ID:

dsi_21024

 Coordinate:

3r:693265-693414 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.8 -14.8 -14.4 -14.4

Flybase annnotation

CDS [3r_693415_694680_+]; exon [3r_693415_694680_+]; intron [3r_679001_693414_+]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TGAAATAGTTTGTTAATCATTTGCTTAAGTTATTACTGTTAGTCTACTTTAATGTTATTTTTTTAAATACTTAGTTTTTGCACTTGATATTTACAAAAAATGCGTCCATTTTGCTCTTTCTGTTTTTAGCCGATGACTAAAATCATTGACTTTTTTATGATTGACTTTATTTTTATTTCCTGTTTTTGTTTTATTGATAGATGGGTACTATGGAATAAATGGAAACATGTCGCTGGACAGGCGTGGTGAA
**************************************************..........................((..((...((((...(((..(((((............((..((.......((.((((((......)))))).)).......))..)).........)))))..)))...))))....))..))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
 M024
male body		 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 M025
embryo
 SRR902008
ovaries
 SRR902009
testis
............................................................................................................................................................................................................GTACTATGGAATAAATGGAAACATGT.................... 26 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0
.............................................................................................................................................................................................................................GAAACATGTCGCTGGACAGGCGTG..... 24 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
.....................................................................................................................................................................................................CAGATGGGTACTATGGAAT.................................. 19 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................ATGTCGCTGGACAGGCGTGGT... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................TTTACTGTTAGTCTACTTTAA...................................................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................TGGAAACATGTCGCTGGACAGGC........ 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................TTCCTGTTTTTGTTTTATTGATAGA................................................. 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................GGAAACATGTCGCTGGACAGGCGTG..... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................AATCATAGACTTTTTTACG........................................................................................... 19 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................................TCTTTTTTTAGCCGATGACTA............................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0
...........................................................................................................................................................................................................................TGGAAACATGTCGCTGGACAGG......... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................AAACATGTCGCTGGACAGGCGT...... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................AAACATGTCGCTGGACAGGCGTG..... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................TGATATTTACAAAAAATGCGTCA............................................................................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0
...................................................................................................................................................GACTTTTTTATGATTGACTTT.................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................TTTGCTTAAGTTATTACTGTTAGTCTACT.......................................................................................................................................................................................................... 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................GAAACATGTCGCTGGACAGGCGT...... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................TACTGTTGGTCTCCTTTTAT..................................................................................................................................................................................................... 20 3 11 0.18 2 0 1 0 0 0 0 0 0 0 1
.............................................................................................................................................................................................................TGTTGTGGAATAAATGGAAACA....................... 22 3 8 0.13 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................TGATCGGCTTTATTTTTAT.......................................................................... 19 2 8 0.13 1 0 0 0 0 0 0 1 0 0 0
.................................................................................................................................................................................................TTGAGAGATGAGTAGTATGG..................................... 20 3 8 0.13 1 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

ACTTTATCAAACAATTAGTAAACGAATTCAATAATGACAATCAGATGAAATTACAATAAAAAAATTTATGAATCAAAAACGTGAACTATAAATGTTTTTTACGCAGGTAAAACGAGAAAGACAAAAATCGGCTACTGATTTTAGTAACTGAAAAAATACTAACTGAAATAAAAATAAAGGACAAAAACAAAATAACTATCTACCCATGATACCTTATTTACCTTTGTACAGCGACCTGTCCGCACCACTT
**************************************************..........................((..((...((((...(((..(((((............((..((.......((.((((((......)))))).)).......))..)).........)))))..)))...))))....))..))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
...................................................................................................TACGCAGGTAAAACGAGTAAGAAAAAAAT.......................................................................................................................... 29 2 1 2.00 2 2 0 0 0 0
...........................................................................................................TAAAACGAGAAAGAC................................................................................................................................ 15 0 1 1.00 1 0 0 1 0 0
..............................................................................................................................................AGTAACTGAAAAAATACTAACTGAAAT................................................................................. 27 0 1 1.00 1 0 1 0 0 0
