ID:

dsi_21003

 Coordinate:

2r:4229487-4229778 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.5 -12.0 -12.0 -11.8

Flybase annnotation

five_prime_UTR [2r_4229764_4229851_+]; exon [2r_4229764_4230015_+]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+
mature
  1. dsi_21003  2r:4229610-4229626 +
  2. node_8990:7819-7835 -
  3. node_59987:64-80 +
star
  1. dsi_21003  2r:4229704-4229718 +
  2. node_65413:1587-1601 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------#################################################################
TTAAGCTCGTTTGTTTTATAACTATCAGATTTAATAAATTTCTTTTATATGTAAGATTTTAGATGTAAATTAATTTAAATTAAGTATAAAATATTATATAATTAAAAATATGGCAAAACTTTAATAACATTAAATAAATATCATAAAATTCCATAAAGCTAACAGTTTTCCTAAATAAAACTGTTTCGTTTCCATAAGACAATTGCTTTAGTAATAAATATATATATTAAGGCGATAACTTAAATCATTTTTTTTTATAACTAAGCCCCTGAAGATTTGCTTGCCGTCTATCGATAGCATACAGAGCTTATCGATTGGTTAGTGTTTTTATTTTACTTCCAGCTGACGGGCGGCAATTATATTGTATTTGTTGTGGTTTTCGGTGGAGCGCG
*****************************************************************************************************************************************************************************((..(((((.....((((...((((...(((((((((((((((....))).))))))))))))..))))....................))))......)).)))..))************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
.....................................................................................................................................................................................................................................................................................................................................................................................TGGTTTTCGGTGGAGCG.. 17 0 1 2.00 2 2 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................GATTATCGACTGGTTAGT..................................................................... 18 2 1 2.00 2 0 2 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................AGATTATCGACTGGTTAGT..................................................................... 19 2 1 1.00 1 0 1 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................GTTTTTATTTTACTTCCAGCTGACGGGC......................................... 28 0 1 1.00 1 0 0 0 1 0 0 0
...............................................................................................................................................................................................................................................................................................................................................................................TTGTTGTGGTTTTCGGTGGAGCGCG 25 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................................................TATTTGTTGTGGTTTTCGGTG....... 21 0 1 1.00 1 0 0 1 0 0 0 0
.............................................................................................................................................................................AATAAAACTGTTTCGTT.......................................................................................................................................................................................................... 17 0 3 0.67 2 2 0 0 0 0 0 0
.............................................................................................................................................................................AATAAAACTGTTTCGTTT......................................................................................................................................................................................................... 18 0 3 0.67 2 0 0 0 0 1 0 1
...........................................................................................................................................................................................................................................................................CCTGAAGATTTGCTT.............................................................................................................. 15 0 2 0.50 1 1 0 0 0 0 0 0
......................................................GATTTTAGCTGTAAA................................................................................................................................................................................................................................................................................................................................... 15 1 20 0.35 7 0 0 0 0 2 5 0
..............................................................................................................................................................................ATAAAACTGTTTCGTT.......................................................................................................................................................................................................... 16 0 3 0.33 1 1 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................................................TGTTGTGGTTTTCGGT........ 16 0 3 0.33 1 0 0 0 0 1 0 0
