dsi_21034

exon [2l_16338071_16338174_+]; CDS [2l_16338071_16338174_+]; intron [2l_16338175_16341126_+]

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- AGGTCACTGTAGCCAGTATCGATGATGCTGAGGAGTTCTCCCTCACCGATGTAATTGCCCTCTCCTTATTTGATTCTAAATTTCGTTTTTATATTGTTGATTGACACTTAGATACTTATTATTTATTTGGCTAAACTACTACTATTTGATCTATCGTAATCTATTTTAGAGCAATTTATAGCTAGTTGGTTAACTATTGCGTACCGCTATCGTATCGTAAATGGATTAGGCCACTCCCTATATCCGCTTA ************************************************........................(((((...(((.((..........)).)))...)))))..............((((((((.((((((....(((.((((..(((...)))..)))).)))....))).))))))))))).......************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M025 embryo	GSM343915 embryo	M024 male body	SRR553485 Chicharo_3 day-old ovaries	SRR553488 RT_0-2 hours eggs	SRR553487 NRT_0-2 hours eggs	M053 female body
.................ATCGATGATGCTGAGGAGTTCTCCCT...............................................................................................................................................................................................................	26	0	1	4.00	4	4	0	0	0	0	0	0
.................ATCGATGATGCTGAGGAGTTCTC..................................................................................................................................................................................................................	23	0	1	2.00	2	2	0	0	0	0	0	0
.....ACTGTAGCCAGTATCGATGATGCT.............................................................................................................................................................................................................................	24	0	1	1.00	1	1	0	0	0	0	0	0
.................ATCGATGATGCTGAGGAGTTCCCCCT...............................................................................................................................................................................................................	26	1	1	1.00	1	1	0	0	0	0	0	0
........................................................................................................................................................................................................GTACCGCTATCGTATCGTAAATGGA.........................	25	0	1	1.00	1	0	0	1	0	0	0	0
.................ATCGATGATGCTGAGGAGTTCTCCCC...............................................................................................................................................................................................................	26	1	1	1.00	1	1	0	0	0	0	0	0
AGGTCACTGTAGCCAGTAT.......................................................................................................................................................................................................................................	19	0	1	1.00	1	0	1	0	0	0	0	0
.......................................................................................................................TATTTATTTGGCTAAACT.................................................................................................................	18	0	1	1.00	1	0	0	0	1	0	0	0
........GTAGCCAGTATCGATGATGCTGA...........................................................................................................................................................................................................................	23	0	1	1.00	1	0	1	0	0	0	0	0
.................ATCGATGATGCTGAGGAG.......................................................................................................................................................................................................................	18	0	1	1.00	1	0	0	1	0	0	0	0
....................GATGATGCTGAGGAGTTCT...................................................................................................................................................................................................................	19	0	1	1.00	1	0	1	0	0	0	0	0
...........................................................................................................................................................................................................................AATGGATTAGGCCACTCCC............	19	0	1	1.00	1	1	0	0	0	0	0	0
...................CGATGATGCTGAGGAGTTCTCCCT...............................................................................................................................................................................................................	24	0	1	1.00	1	1	0	0	0	0	0	0
..................TCGATGATGCTGAGGAGTTCTCCCT...............................................................................................................................................................................................................	25	0	1	1.00	1	1	0	0	0	0	0	0
..............AGTATCGATGATGCTGAGGAGT......................................................................................................................................................................................................................	22	0	1	1.00	1	0	1	0	0	0	0	0
................................GAGTTCTCCCTCACCGATC.......................................................................................................................................................................................................	19	1	2	0.50	1	0	1	0	0	0	0	0
.........................................CTAACCGATATAATTGTCCT.............................................................................................................................................................................................	20	3	5	0.20	1	0	0	0	0	1	0	0
............................................ACCGATCTAATTGTCCT.............................................................................................................................................................................................	17	2	9	0.11	1	0	0	0	0	1	0	0
..................................................................................................................................................................................TAGCTAGTTGGTTGA.........................................................	15	1	13	0.08	1	0	0	0	0	0	1	0
.......................................................................................................................................................................................AGTTGGTTAAGGCTTGCG.................................................	18	3	20	0.05	1	0	0	0	0	0	0	1

TCCAGTGACATCGGTCATAGCTACTACGACTCCTCAAGAGGGAGTGGCTACATTAACGGGAGAGGAATAAACTAAGATTTAAAGCAAAAATATAACAACTAACTGTGAATCTATGAATAATAAATAAACCGATTTGATGATGATAAACTAGATAGCATTAGATAAAATCTCGTTAAATATCGATCAACCAATTGATAACGCATGGCGATAGCATAGCATTTACCTAATCCGGTGAGGGATATAGGCGAAT ************************************************........................(((((...(((.((..........)).)))...)))))..............((((((((.((((((....(((.((((..(((...)))..)))).)))....))).))))))))))).......************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR618934 dsim w501 ovaries	M024 male body	SRR553487 NRT_0-2 hours eggs
.....................................................................................................................................................................................................AGGCAAGGCGATAGCATA...................................	18	2	4	0.25	1	1	0	0
.................................TCAGGAGGTAGTGGCTA........................................................................................................................................................................................................	17	2	13	0.15	2	0	0	2
.............................................................GAGGACTAGACTCAGATTT..........................................................................................................................................................................	19	3	9	0.11	1	0	1	0
.......................................................................................................................................................................................................GCAAGGCGATAGCATAA..................................	17	2	10	0.10	1	1	0	0
................................CTCAATAGGGGGTGGGTAC.......................................................................................................................................................................................................	19	3	12	0.08	1	0	1	0
...............................................................................................................................................TAAACTAGATAACATTAC.........................................................................................	18	2	18	0.06	1	0	0	1
.....................................................................................................................................................................................GGTCAACCAGTTGAAAACGC.................................................	20	3	20	0.05	1	0	1	0

