ID:

dsi_20670

 Coordinate:

2r:6789771-6789920 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.0 -2.3

Flybase annnotation

five_prime_UTR [2r_6787907_6790856_+]; exon [2r_6787907_6791192_+]

No Repeatable elements found

Sense Strand Reads

##########################################################################################################################################################################################################################################################
TTACATAATCACCGTTGCAAATCCAATTTTTTGGAAGCGAACCCCCACAAGTGCCCAATTGGAATGTCGAATATCTGACAGTGACCAAACAAACAGCGAAATCAGTCGAAACCAAACTCAATAGAGAACCCCAACTGCAGAAGGAAAGCAAGCGAAGTTGTTATCAGTGAAAATATACACACATATATATTCGATTTCAGCGTAAACAACTGCTATATAATGTCCGTCGCCATCTGACAGTGGTCCAAAC
*******************************************************************(((....((((..((.............))....))))))).................***************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M025
embryo
 M053
female body
 M023
head
 GSM343915
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 O001
Testis
...................................................................CGAATATCTGACAGTGACCAAAC................................................................................................................................................................ 23 0 1 7.00 7 0 7 0 0 0 0 0 0 0 0
...................................................................CGAATATCTGACAGTGACC.................................................................................................................................................................... 19 0 1 4.00 4 1 3 0 0 0 0 0 0 0 0
.................................................................GTCGAATATCTGACAGTGACC.................................................................................................................................................................... 21 0 1 3.00 3 1 1 0 1 0 0 0 0 0 0
...................................................................................................AATCAGTCGAAACCAAACTCAATAGA............................................................................................................................. 26 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TAATGTCCGTCGCCATCTGAC............ 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.....................................................................................CAAACAAACAGCGAAATCAGTCGA............................................................................................................................................. 24 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................................ATATAATGTCCGTCGCCATCTGAC............ 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGTCCGTCGCCATCTGACAGT......... 21 0 1 2.00 2 0 1 0 1 0 0 0 0 0 0
................................................................TGTCGAATATCTGACAGTGACCAAACA............................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
............................................................................................ACAGCGAAATCAGTCGAAAC.......................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................ATATATTCGATTTCAGCGTAAA............................................ 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TATATAATGTCCGTCGCCATCTGACAGT......... 28 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
......................................................................................................................................................................................................................ATATAATGTCCGTCGCCATCTGACAGT......... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................GACCAAACAAACAGCGAAATCAGT................................................................................................................................................ 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...........................................................TGGAATGTCGAATATCTGACAGTGAC..................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0
........................................................................................................................................................................................................................ATAATGTCCGTCGCCATCT............... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................GTCGAAACCAAACTCAATAGA............................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
........................................................................................ACAAACAGCGAAATCAGTCG.............................................................................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
........................................................................................................GTCGAAACCAAACTCAAT................................................................................................................................ 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................CCAACTGCAGAAGGAAAGCAAGC................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TATATAATGTCCGTCGCCATCTGAC............ 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.................CAAATCCAATTTTTTGGAAGC.................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................TTCGATTTCAGCGTAAACAACTGCT.................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
......................................................................ATATCTGACAGTGACCAAACAAACAGC......................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TGCTATATAATGTCCGTCGCC................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.......................................................CAATTGGAATGTCGAATATCT.............................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................GAAAGCAAGCGAAGTTGTT........................................................................................ 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TGCTATATAATGTCCGTCGCCAT................. 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................................................AGTGCCCAATTGGAATGTCGAATATC............................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...................................................................................................AATCAGTCGAAACCAA....................................................................................................................................... 16 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................TCAGCGTAAACAACTGCT.................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...............................................................................AGTGACCAAACAAACAGCGAAATCAGTC............................................................................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..............................................................AATGTCGAATATCTGACA.......................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................AATCAGTCGAAACCAAACTCAATAGAGA........................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................................AATTGGAATGTCGAATATCTGAC........................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........................................................AATTGGAATGTCGAATATCT.............................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................................AATATCTGACAGTGACCAAAC................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
....................................................................................................ATCAGTCGAAACCAAACTCAATAGAGA........................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................GTCGCCATCTGACAGTGGTC..... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................GAAAATATACACACATATA............................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1
..........................................................................................AAACAGCGAAATCAGTCGA............................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................TCGATTTCAGCGTAAACAACTG...................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................ATCTGACAGTGGTCCAAA. 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................................CTATATAATGTCCGTCGCC................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................AGGAAAGCAAGCGAAGTTGT......................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
....................................................................................................ATCAGTCGAAACCAAACTCAATAGA............................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................AGCGAAATCAGTCGAAACCAAACT.................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................AAGGAAAGCAAGCGAAGTT........................................................................................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
....................................................................................................ATCAGTCGAAACCAAACTC................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.TACATAATCACCGTTGCAAATCCAATT.............................................................................................................................................................................................................................. 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.......................................................................................................................................TGCAGAAGGAAAGCAAGC................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
.......................................................................................................................................................................................................................TATAATGTCCGTCGCCATCTGACAGG......... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................GCCCAATTGGAATGTCGAATATCTGA............................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CTATATAATGTCCGTCGCCATCTGACAGT......... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TAATGTCCGTCGCCATCTGG............. 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................AAGCAAGCGAAGTTGTTATCAGT.................................................................................. 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.........................................................................TCTGACAGCGACCATACAAA............................................................................................................................................................. 20 2 3 0.33 1 0 0 0 0 0 0 0 1 0 0
..............................TTTGAAGCGAACCCC............................................................................................................................................................................................................. 15 1 7 0.14 1 0 0 0 0 0 0 0 0 1 0
............................TTTGGGAAGCGAACC............................................................................................................................................................................................................... 15 1 8 0.13 1 0 0 0 0 0 0 0 0 1 0
......................................................................................................................................CAGGAGAAGGAAAGGAAGCGA............................................................................................... 21 3 10 0.10 1 0 0 0 0 0 0 0 1 0 0
.....TCATCACCGGTTCAAATCC.................................................................................................................................................................................................................................. 19 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...................................................................CGAATATCTGAGAGT........................................................................................................................................................................ 15 1 19 0.05 1 0 0 0 0 0 0 0 0 1 0
..........................................................TTGGAATGTTGAATA................................................................................................................................................................................. 15 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