................................AATGACAACCAGAGGAAAATA..................................................................................................................................................................................................... 21 3 6 0.17 1 1 0 0 0 0
.....................................................................................................................................ACGGATATTAGTAACTG.................................................................................................... 17 2 10 0.10 1 0 0 0 1 0
.......................................................................................................................................................AGAAACACTAGCTGAAATA................................................................................ 19 3 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:693215-693464 + dsi_21024 TGAAA---------------------------T-AGTTT--GT-TAAT------------------------------------------------------------------------------------------------------------------CATTTGCTTAAGTTAT-------------------TACTGTTAGTCTACTTTAATGTTATTTTTTTA---------------------------A------------------A-TACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTTTTTGCACTTGATATTTA-CAAAAAATGCGTCCATTTTGCTCTTTCTGTTTTTAGCCGATGACTAA-----------------AA---TCATT--------------------------------GA-----C-TTTTTTATGATTGACTTTATTTT-T----ATT--------------TCCTGTTTTTGTTTTATTGATAGATGGGTACTATGGAATAAATGGAAACATGTCGCTGGACAGGCGTGGTGAA
droSec2 scaffold_6:865634-865882 + TGAAA---------------------------T-AGTTT--GT-TAAT------------------------------------------------------------------------------------------------------------------CATTTGCTTAATTTTT-------------------TACTGTTAGTCTACTTTAATGTTATTTTTTTA---------------------------A------------------A-TACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTTTTTGCACTTAATATTTAACAAAAAATGCGTCCATTTTGCTCTTTCTGTTTTTAGCCCATGACTAAA----------------AA---TCATT--------------------------------GA-----C-TTTTTTATGATTGACTTTA-TTT-T----ATT--------------TCCT-GTTTTGTTTTA-TGATAGATGGGTACTATGGAATAAATGGAAACATGTCGCTGGACAGGCGTGGTGAA
dm3 chr3R:766141-766446 + TTAAA---------------------------T-AGTTT--GT-TATTTA--------------------------------------------------------------------------------------------------------------GTTATTTATTTAAGTTTT-------------------TACTGTTAGTCTACTTTAATGTTATGT-------------------------------T--AGCCTTAACCAT----------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTGTC-------------------------GCACTACTTTTTCTTCGATTTCGGTCTAGTATA-T--------------------------------------------TATTTATGCTTAAAGCTTTGCACTTGATGACTG-------------------------------------------------------------------------------------------------------------------------------------------AAATAATGCGTGCCTTTTGCTTTTTCTGATTTTAACCGATGCCTAA-----------------AA---TCGTT--------------------------------GA-----C-T-TTTTATGATTGAA-TTATTTT-G----ATT--------------TCCTGTTTTTGTTTTTTTAATAGATGGGTACTATGGAATAAATGGAAATATGTCGTTGGACAGGCGCGGTGAA
droEre2 scaffold_4770:1064578-1064940 + TGTAA---------------------------T-ATTTAAACA-C----------------------------------------------------AA------T-------------T----------------------------------------CTTATTTATTCATGTTTT-------------------TATTGTTG-----ATGCAATGTTAATTTCTTA---------------------------A------------------A-TACTTGGCTTGTAA-------------------TGTAATGA--GT---A-------------CACATA--------------------AATTTTGGAATACCTTCGTGATGCAGCAAAAAAAATTGATTTACAAATACATCCAATAAAATTTGGAGATAATCTAAATAATCTACTATGCTAATC---------------------------------------------------------------------------TACTTGTGCTTAAAGTTTTGCGTTTGGTGATTGAATATTTT------------------------------------------------------------------ATG------TATTGAATAT--------------------------------------------------------------------------------------------------------------A---TTATT--------------------------------GAATATAT-TATTTTATGATTGA--ATATTTT-G----ATT--------TTCA--T-TCTTTTTTGTTTCATTATTAGATGGGTACTATGGCATCAATGGAAATATGTCTTTGGACAGGCGTGGTGAA
droYak3 3R:1091481-1091774 + ATTAA---------------------------T-AAATA--CA-T----------------------------------------------------ATTTTTTATTTCATTTTTT-GTT-----------A--TTATTT----------------------------------------------------------------------ATGTAATGATAATTTCTTATATACTTAGCCACTTA---ATTTCTTAA-----------A--------TACTTAGCTTATTA-------------------AGTAATGA--GTT--A-------------AAGATAAAACAGTCTGTAAACTGTAAAAATTTGGAATATCTTCGTGCTATAGGAAAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA---------------------------------------------------------------------------------------------------------TTAAGCCTAA-----------------AA---TCATT--------------------------------GA-----A-T-TTTTATGATTAAA-TTATTTT-G----ATA--------------TTTCTTTTTTGTTTCATTATTAGATGGGTACTATGGCATAAATGGAAATATGTCGTTGGACAGGCGTGGTGAA
droEug1 scf7180000409759:716479-716710 + TTAAA---------------------------ATAATTT--AA-AAA------------CCTTTCAAAGTCAACGTAATGCAACTCTGCTTTACTATA----TTATTTTAGTATTT-GAG-----------A--TTATTAATTTAAATG------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--GAT--TCTTAGAT--------AATATTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTTA-ATAGTTTT----------------------------------------------------TCTCG-------------------------------------------------------------------------------AT-TT------GT-TTTTATCATTTCA-TTATTTT-G----ATT--------------TGTATAATTTATTCCGTTTTTAGATGTCTACCATGGCATAAATGGGAATATGTCGTTGGACAGGCGTGGCGAG
droBia1 scf7180000302411:516929-517217 + TTAAG---------------------------T-AAGTT--AT-TTAT------------------------------------------------------------------------------------------------------------------AATTTGGTTCAATTTA-------------------GAAATTTAGTCTTCAGAAG--TAGTTT-------------------------------T--AATTTTAAATAT----------------------------------------------------------------------------------------------------------------------------------------------------------AATTTGTT-------------------------ATCT-----------------TGCTTTCAGGC---AAGAACTGGTACTGTTTTAACCTTACGTTTTCTATGTGTAAATG--------------------------------------------------------------------------------------------------------TATATG------TATTCTATATTTG-ATTGTTTT--TCAAAAAT---------------------------------------------------------------------------------------ATGTT---CC-CATTCTA---------------------GT-CA-----T-T-TTTTATCATTTCA-TTATTTTTT----ATT--------------TTC--GTTTTGTTTAATTTTTAGATGTCTACCATGGTATAAATGGCAATATGTCGTTAGACAGGCGAGGTGAG