Species	Coordinate	ID	Alignment
droSim2	2l:16338125-16338374 +	dsi_21034	AGGTCACTGTAGCCAGTATCGATGATGCTGAGGAGTTCTCCCTCACCGATGTAATTGCCCT------CTCCT-TATTTGAT--T-------------CTAAATTTC-------GT--T-TTTATATTGTTGAT--TGACACTTAGATACTTATTATT--TATTTGGCTAAAC-TACTACTATTT-----------------------GATCTATCGTAATCTATTTTAGAGCAAT--TT-ATAGCT------------AGTTGGTTAACTAT-----------------------------------------------TGCGTACCGCTAT------------------------------------------------CGTATCGTAAAT---------------GGA-------------TTAGGCCA-CT------------CCC-------TA-TATCC---GCTTA
droSec2	scaffold_7:418181-418430 +		AGGTCACTGTAGCCAGTATCGATGATGCTGAGGAGTTCTCCCTCACCGATGTAATTGCCCT------CTCCT-TATTTGAT--T-------------CTAGATTTC-------AT--T-TTTATATTGTTGAT--TGACACTTAGATACTTATTACT--TATTTGGCTAAAC-TACTACTATTT-----------------------GATCTATCGTAATCTATTTTAGAGCAAT--TT-ATAGCT------------AGTTGGTTAACTAT-----------------------------------------------TGCGTACCGCTAT------------------------------------------------CGTATCGTAAAT---------------GGA-------------TTAGGCCA-CT------------CCC-------TA-TATCC---GCTTA
dm3	chr2L:16771397-16771647 +		AGGTCACTGTAGCCAGTATCGATGATGCTGAGGAGTTCTCCCTCACCGATGTAATTGCCCT------CTCCT-TATTTGAT--T-------------CTAAATTTC-------GT--T-TTTATATTGTTGAT--TGACACTTAGATACTTATAATT--TATTTGGCTAAAC-TACTACTATTT-----------------------GATCTATCGTAATCTATTTTAGAGCAAT--TT-ATAGCT------------AGTTGGTTAACTAT-----------------------------------------------TGCGTACCGCTAT------------------------------------------------CGTATCGTAAAT---------------GGA-------------TTAGGCCA-CT------------CCC------CTA-TATCC---GCTTA
droEre2	scaffold_4845:19842111-19842358 +		AGGTCACTGTAGCCAGTATCGATGATGCTGAGGAGTTCTCCCTCACCGATGTAATTGCCCT------CTCCT-TACTTGAT--T-------------CTAAATTTC-------GT--T-TTTATATTGTTGAT--TGACACTCAGATACTTATTACT--TATTTGGCTAAGC-TACTACTATTT-----------------------GAACTATCGTAATCTATTTTAGAGCAAT--TT-ATAGCT------------AGTTGGTTAACTAT-----------------------------------------------TGCGTACCGCTAT------------------------------------------------CGTATCGTAAAT---------------GGA-------------TTAGGCCA-CT------------CCC-------TA---TCC---GCTTA
droYak3	2R:4330356-4330603 -		AGGTCACTGTAGCCAGTATCGATGATGCTGAGGAGTTCTCCCTCACCGATGTAATTGCCCT------CTCCT-TATTTGAT--T-------------CTAAATTTC-------GT--T-TTTATATTGTTGAT--TGACACTTAGATACTTATTACT--TATTTGGCTAAAC-TACTACTATTT-----------------------GAACTATCGTAATCTATTTTAGAGCAAT--TT-ATAGCT------------AGTTGGTTAACTAT-----------------------------------------------TGCGTACCGCTAT------------------------------------------------CGTATCGTAAAT---------------GGA-------------TTAGGCCA-CC------------CCC-------TA---TCC---GCTTA
droEug1	scf7180000408961:344365-344614 +		AGGTCACTGTAGCCAGTATCGATGATGCTGAGGAGTTCTCCCTCACCGATGTAATTGCCCC------TTCCT-TATTTGAT--T-------------CTAAATTTC-------GT--T-TTTATATTGTTGAT--TGACACTTAGATATTTA------CTATTTGGCTAAAC-TACTGCT---C-----------------------GAACTATCGTAATCTATCTTAGAGCAATATTT-ATAGCT-------A---TAGTTGGCTAACTATTT----T--------------------------------------ATTGCGTACTGCTAT------------------------------------------------CGTATCGTAAAT---------------GGA-------------TTAGGCTA-CA------------CCC-------TA---TCC---GCTTA
droBia1	scf7180000301468:939281-939534 +		AGGTCACTGTAGCCAGTATCGATGATGCTGAGGAGTTCTCCCTCACCGATGTAATTGCCCT------ATCCT-TATTTGAA--T-------------CTAAATTTC-------GT--T--TTATATTGTTGATATTGACACTTAGATACTTATTACT--TATTTGGCTAAAC-TACTACTAT-T-----------------------GAAATATTGCAATCAATTTTAGAGCAAC--TT-ATGGCT------------AGTTGGTTAACTATAT----T--------------------------------------ATTGCGTACCGCTAT------------------------------------------------CGTATCGTAAAT---------------GGA-------------TTAGGCCAACC------------CCC-------TA---TCC---GCTTA
droTak1	scf7180000415914:518189-518443 +		AGGTCACTGTAGCCAGTATCGATGATGCTGAGGAGTTCTCCCTCACCGATGTAATTGCCCC------CTCCT-TATATGATTAT-------------CTAAATTTC-------GT--T-TTTATATTGTTGAT--TGACACTTAGATACTTATTACT--TATTTGGCTAAAC-TACTACTAT-C-----------------------GAAATATCGTAATCTATTTTAGAGCAACACT--TTAGCT------------AGTTGGTTAACTATTT----T--------------------------------------ATTGCGTACCGCTAT------------------------------------------------CGTATCGTAAAT---------------GGA-------------TTAGGCCA-CC------------CCT-------TA---TCC---GCTTA
droEle1	scf7180000490579:571035-571280 -		AGGTCACTGTAGCCAGTATCGATGATGCTGAGGAGTTCTCCCTCACCGATGTAATTTCCCC------CTCCT-TATATGAT--T-------------CTAAATTTC-------GT--T-TTTATATTGTTGAT--TGACACTTAGATACTTA------TTATTTGGCTAAAC-TACTACT---C-----------------------GAACTATCGTAAACTATTTTAGAGCAAT--TT-ATAGCT------------AGTTGGTTAACCATTT----T--------------------------------------ATTGCGTATCGCTAT------------------------------------------------CGTATCGTATAT---------------GGA-------------TTAGGCCA-CA------------CCC-------TA---TCC---GCTTA
droRho1	scf7180000780103:210838-211083 -		AGGTCACTGTAGCCAGTATCGATGATGCTGAGGAGTTCTCCCTCACCGATGTAATTGCCCC------CTCCT-TATATGAT--T-------------CTAAATTTC-------GT--T-TTTATATTGTTGAT--TGACACTTAGATACTTA------TTATTTGGCTAAAC-TACTACT---C-----------------------GAACTATCGTAATCTATTTTAGAGCAAT--TT-ATAGCT------------AGTTGGTTAACCATTT----T--------------------------------------ATTGCGTACCGCTAT------------------------------------------------CGTATCGTAAAT---------------GGA-------------TTAGGCCA-CA------------CCC-------AA---TCC---GCTTA
