dsi_20818

exon [2r_15356869_15356946_+]; CDS [2r_15356869_15356946_+]; exon [2r_15356432_15356665_+]; CDS [2r_15356432_15356665_+]; intron [2r_15356666_15356868_+]

##################################################-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## AGCAGCAGAAGATTGTGCAGGCTGAGGGAGAAGCCGAGGCTGCCAAAATGATATCCTTTTACAAAACACTAACTAGAACAGTTTGTACCCTTTTACATCTGACTAAAAGGCTTTTAGTATGTTGTGAGCTGGAAAAACTGCATTGTTTTTCCATGTTCATTATTTACTTTTGGCCTTCTGGAAACATGTAAATAGGGATTAGGTTTACCCAGTTTTTTGCCACCTACTGGTTCTTCTTAACTGATATGTTTACTTAGGTCTGGCCGTGAAGCAAAACCCAGCCTACCTGAAGCTGCGCAAGCT **********************************************************************************************************************.(((((((((((((((((......))))))))).))))))......................))*********************************************************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M025 embryo	SRR553487 NRT_0-2 hours eggs	M053 female body	SRR902008 ovaries	SRR618934 dsim w501 ovaries	M024 male body	M023 head	O001 Testis	SRR553485 Chicharo_3 day-old ovaries	SRR902009 testis	GSM343915 embryo
...AGCAGAAGATTGTGCAGGCTGAGG....................................................................................................................................................................................................................................................................................	24	0	1	3.00	3	3	0	0	0	0	0	0	0	0	0	0
......AGAAGATTGTGCAGGCTGAGGGAGAA...............................................................................................................................................................................................................................................................................	26	0	1	2.00	2	0	0	0	0	0	2	0	0	0	0	0
.......GAAGATTGTGCAGGCTGAGG....................................................................................................................................................................................................................................................................................	20	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
............TTGTGCAGGCTGAGGGAGAAGCCGAGGC.......................................................................................................................................................................................................................................................................	28	0	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.....CAGAAGATTGTTCAGGCT........................................................................................................................................................................................................................................................................................	18	1	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0
............TTGTGCAGGCTGAGGGAGAAG..............................................................................................................................................................................................................................................................................	21	0	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0
AGCAGCAGAAGATTGTTCAGGCTGA......................................................................................................................................................................................................................................................................................	25	1	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
............................................................................................................................................................................................................................................................................AAGCAGAACCCAGCCTACCTGAAGCA.........	26	2	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
..........................................ACAAAATGATATCCTGTTACCA...............................................................................................................................................................................................................................................	22	3	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................GTTGTGAGCTGGAAAAA......................................................................................................................................................................	17	0	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................TGGCCGTGAAGCAGAACCCAGCC....................	23	1	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
...........................................CAAAATGATATCCTGTTACCAAA.............................................................................................................................................................................................................................................	23	2	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................ATTATTTACTTTTGGCCTTCTGGAAA.......................................................................................................................	26	0	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...........................................TAAAATGATATCCTGTTACCAA..............................................................................................................................................................................................................................................	22	3	2	1.00	2	0	2	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................GGTCTGGCCGTGAAGCAA.............................	18	0	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0
...AGCAGAAGATTGTGCAGGCTGAGGG...................................................................................................................................................................................................................................................................................	25	0	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................GCCTACCTGAAGCTGCGCAA...	20	0	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..CAGCAGAAGATTGTGCAG...........................................................................................................................................................................................................................................................................................	18	0	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0
........AAGATTGTGCAGGCTGGGGGAGCT...............................................................................................................................................................................................................................................................................	24	3	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1
.......GAAGATTGTGCAGGCTGAGGGA..................................................................................................................................................................................................................................................................................	22	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
......AGAAGATTGTGCTGGATGA......................................................................................................................................................................................................................................................................................	19	2	4	0.25	1	0	0	0	0	1	0	0	0	0	0	0
.....................................................................................................................GAGGTTGTGAGCTGAAAAAAC.....................................................................................................................................................................	21	3	5	0.20	1	0	1	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................GAAACATCTAAGTAGG...........................................................................................................	16	2	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................TGTTGTTATCTGGAAAAA......................................................................................................................................................................	18	2	20	0.05	1	0	0	0	0	1	0	0	0	0	0	0

TCGTCGTCTTCTAACACGTCCGACTCCCTCTTCGGCTCCGACGGTTTTACTATAGGAAAATGTTTTGTGATTGATCTTGTCAAACATGGGAAAATGTAGACTGATTTTCCGAAAATCATACAACACTCGACCTTTTTGACGTAACAAAAAGGTACAAGTAATAAATGAAAACCGGAAGACCTTTGTACATTTATCCCTAATCCAAATGGGTCAAAAAACGGTGGATGACCAAGAAGAATTGACTATACAAATGAATCCAGACCGGCACTTCGTTTTGGGTCGGATGGACTTCGACGCGTTCGA *********************************************************************************************************************.(((((((((((((((((......))))))))).))))))......................))**********************************************************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553487 NRT_0-2 hours eggs	SRR553488 RT_0-2 hours eggs	SRR553485 Chicharo_3 day-old ovaries
.............................................TTTACTATAGTCAAAAGTTTTGT...........................................................................................................................................................................................................................................	23	3	2	0.50	1	1	0	0
................................................................................................................................................................................................................................ATGACCAAGAAGATT................................................................	15	1	14	0.07	1	0	1	0
.......................................................................................GGGACAATGTAGAATG........................................................................................................................................................................................................	16	2	20	0.05	1	0	0	1