.................................................................................................................................................................................................................................................................................................................GCTTGTTGATTTGTTAGTGTT.................................................................. 21 3 11 0.09 1 0 0 0 0 0 1 0
.....................................................................................................................................................................................TGTTTCGCTTCCATA.................................................................................................................................................................................................... 15 1 13 0.08 1 0 0 0 0 0 1 0
..........................................................................................................................................................................................................................................................................TCCTGAAGATTTGCT............................................................................................................... 15 1 16 0.06 1 0 0 1 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTTTACGGTGGAAA... 19 3 20 0.05 1 1 0 0 0 0 0 0

Anti-sense strand reads

AATTCGAGCAAACAAAATATTGATAGTCTAAATTATTTAAAGAAAATATACATTCTAAAATCTACATTTAATTAAATTTAATTCATATTTTATAATATATTAATTTTTATACCGTTTTGAAATTATTGTAATTTATTTATAGTATTTTAAGGTATTTCGATTGTCAAAAGGATTTATTTTGACAAAGCAAAGGTATTCTGTTAACGAAATCATTATTTATATATATAATTCCGCTATTGAATTTAGTAAAAAAAAATATTGATTCGGGGACTTCTAAACGAACGGCAGATAGCTATCGTATGTCTCGAATAGCTAACCAATCACAAAAATAAAATGAAGGTCGACTGCCCGCCGTTAATATAACATAAACAACACCAAAAGCCACCTCGCGC
**************************************************************************************************************((..(((((.....((((...((((...(((((((((((((((....))).))))))))))))..))))....................))))......)).)))..))***************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 SRR902009
testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
.....................................................................................................................................................................................................................................................................GTTCGGTGACTTCTAAACGAAT............................................................................................................. 22 3 2 0.50 1 1 0 0 0 0
.......................................GAGAAAATATATATTCTGAAAT........................................................................................................................................................................................................................................................................................................................................... 22 3 3 0.33 1 0 1 0 0 0
.....................................TAAAGAAAATATACATTGAA............................................................................................................................................................................................................................................................................................................................................... 20 2 7 0.14 1 0 0 1 0 0
............................................................................................................................................................................................................................................................................................................................................................................AGAAACAGCACCAAAAGCC......... 19 2 7 0.14 1 1 0 0 0 0
........................................................................................................................................................................................................................................................AAAAAAAATGTTGATTC............................................................................................................................... 17 1 12 0.08 1 0 0 0 1 0
................................................................................................................................................................................................................................................................................................................................TCAAAAAAATAAAATGAA...................................................... 18 1 15 0.07 1 0 0 0 0 1