droTak1 scf7180000415789:463492-463810 + TAAGACTTAGTTTGTACTTTGAATATTTTAAGT-AAGT---------------------------------------------------------------------------------T----------------------------------------ATTATTTATTTAAGTTTCTACATATTTAATAGTTCCATTACTT--------------------------------TACTTACTTTCACATTGTTTAAATAATTA-----------A-GACT----------------------------------------------------------------------------------------------------------------------------------------------TAGTTTGTA------------------------------------------------------------------------------------------------------------------------------------CTTTGAATATTTTAAGTAAGTTATTATTTATTTAAGTTTCTACATGTTTAATAGTACCAATTGTTAAAAAAAAAAC-----------------------AAAACTTAATT----------------------------------------------------TCTTA-------------------------------------------------------------------------------TC-TT------GA-TTTTATCATTTCC-CTATTTT-G----ATT--------------TCCTTAATTTGTTTCTTTTTTAGATGTTTACCATGGCATAAATGGAAATATGTCGTTGGACAGGCGGGGTGAG
droEle1 scf7180000491104:2560326-2560544 + ATTAT---------------------------A-AGTTA-------AC------------------------------------------------------------------------------------------------------------------CATTTTATACAAAAAT-------------------AATTATAAGTTTATTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTTAAGGT---AAATACAAAAGTCACT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGTTTTATATTT------------------------------------------TACTT---ATGAAGCGAGGTCTAG-------TT---TTGTACGTT------------------------TTATAA-----A-TTTGTAATGTTTAATTT-------T----GCT--------------TACATTACTTGTTACTTTTGTAGATGTCTACCATGGCATAAACGGAAATATGTCGCTGGATAGGCGCGGTGAG
droRho1 scf7180000772422:3641-4013 - TTTAA---------------------------G-GTATTT-ATTTATT-A---ATGCA-------------------GACAT--------------CA---------TTAGTTTA--GAT-----------A--TTCTTGTGTGTA-----------------------------------------------------------------------------TTTATA---------------------------T-----------A--------TACATAGCATTTTA-------------------A--AATTA--CTTAAA-------------AAGTTAAAACATTTTTATAATATTTGAAATTAAGATTAATTT-----------------------------------------------TTTAATTACAAGAAATAAGTTAATTTAATAAACTAATTATAATTTTATTTTGAGTTAAGATACA--------------------------------------------CATATACGCTTAT---------------------------CAATTAGGT------------------------------------------------------------------------------TG-ATTTTTTT--TTACAAAT---------------------------------------------------------------------------------------TTCTC---CA-AATTT-AATTTTAAAGAAAGCGAATTTGTT-TT------TT-TTTTATTATTTTA-TTCTTTT-G----ATT--------------TTCATTACTTCTTATTTTTATAGATCTCTACCATGGCATAAATGGAAATATGTCGCTGGACAGGCGCGGTGAA
droFic1 scf7180000453850:119335-119555 + TAATGTTT------------------------A-AA-----CA-----------------------------------------------------TA----CCAGCTTAGTTTAT-GTTTAATATATTATATGGTATTTCGTTAAAC-------------------CATTAAGTTAT-------------------TA---------------------------------------------------------------------------------------------------------------AGTAATCT--GTT--AGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---------------------------------------------------------------------------------------------------------------------------------------------------TTTTT-----------------AGTGGCTTAAAAAATTTATGTT---TT-CA---------------------------C-TT------TA-TTTTATTGGTTCG-TTATTTT-G----ACT--------------TTCTTCATATGATTTATTCCCAGAAGTATACCACGGCATAAATGGAAATATGTCGCTGGACAGGCGCGGTGAG
droKik1 scf7180000302634:465917-466178 + TTAAT---------------------------T-ATTTT--A----AT------------------------------------------------------------------------------------------------------------------CATTTTATTAGCT--A-------------------CAATGTAAGCTTAATTTAATTTTAATTA--------------------------------------------GTTTAAGTTGATTAGCTTTTCATTAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTAATATGTAACCAGAAATATTTA--T---------------TTTATTC---AACTAAAGTGCTTTAATTTATTTAATAT---TT-CTC------------------------TATTTA-----A-T-TTGTTTTATTTAA-TTATTTT-G----ATT--------TCCC--TTCATTTTTTCTGCCTTTTTCAGATGTCTACCATGGCATCAATGGCAATATGTCCCTAGACCGGCGCGGTGAG
droAna3 scaffold_13340:22977569-22977769 + TCAAG---------------------------T-TTATT--AT-TACA------------------------------------------------TA------------------------------------------------------------------TTAGTTTAGGTTAT-------------------TATT--------------------------------------------------------------------------------------------AGGTTATTATTTCAAAAAGGAATAT--GTT--TCGTATAC--------TTTTTTCCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTAAATATTGTTTTCTTA-----------------------------------------------------------------------------------------------------------------------------------T-TT------AT-TTTTATAATT--------TTG-G----ATT--------TTTT--T-TTATTTTTGTTGACATTTCAGATGTTTACCATGGCATCAATGGAAACATGTCGCTGGACAGGCGCGGTGAG
droBip1 scf7180000396424:1245381-1245587 + TAT---------------------------------TTA--GT-TAAA------------------------------------------------------------------------------------------------------------------TATTTGTATGATATAT-------------------AAG------------------------TTCTA---------------------------A------------------A-CATT------------AAGTTGTTGTTTTAAAAGGAAATAATTTCT--TTGTATACCTTTTTACTTCTTAACTATTTT-----------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTA-----------------------------------------------------------------------------------------------------------------------------------T-TC------AT-TTCTTTAAT----TT-T-TTC-C----ATT--------ATTA--T-T-TTTTTTCTGGACATTTCAGATGTTTACCATGGCATCAATGGAAACATGTCGCTGGACAGGCGCGGTGAG
dp5 2:22026540-22026755 - AGGAA---------------------------C-AATAT--TT-TAGTTAAATTCAA------------------------------------------------TTTTAGTTAAT-GAC-----------A--TTCTTGAGTTAAATATTTCAAGTTAAGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTTAATTTTTAACAGTTTG-----------------------------------------------------------------------------------------------------------------------------CTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGCTTCATTTGATTC-----------------------------------------------------------------------------------------------------------------------------------A-TT------AG-GTTTATGATTTCA-TTATTTT-T----ATG--------------TTCCTCTTTTGATTGATTTTCAGATGTCTATCACGGAATCAATGGCAACATGTCGCTGGATAGACGTGGGGAG
droPer2 scaffold_3:4808017-4808213 - GGGAA---------------------------C-AATAT--TT-TAGTTAAATTCAA------------------------------------------------TTTTAGTTAAT-GAC-----------A--TTCTTGAGTTAAATATTTCAAGTTAAGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTTAATTTTTAACAGTTTT-----------------------------------------------------------------------------------------------------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TT------AG-GCTTATGATTTCA-TTATTTT-T----ATG--------------TTCCTCTTTTGATTGATTTTCAGATGTCTATCACGGAATCAATGGCAACATGTCGCTGGATAGACGTGGGGAG