Species	Coordinate	ID	Alignment
droSim2	2r:15356616-15356918 +	dsi_20818	AGCAGCAGAAGATTGTGCAG-GCTGAGGGAGAAGCCGAGGCTGCCAAAATGATATCCTTTTA-CAAA-ACAC--TAACTA----GAAC-AGTTTGT-A-CCCTTTTACATCTGACTAAAAGGCTTTTAGTATGTTGTGAGCT--------------------------------GG---------------------------------------------------AAAAACTGCATTGTTTTTCCATGTTCATTATTTACTT-TTGGCCTTCTG---GAAACATGT-AAATAG-GGAT-TAG-GTTTACC-CAGTT-TTTT-GCCACCTACTGGTT--CTTCTTAACTGATATGTTTACTTAGGTCTGGCCGTGAAGCAAAACCCAGCCTACCTGAAGCTGCGCAAGCT
droSec2	scaffold_1:12216426-12216728 +		AACAGCAGAAGATTGTGCAG-GCTGAGGGAGAAGCCGAGGCTGCCAAAATGATATCCTTTTA-CAAA-ACAC--TAACTA----GAAC-ATTTTGT-A-CCCTTTTACATCTGACTAAAAGGCTGTTAGTACGTTGTAAGCT--------------------------------GG---------------------------------------------------AAAAACTGCATTGTTTTTCTGTGTCTATCATTTACTT-TTGGCCTTCTG---GAAACATGT-AAATAG-GGAT-TAG-GTTTACC-CACTT-TTTT-GCCACCTACTGGTT--CTTCTTAACTGATATGTTTACTTAGGTCTGGCCGTGAAGCAGAACCCAGCCTACCTGAAGCTGCGCAAGCT
dm3	chr2R:14708294-14708595 +		AGCAGCAGAAGATTGTTCAG-GCTGAGGGAGAAGCCGAGGCTGCTAAAATGATATCCTTTTA-CAAA-ACAC--TAACTA----GAAC-ATTTTTT---CCCTTTTACATCTGACTAAAAGGCTGTTAGTATGTTGTGAGCT--------------------------------GG---------------------------------------------------AAAAACTGTATTGTTTTTCTGTGTTCATCGTTTATTT-TTGGCCTTCTT---GAAATATGT-AAATAG-GGAT-TAT-GCTTACC-CAATT-TATT-GCCACCTACTGGTT--CTTCTTAACTGATATGTTTACTTAGGTCTGGCCGTGAAGCAGAACCCAGCCTACCTGAAGCTGCGCAAGCT
droEre2	scaffold_4845:8900157-8900458 +		AGCAGCAGAAGATTGTGCAG-GCTGAGGGAGAAGCCGAGGCTGCCAAAATGATATCCTTTTA-CAAA-ACAC--TAACTT----AAAA-ATCCGTT-A-CGCTTTTACATCTGACTAATAAGCTGTTAGTATTTTGTGAGCT--------------------------------AG---------------------------------------------------A-AAACTTCCCTGCTTTTCTTTGTTCACCGTGTACTT-TTGGCCTTCTA---GAAACATGT-AAATTG-GGAT-TAG-GTTTACC-AACTT-TTTT-GCCACCTACTGGTT--CTTCTTAACTGATATGTTTACTTAGGTCTGGCCGTGAAGCAGAACCCAGCCTACCTGAAGCTGCGCAAGCT
droYak3	2R:14487606-14487908 -		AGCAGCAGAAGATTGTGCAG-GCTGAGGGAGAAGCCGAGGCTGCCAAAATGATATCCTTTTA-CAAA-ACAC--TAACTT----AAAA-GTCCGTT-A-CCCTTTTACATCTGTCTAATAAGCTGTCAGTATTCTGTGAGCT--------------------------------AG---------------------------------------------------AAAAACTGCACTGTTTTTCTTTGTTCGCCGTGTACTT-TTGGCCTTCTA---GAAACATGT-AAATTG-GGAT-TAG-GTTTGCC-AACAT-TATT-GCCACCTACTGGTT--CTCCTTAACTGATATGTTTACTTAGGTCTGGCCGTGAAGCAGAACCCAGCCTACCTGAAACTGCGCAAGCT
droEug1	scf7180000409663:638894-639198 -		AGCAGCAGAAGATTGTCCAG-GCCGAGGGAGAAGCCGAGGCAGCAAAAATGATATCCTTTTA-CAAA-AATC--AAACTA----TTAT--CTTAGA-ACCCATTACAAATATAACTAAAAAGTTATTTGTGCCTAGTAAGCT--------------------------------AG---------------------------------------------------AGGAACTAATATGGTATTCTAAGTTTACCAGATATTTATTAATTTTTTA---GTAGCTTGT-AAAAGGAAGCT-TAA-CTTTTCT-AATTC-TCTT-GCCAACAAATGGTT--TTCCTTAACCGATATGTTTACTTAGGTCTGGCCGTGAAGCAGAACCCAGCCTACCTGAAACTGCGTAAGCT
droBia1	scf7180000302292:1678551-1678830 -		AGCAGCAGAAGATTGTCCAG-GCCGAGGGAGAAGCCGAGGCTGCGAAAATGATATCCTTTTA-CAAA-ACAC--TAACTA----GACA--CTTAAAAA-CCCTTTTACATCTAACTGGAAACATGTTAGTATCATGTGAACT--------------------------------A--------------------------------------------------------------------------GTTTACCAGATACTT-TTGGCTTCACA---GTAACATGT-AAATAG-GGCTATAG-GGTTATC-CACTTTCTTT-GCCACC--ATGGTT--CTCCTTAACTGATATGTTTACTTAGGTCTGGCCGTGAAGCAGAACCCAGCCTACCTCAAACTGCGCAAGCT
droTak1	scf7180000415991:142717-143007 +		AGCAACAGAAGATTGTCCAG-GCGGAGGGAGAAGCCGAGGCTGCTAAAATGATATCCTTTTA-CAAA-ACTC--TAACTA----TAAACTATTTAAAA-CCTTTACATATACAACTGATAAGTCATTAGTATCTTGTGAGCT--------------------------------AG----------------------------------------------------------------GTCTTCCAAGCTTAACAGATATCT-TTGGTTTCACA---GTATTGTGT-AAAAAA-ACCC-TAC-CTTT-CC-CAATT-TATT-GCCACCAAATGGTT--CTCCTTAACTGATATGTTCACTTAGGTCTGGCCGTGAAGCAGAACCCAGCCTACCTCAAGCTGCGCAAGCT
droEle1	scf7180000491228:255285-255589 -		AGCAGCAGAAGATTGTCCAG-GCCGAGGGAGAAGCCGAGGCTGCTAAAATGATATCCTTTTA-CAAA-AAAC--AAACTAACCCGAAA--CTTTGA-ACCACTCACACTTCGCACTTAAAGGCTGTTATTATCTCTTAAGCT--------------------------------AA---------------------------------------------------AGAAACTGCATTGGTTTCGTTAGATTACCAGCTATTA-TTGGCCTTAAA---GTAACGTGT-GAATGG-GGAC-T----TTTGCCCTTCTT-TATT-GCCACCACATGGTT--CTCCTTAACTGTTATGTTCACTTAGGTCTGGCCGTCAAGCAGAACCCAGCCTACCTCAAGCTGCGAAAGCT
droRho1	scf7180000766409:45039-45338 -		AGCAGCAGAAGATTGTACAG-GCCGAGGGAGAAGCCGAGGCTGCTAAAATGATATCCTTTTA-CAAAAACAC--CAACTA----GAAA--CCTAGA-ACCATTCACACTTCTTACTACAAAGATAGTATTATCCTGTAAGCA--------------------------------A----------------------------------------------------AAAAGCTGCATTGGTTTT-TAAGTTTACTGGCTAGTA-TAGGCTTTAGA---GTAATATGTTGAATGG-GGAC-T----TTT-TC-CACTTTATTT-GCCACCATATGGTT--CTCCTTAACTGATATGTTTACTTAGGTCTGGCCGTGAAGCAGAACCCAGCCTACCTCAAACTGCGCAAGCT
droFic1	scf7180000453811:250369-250670 -		AGCAGCAGAAGATTGTCCAG-GCTGAGGGAGAAGCTGAGGCTGCCAAAATGATATCCTTTTA-CAAA-ACAC--AAACCT----TTTT-ACTTTGA-A-CTATTACACACATAACTGAAAGGCTGTTGGTATCTTGTAAGCT--------------------------------AG---------------------------------------------------AGAAACTACTTTGGTTTCCCAAGTTTACAAGCTAATG-TTGGCCTTATATATGTATTATGT-----GG-AAAT-CCA-CCTTACC-CATAT-TTTT-GCCACCTTATGGTT--CTCCTTAACTGATATGTTTACTTAGGTCTGGCCGTGAAGCAGAACCCTGCCTACCTCAAACTGCGCAAGCT
droKik1	scf7180000302682:422580-422848 +		AGCAGCAGAAGATTGTCCAG-GCCGAGGGAGAAGCTGAGGCTGCAAAAATGATATCCTTTTA-CAAA-AAACTCAAACGA----GAA---------------------ATCTACCTTAAAAGCCAAGAG--------AGGCTGGTATTCAGTACAAACTATTG---------ATTGC--------------------------CAGCTTCTTTTTTGTTTTAGAGATAAAAACT--------------------------------------------------------------------AACTTTTATACCCCTT-TATTGCCCTCCAAATGGTT--CTCCTTAACTGATATGTTCACTTAGGTCTGGCCGTAAAGCAGAACCCAGCCTACCTCAAGCTGCGCAAGCT
droAna3	scaffold_13266:17646663-17646866 -		AGCAGCAGAAGATTGTCCAG-GCCGAGGGAGAAGCCGAGGCTGCCAAAATGATATCCTTTTA-AAAA-CAAA--AAACA-----------------------------------------------------------------------------------------CT--TCAG----------ATGCTT----------TCAGA--TTCCTTTATTA-------------------------------------------------------------------------------------TTTTACCCTCATT-TTTT-GCCAACCAATGGTT--CTCCTTAATAGATATGTTTACTTAGGTCTGGCCGTGAAGCAGAACCCTGCCTACCTCAAGCTGCGCAAGTT
droBip1	scf7180000396735:914899-915104 -		AACAGCAGAAGATCGTCCAG-GCCGAGGGAGAAGCCGAGGCTGCCAAAATGATATCCTTTTA-CAAA-CAAC--AAACA-----------------------------------------------------------------------------------------CTTTTCAG----------ATATTT----------TCATA--TTTCTTTATTA-------------------------------------------------------------------------------------TTTTGCGTTTATT-TTTT-GCCACCCAATGGTT--CTCCTTAATAGATATGTTTACTTAGGTCTGGCCGTGAAGCAGAACCCTGCCTACCTCAAGCTGCGCAAGTT
dp5	3:2503407-2503598 +		AGCAACAGAAGATTGTCCAG-GCTGAGGGTGAAGCCGAGGCAGCGAAAATGATATCCTTTTA-CAAACACAC--AAACTT----TA---------------------------TCTT------------------------------------TCGATTTAGCA--------ATTGCCAT-T---------------------------------------------------------------------------------------------------------------------------------------TGATTT-GT---CCCCTGGTTTTTCCCTTAACCGATATGTTTACTTAGGTCTGGCCGTGAAGCAGAACCCAGCTTATCTGAAGCTGCGCAAGCT
droPer2	scaffold_2:2692486-2692561 +		AGCAACAGAAGATTGTTCAGGGCTGAGGGTGAAGCAGAGGCAGCGAAAATGATATCCTTTTA-CAAACACAC--AAACT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2	scf2_1100000004510:2210753-2210956 +		AACAACAGAAGATTGTCCAG-GCTGAGGGTGAAGCCGAGGCAGCTAAAATGATATCCTTTTA-CAAA-AAACTTAAACC-----------T---------------------ATCTTAA----------------------------------TTAACTTAAC---------ATTGCCAA-T-------------------------TA---------------------------------TTTCTATGCCAA-----------------------------------------------------------------TTTT-----CCTTTTGGTTTCCACCTTAACTGATATGTTTACTTAGGTCTGGCCGTTAAACAGAATCCAGCTTATTTGAAATTGCGTAAGCT
droVir3	scaffold_12875:13476546-13476737 -	dvi_6697	AACAACAGAAGATCGTGCAG-GCCGAGGGTGAAGCCGAGGCAGCCAAAATGATATCCTTTTAACAAA-ACT---TAACG-----------C---------------------ATTCTAG----------------------------------C---------A--CACTTTTTAGGCAT-T-------------------------TA--------------------------------------------------------------------------------------------------------------TTTT-GTATGCACTTGGTTTGCACCTTAACTGATATGTTTACTTAGGTCTGGCCGTCAAGCAGAATCCAGCCTACCTGAAGCTGCGTAAGCT
droMoj3	scaffold_6496:6913626-6913849 -		AACAACAGAAAATTGTCCAA-GCTGAGGGAGAAGCTGAGGCAGCTAAAATGATATCCTTTTTACAAA-ACA----AACCA----TT-------------------------------------------------------------------------TAGC----------TAGGCAT-TTTATATATGTTTAGCACTACTTATT--TTATTTTATTT-------------------------------------------------------------------------------------TTTCATATATATT-TCTT-G----CACTTGGTTTGCACCTTAACTGTCATGTTTACTTAGGTCTGGCTGTCAAACAGAATCCAGCTTATCTCAAGTTGCGCAAACT
droGri2	scaffold_15245:17756931-17757131 +		AGCAACAGAAGATTGTCCAG-GCCGAGGGTGAAGCCGAGGCAGCCAAAATGATATCCTTTTAACAAA-TC-A--AAGCTT----AAAC-AT---------------------ATATTTG----------------------------------C---------AATCATTTTATAGGAAAAT-------------------------AA---------------------------------------------------------------------------------------------------------TTTT-TTTT-G----CACTTGGTTTGCACCTTAACTGTTATGTTTACTTAGGTCTGGCCGTCAAGCAGAATCCAGCCTACCTCAAGTTGAGAAAGTT

