ID:

dsi_20722

 Coordinate:

3l:11389355-11389504 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-8.6 -8.6 -8.5

Flybase annnotation

three_prime_UTR [3l_11389477_11389859_+]; CDS [3l_11389168_11389476_+]; exon [3l_11389168_11389859_+]

No Repeatable elements found

Sense Strand Reads

##########################################################################################################################################################################################################################################################
CGTTTGCATTCAGCTGTATCTTCAGCGCAACAGCAACATCGACGAAAATGGTAAGGGTTCGGTCGCTTCTGCCTCCGCCACTGCCTCACCCTCTGCACCCCTGGAAACAGACATTCCTAAAAATACTGACCATAAAGACGGTGACGGGTTCCGCGAAGTCGACTTGAGTTGATGGTGACCGTGATCCTCTTCCTGAATTTTGAATTTTGTAGTCTTATGTAAATTGACGGATTTAAACTTATCTAACCAG
*****************************************************************************************************************..............(((((....(((..((.(((...)))))..)))....)).)))......************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 M053
female body
 SRR902008
ovaries
 SRR902009
testis
 M023
head
 SRR553488
RT_0-2 hours eggs
 M024
male body		 O001
Testis
.....................................................................................................................................................TCCGCGAAGTCGACTTGAGTTGATGGT.......................................................................... 27 0 1 23.00 23 17 5 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TCTTATGTAAATTGACGGATTTAAACT........... 27 0 1 18.00 18 8 10 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TCCGCGAAGTCGACTTGAGTTGATGG........................................................................... 26 0 1 14.00 14 8 5 0 0 0 1 0 0 0 0 0
....................TTCAGCGCAACAGCAACATCGACGAAAA.......................................................................................................................................................................................................... 28 0 1 14.00 14 13 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................TACTGACCATAAAGACGGTGACGGGT..................................................................................................... 26 0 1 10.00 10 5 4 1 0 0 0 0 0 0 0 0
....................................................................................................................................................TTCCGCGAAGTCGACTTGAGTTGA.............................................................................. 24 0 1 9.00 9 3 4 2 0 0 0 0 0 0 0 0
..TTTGCATTCTGCTGTTTCTTCACCG............................................................................................................................................................................................................................... 25 3 1 7.00 7 1 0 0 6 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TTATGTAAATTGACGGATTTAAACT........... 25 0 1 6.00 6 3 2 0 0 0 0 0 0 1 0 0
....................TTCAGCGCAACAGCAACATCGACGAA............................................................................................................................................................................................................ 26 0 1 6.00 6 6 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................TGAATTTTGTAGTCTTATGTAAAT.......................... 24 0 1 4.00 4 0 0 0 0 0 1 3 0 0 0 0
............................................................................................................................................................................TGGTGACCGTGATCCTCTTCCTGAATT................................................... 27 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TGGTGACCGTGATCCTCTTCCTGAA..................................................... 25 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TATGTAAATTGACGGATTTAAACTT.......... 25 0 1 4.00 4 2 1 1 0 0 0 0 0 0 0 0
......................................TCGACGAAAATGGTAAGGGTTCGGT........................................................................................................................................................................................... 25 0 1 4.00 4 2 1 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................TCCGCGAAGTCGACTTGAGTTGATG............................................................................ 25 0 1 4.00 4 2 2 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TTCCGCGAAGTCGACTTGAGTTGATGG........................................................................... 27 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0
..TTTGCATTCTGCTGTTTCTTCACC................................................................................................................................................................................................................................ 24 3 1 3.00 3 0 0 0 2 0 0 0 0 1 0 0
.........................................................................................................................................................................................................................TGTAAATTGACGGATTTAAACTTATC....... 26 0 1 3.00 3 2 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................TTCCTGAATTTTGTAGTCTTATGTAAAT.......................... 28 3 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0
.................................................................................................................TTCCTAAAAATACTGACCATAAAGA................................................................................................................ 25 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0
....................TCCAGCGCAACAGCAACATCGACGAAAA.......................................................................................................................................................................................................... 28 1 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0
.......................AGCGCAACAGCAACATCGACGAAAA.......................................................................................................................................................................................................... 25 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TTATGTAAATTGACGGATTTAAACTT.......... 26 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TTCCGCGAAGTCGACTTGAGTTGAT............................................................................. 25 0 1 3.00 3 1 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TCTTATGTAAATTGACGGATTTAAACTT.......... 28 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0
...............................................................................ACTGCCTCACCCTCTGCACCCCTGGA................................................................................................................................................. 26 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................AGTCGACTTGAGTTGATGGTGACCGTGA.................................................................. 28 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GGTGACCGTGATCCTCTTCCTGAATT................................................... 26 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
....TGCATTCTGCTGTTTCTTCACCG............................................................................................................................................................................................................................... 23 3 2 2.00 4 1 0 0 3 0 0 0 0 0 0 0
..............................................................................................................................................................TCGACTTGAGTTGATGGTGACCGTGA.................................................................. 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................GTCGACTTGAGTTGATGGTGACCGTGA.................................................................. 27 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................TTCCTAAAAATACTGACCATAAAGACGG............................................................................................................. 28 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TCCGCGAAGTCGACTTGAGTTGA.............................................................................. 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
............................AACAGCAACATCGACGAAAATGGTA..................................................................................................................................................................................................... 25 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TTCCGCGAAGTCGACTTGAGT................................................................................. 21 0 1 2.00 2 0 0 0 0 0 0 0 1 0 1 0
