGGTCGTACCCGGTAC................ | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 |
Generated: 04/24/2015 at 10:34 AM