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

AGCAGCAGAAGATTGTGCAG-GCTGAGGGAGAAGCCGAGGCTGCCAAAATGATATCCTTTTA-CAAA-ACAC--TAACTA----GAAC-AGTTTGT-A-CCCTTTTACATCTGACTAAAAGGCTTTTAGTATGTTGTGAGCT--------------------------------GG---------------------------------------------------AAAAACTGCATTGTTTTTCCATGTTCATTATTTACTT-TTGGCCTTCTG---GAAACATGT-AAATAG-GGAT-TAG-GTTTACC-CAGTT-TTTT-GCCACCTACTGGTT--CTTCTTAACTGATATGTTTACTTAGGTCTGGCCGTGAAGCAAAACCCAGCCTACCTGAAGCTGCGCAAGCT	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
...AGCAGAAGATTGTGCAG-GCTGAGG...............................................................................................................................................................................................................................................................................................................................................................................................	24	1	3.00	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......AGAAGATTGTGCAG-GCTGAGGGAGAA..........................................................................................................................................................................................................................................................................................................................................................................................	26	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......GAAGATTGTGCAG-GCTGAGG...............................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............TTGTGCAG-GCTGAGGGAGAAGCCGAGGC..................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
............TTGTGCAG-GCTGAGGGAGAAG.........................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
....................................................................................................................................GTTGTGAGCT--------------------------------GG---------------------------------------------------AAAAA...................................................................................................................................................................................	17	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................ATTATTTACTT-TTGGCCTTCTG---GAAA................................................................................................................................	26	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................GGTCTGGCCGTGAAGCAA.............................	18	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
...AGCAGAAGATTGTGCAG-GCTGAGGG..............................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................GCCTACCTGAAGCTGCGCAA...	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..CAGCAGAAGATTGTGCAG-......................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.......GAAGATTGTGCAG-GCTGAGGGA.............................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSec2