AATGTATTAGTGGCAACGTTTAGGTTAAAAAACCTTCGCTTGGGGGTGTTCACGGGTTAACCTTACAGCTTATAGACTGTCACTGGTTTGTTTGTCGCTTTAGTCAGCTTTGGTTTGAGTTATCTCTTGGGGTTGACGTCTTCCTTTCGTTCGCTTCAACAATAGTCACTTTTATATGTGTGTATATATAAGCTAAAGTCGCATTTGTTGACGATATATTACAGGCAGCGGTAGACTGTCACCAGGTTTG
*****************************************************************************************************************************(((....((((..((.............))....))))))).................******************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
.........................................................................AGACTGTCAATGGTTT................................................................................................................................................................. 16 1 8 0.13 1 1 0 0 0
................................................................................................GCTTTAGTCAGCGATGG......................................................................................................................................... 17 2 8 0.13 1 0 1 0 0
AAGGTATTAGTGGCA........................................................................................................................................................................................................................................... 15 1 9 0.11 1 0 0 1 0
.................................................................................................................TTCGAGTTTTCTCTTGGGGG..................................................................................................................... 20 3 11 0.09 1 1 0 0 0
.........................................................................................................AGCTTTGGTTTGAAT.................................................................................................................................. 15 1 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:6789721-6789970 + dsi_20670 TT-----------------ACATAATC---ACCGTTGC-------AAATC-CAA----T---------------------------------------TTTTTGGAAGC-------------------------GAACCCCCACAAGTGCCC-------------------AATTGGAATG---TCGAATATCTGACAGTGACCAAACAAACAGCG---------------------------------------AAATC--------------------A-------GT------CGAAAC-----------------------------------CAAACTCAA--------TAG---AGAA----C--------------------------------------------CC-CAA------------------------------------------------------------------------------CTGCAGAAGGAAAGCAAGCGAA----------G----TTGTTATCAGTGAAAATATA--CACACAT----A---------TATATTCGAT--TTC-----AGCGT--------AAACAACTGC-----TATATAATGTCCGTCGCCATCTGACAGTGGTC----------CAAA-C
droSec2 scaffold_1:3629378-3629621 + TT-----------------ACATAATC---ACCGTTGC-------AA--------------------------------T------------------TTTTTGGAAGC-------------------------GAACCCCCAAAAGTGCCC-------------------AATTGGAATG---CCGAATATCTGACAGTGACCAAACAAACAGCG---------------------------------------AAATC--------------------A-------GT------CGAAAC-----------------------------------CAAAGTCAA--------AAG---AGAA----C--------------------------------------------CC-CAA------------------------------------------------------------------------------CTGCAGATGGAAAGCAAGCGAA----------G----TTGTTATCAGTGAAAATATA--CACACAT----A---------TATATTCGAT--TCC-----AGCGT--------AAACAACTGC-----TATATAATGTCCGTCGCCATCTGACAGTGGTC----------CAAA-C