..............................................................................................................................................................................................................................................................................................................................................TGCAGGTCGACTGCC........................................... 15 1 16 0.06 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:4229437-4229828 + dsi_21003 TTAAGCTCGTTTGTT-TTATAACTATCAGATTTAATAAAT---TTCT-------------------------TTTATAT----GTAAGATTT-T----------------------------------------------------------AGATGTAAATTAATTTA-AATTAAGTATAA-------AATATTA--------TAT-------------------------------------------------------------------AATTAAAAATATG----------------------------------------------------------------------------------------------------------GCAAAACTTTAATAACAT----TAAATAAATA------------------------------------------------------------TCATAAAATTCCATAAAGCTAACAGTTTTCCTAAATAAAACTGTTTCGTTTCCATAAGACAATTGCTTTAGTAA-----------------------------------------TAAATATATATA-----------TT------AAGGCGATAACTTAAATCA------------------------------------------------------------TTTTTTTTTATAACTAAGCCCCTGAAGA-TTTG-CTTGCCG-TCTATCGATAGCATACAGAGCTTA-----TCG---ATTGGTTAGTGTTTTTATTTTACTTCCAGCTGACGGGCGGC---AA-TTATATTGTATTTG-TTGTGGTT---T----------------TCGGTGGAGCGCG
droSec2 scaffold_1:1063381-1063758 + TTAAGCTCGTT-----TTCTAACTATCAGATTTAATAAAT---TTCT-------------------------TTTATAT----GTAAGATTT-T----------------------------------------------------------AGATGTAAATTAATTTA-AATTAAGTATAA-------AACAATA--------TAT-------------------------------------------------------------------AATTAGAAATATG----------------------------------------------------------------------------------------------------------GCAAAACTTTAATAACAT----TAAATAAATA------------------------------------------------------------TCATAAAATTCCATAAAGCTAACAGTTTTGCTAAATAAAACTGTTTCGTTTCC-------AATTGCTTTAGTAA-----------------------------------------TAAATATAT--A-----------TT------AAGGCGATAACTTAAATTA------------------------------------------------------------TTTTTTTGTATAACTAAGCCCCTGAAGA-TTTG-CTTGCCG-TCTATCGATAGCATACAGAGCTTA-----TCG---ATTGGTTAGCGTTTTTATTTGACTTCCAGCTGAC-GGCGGC---AA-TTATATTGTATTTG-TTGCAGTT---T----------------TCGGTGGAGCGCG
dm3 chr2R:3406468-3406855 + TTAAATTCGTTTGTT-TTATAAGTATCAAATTTAAAAAAT---TTCT-------------------------TTTATAT----GTAAGATTT-T----------------------------------------------------------AAATGTAAATTAAGATA-AATTAAGTATAA-------AATAATA--------TAC-------------------------------------------------------------------ACTTCGAGAAATG----------------------------------------------------------------------------------------------------------GCAAAACGTTAGTAATAT----TATGTAAATATTAATACTT--------------------------------------------------------TTTTTCCATAAAGCTAACAAATTTCCTCTCTT-AACTCTTTCGTATC--------AATAGTTTTAA-AA-----------------------------------------TAAATATAA--A-----------TTATACGTAAGACTTTAGCATTTATTA------------------------------------------------------------GTTT--TATGTGCCTACGCCCCTGAAGT-TTTG-CTTGCCG-TCTATCGATAGCATACAGCACTTA-----TCG---ATTGTCTAGCCTTTATATTTGACTTCCAGCTGACGGGCGGC---AA-TTATATTGAATTTG-TTGTGGTT---T----------------TCGGTGGAGCGCG
droEre2 scaffold_4929:19192324-19192753 - GTAAATTATTTCATTTTTGGAAATATATGATTCAATCTTA---TCCT-------------------------TTTATACATAAGTAAGAGTT-T----------------------------------------------------------ACCTATAAAT-ATTTAA-AATTAATTATAA-------ATTAATA--------TAC----GTAC-----------------------------------------------------------ATTTTGAAAAATG--------------------------------------------------------------------------------------------------------ACGCAAAACATTAATAACAT----TATGTAC--------TGAT--------------------------------------------------------AATTTTCATAAAGATAAGAGTTTTCTTAAATAATACTGTTACGTATCCGTAAGACCATAGCTTTAGTAATAATAATAATAATTAATAATATAATAATAATA---A-----TTAATAATA--ATTAATAATCAATT-------GAGCGATAGCTCTAATCA------------------------------------------------------------GTTTT-CTTATACCTAAGCCAGGCA----A-AGGCTAGTCG-CCTATCGATAGCATGCAGCATTCA-----TCG---ATTGGCTAGTGTTTATATTTCACTTCCAGCTGACGGGGGGC---AA-TTA--TAT---TTG-TTGTGGTT---T----------------TTGGTGGAGCGCG
droYak3 2L:16083362-16083731 + TTAAATTCTTTTCTT-TTATAAATATTAGATTCATTCTTA---TGATTTTAT-------------------------AATTAA-------TT-T----------------------------------------------------------ACCTCTAAAT-ATTTAAAAATTTAACACAA-------AATAATA--------TAT-------------------------------------------------------------------ATTTGGTAAAATT--------------------------------------------------------------------------------------------------------GCGCAAAT----AATTATTTTAATTA--------TTAATAATT--------------------------------------------------------ATTTTTCATAAAGCTAGCAGTTTTTCTAAATAAAACTCTTACGTATTCATAGAACAATAGCTTTTATAAATATA----------------------TAATA---T-----TAAATATAT--A-----------TT------AGG------------------------------------TAT--------------------------------------------CCATTCTGATAACT--CAGCA-TTTGCTTTTTCG-TCTATCGATAGCATGCAGCATTCA-----TCG---ATTGGCCAGTGTTTATATTTCACTTCCAGTTGACGGGCGGC---AA-TTT--TAT---TTG-TTGTGGTT---T----------------TTGGTGGAGCGCG