AACAGCAGAAGATTGTGCAG-GCTGAGGGAGAAGCCGAGGCTGCCAAAATGATATCCTTTTA-CAAA-ACAC--TAACTA----GAAC-ATTTTGT-A-CCCTTTTACATCTGACTAAAAGGCTGTTAGTACGTTGTAAGCT--------------------------------GG---------------------------------------------------AAAAACTGCATTGTTTTTCTGTGTCTATCATTTACTT-TTGGCCTTCTG---GAAACATGT-AAATAG-GGAT-TAG-GTTTACC-CACTT-TTTT-GCCACCTACTGGTT--CTTCTTAACTGATATGTTTACTTAGGTCTGGCCGTGAAGCAGAACCCAGCCTACCTGAAGCTGCGCAAGCT	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
...................G-GCTGAGGGAGAAGCCGAGGC..................................................................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	1	0	1
......................................................................................................................................................................................................................................................................................................................................................................................................CTACCTGAAGCTGCGCAAGCT	21	1	2.00	2	0	0	2	0
.......................TGAGGGAGAAGCCGAGGC..................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0
........AAGATTGTGCAG-GCTGAGG...............................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0
.............TGTGCAG-GCTGAGGGAGAAGCC.......................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0
.....CAGAAGATTGTGCAG-GCT...................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0
............TTGTGCAG-GCTGAGGGAGAAG.........................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0
...AGCAGAAGATTGTGCAG-GCTGAGGG..............................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0
......AGAAGATTGTGCAG-GCTGAGG...............................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0
.............TGTGCAG-GCTGAGGGAGAAGCCGAGGCT.................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	1
.......GAAGATTGTGCAG-GCTGAGG...............................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................TGAAGCAGAACCCAGCCTACCTG..............	23	1	1.00	1	1	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................CTGGCCGTGAAGCAGAACCCAGC.....................	23	1	1.00	1	0	0	1	0
........................................................................................................................................................................................................................................................................................................................................................................................................ACCTGAAGCTGCGCAAGCT	19	1	1.00	1	0	0	1	0
............................................................................................................................................................................................................................................................................................................................................................................GGTCTGGCCGTGAAGCAGAACCCA.......................	24	1	1.00	1	0	0	1	0

dm3

AGCAGCAGAAGATTGTTCAG-GCTGAGGGAGAAGCCGAGGCTGCTAAAATGATATCCTTTTA-CAAA-ACAC--TAACTA----GAAC-ATTTTTT---CCCTTTTACATCTGACTAAAAGGCTGTTAGTATGTTGTGAGCT--------------------------------GG---------------------------------------------------AAAAACTGTATTGTTTTTCTGTGTTCATCGTTTATTT-TTGGCCTTCTT---GAAATATGT-AAATAG-GGAT-TAT-GCTTACC-CAATT-TATT-GCCACCTACTGGTT--CTTCTTAACTGATATGTTTACTTAGGTCTGGCCGTGAAGCAGAACCCAGCCTACCTGAAGCTGCGCAAGCT	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
....GCAGAAGATTGTTCAG-GCTGAGGGA.............................................................................................................................................................................................................................................................................................................................................................................................	25	1	13.00	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........AGATTGTTCAG-GCTGAGGGAGAA..........................................................................................................................................................................................................................................................................................................................................................................................	23	1	8.00	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................GAGGGAGAAGCCGAGGCT.................................................................................................................................................................................................................................................................................................................................................................................	18	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................GGGAGAAGCCGAGGCTGCTAAAA..........................................................................................................................................................................................................................................................................................................................................................................	23	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6
...........ATTGTTCAG-GCTGAGGGAGA...........................................................................................................................................................................................................................................................................................................................................................................................	20	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0
...AGCAGAAGATTGTTCAG-GCTGAGG...............................................................................................................................................................................................................................................................................................................................................................................................	24	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................TGGCCGTGAAGCAGAACCCAGC.....................	22	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......AGAAGATTGTTCAG-GCTGAGGGAGA...........................................................................................................................................................................................................................................................................................................................................................................................	25	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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...................................................................................................................TAAAAGGCTGTTAGTATGTTG...................................................................................................................................................................................................................................................................................	21	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........ATTGTTCAG-GCTGAGGGA.............................................................................................................................................................................................................................................................................................................................................................................................	18	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........GATTGTTCAG-GCTGAGGGA.............................................................................................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............TGTTCAG-GCTGAGGGAGAAGCCGAGA...................................................................................................................................................................................................................................................................................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......AGAAGATTGTTCAG-GCTGAGGGAGAAGCC.......................................................................................................................................................................................................................................................................................................................................................................................	29	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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..................AG-GCTGAGGGAGAAGCCGAGGCTGC...............................................................................................................................................................................................................................................................................................................................................................................	25	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................TGAGGGAGAAGCCGAGGCTGC...............................................................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................TAGGTCTGGCCGTGAAGCAGAACCCA.......................	26	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................GCTGAGGGAGAAGCCGAGG...................................................................................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........GATTGTTCAG-GCTGAGGGAGAAGCC.......................................................................................................................................................................................................................................................................................................................................................................................	25	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........AGATTGTTCAG-GCTGAGGGAG............................................................................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........GATTGTTCAG-GCTGAGGGAGAAG.........................................................................................................................................................................................................................................................................................................................................................................................	23	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......GAAGATTGTTCAG-GCTGAGGGAGT...........................................................................................................................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.........................................................................................................................GCTGTTAGTATGTTGTGAG...............................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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...............TTCAG-GCTGAGGGAGAAGCCGAGG...................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................CTTTTA-CAAA-ACAC--TAACTA----GAAC-A.................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.......................................................................................................................................................................................................................................................................................................................................................................................................TACCTGAAGCTGCGCAAGCT	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................GTT--CTTCTTAACTGATATGT......................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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............................................................................................................................................................................................................................................................................................................................................................................GGTCTGGCCGTGAAGCAG.............................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................AAGCCGAGGCTGCTAAAATG........................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......GAAGATTGTTCAG-GCTGAGGGAGAA..........................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......AGAAGATTGTTCAG-GCTGAGGGAGAAGC........................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................TGAGGGAGAAGCCGAGGCTGCTAAT...........................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................TATGTTGTGAGCT--------------------------------GG---------------------------------------------------AAAAACTGT...............................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