droFic1	scf7180000454078:698303-698548 +		AGGTCACTGTAGCCAGTATCGATGATGCTGAGGAGTTCTCCCTCACCGATGTAATTGCCCC------CTCCT-TATACGAT--T-------------CTAAATTTC-------GT--T-TTTATATTGTTGAT--TGACACTTAGATAATTA---C---TATTTGGCTAAGC-TACTACT---C-----------------------GAACTATCGTAATCTATTTTAGAGCTAC--TT-CTAGCT------------AGTTGGTTAACTATTT----T--------------------------------------ATTGCCTTCTGCTAT------------------------------------------------CGTATCGTAAAT---------------GGA-------------TTAGGCCA-CT------------CCC-------GA---TCC---GCTTA
droKik1	scf7180000302472:37486-37731 +		AGGTCACTGTACCCAGTATCGATGATGCTGAGGAGTTCTCCCTCACCGATGTAATTGTCCC------CACCTTTATATGAT--T-------------CTAAATTTC-------GT--T-TTTATATTGTTTAT--TGACACTTAGATATTTA------TTATTTGGCTAAAC-TACTACT---T-----------------------AAATGATCGTAATCTATTTTAGAGCAAT--TT-ATATCT------------AGTTGGTTAACTATT-----T--------------------------------------ATTGCGTACCGCTAT------------------------------------------------CGTATCGTAAAT---------------GGA-------------TTAGGCCA-CA------------CCC-------TA---TCC---GCTTA
droAna3	scaffold_12916:7330976-7331220 +		AGGTCACTGTACCCAGTATCGATGATGCTGAGGAGTTCTCCCTCACCGATGTAATTGTCCC------CTT-----TTTGAT--T-------------CTAAATTTT------AGTTTT-TTTATATTGTTGAT---------------CTAATTACTATTATTTGGCTAAAC-TACTACT---T-----------------------GAACAATCGTAATCTATTTTAGAGCAAT--TT-ATATCT------------AGTTGGTTAATTATTACTATA--------------------------------------ATTGCGTATCGCTAT------------------------------------------------CGTATCGTAAAT---------------GGA-------------TTAGGCCA-CA------------CAC-------AA---TCCTTGGCTTG
droBip1	scf7180000396566:500757-500996 +		AGGTCACTGTACCCAGTATCGATGATGCTGAGGAGTTCTCCCTCACCGATGTAATTGTCCC------CTT-----TTTGAT--T-------------CTAAATTTC-------GT--TTTTTATATTGCTGAT---------------CTAATTACTATTATTTGGCTAAAC-TACTACT---T-----------------------GAACAATCGTAATCTATTTTAGAGCAAT--TT-ATATCT------------AGTTGGTTAATTATTATTATA--------------------------------------ATTGCGTATCGCTAT------------------------------------------------CGTATCGTAAAT---------------GGA-------------TTAGGCCA-CA------------CAC-------TA---TCC---GCTTG
dp5	4_group3:3009266-3009521 -		AGGTCACTGTAGCCAGTATCGATGATTCTGAGGAGTTCAATCTCACAGATGTAATTGCCCC-------TCAA-TATTTGAT--T-------------CTAAATTTT-------GT--TACTTATATTGTTGGC--CTAAACCTAGATAT--A------TTA------------------------------------------------------TTAATCCATATTTGAGCAAT--TATTTATCTATTATCTATTGTAGTTGGTTAACTATTCT---T-------TTTTT-------------TTTGCG---------CGCGTATTGCTAT------------------------------------------------CGTATCGTATATATTGTTGAAAACAAT--C-------------TTAGGCCA-CA------------CTC-------TT---TCTGCTGCTTA
droPer2	scaffold_1:4496010-4496266 -		AGGTCACTGTAGCCAGTATCGATGATTCTGAGGAGTTCAATCTCACAGATGTAATTGCCCC-------TCAA-TATTTGAT--T-------------CTAAATTTT-------GT--TACTTATATTGTTGGC--CTAAACCTAGATAT--A------TTA------------------------------------------------------TTAATCCATATTTGAGCAAT--TATTTATCTATTATCTATTGTAGTTGGTTAACTATTT----T-------TTTTT-------------TTTGCG---------CGCGTATTGCTAT----------------------------------------------ATCGTATCGTATATATTGTTGAAAACAAT--C-------------TTAGGCCA-CA------------CTC-------TT---TCTGCTGCTTA
droWil2	scf2_1100000004577:1128853-1129062 +		AGGTTACTGTGCCCAGTATCGATGATGCTGAGGAATTCTCCCTCACAGATGTAATTGTCCCAAAACTCTCTC-TATCTAATAACCCAAAAGCCAAAACAAAA---A-------GT--T-T--TTTTTATTTAT--TAACTCTTGCTAAGTAA------TTCGTAGGCCAAAA-AAAC-------------------------------------------------------AAA--AC-ACACCG------------AATTCA-------ATA----T--------------------------------------TATGCTTAGCTCTAT----------------------------------------------------------------------------GA-------------TTATCCCA-AA------------CCC-------TA---TGA---AC---
droVir3	scaffold_12963:10118317-10118605 +	dvi_11203	AGGTTACTGTGCCCAGTATCGATGATTCTGAGGAATTCCACCTCACAGATGTAATTGTCCT------T-----CATATGAT--A-------------CAAG----C-------GT--G--TTATATTGTTTAA-TTG-TA--------------------TTTTGGTTACACTTACTACT---AGACACTTATTTTCTTTTCTTT-CGTAATATCGTAAT-------TGAGTAAT--TA-T------------------TTTGGTTAACTTTT---------------------------------TGCTATAGCTTATAGCGTATCGTAATCGTTATCGCTATCGTTATCGTTACCGTTATTACCGT-TA-TCGTATATCGTAGCGTTTAC---------------G----------------TAGGTCT-------------------ATACGCTTCTATCT---GGCTA
droMoj3	scaffold_6500:2798548-2798803 +		AGGTCACTGTGCCCAGTATCGATGATTCTGAGGAATTCATCCTCACCGATGTAATTGTGCA------A-AAA-GTTTTTAC--T-------------TTATTT----------GTTCT-TTTTTATTGTATTT--T--TAC--------T-----------------------TACTACT---AGAC---------------TTTACGTATTATCGTAATT------GAAGTAAT--TT-ATATA--------------------------ATT----T-------TTTTTTTCAATTTAACTCTTTGCCATA--------------GCTAT------------------CGTTATCGTTAT---CGTTTA-TCGTATATCGTAGCGTTTAC---------------GTAGGCCAAAGACAGATAC--------------------GTCTACACGCT------------TTA
droGri2	scaffold_15252:13252479-13252787 +		AGGTTACTGTGCCCAGTATCGATGATAATGAGGAAATGAACCTCACAGATGTAATTGTCCC------A--CA-TATTAGAT--A-------------CAAAA---CGTTTTTCA-------TTAATTGTTTTTATTG----------------------TATTTGGTTACACTTACTACT---CGAC---------------TTT-CGTAATATCTT-------AATTGAGTAAT--T--------------------ATTTGGTTAACTCTAT----AATCAATTTTTTA-------------TTTGCT--AGCTTCTAGCGTATCGTAATCGTTATCGCTAACGCTATCGTTATCGTTAT---CGTATACTCGTATATCGTAGCGTTTAC---------------G----------------TAGGCCA-CACAAAACACACTCGTCTAT-CGCTT-TAAAT---GGCTA