droWil2 scf2_1100000004958:765478-765659 + TATAA---------------------------T-AGATA--TA-TTATCAAA----------------------------------------------------------------------------------------------------------------TTTATTTATGCTAT-------------------TATCGAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--------------------------------------------------------------------------------------------------------TACGTA------TGTACATAGTATG-TGTTTTTT--TCAATATTTTTTTTTTGTACTATGTTTTTA-GTAAGAGCGC--------TACATTTTTTTTTTTTGAATAAAACATAA-----------------AC---GGTTT--------------------------------GA-----C-T--TTTTTAACTAATTT-T-TTT-T----ATT--------------ATCGATTTT----------------------------------------------------------------
droVir3 scaffold_12855:8539595-8539832 + TAAAA---------------------------T-GGTTT--CT-TATT-AATTTTATATTTATTATAAATTTACGCTTTCCACC------------------------C----------------------A--TTTTCCGATCATATATTT-------------------------------------------TATAGA--------------------------------TCTTGTAATTTA---ATTTTTTAT-----------A--------AATTTAATTA-TAA-------------------ATTATT----------------TTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTCA-----------------AT---TCATT--------------------------------TA-----A-T-TTTTTAAATTAATTTTC-TTT-T----GTA------------TTTTCTCTTACTTTGGGCTTTCCAGATGTCTACCATGGCATCAATGGCAACATGTCGCTGGATAGACGCGGTGAG
droMoj3 scaffold_6540:23738775-23738951 + TTAAG---------------------------T-TATTT--AT-TATT-A---TTGTA---------------------------------------------------------------------------------------------------------------TTAGT--------TAATCAACCGATTTATAAATT--------------------------------TTGTAAGTTACAAATAGTTTT--TAATTTT----------------------------------------------------------------------------------------------------------------------------------------------------------AATTAAATTTGTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAATTT-T-T---T----GTA--------------TTA--ATTTTTTGCGCTTTTCAGATGTTTACCACGGCATCAATGGCAATATGTCGTTGGATAGGCGGGGTGAA
droGri2 scaffold_15074:5121597-5121828 + ATTAT---------------------------T-CGCTT--AT-TAGTTAATTGTAA--TTATTTTAAATCTA------------------------------------------TAATT-----------A--TTTTTGTATAGAATGTATTAATTAATTACT------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTACTAAATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATACATATTCATT-----GATATT-ATGGTTTT--TCTT-----------------------------------------------------------------------------------------------------------------------------------T-TA------AT-TGTTCTAATT--------TTT-GTTTGACATTTTTCTTTTCATTTGCGGTTGCTTGGGGCATTGCAGATGTATACCACGGCATCAATGGCAACATGTCGCTGGATAGACGCGGTGAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TGAAA---------------------------T-AGTTT--GT-TAAT------------------------------------------------------------------------------------------------------------------CATTTGCTTAAGTTAT-------------------TACTGTTAGTCTACTTTAATGTTATTTTTTTA---------------------------A------------------A-TACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTTTTTGCACTTGATATTTA-CAAAAAATGCGTCCATTTTGCTCTTTCTGTTTTTAGCCGATGACTAA-----------------AA---TCATT--------------------------------GA-----C-TTTTTTATGATTGACTTTATTTT-T----ATT--------------TCCTGTTTTTGTTTTATTGATAGATGGGTACTATGGAATAAATGGAAACATGTCGCTGGACAGGCGTGGTGAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTATGGAATAAATGGAAACATGT....................2612.00200000000002000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACATGTCGCTGGACAGGCGTG.....2411.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCGCTGGACAGGCGTGGT...2111.00100010000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAAACATGTCGCTGGACAGGC........2311.00100000010000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------------TCCTGTTTTTGTTTTATTGATAGA.................................................2511.00100000000100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAACATGTCGCTGGACAGGCGTG.....2511.00101000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAAACATGTCGCTGGACAGG.........2211.00100000010000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACATGTCGCTGGACAGGCGT......2211.00101000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACATGTCGCTGGACAGGCGTG.....2311.00100010000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATATTTA-CAAAAAATGCGTCA............................................................................................................................................................................................................................2311.00100000000010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA-----C-TTTTTTATGATTGACTTT.....................................................................................................2111.00100010000000000000
....................................................................................................................................................................TTTGCTTAAGTTAT-------------------TACTGTTAGTCTACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000000100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACATGTCGCTGGACAGGCGT......2311.00100010000000000000
droSec2
TGAAA---------------------------T-AGTTT--GT-TAAT------------------------------------------------------------------------------------------------------------------CATTTGCTTAATTTTT-------------------TACTGTTAGTCTACTTTAATGTTATTTTTTTA---------------------------A------------------A-TACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTTTTTGCACTTAATATTTAACAAAAAATGCGTCCATTTTGCTCTTTCTGTTTTTAGCCCATGACTAAA----------------AA---TCATT--------------------------------GA-----C-TTTTTTATGATTGACTTTA-TTT-T----ATT--------------TCCT-GTTTTGTTTTA-TGATAGATGGGTACTATGGAATAAATGGAAACATGTCGCTGGACAGGCGTGGTGAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATGTCGCTGGACAGGCGT......2113.0030120
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGTACTATGGAATAAATGGAAAC........................2612.0020020
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACATGTCGCTGGACAGGC........2011.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCGCTGGACAGGCGTGGT...2211.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAAACATGTCGCTGGACAGGCGTG.....2711.0010100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCGCTGGACAGGCGTGGT...2111.0010100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGAAACATGTCGCTGGACAGGCGT......2811.0010100
dm3