AGCAGCAGAAGATTGTGCAG-GCTGAGGGAGAAGCCGAGGCTGCCAAAATGATATCCTTTTA-CAAA-ACAC--TAACTT----AAAA-ATCCGTT-A-CGCTTTTACATCTGACTAATAAGCTGTTAGTATTTTGTGAGCT--------------------------------AG---------------------------------------------------A-AAACTTCCCTGCTTTTCTTTGTTCACCGTGTACTT-TTGGCCTTCTA---GAAACATGT-AAATTG-GGAT-TAG-GTTTACC-AACTT-TTTT-GCCACCTACTGGTT--CTTCTTAACTGATATGTTTACTTAGGTCTGGCCGTGAAGCAGAACCCAGCCTACCTGAAGCTGCGCAAGCT	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
..........GATTGTGCAG-GCTGAGGGAGA...........................................................................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	2	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................GTCTGGCCGTGAAGCAGAACCCAGC.....................	25	1	2.00	2	1	0	0	0	0	1	0
.........AGATTGTGCAG-GCTGAGG...............................................................................................................................................................................................................................................................................................................................................................................................	18	1	2.00	2	0	0	0	0	1	1	0
...........................................................................................................................................................................................................................................................................................................................................................................AGGTCTGGCCGTGAAGCAGAACCCAGC.....................	27	1	2.00	2	1	1	0	0	0	0	0
...........ATTGTGCAG-GCTGAGGGA.............................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0	0	0
........AAGATTGTGCAG-GCTGAGG...............................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0
......AGAAGATTGTGCAG-GCTGAGG...............................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
....GCAGAAGATTGTGCAG-GCTG..................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0	0
AGCAGCAGAAGATTGTGCAG-GCTGA.................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	1	0	0
..CAGCAGAAGATTGTGCAG-GCTGAGG...............................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
...AGCAGAAGATTGTGCAG-GCTGAGG...............................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0
..........GATTGTGCAG-GCTGAGGGAGAAGC........................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0	0
.........AGATTGTGCAG-GCTGAGGG..............................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0
.......................TGAGGGAGAAGCCGAGGCTGCCAA............................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0
.............TGTGCAG-GCTGAGGGAGA...........................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	1	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................CTACCTGAAGCTGCGCAAGC.	20	1	1.00	1	0	1	0	0	0	0	0
.......GAAGATTGTGCAG-GCTGAGG...............................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0
.......GAAGATTGTGCAG-GCTGAG................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................AACCCAGCCTACCTGAAGC..........	19	1	1.00	1	1	0	0	0	0	0	0

droYak3

AGCAGCAGAAGATTGTGCAG-GCTGAGGGAGAAGCCGAGGCTGCCAAAATGATATCCTTTTA-CAAA-ACAC--TAACTT----AAAA-GTCCGTT-A-CCCTTTTACATCTGTCTAATAAGCTGTCAGTATTCTGTGAGCT--------------------------------AG---------------------------------------------------AAAAACTGCACTGTTTTTCTTTGTTCGCCGTGTACTT-TTGGCCTTCTA---GAAACATGT-AAATTG-GGAT-TAG-GTTTGCC-AACAT-TATT-GCCACCTACTGGTT--CTCCTTAACTGATATGTTTACTTAGGTCTGGCCGTGAAGCAGAACCCAGCCTACCTGAAACTGCGCAAGCT	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
......AGAAGATTGTGCAG-GCTGAGG...............................................................................................................................................................................................................................................................................................................................................................................................	21	1	3.00	3	3	0	0	0	0	0	0	0	0	0	0
......AGAAGATTGTGCAG-GCTGAG................................................................................................................................................................................................................................................................................................................................................................................................	20	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0
.....CAGAAGATTGTGCAG-GCTGAGG...............................................................................................................................................................................................................................................................................................................................................................................................	22	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
...AGCAGAAGATTGTGCAG-GCTG..................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
....GCAGAAGATTGTGCAG-GCT...................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
....................................................................................................................AATAAGCTGTCAGTATTCTGTGA................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
......AGAAGATTGTGCAG-GCTGAGGGAGAAGC........................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.......................................................................................................................................GTGAGCT--------------------------------AG---------------------------------------------------AAAAACTGCACTGTT.........................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...........ATTGTGCAG-GCTGAGGGAG............................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
................GCAG-GCTGAGGGAGAAGCCGAGGCT.................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.......GAAGATTGTGCAG-GCTGAGG...............................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.....................................................................................................................ATAAGCTGTCAGTATTCTGTG.................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................CTGGTT--CTCCTTAACTGATATGTTTAC..................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................CCAGCCTACCTGAAACTGC.......	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
......AGAAGATTGTGCAG-GCTGAGGGA.............................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
......................CTGAGGGAGAAGCCGAGGCTGCCA.............................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
......AGAAGATTGTGCAG-GCTGAGGGAGA...........................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1
...............................................................................................................................................................................................................................................................................................................................................................................CTGGCCGTGAAGCAGAACCCAGCC....................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
....GCAGAAGATTGTGCAG-GCTGAGG...............................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
............TTGTGCAG-GCTGAGGGAGAAGCCGAGGC..................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.......GAAGATTGTGCAG-GCTGAGGGA.............................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.............TGTGCAG-GCTGAGGGAGAAGCCGAGGCTG................................................................................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0

droEug1

AGCAGCAGAAGATTGTCCAG-GCCGAGGGAGAAGCCGAGGCAGCAAAAATGATATCCTTTTA-CAAA-AATC--AAACTA----TTAT--CTTAGA-ACCCATTACAAATATAACTAAAAAGTTATTTGTGCCTAGTAAGCT--------------------------------AG---------------------------------------------------AGGAACTAATATGGTATTCTAAGTTTACCAGATATTTATTAATTTTTTA---GTAGCTTGT-AAAAGGAAGCT-TAA-CTTTTCT-AATTC-TCTT-GCCAACAAATGGTT--TTCCTTAACCGATATGTTTACTTAGGTCTGGCCGTGAAGCAGAACCCAGCCTACCTGAAACTGCGTAAGCT	Size	Hit Count	Total Norm	Total
No Reads

droBia1

AGCAGCAGAAGATTGTCCAG-GCCGAGGGAGAAGCCGAGGCTGCGAAAATGATATCCTTTTA-CAAA-ACAC--TAACTA----GACA--CTTAAAAA-CCCTTTTACATCTAACTGGAAACATGTTAGTATCATGTGAACT--------------------------------A--------------------------------------------------------------------------GTTTACCAGATACTT-TTGGCTTCACA---GTAACATGT-AAATAG-GGCTATAG-GGTTATC-CACTTTCTTT-GCCACC--ATGGTT--CTCCTTAACTGATATGTTTACTTAGGTCTGGCCGTGAAGCAGAACCCAGCCTACCTCAAACTGCGCAAGCT	Size	Hit Count	Total Norm	Total
No Reads

droTak1

AGCAACAGAAGATTGTCCAG-GCGGAGGGAGAAGCCGAGGCTGCTAAAATGATATCCTTTTA-CAAA-ACTC--TAACTA----TAAACTATTTAAAA-CCTTTACATATACAACTGATAAGTCATTAGTATCTTGTGAGCT--------------------------------AG----------------------------------------------------------------GTCTTCCAAGCTTAACAGATATCT-TTGGTTTCACA---GTATTGTGT-AAAAAA-ACCC-TAC-CTTT-CC-CAATT-TATT-GCCACCAAATGGTT--CTCCTTAACTGATATGTTCACTTAGGTCTGGCCGTGAAGCAGAACCCAGCCTACCTCAAGCTGCGCAAGCT	Size	Hit Count	Total Norm	Total
No Reads