dm3 chr2R:6013565-6013817 + TT-----------------ACATAATC---ACCGTTGC-------AAATC-CAA----T------------------TTT------------------TTTTTGGAAGC-------------------------GAACCCCCAAAAGTGCCC-------------------AATTGGAATG---TCGAATATCTGACAGTGACCAAACAAACAGCG---------------------------------------AAATC--------------------A-------GT------CGAAAC-----------------------------------CAAACTCAA--------GAG---AGAA----C--------------------------------------------CC-CAA------------------------------------------------------------------------------CTGCAGAAGGAAAGCGAGCGAA----------G----TTGTTATCAGTGAAAATATA--CACACAT----A---------TATATTCGAT--TTC-----AGCGT--------AAACAACTAC-----TATATAATGTCCGTCGCCATCTGACAGTGGTC----------CAAA-C
droEre2 scaffold_4929:8357452-8357707 - TT-----------------ACATAATC---GCCGTTGC-------AAATC-CAA----T-------------------TT------------------TTTTTGGAAAA-------------------------GAACCCCCAAAAGTGCCC-------------------AATTGGAATG---TCAAATATCTGACAGTGACCAAATAAACAGCG---------------------------------------AAATT--------------------A-------GT------CGAAAC-----------------------------------CAAACTCAA--------AAG---CGAA----C--------------------------------------------CAACAA------------------------------------------------------------------------------CTGCAGAAGGAAAGCAAGCGAA----------G-T--CTGTTATCAGTGAA-ATATA--CACACAT----AC----A--ATATATTGGAT--TTC-----AGCGT--------AAACAACTGC-----TATATAATGTCCGTCGCCATCTGACAGTGGTC----------CAAA-C
droYak3 2L:18646485-18646732 + TT-----------------ACATAATC---GCCGT-GT-------AAATC-CAA----T--------------------T------------------TTTTTGGAAAC-------------------------GAACCCCCACAAGTGCCC-------------------AATTGGAATG---TCGAATATCTGACAGCGACCAAACAAACAGCG---------------------------------------AAATC--------------------A-------GT------CGAAGC-----------------------------------CAAACTCAA--------AAG---GGAA----C--------------------------------------------C---AA------------------------------------------------------------------------------CTGCAGAAGGAAAGCAAGCGCA----------G-C--CTGTTATCAGTGAA-ATATA--CACACAT----A---------TATATTCGAT--TTC-----AGCGT--------AAACAACTGC-----TATATAATGTCCGTCGCCATCTGACAGTGGTC----------CAAA-C
droEug1 scf7180000409209:167010-167275 - TT-----------------ACATAACC---AGCATTGA-------AAATC-TGA----A---------------------------------------ATTTTGGAAGC-------------------------GAAGCCCCAAAAGTGTCC-ACT---GATTTAACTGCTAATTGGAATG---TCGCATATCTGACAGTGACTAAACAAACACCA---------------------------------------CAACC-------------------AA-------ATCCAAATCGAAAC-----------------------------------AAG---CAA-----GAAACG---AGAA----C--------------------------------------------TA-AAA--CTCCGT------------------------------------------------------------------------------GGAAAGCAA-----C--ACA-TAAG-C--CTGTTATCAGTGAA-ATATA--TA-------------------CATATTCGAT--TCC-----AGCGT--------AAACAACTGC-----TATATAATGTCCGTCGCCATCTGACAGTGGTC----------CAAA-C
droBia1 scf7180000301754:319050-319365 - TT-----------------ACATAACC---AACTTTAA-------ATATC-CAGTCGAACA----------------TTT------------------TTTTTGGAACC-------------------------GAAACCCCACAAGTGTCC-CCA---GCTTTAACTGCTAATTGGAATG---GCGCGTATCTGACAGTGACCAAATAAACAACGAA-AA--GCT----------------------------------------ACCCCC--GAAATAG-------GT------CCGTAG-----------------------------------AGAACTCAA--------A--CAGCGAACTAACT--------------------TC--AAAAGCGTCGTGAGCAAAT--------CGCCCG------------------------------------------------------------------------------GGAAAACCA-----C--CGA-GAAGCCCTGAGTTATCAGTGAT-ATAGT--CA--CTTACTTAT----A----ATATTCGAT--TCC-----AGCGT--------AAACAACTGC-----TATATAATGTCCGTCGCCATCTGACAGTGGTC----------CAAA-G