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

AGGTCACTGTAGCCAGTATCGATGATGCTGAGGAGTTCTCCCTCACCGATGTAATTGCCCT------CTCCT-TATTTGAT--T-------------CTAAATTTC-------GT--T-TTTATATTGTTGAT--TGACACTTAGATACTTATTATT--TATTTGGCTAAAC-TACTACTATTT-----------------------GATCTATCGTAATCTATTTTAGAGCAAT--TT-ATAGCT------------AGTTGGTTAACTAT-----------------------------------------------TGCGTACCGCTAT------------------------------------------------CGTATCGTAAAT---------------GGA-------------TTAGGCCA-CT------------CCC-------TA-TATCC---GCTTA	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.................ATCGATGATGCTGAGGAGTTCTCCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	4.00	4	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................ATCGATGATGCTGAGGAGTTCTC................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....ACTGTAGCCAGTATCGATGATGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................GTACCGCTAT------------------------------------------------CGTATCGTAAAT---------------GGA-------------.................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................ATCGATGATGCTGAGGAGTTCTCCCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AGGTCACTGTAGCCAGTAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.........................................................................................................................................................TATT--TATTTGGCTAAAC-T..........................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
........GTAGCCAGTATCGATGATGCTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.................ATCGATGATGCTGAGGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................GATGATGCTGAGGAGTTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................AAT---------------GGA-------------TTAGGCCA-CT------------CCC-------................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................CGATGATGCTGAGGAGTTCTCCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................TCGATGATGCTGAGGAGTTCTCCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............AGTATCGATGATGCTGAGGAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
................................GAGTTCTCCCTCACCGATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................	19	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0

droSec2

AGGTCACTGTAGCCAGTATCGATGATGCTGAGGAGTTCTCCCTCACCGATGTAATTGCCCT------CTCCT-TATTTGAT--T-------------CTAGATTTC-------AT--T-TTTATATTGTTGAT--TGACACTTAGATACTTATTACT--TATTTGGCTAAAC-TACTACTATTT-----------------------GATCTATCGTAATCTATTTTAGAGCAAT--TT-ATAGCT------------AGTTGGTTAACTAT-----------------------------------------------TGCGTACCGCTAT------------------------------------------------CGTATCGTAAAT---------------GGA-------------TTAGGCCA-CT------------CCC-------TA-TATCC---GCTTA	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
..........AGCCAGTATCGATGATGCTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	3.00	3	0	0	3	0
...................CGATGATGCTGAGGAGTTCTCCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0
.................ATCGATGATGCTGAGGAGTTCTCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0
.....................ATGATGCTGAGGAGTTCTCCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0
........................ATGCTGAGGAGTTCTCCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0
........GTAGCCAGTATCGATGATGCTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0
..........AGCCAGTATCGATGATGCTGAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0
..................................................................................................................................................................................................................................................................AGTTGGTTAACTAT-----------------------------------------------TGCGTACC.................................................................................................................................................	22	1	1.00	1	0	0	1	0
.................ATCGATGATGCTGAGGAGTTCTCCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0