droEle1

AGCAGCAGAAGATTGTCCAG-GCCGAGGGAGAAGCCGAGGCTGCTAAAATGATATCCTTTTA-CAAA-AAAC--AAACTAACCCGAAA--CTTTGA-ACCACTCACACTTCGCACTTAAAGGCTGTTATTATCTCTTAAGCT--------------------------------AA---------------------------------------------------AGAAACTGCATTGGTTTCGTTAGATTACCAGCTATTA-TTGGCCTTAAA---GTAACGTGT-GAATGG-GGAC-T----TTTGCCCTTCTT-TATT-GCCACCACATGGTT--CTCCTTAACTGTTATGTTCACTTAGGTCTGGCCGTCAAGCAGAACCCAGCCTACCTCAAGCTGCGAAAGCT	Size	Hit Count	Total Norm	Total
No Reads

droRho1

AGCAGCAGAAGATTGTACAG-GCCGAGGGAGAAGCCGAGGCTGCTAAAATGATATCCTTTTA-CAAAAACAC--CAACTA----GAAA--CCTAGA-ACCATTCACACTTCTTACTACAAAGATAGTATTATCCTGTAAGCA--------------------------------A----------------------------------------------------AAAAGCTGCATTGGTTTT-TAAGTTTACTGGCTAGTA-TAGGCTTTAGA---GTAATATGTTGAATGG-GGAC-T----TTT-TC-CACTTTATTT-GCCACCATATGGTT--CTCCTTAACTGATATGTTTACTTAGGTCTGGCCGTGAAGCAGAACCCAGCCTACCTCAAACTGCGCAAGCT	Size	Hit Count	Total Norm	Total
No Reads

droFic1

AGCAGCAGAAGATTGTCCAG-GCTGAGGGAGAAGCTGAGGCTGCCAAAATGATATCCTTTTA-CAAA-ACAC--AAACCT----TTTT-ACTTTGA-A-CTATTACACACATAACTGAAAGGCTGTTGGTATCTTGTAAGCT--------------------------------AG---------------------------------------------------AGAAACTACTTTGGTTTCCCAAGTTTACAAGCTAATG-TTGGCCTTATATATGTATTATGT-----GG-AAAT-CCA-CCTTACC-CATAT-TTTT-GCCACCTTATGGTT--CTCCTTAACTGATATGTTTACTTAGGTCTGGCCGTGAAGCAGAACCCTGCCTACCTCAAACTGCGCAAGCT	Size	Hit Count	Total Norm	Total
No Reads

droKik1

AGCAGCAGAAGATTGTCCAG-GCCGAGGGAGAAGCTGAGGCTGCAAAAATGATATCCTTTTA-CAAA-AAACTCAAACGA----GAA---------------------ATCTACCTTAAAAGCCAAGAG--------AGGCTGGTATTCAGTACAAACTATTG---------ATTGC--------------------------CAGCTTCTTTTTTGTTTTAGAGATAAAAACT--------------------------------------------------------------------AACTTTTATACCCCTT-TATTGCCCTCCAAATGGTT--CTCCTTAACTGATATGTTCACTTAGGTCTGGCCGTAAAGCAGAACCCAGCCTACCTCAAGCTGCGCAAGCT	Size	Hit Count	Total Norm	Total
No Reads

droAna3

AGCAGCAGAAGATTGTCCAG-GCCGAGGGAGAAGCCGAGGCTGCCAAAATGATATCCTTTTA-AAAA-CAAA--AAACA-----------------------------------------------------------------------------------------CT--TCAG----------ATGCTT----------TCAGA--TTCCTTTATTA-------------------------------------------------------------------------------------TTTTACCCTCATT-TTTT-GCCAACCAATGGTT--CTCCTTAATAGATATGTTTACTTAGGTCTGGCCGTGAAGCAGAACCCTGCCTACCTCAAGCTGCGCAAGTT	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
........................................................................................................................................................................................................................................................................................................................................................................................................ACCTCAAGCTGCGCAAGT.	18	1	1.00	1	0	0	1	0	0	0
.....CAGAAGATTGTCCAG-GCCGAGGGA.............................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................GGCCGTGAAGCAGAACCCTGCCTAC.................	25	1	1.00	1	1	0	0	0	0	0
.........AGATTGTCCAG-GCCGAGGGAGAAGCCGA.....................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0
......AGAAGATTGTCCAG-GCCGAGGGAG............................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0
.................................................................................................................................................................................................................................................................................................................................................................................GGCCGTGAAGCAGAACCCT.......................	19	1	1.00	1	0	1	0	0	0	0
...........ATTGTCCAG-GCCGAGGGAGAAGCCGAGG...................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0
.............TGTCCAG-GCCGAGGGAGAAGCC.......................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
.............TGTCCAG-GCCGAGGGAGAA..........................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................GTGAAGCAGAACCCTGCCTACCTCAA............	26	1	1.00	1	0	0	1	0	0	0
...........................GGAGAAGCCGAGGCTGCCAAAAT.........................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0
..........GATTGTCCAG-GCCGAGGGAGA...........................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
..............GTCCAG-GCCGAGGGAGAAGC........................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1
..................AG-GCCGAGGGAGAAGCCGAGGC..................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................TCTGGCCGTGAAGCAGAACCC........................	21	1	1.00	1	0	1	0	0	0	0
...........ATTGTCCAG-GCCGAGGGAGAA..........................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
..........GATTGTCCAG-GCCGAGGGAGAAGCCGA.....................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	1	0
........................GAGGGAGAAGCCGAGGCTGCCAAAA..........................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................GCCTACCTCAAGCTGCGC.....	18	3	0.33	1	0	1	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................TGCCTACCTCAAGCTGCGC.....	19	3	0.33	1	0	1	0	0	0	0

droBip1

AACAGCAGAAGATCGTCCAG-GCCGAGGGAGAAGCCGAGGCTGCCAAAATGATATCCTTTTA-CAAA-CAAC--AAACA-----------------------------------------------------------------------------------------CTTTTCAG----------ATATTT----------TCATA--TTTCTTTATTA-------------------------------------------------------------------------------------TTTTGCGTTTATT-TTTT-GCCACCCAATGGTT--CTCCTTAATAGATATGTTTACTTAGGTCTGGCCGTGAAGCAGAACCCTGCCTACCTCAAGCTGCGCAAGTT	Size	Hit Count	Total Norm	Total
No Reads