droEug1 scf7180000409672:5420641-5420917 + AGATGGTTT----------------------------------------TAA-------------------------AATTAT-------TT-T-------------------------------------------AT---CG-----------TGTAAAT--------------AATAATAAAATAATAT----GATATTAAAACACCA------ATCAAAATTAATCTTTAGGATTTATTTATAA-------------------------------------------------------------------------------------------------------------------------------------------TTTT--------------------------------------------------TAGTAATTGA------------------------------------------------------------------------------------TTCGAA---------------------------------------------------------------------------------------------------------------------------GAATAAGAGTC----------------------GTAACGTTAACCTGT-----TTATTTTCACGCCCTTAGTCCAT-AGCCCTATCG-CCTATCGATAGCATGTTTTTTGTA-----TCG---ATTCCCTAGTGTTTATATTTTTCTTCCAGCTGACAGGCCGCGGTG--TTT--TCG---GTG-TTGTGGTT---T-----T----------TTGGCGTAGCTAG
droBia1 scf7180000302292:2736621-2736931 - GTGGGCGCGGA----------------------------A---TGATCTGAT-------------------------AAATGT-------TT-T----------------------------------------------------------ATCTTTAAAT-AT----------------------------------ATAAGCACACCCGAGCAGATTCAAACTAATTTTTGTTATTAATCTAAAAAAAGACATGAACATGTTACAATAAAGTACTGGAAG---GGC-CAAAT---------------------------------------------------TT---------------------------------------TTTTGTGCAATT----AATGAGCTAATTTA--------TAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCCCCGAATAGGG-------------------------------GATCCCGACGCTCGTGGAACAT-TCTCCAATCT-CCTATCGATAGCATTCTGCACATA-----TCG---ATAGACTGGTGTTTACATTTTG-TTCCAGCTGACAGGCGGT---AAATTT--TTG---GTG-TTGTGGTT---T----------------T-TGTGGAGCGCG
droTak1 scf7180000416016:7376-7502 + CT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCCCCTGAAACAC-TGTCTTATCG-CCTATCGATAGC--TCTGCACCTA-----TCG---ATTGGCCAGTGTTTACATTTTGCTCCCAGCTGACAGGCGGC---AAATTT--TCG---GTG-TTGTGGTT---T----------------CTGGAGCAGCGCA
droEle1 scf7180000491347:241441-241745 + TTACGTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACTTGAAA---GACACAAAAATACTTATTTTAAAACAAGTAAGTCATGTTAATTTTAAATATTTATATATTTTTTTTATAACATTTCCAATGGAAATTACTTTAATATCAAGTTGT--------------------------------------------------TAATAAAGGACCCTTTAAATGAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------AT------AGA------------------------------------GAGTC----------------------TTACAGTTAACCC-------CTATCTCTACAGCCATGGAAAGT-CGATGCATCT-CCTATCGATAACACAGTGCGCCTA-----TCG---ATAGCCT-GTGTTTATATTTTACTGCCAGCTGACAGGCGGT---AA-ATT--TTG---GAG-TTGTGGTC---A----AT----------TCGGTGGAGCGCG
droRho1 scf7180000780160:19665-19898 + ATAACATTT-AT-----G----------------------------------------------------------------T-------TTATGTTAATTAAAATT-------------------------AATTCATATACGTGGAGTTT------ATTT-A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGA----TTAAATATAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGACACAAATTTTAAAATCAACCT------TTTATATCTAAGCCGGTGGAATATACGTTATATTGAATTATCGATAGCGCGCCGCAGTTA-----TCG---ATTGGTT-TTGTTTATATTTCGCTGCCAGCTGACAGGCGGT---AA-ATT--TTG---GTG-TTGTGGTT---A----AT----------TTGGTGGAGCGCG
droFic1 scf7180000453948:163604-163980 + TTTAATTCTTTTGTT-TG----------------------------------------------------------------T-------TTATGTTACTTAAAGTTTTTTTTATATTATTCATTTTTTGTTTGTTTATCTACTTGAGGTTA------TTTT-GTTAGAGAATCCAACTAATAAAATAAAATGGTTGATATTAG----------------------------------------------------------------------------------C--------------------------------------------------------------------------------------------------------GCTTAAAT----TAAGT---------------------------------TTGTAATGAAAGCTTAAAATGAAATTTAAAAATATTTTG-------------------ACAGCACACA--TTTTCTAAATTATAT-----------------------------------------------------------------------------------------------------------------------TATTATTATTAAGTGCAAGACACAAAA-----------------------------------ACC-------CTAAATCTACGCCCTTGAAAAGT-GTTCTTGTCG-CTCATCGATAGCATGCTGCGGTTA-----TCG---ATTGGCTAGTGTTTATATTTTTCTTCCAGCTGACAGGCGGC---AT-TTT--TCG---GTG-TTGTTGTT---T----TGTTGGTTTTTTTTAGTGGA--GGA
droKik1 scf7180000302471:35050-35427 - TCTTGCCAGTA----------------------------AAAATGTTCTTTTAAATTAATTATTTTAATATTTTTATAG----TTTTAGTAG-T----------------------------------------------------------AGTAGTAAAATAATTTA-A---------------TAAAATATTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTAC--------TTAAATTTATATTAAATTATAAAATT-AATTGAA------AAATATATTTATATATCATTATATTACATG--------------------------------------------------ATTTAATTATAATTTTATTATATTATTATTTTATGTTATTATTAATTTTTTTTTTTATA--TTTTATAA----------------C----------------------------GAATTTGTGGCACTCAAATAACAGACCCATT----------------------TTCGCCCTACGCCCATGGCA----------AACA-ACAATCGATAACTTTCAGAGCAAATTATGCCGGTAATCGGCTTG--------------ACTCAGCTGTCTGGCGAA---AA-ACT--TCG---GTCACACTGGTTGTTG----------------CTGGTGGAGCG-G