.....................................................................................................................TAAAAATACTGACCATAAAGA................................................................................................................ 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TCCTGAATTTTGTAGTCTTATGTAAAT.......................... 27 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TCTTATGTAAATTGACGGATTTAAAC............ 26 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
....................TTCAGCGCAACAGCAACATCGACGA............................................................................................................................................................................................................. 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................TACTGACCATAAAGACGGTGACGGG...................................................................................................... 25 0 1 2.00 2 0 0 1 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................................TTATGTAAATTGACGGATTTA............... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.......................AGCGCAACAGCAACATCGACGAAAATGGC...................................................................................................................................................................................................... 29 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TTATGTAAATTGACGGATTTAAAC............ 24 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0
.............................ACAGCAACATCGACGAAAATGGCA..................................................................................................................................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................TTCCTGAATTTTGTAGTCTTATGT.............................. 24 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................CGTGATCCTCTTCCTGAACTTTGAATT............................................ 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
........................................GACGAAAATGGTAAGGGTTCGGT........................................................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................TCCTGAATTTTGAATTTTGTAGTCTT.................................. 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................TATGTAAATTGACGGATTTAAACTTA......... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................CATTCCTAAAAATACTGACCATAAAGACGG............................................................................................................. 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TCCTTAATTTTGTAGTCTTATGTAAA........................... 26 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................ACCTTCAGCGCAACAGCAACATCGA................................................................................................................................................................................................................ 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....................TCAGCGCAACAGCAACATCGACGAA............................................................................................................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................TGAATTTTGTAGTCTTATGTAAATTGA....................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......................CAGCGCAACAGCAACATCGACGAAAA.......................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TCCTCGAAGTCGACTTGAGTTGATGGT.......................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................................................AAGGGTTCGGTCGCTTCTGCC................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TTTGTAGTCTTATGTAAATTGACGGATT................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TCCGCGAAGTCGACTTGAGTT................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
..................................................................................................................................................................CTTGAGTTGATGGTGACCGTG................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................ACGGGTTCCGCGAAGTCGACT...................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.....................TCAGCGCAACAGCAACATCGACGAAAAT......................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TTCCGCGAAGTCGACTTGAG.................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
...........................................................................................................................TACTGACCATAAAGACGGTGACGGGTTCCGC................................................................................................ 31 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................AGTCGACTTGAGTTGATGGTGACCG..................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................GTTGATGGTGACCGTGATAA............................................................... 20 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
.......................AGCGCAACAGCAACATCGACGAAAAT......................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................TCTTCCTGAATTTTGAATTTTGTAGTCT................................... 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................CCTGAATTTTGTAGTCTTATGTAAATT......................... 27 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TCCTGAATTTTGTAGTCTTATGTAAA........................... 26 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................CGCGAAGTCGACTTGAGTTGATGGTGAC....................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............................AGCAACATCGACGAAAATGGTA..................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TTGTAGTCTTATGTAAATTGA....................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................GTCGACTTGAGTTGATGGTGA........................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................CCGCGAAGTCGACTTGAGTTG............................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................TGTAAATTGACGGATTTAAACT........... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TTCCGCGAAGTCGACTTGAGTTGATGGT.......................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................ACGGGTTCCGCGAAGTC.......................................................................................... 17 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................TCGACTTGAGTTGATGGTGACCGTGAT................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................TATCTTCAGCGCAACAGCAACATCGAC............................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................TGGTGACCGTGATCCTCTTCCTGAAT.................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.............................................AAATGGTAAGGGTTCGGTC.......................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.......................AGCGCAACAGCAACATCGACGAAAATGGTA..................................................................................................................................................................................................... 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................ATCGACGAAAATGGTAAGGGTTCGGT........................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TTCTGAATTTTGTAGTCTTATGTAAAT.......................... 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................TGATCCTCTTCCTGAATTTTGTAGTCT.......................................... 27 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................CCATAAAGACGGTGACGGGTTCCGCGA.............................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................ACATTCCTAAAAATACTGACCATAAAGA................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................CGTGATCCTCTTCCTGAATT................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................TTTTGTAGTCTTATGTAAATTGACGGA................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..............TGTATCTTCAGCGCAACAGCAACA.................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1
................TACCTTCAGCGCAACAGCAACATCGA................................................................................................................................................................................................................ 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TGTAAATTGACGGATTTAAACTTAT........ 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