dp5

AGCAACAGAAGATTGTCCAG-GCTGAGGGTGAAGCCGAGGCAGCGAAAATGATATCCTTTTA-CAAACACAC--AAACTT----TA---------------------------TCTT------------------------------------TCGATTTAGCA--------ATTGCCAT-T---------------------------------------------------------------------------------------------------------------------------------------TGATTT-GT---CCCCTGGTTTTTCCCTTAACCGATATGTTTACTTAGGTCTGGCCGTGAAGCAGAACCCAGCTTATCTGAAGCTGCGCAAGCT	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
..CAACAGAAGATTGTCCAG-GCTGAGGG..............................................................................................................................................................................................................................................................................................................................................................................................	26	1	3.00	3	0	0	0	0	0	0	0	0	3	0
.GCAACAGAAGATTGTCCAG-GCT...................................................................................................................................................................................................................................................................................................................................................................................................	22	1	3.00	3	0	1	0	0	2	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................CTGGCCGTGAAGCAGAACCCAGC.....................	23	1	2.00	2	0	1	1	0	0	0	0	0	0	0
........AAGATTGTCCAG-GCTGAGGG..............................................................................................................................................................................................................................................................................................................................................................................................	20	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.............................TGAAGCCGAGGCAGCGAAAATG........................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0
......AGAAGATTGTCCAG-GCTGAGGG..............................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................TGAGGGTGAAGCCGAGGCAGCGAAAAT.........................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......GAAGATTGTCCAG-GCTGAGG...............................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	1	0
AGCAACAGAAGATTGTCCAG-GCC...................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................CTGGCCGTGAAGCAGAACCC........................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................TAGGTCTGGCCGTGAAGCAGAAC..........................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................CGTGAAGCAGAACCCAGCTT...................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...AACAGAAGATTGTCCAG-GCT...................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................TGGCCGTGAAGCAGAACCCAGC.....................	22	1	1.00	1	0	0	0	0	1	0	0	0	0	0
AGCAACAGAAGATTGTCCAG-GC....................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............GTCCAG-GCTGAGGGTGAAGCCGAGGC..................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................GCTTATCTGAAGCTGCGCA....	19	1	1.00	1	0	0	0	0	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................GCCGTGAAGCAGAACCCAGCT....................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........GATTGTCCAG-GCTGAGGGTGA...........................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................TGAGGGTGAAGCCGAGGCA.................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0

droPer2

AGCAACAGAAGATTGTTCAGGGCTGAGGGTGAAGCAGAGGCAGCGAAAATGATATCCTTTTA-CAAACACAC--AAACT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
AGCAACAGAAGATTGTTCAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................	22	1	4.00	4	4	0	0	0	0	0
...AACAGAAGATTGTTCAGGCT....................................................................................................................................................................................................................................................................................................................................................................................................	20	2	2.00	4	4	0	0	0	0	0
.....CAGAAGATTGTTCAGGCT....................................................................................................................................................................................................................................................................................................................................................................................................	18	9	0.67	6	6	0	0	0	0	0
....ACAGAAGATTGTTCAGGCT....................................................................................................................................................................................................................................................................................................................................................................................................	19	3	0.33	1	1	0	0	0	0	0

droWil2

AACAACAGAAGATTGTCCAG-GCTGAGGGTGAAGCCGAGGCAGCTAAAATGATATCCTTTTA-CAAA-AAACTTAAACC-----------T---------------------ATCTTAA----------------------------------TTAACTTAAC---------ATTGCCAA-T-------------------------TA---------------------------------TTTCTATGCCAA-----------------------------------------------------------------TTTT-----CCTTTTGGTTTCCACCTTAACTGATATGTTTACTTAGGTCTGGCCGTTAAACAGAATCCAGCTTATTTGAAATTGCGTAAGCT	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
..........GATTGTCCAG-GCTGAGGGT.............................................................................................................................................................................................................................................................................................................................................................................................	19	2	5.00	10	0	0	4	6	0
.......................TGAGGGTGAAGCCGAGGC..................................................................................................................................................................................................................................................................................................................................................................................	18	2	1.50	3	0	1	0	2	0
....................................................................................................................................................................................................................................................................................................................................................................................CGTTAAACAGAATCCAGCT....................	19	2	1.50	3	0	0	0	3	0
.....................................................................................................................................................................................................................................................................................................................................................................................GTTAAACAGAATCCAGCTT...................	19	2	1.50	3	0	0	0	3	0
...........ATTGTCCAG-GCTGAGGGT.............................................................................................................................................................................................................................................................................................................................................................................................	18	2	1.00	2	0	0	0	2	0
..............................................................................................................................................................................................................................................................................................................................................................................................AATCCAGCTTATTTGAAATTGCGTA....	25	1	1.00	1	0	0	0	1	0
..........GATTGTCCAG-GCTGAGGGTGAAGC........................................................................................................................................................................................................................................................................................................................................................................................	24	2	1.00	2	0	0	1	1	0
.....................................................................................................................................................................................................................................................................................................................................................................................GTTAAACAGAATCCAGCT....................	18	2	1.00	2	0	0	0	2	0
..........GATTGTCCAG-GCTGAGGGTGA...........................................................................................................................................................................................................................................................................................................................................................................................	21	2	1.00	2	0	0	0	2	0
...........ATTGTCCAG-GCTGAGGGTGAAGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................	27	2	1.00	2	0	0	0	2	0
..........GATTGTCCAG-GCTGAGGGTG............................................................................................................................................................................................................................................................................................................................................................................................	20	2	1.00	2	0	1	0	1	0
........................................................................................................................................................................................................................................................................................................................................................................................................ATTTGAAATTGCGTAAGC.	18	1	1.00	1	0	0	0	1	0
.......................................................................................................................................................................................................................................................................................................................................................................................................TATTTGAAATTGCGTAAGC.	19	1	1.00	1	0	0	0	1	0
.....................GCTGAGGGTGAAGCCGAGG...................................................................................................................................................................................................................................................................................................................................................................................	19	2	0.50	1	0	0	0	1	0
.........AGATTGTCCAG-GCTGAGGGT.............................................................................................................................................................................................................................................................................................................................................................................................	20	2	0.50	1	0	0	0	0	1
.........AGATTGTCCAG-GCTGAGGGTGAA..........................................................................................................................................................................................................................................................................................................................................................................................	23	2	0.50	1	0	0	0	1	0
...............................................................................................................................................................................................................................................................................................................................................................................CTGGCCGTTAAACAGAATCC........................	20	2	0.50	1	0	0	0	1	0
........AAGATTGTCCAG-GCTGAGGGTG............................................................................................................................................................................................................................................................................................................................................................................................	22	2	0.50	1	0	0	0	1	0
......AGAAGATTGTCCAG-GCTGAGGGT.............................................................................................................................................................................................................................................................................................................................................................................................	23	2	0.50	1	1	0	0	0	0
..........GATTGTCCAG-GCTGAGGGTGAA..........................................................................................................................................................................................................................................................................................................................................................................................	22	2	0.50	1	0	0	0	1	0
......................CTGAGGGTGAAGCCGAGGCA.................................................................................................................................................................................................................................................................................................................................................................................	20	2	0.50	1	0	0	0	1	0
....ACAGAAGATTGTCCAG-GCTGAGGGT.............................................................................................................................................................................................................................................................................................................................................................................................	25	2	0.50	1	0	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................AGGTCTGGCCGTTAAACAG.............................	19	2	0.50	1	0	0	0	1	0
.....CAGAAGATTGTCCAG-GCTGAGGGT.............................................................................................................................................................................................................................................................................................................................................................................................	24	2	0.50	1	0	0	1	0	0
.......................TGAGGGTGAAGCCGAGGCAGCTAAAA..........................................................................................................................................................................................................................................................................................................................................................................	26	2	0.50	1	0	0	0	1	0
.......................TGAGGGTGAAGCCGAGGCA.................................................................................................................................................................................................................................................................................................................................................................................	19	2	0.50	1	0	0	0	1	0
....ACAGAAGATTGTCCAG-GCTGA.................................................................................................................................................................................................................................................................................................................................................................................................	21	2	0.50	1	0	0	0	1	0
..........GATTGTCCAG-GCTGAGGGTGAAG.........................................................................................................................................................................................................................................................................................................................................................................................	23	2	0.50	1	0	0	0	1	0
.............TGTCCAG-GCTGAGGGTGAAG.........................................................................................................................................................................................................................................................................................................................................................................................	20	2	0.50	1	0	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................................................................GCCGTTAAACAGAATCCAGCTT...................	22	2	0.50	1	0	0	0	1	0
...AACAGAAGATTGTCCAG-GCTGAGG...............................................................................................................................................................................................................................................................................................................................................................................................	24	2	0.50	1	1	0	0	0	0
......AGAAGATTGTCCAG-GCTGAGG...............................................................................................................................................................................................................................................................................................................................................................................................	21	2	0.50	1	0	0	0	1	0
........................GAGGGTGAAGCCGAGGCAGC...............................................................................................................................................................................................................................................................................................................................................................................	20	2	0.50	1	0	0	0	1	0
......................CTGAGGGTGAAGCCGAGGC..................................................................................................................................................................................................................................................................................................................................................................................	19	2	0.50	1	0	0	0	1	0
...AACAGAAGATTGTCCAG-G.....................................................................................................................................................................................................................................................................................................................................................................................................	18	2	0.50	1	0	0	0	1	0
......AGAAGATTGTCCAG-GCTGAGGGTGAA..........................................................................................................................................................................................................................................................................................................................................................................................	26	2	0.50	1	0	0	0	1	0