droAna3 scaffold_13266:16373488-16373504 - GT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---G----------------TTAGTGAAATAGG
droBip1 scf7180000395838:91382-91443 + AAAAAAATCCACTAT-TA----------------------------------------------------------------T-------T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTT----TATACAAGCA------------------------------------------------------------TCTTTAAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-T-T--TTA---AA-------ATT---TTA-----------------------TGTG
dp5 3:12337587-12337676 - TAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG-TCTCTCG----------GCTGCTA-----TCG---ATACGCT-TTGTTTATCTTCTGAAACTGACAGGCGGGCGGC---AC-T-T--TCG---GA-------GTT---TACAG--------------TCAGGAGCCGG
droPer2 scaffold_44:519709-519798 - TAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG-TCTCTCG----------GCTGCTA-----TCG---ATACGCT-TTGTTTATCTTCTGAAACTGACAGGCGGGCGGC---AC-T-T--TCG---GA-------GTT---TACAG--------------TCAGGAGCCGG
droVir3 scaffold_12875:17551349-17551357 + TG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATCTTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTAAGCTCGTTTGTT-TTATAACTATCAGATTTAATAAAT---TTCT-------------------------TTTATAT----GTAAGATTT-T----------------------------------------------------------AGATGTAAATTAATTTA-AATTAAGTATAA-------AATATTA--------TAT-------------------------------------------------------------------AATTAAAAATATG----------------------------------------------------------------------------------------------------------GCAAAACTTTAATAACAT----TAAATAAATA------------------------------------------------------------TCATAAAATTCCATAAAGCTAACAGTTTTCCTAAATAAAACTGTTTCGTTTCCATAAGACAATTGCTTTAGTAA-----------------------------------------TAAATATATATA-----------TT------AAGGCGATAACTTAAATCA------------------------------------------------------------TTTTTTTTTATAACTAAGCCCCTGAAGA-TTTG-CTTGCCG-TCTATCGATAGCATACAGAGCTTA-----TCG---ATTGGTTAGTGTTTTTATTTTACTTCCAGCTGACGGGCGGC---AA-TTATATTGTATTTG-TTGTGGTT---T----------------TCGGTGGAGCGCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTT---T----------------TCGGTGGAGCG..1712.00200000000002000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTTATTTTACTTCCAGCTGACGGGC.................................................................2811.00110000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTG-TTGTGGTT---T----------------TCGGTGGAGCGCG2511.00100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTG-TTGTGGTT---T----------------TCGGTG.......2111.00100000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAAAACTGTTTCGTT...................................................................................................................................................................................................................................................................................................................................................................1730.67200000000002000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAAAACTGTTTCGTTT..................................................................................................................................................................................................................................................................................................................................................................1830.67200000010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGAAGA-TTTG-CTT...............................................................................................................................................1520.50100000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAACTGTTTCGTT...................................................................................................................................................................................................................................................................................................................................................................1630.33100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-TTGTGGTT---T----------------TCGGT........1630.33100000010000000000
droSec2