....................TTCAGCGCAACAGCAACATCGACGAAA........................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................TTCAGCGCAACAGCAACATCGACGAAAAT......................................................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................ACAGCAACATCGACGAAAATGGTAAGGGT................................................................................................................................................................................................ 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
....................TGCAGCGCAACAGCAACATCGACGAA............................................................................................................................................................................................................ 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................CGCGAAGTCGACTTGAGTTGATGGT.......................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................CTTCCTGAATTTTGAATT............................................ 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..................................................................TTCTGCCTCCGCCACTGCC..................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1
...............................AGCAACATCGACGAAAATGGTAAGGGT................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................GCAACATCGACGAAAA.......................................................................................................................................................................................................... 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TGTGGACCGTGATCCTCTTCCTGAACT................................................... 27 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................AATTGACGGATTTAAACTTATCTAAC... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................TCCAGCGCAACAGCAACATCGACGAA............................................................................................................................................................................................................ 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................ACCATAAAGACGGTGACGGGTTCCGCGAA............................................................................................. 29 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................TGACCATAAAGACGGTGACGGGTTC................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................CGCGAAGTCGACTTGAGTTGAT............................................................................. 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................ACGGGTTCCGCGAAGTCGAC....................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................CCATAAAGACGGTGACGGGTT.................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
...............................................................................................................................................ACGGGTTCCGCGAGGTCGACT...................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
......................................................................................................................................................................................................CCTGAATTTTGTAGTCTTATGTAAAT.......................... 26 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................ACAGCAACATCGACGAAAATGGTAAGGG................................................................................................................................................................................................. 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................CGCGCATTCGACTTGAGTTGA.............................................................................. 21 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...........................................................................CGCCACTGCCTCACCCTCTGCACCCCTGGA................................................................................................................................................. 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................TGACCATAAAGACGGTGACGGGT..................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................TGACCGTGATCCTCTTCCTGAATT................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TGGTGACCGTGATCCTCTTCCTGAACT................................................... 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................................CACTGCCTCACCCTCTGCACCCCTGGA................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................TGACCGTGATCCTCTTCCTGAATTTTGT............................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............................AGCAACATCGACGAAAATGGCACTG.................................................................................................................................................................................................. 25 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................ATTGACGGATTTAAACTTATC....... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
........................................................GTTCGATCCCTTCTGCCTCCACCA.......................................................................................................................................................................... 24 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
.....................................................................................................................................................TCCGCGAAGTCGACTTGAGTTGAT............................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................CCGCGAAGTCGACTTGAGTTGATGGT.......................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TCTTATGTAAATTGACGGATTTAA.............. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................ACCATAAAGACGGTGACGGG...................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................CACCCCTGGAAACAGACATTCCTAAAAA............................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................TCTTCAGCGCAACAGCAACATCGACGAAAA.......................................................................................................................................................................................................... 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......CATTCAGCTGTACCTTCAGCGCAACAGC........................................................................................................................................................................................................................ 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TTTGTAGTCTTATGTAAATTGA....................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TCCTAAAAATACTGACCATAAAGACGG............................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................TAAAAATACTGACCATAAAGACGG............................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................ACCATAAAGACGGTGACGGGTTCCGCGA.............................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................TAAATTGACGGATTTAAACTTATC....... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..TTTGCATTCTGCTGTTTCTTCA.................................................................................................................................................................................................................................. 22 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................AGTTGATCGTGACCG..................................................................... 15 1 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0
....................................................................................................................................................................................................TCTCTGAATTTTGTAGTCTTA................................. 21 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................CCCTGGAAAAAGACA......................................................................................................................................... 15 1 16 0.06 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................GGTTCCGCGACGTCGC........................................................................................ 16 2 18 0.06 1 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................GAATGGAACTTATCTAACC.. 19 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................................................GAACTGACCATAACGACG.............................................................................................................. 18 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................GAAGGCGACTTGAGT................................................................................. 15 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