dm3

AGGTCACTGTAGCCAGTATCGATGATGCTGAGGAGTTCTCCCTCACCGATGTAATTGCCCT------CTCCT-TATTTGAT--T-------------CTAAATTTC-------GT--T-TTTATATTGTTGAT--TGACACTTAGATACTTATAATT--TATTTGGCTAAAC-TACTACTATTT-----------------------GATCTATCGTAATCTATTTTAGAGCAAT--TT-ATAGCT------------AGTTGGTTAACTAT-----------------------------------------------TGCGTACCGCTAT------------------------------------------------CGTATCGTAAAT---------------GGA-------------TTAGGCCA-CT------------CCC------CTA-TATCC---GCTTA	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
....CACTGTAGCCAGTATCGATGATGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................CGATGATGCTGAGGAGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................TCGATGATGCTGAGGAGTTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..GTCACTGTAGCCAGTATCGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................CGATGATGCTGAGGAGTTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................ATCGATGATGCTGAGGAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....ACTGTAGCCAGTATCGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............AGTATCGATGATGCTGAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................GATGCTGAGGAGTTCTCCCTCACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................CGATGATGCTGAGGAGTTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........AGCCAGTATCGATGATGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................TAT------------------------------------------------CGTATCGTAAAT---------------GGA-------------TTAGGC...........................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........AGCCAGTATCGATGATGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................GCTGAGGAGTTCTCCCTCACCGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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........................ATGCTGAGGAGTTCTCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................	17	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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...................CGATGATGCTGAGGAGTTCTCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.....................ATGATGCTGAGGAGTTCTCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................TTTAGAGCAAT--TT-ATAGCT------------AGTTGGT...............................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............GTATCGATGATGCTGAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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...................................................................................................................................................................................................................................AGAGCAAT--TT-ATAGCT------------AGTTG.................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................GATGATGCTGAGGAGTTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........AGCCAGTATCGATGATGCTGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..GTCACTGTAGCCAGTATCGATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

AGGTCACTGTAGCCAGTATCGATGATGCTGAGGAGTTCTCCCTCACCGATGTAATTGCCCT------CTCCT-TACTTGAT--T-------------CTAAATTTC-------GT--T-TTTATATTGTTGAT--TGACACTCAGATACTTATTACT--TATTTGGCTAAGC-TACTACTATTT-----------------------GAACTATCGTAATCTATTTTAGAGCAAT--TT-ATAGCT------------AGTTGGTTAACTAT-----------------------------------------------TGCGTACCGCTAT------------------------------------------------CGTATCGTAAAT---------------GGA-------------TTAGGCCA-CT------------CCC-------TA---TCC---GCTTA	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
...................CGATGATGCTGAGGAGTTCTCCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	3.00	3	0	0	0	0	1	2	0
...................CGATGATGCTGAGGAGTTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	0	1	0	1	0
........................ATGCTGAGGAGTTCTCCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	0	0	0	0	0	2	0
...................CGATGATGCTGAGGAGTTCTCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	2.00	2	0	1	0	0	0	1	0
....................GATGATGCTGAGGAGTTCTCCCTCACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0
.......................GATGCTGAGGAGTTCTCCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0
....................................................AATTGCCCT------CTCCT-TACTTGAT--T-------------.......................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0
.......................GATGCTGAGGAGTTCTCCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0	0	0
....................GATGATGCTGAGGAGTTCTCCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1	0
...............GTATCGATGATGCTGAGGAGTTCTCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0	0	0
......CTGTAGCCAGTATCGATGATGCTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	1	0	0	0
.......................GATGCTGAGGAGTTCTCCCTCACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0
.GGTCACTGTAGCCAGTATCGATGATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................AAT---------------GGA-------------TTAGGCCA-CT------------CCC-------T...............	20	1	1.00	1	0	1	0	0	0	0	0
.................ATCGATGATGCTGAGGAGTTCTCCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0
..GTCACTGTAGCCAGTATCGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1	0
.......................GATGCTGAGGAGTTCTCCCTCACCGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0	0
...................CGATGATGCTGAGGAGTTCTCCCTCACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0
....................GATGATGCTGAGGAGTTCTCCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................ATCGTAAAT---------------GGA-------------TTAGGCCA-CT------------CCC-------................	25	1	1.00	1	0	1	0	0	0	0	0
...................CGATGATGCTGAGGAGTTCTCCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0	0	0
.......................................................................................................................................................ATTACT--TATTTGGCTAAGC-TACTACC....................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0
..................TCGATGATGCTGAGGAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	1	0
........GTAGCCAGTATCGATGATGCTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0	0
AGGTCACTGTAGCCAGTAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0	0	0
...................CGATGATGCTGAGGAGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	1	0

droYak3

AGGTCACTGTAGCCAGTATCGATGATGCTGAGGAGTTCTCCCTCACCGATGTAATTGCCCT------CTCCT-TATTTGAT--T-------------CTAAATTTC-------GT--T-TTTATATTGTTGAT--TGACACTTAGATACTTATTACT--TATTTGGCTAAAC-TACTACTATTT-----------------------GAACTATCGTAATCTATTTTAGAGCAAT--TT-ATAGCT------------AGTTGGTTAACTAT-----------------------------------------------TGCGTACCGCTAT------------------------------------------------CGTATCGTAAAT---------------GGA-------------TTAGGCCA-CC------------CCC-------TA---TCC---GCTTA	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
..........AGCCAGTATCGATGATGCTGAGGAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	23.00	23	0	0	0	0	0	0	0	0	0	0	23
...................CGATGATGCTGAGGAGTTCTCCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	2.00	2	1	0	1	0	0	0	0	0	0	0	0
.......................GATGCTGAGGAGTTCTCCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	0	0	1	0	0	0	1	0	0	0	0
.......................GATGCTGAGGAGTTCTCCCTCACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0
.................ATCGATGATGCTGAGGAGTTCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.......................GATGCTGAGGAGTTCTCCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.....................ATGATGCTGAGGAGTTCTCCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
....CACTGTAGCCAGTATCGATGATGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
..................TCGATGATGCTGAGGAGTTCTCCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
......CTGTAGCCAGTATCGATGATGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
....CACTGTAGCCAGTATCGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0
.....ACTGTAGCCAGTATCGATGATGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.................ATCGATGATGCTGAGGAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
......CTGTAGCCAGTATCGATGATGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................CTATTT-----------------------GAACTATCGTAATCTATT.......................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0