TTAAGCTCGTT-----TTCTAACTATCAGATTTAATAAAT---TTCT-------------------------TTTATAT----GTAAGATTT-T----------------------------------------------------------AGATGTAAATTAATTTA-AATTAAGTATAA-------AACAATA--------TAT-------------------------------------------------------------------AATTAGAAATATG----------------------------------------------------------------------------------------------------------GCAAAACTTTAATAACAT----TAAATAAATA------------------------------------------------------------TCATAAAATTCCATAAAGCTAACAGTTTTGCTAAATAAAACTGTTTCGTTTCC-------AATTGCTTTAGTAA-----------------------------------------TAAATATAT--A-----------TT------AAGGCGATAACTTAAATTA------------------------------------------------------------TTTTTTTGTATAACTAAGCCCCTGAAGA-TTTG-CTTGCCG-TCTATCGATAGCATACAGAGCTTA-----TCG---ATTGGTTAGCGTTTTTATTTGACTTCCAGCTGAC-GGCGGC---AA-TTATATTGTATTTG-TTGCAGTT---T----------------TCGGTGGAGCGCGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGTT---T----------------TCGGTGGAGCG..1812.0020002
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGTT---T----------------TCGGTGGAGCG..1911.0010001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTT---T----------------TCGGTGGAGCGC.1811.0010010
dm3
TTAAATTCGTTTGTT-TTATAAGTATCAAATTTAAAAAAT---TTCT-------------------------TTTATAT----GTAAGATTT-T----------------------------------------------------------AAATGTAAATTAAGATA-AATTAAGTATAA-------AATAATA--------TAC-------------------------------------------------------------------ACTTCGAGAAATG----------------------------------------------------------------------------------------------------------GCAAAACGTTAGTAATAT----TATGTAAATATTAATACTT--------------------------------------------------------TTTTTCCATAAAGCTAACAAATTTCCTCTCTT-AACTCTTTCGTATC--------AATAGTTTTAA-AA-----------------------------------------TAAATATAA--A-----------TTATACGTAAGACTTTAGCATTTATTA------------------------------------------------------------GTTT--TATGTGCCTACGCCCCTGAAGT-TTTG-CTTGCCG-TCTATCGATAGCATACAGCACTTA-----TCG---ATTGTCTAGCCTTTATATTTGACTTCCAGCTGACGGGCGGC---AA-TTATATTGAATTTG-TTGTGGTT---T----------------TCGGTGGAGCGCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTT---T----------------TCGGTGGAGCG..1817.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000001000000000000000000100000000000000000000000001010000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTTG-TTGTGGTT---T----------------TCGGTGGAG....2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001100010000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTG-TTGTGGTT---T----------------TCGGTGG......2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGAATTTG-TTGTGGTT---T----------------TCGGT........2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGAATTTG-TTGTGGT..................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCAGCTGACGGGCGGC---AA-TT......................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTT---T----------------TCGGTGGAG....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTG-TTGTGGTT---T----------------TCGGTGGAGCGC.2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGCATACAGCACTTA-----TCG---ATTGTCTAGC.............................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTTG-TTGTGGTT---T----------------TCGGTG.......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAATTTG-TTGTGGTT---T----------------TCG..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTG-TTGTGGTT---T----------------TCGGTGGAGC...2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGACTTCCAGCTGACGGGCGG...............................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACTTCCAGCTGACGGGCGG...............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGAATTTG-TTGTGG...................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTG-TTGTGGTT---T----------------TCGGTGGAGCGC.2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-TTGTGGTT---T----------------TCGGTGGAG....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTG-TTGTGGTT---T----------------TCGGTGGAG....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTT---T----------------TCGGTGGAGCGCG1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGACTTCCAGCTGACGGGCG................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-TTGTGGTT---T----------------TCGGTGGA.....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-TTGTGGTT---T----------------TCGGTGGAGCGC.2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTT---T----------------TCGGTGGAGC...1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTG-TTGTGGTT---T----------------TCGGTGGAGCGCG2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACTTA-----TCG---ATTGTCTAGCCTT..........................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTT---T----------------TCGGTGGAGCGC.1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTCCAGCTGACGGGCGG...............................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTCCAGCTGACGGGCGG...............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-TTATATTGAATTTG-TTG......................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATATTGAATTTG-TTGTGGT..................