GCAAACGTAAGTCGACATAGAAGTCGCGTTGTCGTTGTAGCTGCTTTTACCATTCCCAAGCCAGCGAAGACGGAGGCGGTGACGGAGTGGGAGACGTGGGGACCTTTGTCTGTAAGGATTTTTATGACTGGTATTTCTGCCACTGCCCAAGGCGCTTCAGCTGAACTCAACTACCACTGGCACTAGGAGAAGGACTTAAAACTTAAAACATCAGAATACATTTAACTGCCTAAATTTGAATAGATTGGTC
**************************************************************************..............(((((....(((..((.(((...)))))..)))....)).)))......***************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 M024
male body		 SRR902009
testis
 M053
female body
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 M023
head
 O001
Testis
 O002
Head
 SRR553488
RT_0-2 hours eggs
 SRR902008
ovaries
....................................................................................................................................................AAGGCGCTTCAGCTGAACTCA................................................................................. 21 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
....................................................TTCCCAAGCCAGCGAAGACGG................................................................................................................................................................................. 21 0 1 2.00 2 0 0 0 1 0 0 0 0 0 1 0 0
..........................................................................................................................................................................................GAGAAGGACTTAAAACTT.............................................. 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..AAACGTAAGACGACAAAGAAGT.................................................................................................................................................................................................................................. 22 2 2 1.00 2 0 0 0 0 1 1 0 0 0 0 0 0
.....................................................TCCCAAGCCAGCGAAGACGGAGGCGGT.......................................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................GTTGTAGCTGCTTTTACCATT.................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................CTTTGTCTGTAAGGATTTTTG.............................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................CTACCACTGGCACTAGGAGAA........................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.............................TGTCGTTGTAGCTGCTTTTAT........................................................................................................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................AGGATTTTTATGACTGGTATT................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............ACATGGAAGTCGCGTTGTCGT....................................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................TCAACTACCACTGTCGTTAGGA.............................................................. 22 3 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.CAAACGTAAGTCGACATAGAA.................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
GTAAACGTAAGACGACAAAGAAGT.................................................................................................................................................................................................................................. 24 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................TGCCACTGCCCAAGGCGCT.............................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................GCGCTTCAGCTGAACTCAACTACCAC......................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
............................TTGTCGTTGTAGCTGCTTTTA......................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
....................................GTAGCTGCTTTTACCATTCCCA................................................................................................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................CCCAAGGCGCTTCAGCTGAAC.................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................AGTGGGAGACGTGGGGACCTT................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................TGGGAGACGTGGGGACCTTT............................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..............TCATAGAAGTCGCGTTGTCGT....................................................................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................CTGCGAAGACCGAGACGGTGAC....................................................................................................................................................................... 22 3 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0
.TAAACGTAAGACGACAAAGAAGT.................................................................................................................................................................................................................................. 23 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0
..........................CGTTGTCATAGAAGCTGCTT............................................................................................................................................................................................................ 20 3 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................................AAAACTTAAAACATC...................................... 15 0 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0 0
.................................GTTGAAGCTGCTTTTAAC....................................................................................................................................................................................................... 18 2 11 0.09 1 0 0 0 0 0 1 0 0 0 0 0 0
.............................TGTCATTGAAGCTGCTTTGA......................................................................................................................................................................................................... 20 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 1
..........................................................................................................................................................................CTAGCAATGGCACTAGCAG............................................................. 19 3 18 0.06 1 0 0 0 0 0 0 0 0 0 0 1 0

Generated: 04/24/2015 at 04:23 AM