droVir3

AACAACAGAAGATCGTGCAG-GCCGAGGGTGAAGCCGAGGCAGCCAAAATGATATCCTTTTAACAAA-ACT---TAACG-----------C---------------------ATTCTAG----------------------------------C---------A--CACTTTTTAGGCAT-T-------------------------TA--------------------------------------------------------------------------------------------------------------TTTT-GTATGCACTTGGTTTGCACCTTAACTGATATGTTTACTTAGGTCTGGCCGTCAAGCAGAATCCAGCCTACCTGAAGCTGCGTAAGCT	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................GCCGTCAAGCAGAATCCAGC.....................	20	1	2.00	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................CTACCTGAAGCTGCGTAAGC.	20	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................TGGCCGTCAAGCAGAATCC........................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................ACCTGAAGCTGCGTAAGCT	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...................................................ATATCCTTTTAACAAA-ACT---TAACG-----------C---------------------AT.........................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
.......................CGAGGGTGAAGCCGAGGC..................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.ACAACAGAAGATCGTGCAG-GC....................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................CACCTTAACTGATATGTTTACA.................................................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................GCCTACCTGAAGCTGCGTAAG..	21	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................GCAG-GCCGAGGGTGAAGCCGAGGC..................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........GATCGTGCAG-GCCGAGGGT.............................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................CGTCAAGCAGAATCCAGCCTACCTGA.............	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................ACTTGGTTTGCACCTTAACTGAT..........................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......GAAGATCGTGCAG-GCCGAGGGTG............................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................AAGCCGAGGCAGCCAAAATGAA......................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................AGGGTGAAGCCGAGGCAGCCAAAA..........................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..CAACAGAAGATCGTGCAG-GC....................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.ACAACAGAAGATCGTGCAG-GCCG..................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.........................AGGGTGAAGCCGAGGCAGCCAG............................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................TTTTAACAAA-ACT---TAACG-----------C---------------------...........................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........AAGATCGTGCAG-GCCGAGGGT.............................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................TGGCCGTCAAGCAGAATCCAGC.....................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............CGTGCAG-GCCGAGGGTGAAGCCGAGGC..................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.ACAACAGAAGATCGTGCAG-GCCGAGG...............................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................TGCACCTTAACTGATATGTTT....................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...AACAGAAGATCGTGCAG-GCC...................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...................................................ATATCCTTTTAACAAA-ACT---TAACG-----------C---------------------A..........................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................CAAGCAGAATCCAGCCTACCT...............	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........AGATCGTGCAG-GCCGAGG...............................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................TTT-GTATGCACTTGGTTTGCA.....................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......AGAAGATCGTGCAG-GCCGAGGGT.............................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................TTAACAAA-ACT---TAACG-----------C---------------------ATTCTAG----------------------------------C---------A--CA...................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................AACTGATATGTTTACC.................................................	16	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0

droMoj3

AACAACAGAAAATTGTCCAA-GCTGAGGGAGAAGCTGAGGCAGCTAAAATGATATCCTTTTTACAAA-ACA----AACCA----TT-------------------------------------------------------------------------TAGC----------TAGGCAT-TTTATATATGTTTAGCACTACTTATT--TTATTTTATTT-------------------------------------------------------------------------------------TTTCATATATATT-TCTT-G----CACTTGGTTTGCACCTTAACTGTCATGTTTACTTAGGTCTGGCTGTCAAACAGAATCCAGCTTATCTCAAGTTGCGCAAACT	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
......AGAAAATTGTCCAA-GCTGAGGGAG............................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	1
.....................GCTGAGGGAGAAGCTGAGGCAGCTAAA...........................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
.....................GCTGAGGGAGAAGCTGAGGC..................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1
..........................................................................................................................................................................................................................................................................................................................................................................TAGGTCTGGCTGTCAAACAGAATCCAGCT....................	29	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................GCACCTTAACTGTCATGTTTAC..................................................	22	1	1.00	1	1	0	0	0	0	0
......AGAAAATTGTCCAA-GCTGAGGG..............................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
.......................TGAGGGAGAAGCTGAGGCAGCT..............................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0

droGri2

AGCAACAGAAGATTGTCCAG-GCCGAGGGTGAAGCCGAGGCAGCCAAAATGATATCCTTTTAACAAA-TC-A--AAGCTT----AAAC-AT---------------------ATATTTG----------------------------------C---------AATCATTTTATAGGAAAAT-------------------------AA---------------------------------------------------------------------------------------------------------TTTT-TTTT-G----CACTTGGTTTGCACCTTAACTGTTATGTTTACTTAGGTCTGGCCGTCAAGCAGAATCCAGCCTACCTCAAGTTGAGAAAGTT	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
......................CCGAGGGTGAAGCCGAGGC..................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0
.......................CGAGGGTGAAGCCGAGGC..................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	1	0

dsi_20818

2r:15356666-15356868 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-18.9	-18.4