TTAAA---------------------------T-AGTTT--GT-TATTTA--------------------------------------------------------------------------------------------------------------GTTATTTATTTAAGTTTT-------------------TACTGTTAGTCTACTTTAATGTTATGT-------------------------------T--AGCCTTAACCAT----------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTGTC-------------------------GCACTACTTTTTCTTCGATTTCGGTCTAGTATA-T--------------------------------------------TATTTATGCTTAAAGCTTTGCACTTGATGACTG-------------------------------------------------------------------------------------------------------------------------------------------AAATAATGCGTGCCTTTTGCTTTTTCTGATTTTAACCGATGCCTAA-----------------AA---TCGTT--------------------------------GA-----C-T-TTTTATGATTGAA-TTATTTT-G----ATT--------------TCCTGTTTTTGTTTTTTTAATAGATGGGTACTATGGAATAAATGGAAATATGTCGTTGGACAGGCGCGGTGAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGCTTTGCACTTGATGACTG-------------------------------------------------------------------------------------------------------------------------------------------A........................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGTCGTTGGACAGGCGCGGT...2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000100000000000000000000000000000000010000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTCGTTGGACAGGCGCGG....2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCGTTGGACAGGCGCGGT...2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000010000000000000000001000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATGTCGTTGGACAGGCGC......2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATGGAAATATGTCGTTGGACAGGC........2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGAAATATGTCGTT................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAAATATGTCGTTGGACAGGC........2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATGTCGTTGGACAGGCGCG.....2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATGGAAATATGTCGTTGG..............2112.0020000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G----ATT--------------TCCTGTTTTTGTTTTT.........................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGAAATATGTCGTTGGACAGGCGC......2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000001000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAATGGAAATATGTCGTTGGACAGGCATC.....3111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................AAGTTTT-------------------TACTGTTAGTCTAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGATGCCTAA-----------------AA---TCGTT--------------------------------GA-----C-T-.....................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTGATTTTAACCGATGCCTAA-----------------AA---AAA..................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTACTATGGAATAAATGGAAATA.......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
........................................................................................................................................................................................................................................................................AACCAT----------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTGTC-------------------------GCACTACTTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATAAATGGAAATATGTCGTTGGA.............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAAATATGTCGTTGGACAGGCGC......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGATTTCGGTCTAGTATA-..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATGGAAATATGTCGTTGGACAGGCGC......2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGTACTATGGAATAAATGGA...........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCCTAA-----------------AA---TCGTT--------------------------------GA-----C-T-T....................................................................................................................2111.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGAAATATGTCGTTGGACAGGCGC......2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATGTCGTTGGACAGGCG.......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGTATA-T--------------------------------------------TATTTATGCTTAAAGCTTA..................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAAATGGAAATATGTCGTT................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTTAAAGCTTTGCACTTGATGACTG-------------------------------------------------------------------------------------------------------------------------------------------.........................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................TTTAATGTTATGT-------------------------------T--AGCCTTAACCAT----------------------------------------------------------------------------------------------------------------------------------------------------------T....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGTTGGACAGGCGCGGT...1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---TCGTT--------------------------------GA-----C-T-TTTTATGATTGAA-T......................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................TTAACCAT----------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTGTC-------------------------GCACTACTTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGTCGTTGGACAGGCGC......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.....................................................................................................................................................................................................TACTGTTAGTCTACTTTAATGTTATGT-------------------------------T--A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTATGCTTAAAGCTTTGCAC..............................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTACTATGGAATAAATGG............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATGTCGTTGGACAGGCGCATC...2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAATAGATGGGTACTATGG.....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAACCGATGCCTAA-----------------AA---TCGTT--------------------------------GA-----C-T-.....................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------------------------------GA-----C-T-TTTTATGATTGAA-TTATTTT-G----A.........................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATGTCGTTGGACAGGCGCGGTGA.2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATT--------------TCCTGTTTTTGTTTTTTT.......................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAGCTTTGCACTTGATGACTG-------------------------------------------------------------------------------------------------------------------------------------------AC.......................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGACAGGCGCGGTGA.1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAAATATGTCGTTGGACAGG.........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTCGTTGGACAGGCG.......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TTTTATGATTGAA-TTATTTT-G----ATT--------------.........................