droEug1

AGGTCACTGTAGCCAGTATCGATGATGCTGAGGAGTTCTCCCTCACCGATGTAATTGCCCC------TTCCT-TATTTGAT--T-------------CTAAATTTC-------GT--T-TTTATATTGTTGAT--TGACACTTAGATATTTA------CTATTTGGCTAAAC-TACTGCT---C-----------------------GAACTATCGTAATCTATCTTAGAGCAATATTT-ATAGCT-------A---TAGTTGGCTAACTATTT----T--------------------------------------ATTGCGTACTGCTAT------------------------------------------------CGTATCGTAAAT---------------GGA-------------TTAGGCTA-CA------------CCC-------TA---TCC---GCTTA	Size	Hit Count	Total Norm	Total
No Reads

droBia1

AGGTCACTGTAGCCAGTATCGATGATGCTGAGGAGTTCTCCCTCACCGATGTAATTGCCCT------ATCCT-TATTTGAA--T-------------CTAAATTTC-------GT--T--TTATATTGTTGATATTGACACTTAGATACTTATTACT--TATTTGGCTAAAC-TACTACTAT-T-----------------------GAAATATTGCAATCAATTTTAGAGCAAC--TT-ATGGCT------------AGTTGGTTAACTATAT----T--------------------------------------ATTGCGTACCGCTAT------------------------------------------------CGTATCGTAAAT---------------GGA-------------TTAGGCCAACC------------CCC-------TA---TCC---GCTTA	Size	Hit Count	Total Norm	Total
No Reads

droTak1

AGGTCACTGTAGCCAGTATCGATGATGCTGAGGAGTTCTCCCTCACCGATGTAATTGCCCC------CTCCT-TATATGATTAT-------------CTAAATTTC-------GT--T-TTTATATTGTTGAT--TGACACTTAGATACTTATTACT--TATTTGGCTAAAC-TACTACTAT-C-----------------------GAAATATCGTAATCTATTTTAGAGCAACACT--TTAGCT------------AGTTGGTTAACTATTT----T--------------------------------------ATTGCGTACCGCTAT------------------------------------------------CGTATCGTAAAT---------------GGA-------------TTAGGCCA-CC------------CCT-------TA---TCC---GCTTA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

AGGTCACTGTAGCCAGTATCGATGATGCTGAGGAGTTCTCCCTCACCGATGTAATTTCCCC------CTCCT-TATATGAT--T-------------CTAAATTTC-------GT--T-TTTATATTGTTGAT--TGACACTTAGATACTTA------TTATTTGGCTAAAC-TACTACT---C-----------------------GAACTATCGTAAACTATTTTAGAGCAAT--TT-ATAGCT------------AGTTGGTTAACCATTT----T--------------------------------------ATTGCGTATCGCTAT------------------------------------------------CGTATCGTATAT---------------GGA-------------TTAGGCCA-CA------------CCC-------TA---TCC---GCTTA	Size	Hit Count	Total Norm	Total
No Reads

droRho1

AGGTCACTGTAGCCAGTATCGATGATGCTGAGGAGTTCTCCCTCACCGATGTAATTGCCCC------CTCCT-TATATGAT--T-------------CTAAATTTC-------GT--T-TTTATATTGTTGAT--TGACACTTAGATACTTA------TTATTTGGCTAAAC-TACTACT---C-----------------------GAACTATCGTAATCTATTTTAGAGCAAT--TT-ATAGCT------------AGTTGGTTAACCATTT----T--------------------------------------ATTGCGTACCGCTAT------------------------------------------------CGTATCGTAAAT---------------GGA-------------TTAGGCCA-CA------------CCC-------AA---TCC---GCTTA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

AGGTCACTGTAGCCAGTATCGATGATGCTGAGGAGTTCTCCCTCACCGATGTAATTGCCCC------CTCCT-TATACGAT--T-------------CTAAATTTC-------GT--T-TTTATATTGTTGAT--TGACACTTAGATAATTA---C---TATTTGGCTAAGC-TACTACT---C-----------------------GAACTATCGTAATCTATTTTAGAGCTAC--TT-CTAGCT------------AGTTGGTTAACTATTT----T--------------------------------------ATTGCCTTCTGCTAT------------------------------------------------CGTATCGTAAAT---------------GGA-------------TTAGGCCA-CT------------CCC-------GA---TCC---GCTTA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