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGACGGGCGGC---AA-TTATA...................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-TTGTGGTT---T----------------TCGGTGGAG....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-TTGTGGTT---T----------------TCGGTGGA.....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---AA-TTATATTGAATTTG-TT.......................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTT---T----------------TCGGTGGAGCGCG2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATTTG-TTGTGGTT---T----------------TCGGTGGAGC...2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-TTATATTGAATTTG-TTGTGGT..................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTG-TTGTGGTT---T----------------TCGGTG.......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGACTTCCAGCTGACGGGCGGC---...........................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTTG-TTGTGGTT---T----------------TCGGTGGAGCG..2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTG-TTGTGGTT---T----------------TCGGTGGAGCGCG2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-TTATATTGAATTTG-TTGT.....................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTT---T----------------TCGGTGGAGCGCG1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
droEre2
GTAAATTATTTCATTTTTGGAAATATATGATTCAATCTTA---TCCT-------------------------TTTATACATAAGTAAGAGTT-T----------------------------------------------------------ACCTATAAAT-ATTTAA-AATTAATTATAA-------ATTAATA--------TAC----GTAC-----------------------------------------------------------ATTTTGAAAAATG--------------------------------------------------------------------------------------------------------ACGCAAAACATTAATAACAT----TATGTAC--------TGAT--------------------------------------------------------AATTTTCATAAAGATAAGAGTTTTCTTAAATAATACTGTTACGTATCCGTAAGACCATAGCTTTAGTAATAATAATAATAATTAATAATATAATAATAATA---A-----TTAATAATA--ATTAATAATCAATT-------GAGCGATAGCTCTAATCA------------------------------------------------------------GTTTT-CTTATACCTAAGCCAGGCA----A-AGGCTAGTCG-CCTATCGATAGCATGCAGCATTCA-----TCG---ATTGGCTAGTGTTTATATTTCACTTCCAGCTGACGGGGGGC---AA-TTA--TAT---TTG-TTGTGGTT---T----------------TTGGTGGAGCGCGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
TTAAATTCTTTTCTT-TTATAAATATTAGATTCATTCTTA---TGATTTTAT-------------------------AATTAA-------TT-T----------------------------------------------------------ACCTCTAAAT-ATTTAAAAATTTAACACAA-------AATAATA--------TAT-------------------------------------------------------------------ATTTGGTAAAATT--------------------------------------------------------------------------------------------------------GCGCAAAT----AATTATTTTAATTA--------TTAATAATT--------------------------------------------------------ATTTTTCATAAAGCTAGCAGTTTTTCTAAATAAAACTCTTACGTATTCATAGAACAATAGCTTTTATAAATATA----------------------TAATA---T-----TAAATATAT--A-----------TT------AGG------------------------------------TAT--------------------------------------------CCATTCTGATAACT--CAGCA-TTTGCTTTTTCG-TCTATCGATAGCATGCAGCATTCA-----TCG---ATTGGCCAGTGTTTATATTTCACTTCCAGTTGACGGGCGGC---AA-TTT--TAT---TTG-TTGTGGTT---T----------------TTGGTGGAGCGCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
AGATGGTTT----------------------------------------TAA-------------------------AATTAT-------TT-T-------------------------------------------AT---CG-----------TGTAAAT--------------AATAATAAAATAATAT----GATATTAAAACACCA------ATCAAAATTAATCTTTAGGATTTATTTATAA-------------------------------------------------------------------------------------------------------------------------------------------TTTT--------------------------------------------------TAGTAATTGA------------------------------------------------------------------------------------TTCGAA---------------------------------------------------------------------------------------------------------------------------GAATAAGAGTC----------------------GTAACGTTAACCTGT-----TTATTTTCACGCCCTTAGTCCAT-AGCCCTATCG-CCTATCGATAGCATGTTTTTTGTA-----TCG---ATTCCCTAGTGTTTATATTTTTCTTCCAGCTGACAGGCCGCGGTG--TTT--TCG---GTG-TTGTGGTT---T-----T----------TTGGCGTAGCTAGSizeHit CountTotal NormTotal
No Reads
droBia1
GTGGGCGCGGA----------------------------A---TGATCTGAT-------------------------AAATGT-------TT-T----------------------------------------------------------ATCTTTAAAT-AT----------------------------------ATAAGCACACCCGAGCAGATTCAAACTAATTTTTGTTATTAATCTAAAAAAAGACATGAACATGTTACAATAAAGTACTGGAAG---GGC-CAAAT---------------------------------------------------TT---------------------------------------TTTTGTGCAATT----AATGAGCTAATTTA--------TAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCCCCGAATAGGG-------------------------------GATCCCGACGCTCGTGGAACAT-TCTCCAATCT-CCTATCGATAGCATTCTGCACATA-----TCG---ATAGACTGGTGTTTACATTTTG-TTCCAGCTGACAGGCGGT---AAATTT--TTG---GTG-TTGTGGTT---T----------------T-TGTGGAGCGCGSizeHit CountTotal NormTotal