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAA-TTATTTT-G----ATT--------------TCCTGTTT.................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTCGTTGGACAGGC........1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAAATATGTCGTTGGACA...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGGAATAAATGGAAATATGTCGTT................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAATAAATGGAAATATG.....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATGTCGTTGGACAGGCGCGGT...2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGAAATATGTCGTTGGACAGGC........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCGTTGGACAGGCGCGG....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGAAATATGTCGTTG...............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................AT----------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTGTC-------------------------GCACTACTAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
droEre2
TGTAA---------------------------T-ATTTAAACA-C----------------------------------------------------AA------T-------------T----------------------------------------CTTATTTATTCATGTTTT-------------------TATTGTTG-----ATGCAATGTTAATTTCTTA---------------------------A------------------A-TACTTGGCTTGTAA-------------------TGTAATGA--GT---A-------------CACATA--------------------AATTTTGGAATACCTTCGTGATGCAGCAAAAAAAATTGATTTACAAATACATCCAATAAAATTTGGAGATAATCTAAATAATCTACTATGCTAATC---------------------------------------------------------------------------TACTTGTGCTTAAAGTTTTGCGTTTGGTGATTGAATATTTT------------------------------------------------------------------ATG------TATTGAATAT--------------------------------------------------------------------------------------------------------------A---TTATT--------------------------------GAATATAT-TATTTTATGATTGA--ATATTTT-G----ATT--------TTCA--T-TCTTTTTTGTTTCATTATTAGATGGGTACTATGGCATCAATGGAAATATGTCTTTGGACAGGCGTGGTGAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTTGGACAGGCGTGGT...1911.0010000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTTTGGACAGGCGTG.....1811.0011000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATCAATGGAAATATGT....................1911.0010000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATGTCTTTGGACAGGCGTGGT...2411.0010000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAATGGAAATATGTCTTTGGACA...........2511.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................AATTTTGGAATACCTTCGTGATGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATGTCTTTGGACAGGCGTGG....2311.0010000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTATGGCATCAATGGAAATATGT....................2611.0010001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATATGTCTTTGGACAGGCGT......2311.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATGGAAATATGTCTTTGGACAGGC........2611.0010000010
droYak3
ATTAA---------------------------T-AAATA--CA-T----------------------------------------------------ATTTTTTATTTCATTTTTT-GTT-----------A--TTATTT----------------------------------------------------------------------ATGTAATGATAATTTCTTATATACTTAGCCACTTA---ATTTCTTAA-----------A--------TACTTAGCTTATTA-------------------AGTAATGA--GTT--A-------------AAGATAAAACAGTCTGTAAACTGTAAAAATTTGGAATATCTTCGTGCTATAGGAAAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA---------------------------------------------------------------------------------------------------------TTAAGCCTAA-----------------AA---TCATT--------------------------------GA-----A-T-TTTTATGATTAAA-TTATTTT-G----ATA--------------TTTCTTTTTTGTTTCATTATTAGATGGGTACTATGGCATAAATGGAAATATGTCGTTGGACAGGCGTGGTGAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAATGGAAATATGTCGTTGGACAGGC........2825.501100100070003
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAAATATGTCGTTGGACAGGC........2421.00201000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGTCGTTGGACAGGCGT......2021.00201000010000
............................................................................................................................................................................................................................................................................................................................................................................................TCGTGCTATAGGAAAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA---------------------------------------------------------------------------------------------------------TTAAGCC..............................................................................................................................................................................................2811.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTATGGCATAAATGGAAATATGTCGT.................2720.50101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATGTCGTTGGACAGGCGTGGT...2420.50100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAATGGAAATATGTCGTT................2020.50100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGAAATATGTCGTTGGACAGGC........2520.50100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATATGTCGTTGGACAGGC........2120.50100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAATGGAAATATGTCGTTGGACAGGCGT......3020.50100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCATAAATGGAAATATGTCGTT................2520.50101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAAATATGTCGTTGGACAGGCGT......2620.50101000000000
droEug1
TTAAA---------------------------ATAATTT--AA-AAA------------CCTTTCAAAGTCAACGTAATGCAACTCTGCTTTACTATA----TTATTTTAGTATTT-GAG-----------A--TTATTAATTTAAATG------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--GAT--TCTTAGAT--------AATATTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTTA-ATAGTTTT----------------------------------------------------TCTCG-------------------------------------------------------------------------------AT-TT------GT-TTTTATCATTTCA-TTATTTT-G----ATT--------------TGTATAATTTATTCCGTTTTTAGATGTCTACCATGGCATAAATGGGAATATGTCGTTGGACAGGCGTGGCGAGSizeHit CountTotal NormTotal
No Reads
droBia1