AGGTCACTGTACCCAGTATCGATGATGCTGAGGAGTTCTCCCTCACCGATGTAATTGTCCC------CACCTTTATATGAT--T-------------CTAAATTTC-------GT--T-TTTATATTGTTTAT--TGACACTTAGATATTTA------TTATTTGGCTAAAC-TACTACT---T-----------------------AAATGATCGTAATCTATTTTAGAGCAAT--TT-ATATCT------------AGTTGGTTAACTATT-----T--------------------------------------ATTGCGTACCGCTAT------------------------------------------------CGTATCGTAAAT---------------GGA-------------TTAGGCCA-CA------------CCC-------TA---TCC---GCTTA	Size	Hit Count	Total Norm	Total
No Reads

droAna3

AGGTCACTGTACCCAGTATCGATGATGCTGAGGAGTTCTCCCTCACCGATGTAATTGTCCC------CTT-----TTTGAT--T-------------CTAAATTTT------AGTTTT-TTTATATTGTTGAT---------------CTAATTACTATTATTTGGCTAAAC-TACTACT---T-----------------------GAACAATCGTAATCTATTTTAGAGCAAT--TT-ATATCT------------AGTTGGTTAATTATTACTATA--------------------------------------ATTGCGTATCGCTAT------------------------------------------------CGTATCGTAAAT---------------GGA-------------TTAGGCCA-CA------------CAC-------AA---TCCTTGGCTTG	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
...................CGATGATGCTGAGGAGTTCTCCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	15.00	15	0	7	6	0	0	2
...................CGATGATGCTGAGGAGTTCTCCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	3.00	3	0	3	0	0	0	0
...............GTATCGATGATGCTGAGGAGTTCTCCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	2.00	2	0	2	0	0	0	0
...............GTATCGATGATGCTGAGGAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	1	1	0	0	0
...................CGATGATGCTGAGGAGTTCTCCCTCACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	2.00	2	0	2	0	0	0	0
.......................GATGCTGAGGAGTTCTCCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	0	2	0	0	0	0
.....................ATGATGCTGAGGAGTTCTCCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
.................ATCGATGATGCTGAGGAGTTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
..................TCGATGATGCTGAGGAGTTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0
.......................GATGCTGAGGAGTTCTCCCTCACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0
..........................GCTGAGGAGTTCTCCCTCACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
.................................................................................................................................................................TTTGGCTAAAC-TACTACT---T-----------------------GAACAATC.................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0
...................CGATGATGCTGAGGAGTTCTCCCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0
...............GTATCGATGATGCTGAGGAGTTCTCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0
.......................GATGCTGAGGAGTTCTCCCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0
.......................GATGCTGAGGAGTTCTCCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0
......CTGTACCCAGTATCGATGAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0
.....................ATGATGCTGAGGAGTTCTCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0
..................TCGATGATGCTGAGGAGTTCTCCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0
.......................GATGCTGAGGAGTTCTCCCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
...................CGATGATGCTGAGGAGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	2	0.50	1	0	0	0	0	1	0

droBip1

AGGTCACTGTACCCAGTATCGATGATGCTGAGGAGTTCTCCCTCACCGATGTAATTGTCCC------CTT-----TTTGAT--T-------------CTAAATTTC-------GT--TTTTTATATTGCTGAT---------------CTAATTACTATTATTTGGCTAAAC-TACTACT---T-----------------------GAACAATCGTAATCTATTTTAGAGCAAT--TT-ATATCT------------AGTTGGTTAATTATTATTATA--------------------------------------ATTGCGTATCGCTAT------------------------------------------------CGTATCGTAAAT---------------GGA-------------TTAGGCCA-CA------------CAC-------TA---TCC---GCTTG	Size	Hit Count	Total Norm	Total
No Reads

dp5

AGGTCACTGTAGCCAGTATCGATGATTCTGAGGAGTTCAATCTCACAGATGTAATTGCCCC-------TCAA-TATTTGAT--T-------------CTAAATTTT-------GT--TACTTATATTGTTGGC--CTAAACCTAGATAT--A------TTA------------------------------------------------------TTAATCCATATTTGAGCAAT--TATTTATCTATTATCTATTGTAGTTGGTTAACTATTCT---T-------TTTTT-------------TTTGCG---------CGCGTATTGCTAT------------------------------------------------CGTATCGTATATATTGTTGAAAACAAT--C-------------TTAGGCCA-CA------------CTC-------TT---TCTGCTGCTTA	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
...................CGATGATTCTGAGGAGTTCAATCTCACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	1	0	0	0	0	0
...............GTATCGATGATTCTGAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	1
....................GATGATTCTGAGGAGTTCAATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1	0	0	0	0
..........................TCTGAGGAGTTCAATCTCACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........GTAGCCAGTATCGATGATTCTGAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................GAGGAGTTCAATCTCACAGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................ATTCTGAGGAGTTCAATCTCACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...TCACTGTAGCCAGTATCGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....ACTGTAGCCAGTATCGATGATTCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0	0	0	0	0
.............................GAGGAGTTCAATCTCACAGATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................ATGATTCTGAGGAGTTCAATCTCACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................ATCGATGATTCTGAGGAGTTCAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0

droPer2

AGGTCACTGTAGCCAGTATCGATGATTCTGAGGAGTTCAATCTCACAGATGTAATTGCCCC-------TCAA-TATTTGAT--T-------------CTAAATTTT-------GT--TACTTATATTGTTGGC--CTAAACCTAGATAT--A------TTA------------------------------------------------------TTAATCCATATTTGAGCAAT--TATTTATCTATTATCTATTGTAGTTGGTTAACTATTT----T-------TTTTT-------------TTTGCG---------CGCGTATTGCTAT----------------------------------------------ATCGTATCGTATATATTGTTGAAAACAAT--C-------------TTAGGCCA-CA------------CTC-------TT---TCTGCTGCTTA	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
.....................................................................................................ATTTT-------GT--TACTTATATTGTTGGC--C................................................................................................................................................................................................................................................................................................................................................	24	1	2.00	2	2	0	0	0	0	0
................TATCGATGATTCTGAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
................TATCGATGATTCTGAGGAGTTCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
.............................GAGGAGTTCAATCTCACAGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
...................CGATGATTCTGAGGAGTTCAATCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0