No Reads
droTak1
CT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCCCCTGAAACAC-TGTCTTATCG-CCTATCGATAGC--TCTGCACCTA-----TCG---ATTGGCCAGTGTTTACATTTTGCTCCCAGCTGACAGGCGGC---AAATTT--TCG---GTG-TTGTGGTT---T----------------CTGGAGCAGCGCASizeHit CountTotal NormTotal
No Reads
droEle1
TTACGTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACTTGAAA---GACACAAAAATACTTATTTTAAAACAAGTAAGTCATGTTAATTTTAAATATTTATATATTTTTTTTATAACATTTCCAATGGAAATTACTTTAATATCAAGTTGT--------------------------------------------------TAATAAAGGACCCTTTAAATGAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------AT------AGA------------------------------------GAGTC----------------------TTACAGTTAACCC-------CTATCTCTACAGCCATGGAAAGT-CGATGCATCT-CCTATCGATAACACAGTGCGCCTA-----TCG---ATAGCCT-GTGTTTATATTTTACTGCCAGCTGACAGGCGGT---AA-ATT--TTG---GAG-TTGTGGTC---A----AT----------TCGGTGGAGCGCGSizeHit CountTotal NormTotal
No Reads
droRho1
ATAACATTT-AT-----G----------------------------------------------------------------T-------TTATGTTAATTAAAATT-------------------------AATTCATATACGTGGAGTTT------ATTT-A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGA----TTAAATATAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGACACAAATTTTAAAATCAACCT------TTTATATCTAAGCCGGTGGAATATACGTTATATTGAATTATCGATAGCGCGCCGCAGTTA-----TCG---ATTGGTT-TTGTTTATATTTCGCTGCCAGCTGACAGGCGGT---AA-ATT--TTG---GTG-TTGTGGTT---A----AT----------TTGGTGGAGCGCGSizeHit CountTotal NormTotal
No Reads
droFic1
TTTAATTCTTTTGTT-TG----------------------------------------------------------------T-------TTATGTTACTTAAAGTTTTTTTTATATTATTCATTTTTTGTTTGTTTATCTACTTGAGGTTA------TTTT-GTTAGAGAATCCAACTAATAAAATAAAATGGTTGATATTAG----------------------------------------------------------------------------------C--------------------------------------------------------------------------------------------------------GCTTAAAT----TAAGT---------------------------------TTGTAATGAAAGCTTAAAATGAAATTTAAAAATATTTTG-------------------ACAGCACACA--TTTTCTAAATTATAT-----------------------------------------------------------------------------------------------------------------------TATTATTATTAAGTGCAAGACACAAAA-----------------------------------ACC-------CTAAATCTACGCCCTTGAAAAGT-GTTCTTGTCG-CTCATCGATAGCATGCTGCGGTTA-----TCG---ATTGGCTAGTGTTTATATTTTTCTTCCAGCTGACAGGCGGC---AT-TTT--TCG---GTG-TTGTTGTT---T----TGTTGGTTTTTTTTAGTGGA--GGASizeHit CountTotal NormTotal
No Reads
droKik1
TCTTGCCAGTA----------------------------AAAATGTTCTTTTAAATTAATTATTTTAATATTTTTATAG----TTTTAGTAG-T----------------------------------------------------------AGTAGTAAAATAATTTA-A---------------TAAAATATTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTAC--------TTAAATTTATATTAAATTATAAAATT-AATTGAA------AAATATATTTATATATCATTATATTACATG--------------------------------------------------ATTTAATTATAATTTTATTATATTATTATTTTATGTTATTATTAATTTTTTTTTTTATA--TTTTATAA----------------C----------------------------GAATTTGTGGCACTCAAATAACAGACCCATT----------------------TTCGCCCTACGCCCATGGCA----------AACA-ACAATCGATAACTTTCAGAGCAAATTATGCCGGTAATCGGCTTG--------------ACTCAGCTGTCTGGCGAA---AA-ACT--TCG---GTCACACTGGTTGTTG----------------CTGGTGGAGCG-GSizeHit CountTotal NormTotal
No Reads
droAna3
GT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---G----------------TTAGTGAAATAGGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
AAAAAAATCCACTAT-TA----------------------------------------------------------------T-------T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTT----TATACAAGCA------------------------------------------------------------TCTTTAAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-T-T--TTA---AA-------ATT---TTA-----------------------TGTGSizeHit CountTotal NormTotal
No Reads
dp5
TAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG-TCTCTCG----------GCTGCTA-----TCG---ATACGCT-TTGTTTATCTTCTGAAACTGACAGGCGGGCGGC---AC-T-T--TCG---GA-------GTT---TACAG--------------TCAGGAGCCGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTGAAACTGACAGGCGG...................................................................2011.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTT---TACAG--------------TCAGGAGCCG.1811.0010000010000
droPer2
TAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG-TCTCTCG----------GCTGCTA-----TCG---ATACGCT-TTGTTTATCTTCTGAAACTGACAGGCGGGCGGC---AC-T-T--TCG---GA-------GTT---TACAG--------------TCAGGAGCCGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------GTT---TACAG--------------TCAGGAGCC..1813.003300000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGAAACTGACAGGCGGGC.................................................................2111.001100000
droVir3
TG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATCTTGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads

Generated: 05/18/2015 at 10:45 PM