TTAAG---------------------------T-AAGTT--AT-TTAT------------------------------------------------------------------------------------------------------------------AATTTGGTTCAATTTA-------------------GAAATTTAGTCTTCAGAAG--TAGTTT-------------------------------T--AATTTTAAATAT----------------------------------------------------------------------------------------------------------------------------------------------------------AATTTGTT-------------------------ATCT-----------------TGCTTTCAGGC---AAGAACTGGTACTGTTTTAACCTTACGTTTTCTATGTGTAAATG--------------------------------------------------------------------------------------------------------TATATG------TATTCTATATTTG-ATTGTTTT--TCAAAAAT---------------------------------------------------------------------------------------ATGTT---CC-CATTCTA---------------------GT-CA-----T-T-TTTTATCATTTCA-TTATTTTTT----ATT--------------TTC--GTTTTGTTTAATTTTTAGATGTCTACCATGGTATAAATGGCAATATGTCGTTAGACAGGCGAGGTGAGSizeHit CountTotal NormTotal
No Reads
droTak1
TAAGACTTAGTTTGTACTTTGAATATTTTAAGT-AAGT---------------------------------------------------------------------------------T----------------------------------------ATTATTTATTTAAGTTTCTACATATTTAATAGTTCCATTACTT--------------------------------TACTTACTTTCACATTGTTTAAATAATTA-----------A-GACT----------------------------------------------------------------------------------------------------------------------------------------------TAGTTTGTA------------------------------------------------------------------------------------------------------------------------------------CTTTGAATATTTTAAGTAAGTTATTATTTATTTAAGTTTCTACATGTTTAATAGTACCAATTGTTAAAAAAAAAAC-----------------------AAAACTTAATT----------------------------------------------------TCTTA-------------------------------------------------------------------------------TC-TT------GA-TTTTATCATTTCC-CTATTTT-G----ATT--------------TCCTTAATTTGTTTCTTTTTTAGATGTTTACCATGGCATAAATGGAAATATGTCGTTGGACAGGCGGGGTGAGSizeHit CountTotal NormTotal
No Reads
droEle1
ATTAT---------------------------A-AGTTA-------AC------------------------------------------------------------------------------------------------------------------CATTTTATACAAAAAT-------------------AATTATAAGTTTATTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTTAAGGT---AAATACAAAAGTCACT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGTTTTATATTT------------------------------------------TACTT---ATGAAGCGAGGTCTAG-------TT---TTGTACGTT------------------------TTATAA-----A-TTTGTAATGTTTAATTT-------T----GCT--------------TACATTACTTGTTACTTTTGTAGATGTCTACCATGGCATAAACGGAAATATGTCGCTGGATAGGCGCGGTGAGSizeHit CountTotal NormTotal
No Reads
droRho1
TTTAA---------------------------G-GTATTT-ATTTATT-A---ATGCA-------------------GACAT--------------CA---------TTAGTTTA--GAT-----------A--TTCTTGTGTGTA-----------------------------------------------------------------------------TTTATA---------------------------T-----------A--------TACATAGCATTTTA-------------------A--AATTA--CTTAAA-------------AAGTTAAAACATTTTTATAATATTTGAAATTAAGATTAATTT-----------------------------------------------TTTAATTACAAGAAATAAGTTAATTTAATAAACTAATTATAATTTTATTTTGAGTTAAGATACA--------------------------------------------CATATACGCTTAT---------------------------CAATTAGGT------------------------------------------------------------------------------TG-ATTTTTTT--TTACAAAT---------------------------------------------------------------------------------------TTCTC---CA-AATTT-AATTTTAAAGAAAGCGAATTTGTT-TT------TT-TTTTATTATTTTA-TTCTTTT-G----ATT--------------TTCATTACTTCTTATTTTTATAGATCTCTACCATGGCATAAATGGAAATATGTCGCTGGACAGGCGCGGTGAASizeHit CountTotal NormTotal
No Reads
droFic1
TAATGTTT------------------------A-AA-----CA-----------------------------------------------------TA----CCAGCTTAGTTTAT-GTTTAATATATTATATGGTATTTCGTTAAAC-------------------CATTAAGTTAT-------------------TA---------------------------------------------------------------------------------------------------------------AGTAATCT--GTT--AGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---------------------------------------------------------------------------------------------------------------------------------------------------TTTTT-----------------AGTGGCTTAAAAAATTTATGTT---TT-CA---------------------------C-TT------TA-TTTTATTGGTTCG-TTATTTT-G----ACT--------------TTCTTCATATGATTTATTCCCAGAAGTATACCACGGCATAAATGGAAATATGTCGCTGGACAGGCGCGGTGAGSizeHit CountTotal NormTotal
No Reads
droKik1
TTAAT---------------------------T-ATTTT--A----AT------------------------------------------------------------------------------------------------------------------CATTTTATTAGCT--A-------------------CAATGTAAGCTTAATTTAATTTTAATTA--------------------------------------------GTTTAAGTTGATTAGCTTTTCATTAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTAATATGTAACCAGAAATATTTA--T---------------TTTATTC---AACTAAAGTGCTTTAATTTATTTAATAT---TT-CTC------------------------TATTTA-----A-T-TTGTTTTATTTAA-TTATTTT-G----ATT--------TCCC--TTCATTTTTTCTGCCTTTTTCAGATGTCTACCATGGCATCAATGGCAATATGTCCCTAGACCGGCGCGGTGAGSizeHit CountTotal NormTotal
No Reads
droAna3
TCAAG---------------------------T-TTATT--AT-TACA------------------------------------------------TA------------------------------------------------------------------TTAGTTTAGGTTAT-------------------TATT--------------------------------------------------------------------------------------------AGGTTATTATTTCAAAAAGGAATAT--GTT--TCGTATAC--------TTTTTTCCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTAAATATTGTTTTCTTA-----------------------------------------------------------------------------------------------------------------------------------T-TT------AT-TTTTATAATT--------TTG-G----ATT--------TTTT--T-TTATTTTTGTTGACATTTCAGATGTTTACCATGGCATCAATGGAAACATGTCGCTGGACAGGCGCGGTGAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACATGTCGCTGGACAGGCGC......2211.001001000
droBip1
TAT---------------------------------TTA--GT-TAAA------------------------------------------------------------------------------------------------------------------TATTTGTATGATATAT-------------------AAG------------------------TTCTA---------------------------A------------------A-CATT------------AAGTTGTTGTTTTAAAAGGAAATAATTTCT--TTGTATACCTTTTTACTTCTTAACTATTTT-----------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTA-----------------------------------------------------------------------------------------------------------------------------------T-TC------AT-TTCTTTAAT----TT-T-TTC-C----ATT--------ATTA--T-T-TTTTTTCTGGACATTTCAGATGTTTACCATGGCATCAATGGAAACATGTCGCTGGACAGGCGCGGTGAGSizeHit CountTotal NormTotal
No Reads
dp5