droWil2

AGGTTACTGTGCCCAGTATCGATGATGCTGAGGAATTCTCCCTCACAGATGTAATTGTCCCAAAACTCTCTC-TATCTAATAACCCAAAAGCCAAAACAAAA---A-------GT--T-T--TTTTTATTTAT--TAACTCTTGCTAAGTAA------TTCGTAGGCCAAAA-AAAC-------------------------------------------------------AAA--AC-ACACCG------------AATTCA-------ATA----T--------------------------------------TATGCTTAGCTCTAT----------------------------------------------------------------------------GA-------------TTATCCCA-AA------------CCC-------TA---TGA---AC---	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
...................CGATGATGCTGAGGAATTCTCCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	7.00	7	0	4	0	3	0
...................CGATGATGCTGAGGAATTCTCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	2.00	2	2	0	0	0	0
...............GTATCGATGATGCTGAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	2.00	2	0	0	0	2	0
.......................GATGCTGAGGAATTCTCCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0
.......................GATGCTGAGGAATTCTCCCTCACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0
AGGTTACTGTGCCCAGTATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0
..................TCGATGATGCTGAGGAATTCTCCCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0
.................ATCGATGATGCTGAGGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
........GTGCCCAGTATCGATGATGCTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0
...................CGATGATGCTGAGGAATTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1
...................CGATGATGCTGAGGAATTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0
.................ATCGATGATGCTGAGGAATTCTCCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	1
...................CGATGATGCTGAGGAATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
.............CAGTATCGATGATGCTGAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0
........GTGCCCAGTATCGATGATGCTGAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0
...................CGATGATGCTGAGGAATTCTCCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0
...............................................................................................................................................................TCGTAGGCCAAAA-AAAC-------------------------------------------------------A...............................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
.......................GATGCTGAGGAATTCTCCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0

droVir3

AGGTTACTGTGCCCAGTATCGATGATTCTGAGGAATTCCACCTCACAGATGTAATTGTCCT------T-----CATATGAT--A-------------CAAG----C-------GT--G--TTATATTGTTTAA-TTG-TA--------------------TTTTGGTTACACTTACTACT---AGACACTTATTTTCTTTTCTTT-CGTAATATCGTAAT-------TGAGTAAT--TA-T------------------TTTGGTTAACTTTT---------------------------------TGCTATAGCTTATAGCGTATCGTAATCGTTATCGCTATCGTTATCGTTACCGTTATTACCGT-TA-TCGTATATCGTAGCGTTTAC---------------G----------------TAGGTCT-------------------ATACGCTTCTATCT---GGCTA	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
..........GCCCAGTATCGATGATTCTGAGGAATTCCAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................	31	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4
.................ATCGATGATTCTGAGGAATTCCACCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	3.00	3	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................ATTCTGAGGAATTCCACCTCACAGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......CTGTGCCCAGTATCGATGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................GATTCTGAGGAATTCCACCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................GATGATTCTGAGGAATTCCACCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............GTATCGATGATTCTGAGGAATTCCACCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
........GTGCCCAGTATCGATGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
...................CGATGATTCTGAGGAATTCCA................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................ATCGATGATTCTGAGGAATTCCA................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................GATTCTGAGGAATTCCACCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................	20	2	0.50	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................TATCGTTATCGTTACCGTTATC.............................................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................TTGGTTAACTTTT---------------------------------TT....................................................................................................................................................................	15	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0

droMoj3

AGGTCACTGTGCCCAGTATCGATGATTCTGAGGAATTCATCCTCACCGATGTAATTGTGCA------A-AAA-GTTTTTAC--T-------------TTATTT----------GTTCT-TTTTTATTGTATTT--T--TAC--------T-----------------------TACTACT---AGAC---------------TTTACGTATTATCGTAATT------GAAGTAAT--TT-ATATA--------------------------ATT----T-------TTTTTTTCAATTTAACTCTTTGCCATA--------------GCTAT------------------CGTTATCGTTAT---CGTTTA-TCGTATATCGTAGCGTTTAC---------------GTAGGCCAAAGACAGATAC--------------------GTCTACACGCT------------TTA	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
.......................GATTCTGAGGAATTCATCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
.GGTCACTGTGCCCAGTATCGATGATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
...............GTATCGATGATTCTGAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
....CACTGTGCCCAGTATCGATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
......CTGTGCCCAGTATCGATGATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
.......................GATTCTGAGGAATTCATCCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0
....CACTGTGCCCAGTATCGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................GTATTATCGTAATT------GAAGTA...............................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1
....CACTGTGCCCAGTATCGATGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
.........................TTCTGAGGAATTCATCCTCACCGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................CGTTTAC---------------GTAGGCCAAAGACAG..................................................	22	1	1.00	1	1	0	0	0	0	0
......CTGTGCCCAGTATCGATGATTCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
...........CCCAGTATCGATGATTCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................GTAGGCCAAAGACAGATAC--------------------..........................	19	1	1.00	1	0	0	0	0	1	0
........GTGCCCAGTATCGATGATTCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
..GTCACTGTGCCCAGTATCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	2	0.50	1	0	0	1	0	0	0
AGGTCACTGTGCCCAGTATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	2	0.50	1	1	0	0	0	0	0

droGri2

AGGTTACTGTGCCCAGTATCGATGATAATGAGGAAATGAACCTCACAGATGTAATTGTCCC------A--CA-TATTAGAT--A-------------CAAAA---CGTTTTTCA-------TTAATTGTTTTTATTG----------------------TATTTGGTTACACTTACTACT---CGAC---------------TTT-CGTAATATCTT-------AATTGAGTAAT--T--------------------ATTTGGTTAACTCTAT----AATCAATTTTTTA-------------TTTGCT--AGCTTCTAGCGTATCGTAATCGTTATCGCTAACGCTATCGTTATCGTTAT---CGTATACTCGTATATCGTAGCGTTTAC---------------G----------------TAGGCCA-CACAAAACACACTCGTCTAT-CGCTT-TAAAT---GGCTA	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
....................GATGATAATGAGGAAATGAACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1

dsi_21034

2l:16338175-16338324 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-13.8	-13.8	-13.7