AGGAA---------------------------C-AATAT--TT-TAGTTAAATTCAA------------------------------------------------TTTTAGTTAAT-GAC-----------A--TTCTTGAGTTAAATATTTCAAGTTAAGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTTAATTTTTAACAGTTTG-----------------------------------------------------------------------------------------------------------------------------CTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGCTTCATTTGATTC-----------------------------------------------------------------------------------------------------------------------------------A-TT------AG-GTTTATGATTTCA-TTATTTT-T----ATG--------------TTCCTCTTTTGATTGATTTTCAGATGTCTATCACGGAATCAATGGCAACATGTCGCTGGATAGACGTGGGGAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCAACATGTCGCTGGATA...........2111.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGGAATCAATGGCAACA.......................1911.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAATGGCAACATGTCGCT................2111.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCTATCACGGAATCAATGGCAACAT......................2811.0010010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCTGGATAGACGTGGGGA.2011.0010000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCAACATGTCGCTGGATA...........2011.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATGGCAACATGTCGCTG...............2011.0010100000000
droPer2
GGGAA---------------------------C-AATAT--TT-TAGTTAAATTCAA------------------------------------------------TTTTAGTTAAT-GAC-----------A--TTCTTGAGTTAAATATTTCAAGTTAAGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTTAATTTTTAACAGTTTT-----------------------------------------------------------------------------------------------------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TT------AG-GCTTATGATTTCA-TTATTTT-T----ATG--------------TTCCTCTTTTGATTGATTTTCAGATGTCTATCACGGAATCAATGGCAACATGTCGCTGGATAGACGTGGGGAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATGGCAACATGTCGCTGGA.............2111.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAATGGCAACATGTCGCTGG..............2211.001001000
droWil2
TATAA---------------------------T-AGATA--TA-TTATCAAA----------------------------------------------------------------------------------------------------------------TTTATTTATGCTAT-------------------TATCGAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--------------------------------------------------------------------------------------------------------TACGTA------TGTACATAGTATG-TGTTTTTT--TCAATATTTTTTTTTTGTACTATGTTTTTA-GTAAGAGCGC--------TACATTTTTTTTTTTTGAATAAAACATAA-----------------AC---GGTTT--------------------------------GA-----C-T--TTTTTAACTAATTT-T-TTT-T----ATT--------------ATCGATTTT----------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................................................................................................TATCGAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--------------------------------------------------------------------------------------------------------TACGTA------TGTACATAGT.......................................................................................................................................................................................................................................................................................2511.00100010
.............................................................................................................................................................................GCTAT-------------------TATCGAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--------------------------------------------------------------------------------------------------------TACG.........................................................................................................................................................................................................................................................................................................18200.05101000
droVir3
TAAAA---------------------------T-GGTTT--CT-TATT-AATTTTATATTTATTATAAATTTACGCTTTCCACC------------------------C----------------------A--TTTTCCGATCATATATTT-------------------------------------------TATAGA--------------------------------TCTTGTAATTTA---ATTTTTTAT-----------A--------AATTTAATTA-TAA-------------------ATTATT----------------TTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTCA-----------------AT---TCATT--------------------------------TA-----A-T-TTTTTAAATTAATTTTC-TTT-T----GTA------------TTTTCTCTTACTTTGGGCTTTCCAGATGTCTACCATGGCATCAATGGCAACATGTCGCTGGATAGACGCGGTGAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAATGGCAACATGTCGCT................2012.002000000000000000100000000000000000000100000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATGTCGCTGGATAGACGCGGT...2311.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCAACATGTCGCTGGATA...........2111.001000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCATGGCATCAATGGCAAC........................2011.001000000000000000000000000000000000001000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGCTGGATAGACGCGGTGA.2111.001000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCAATGGCAACATGTCGC.................2111.001000000000000000000000001000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCGCTGGATAGACGCGG....2011.001000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAACATGTCGCTGGATAGAC........2211.001000000000000010000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATGGCAACATGTCGCTGG..............2111.001000000000000000000000000100000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTACCATGGCATCAATGGC...........................2111.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
TTAAG---------------------------T-TATTT--AT-TATT-A---TTGTA---------------------------------------------------------------------------------------------------------------TTAGT--------TAATCAACCGATTTATAAATT--------------------------------TTGTAAGTTACAAATAGTTTT--TAATTTT----------------------------------------------------------------------------------------------------------------------------------------------------------AATTAAATTTGTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTAATTT-T-T---T----GTA--------------TTA--ATTTTTTGCGCTTTTCAGATGTTTACCACGGCATCAATGGCAATATGTCGTTGGATAGGCGGGGTGAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTCGTTGGATAGGCGGG.....2011.001000100
droGri2
ATTAT---------------------------T-CGCTT--AT-TAGTTAATTGTAA--TTATTTTAAATCTA------------------------------------------TAATT-----------A--TTTTTGTATAGAATGTATTAATTAATTACT------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTACTAAATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATACATATTCATT-----GATATT-ATGGTTTT--TCTT-----------------------------------------------------------------------------------------------------------------------------------T-TA------AT-TGTTCTAATT--------TTT-GTTTGACATTTTTCTTTTCATTTGCGGTTGCTTGGGGCATTGCAGATGTATACCACGGCATCAATGGCAACATGTCGCTGGATAGACGCGGTGAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 02:42 PM