droTak1 scf7180000415363:217360-217674 - TT-----------------ACATAACC---AACGTTGA-------AAATACCAA----T--------------------T------------------TTTTTGGAAGC-------------------------GAAACCCCACAAGTGTCCCATA---GCTTTAACTGCTAATTGGAATG---TCGCATATCTGACAGTGACTAAATAAACACCAAA-AA--GCA----------------------------------------ACCCCC--GAAATAAAACCGAAAT------CCAAAA-----------------------------------AGAACTCAA--------G--CAGAGAAATAACT--------------------TA--AAAAGCGTCGTAAGCGAAT--------CGCCCA------------------------------------------------------------------------------GGAAAACAA-----C--CGA-GAAG-CCTGTGTTATCAGTGAA-ATATT--CACATAT----AT----A---GACATTCGAT--TCC-----AGCGT--------AAACAACTGC-----TATATAATGTCCATCGCCATCTGACAGTGGTC----------CAAA-C
droEle1 scf7180000491258:209057-209364 + CT-----------------ATATAG-C---ACCATTGA-------TAATC-C--------------------------------------------TATTTTTGGAATC-------------------------GAACCCCTACAAGTGTCC-ACA---GCTTTAACTGCTAATTGGAATGTTGTCGCATATCTGACAGTGACTAAATAAACACCAAA-AA--GCA----------------------------------------ACCCCC---AAATAA-------AT------CCAAAC---------------------------------GGAAAACTCGA--------AAGCAGAGAA----CT--------------------TC--AAAAGCATTGTGAGGAAAT--------CGCCTA------------------------------------------------------------------------------GGAAAACAG-----T--CGC-GAAG-CCTGTGCTATCAGTAAA-ACATATAT--ATAT----ATATACA----ATATTCGAT--TCC-----AGCGT--------AAACAACTGC-----TATATAATGTCCGTCGCCATCTGACAGTGGTC----------CAAA-C
droRho1 scf7180000774573:44213-44491 - TT-----------------ATATAAT-----------------------C-C--------------------------------------------CATTTTCGGAAGC-------------------------GAAACCCTACAAGTGTCC-ACG---GCTTAAACTGCTAATTGGAATGTTGTCTCATATCTGACAGTGACTAAATAAACACCAAA-AA--GCA----------------------------------------ACCCCA--AAAATAA-------AT------CCAACC-----------------------------------AGAACTCGA--------AAA---AGAA----CT--------------------TC--GAAAGCGTCGGGAGGAAAT--------CGCCCA------------------------------------------------------------------------------GGAAAACAA-----C------AAAG-CCTCTGTTATCAGTGAA-ATATA--CA--------------------ATATTCGATTTTCA-----AGCGT--------AAACAACTGC-----TGTATAATGTCCGTCGCCATCTGACAGTGGTC----------CAAA-C
droFic1 scf7180000454066:1718184-1718494 - GAAAGGAAACCCCAAGGTTACATAAT-----------------------A-C--------------------------------------------CATTTTCGGAAGC-------------------------GAAACACCACAAGTGCCC-ACA---GCTTTAACTGCTAATTGGAATG---TCGCATATCTGACAGTGACTAAACAGACACCGAAAAA--TCA----------------------------------------ACCCCCCAAAAATAA-------GT------CCAAGC-----------------------------------TGAACTCAA--------AAA-AGAGAA----CT--------------------TC--AAAAGCGTCGTGAGGAAAT--------CGCCCA-------------------------------------------------------------------------------GAAAACAG-----CGTCTACAAAG-C--CTGTTATCAGTGAC-ATATT--TA--AATACATAT-------ATACATTCGAT--TCC-----AGCGT--------AAACAACTGC-----TATATAATGTCCGTCGCCATCTGACAGTGGTC----------AAAAAC
droKik1 scf7180000302817:340434-340781 + TT-----------------ACATAACGCATAACGTGGA-------AAATC-C--------------------------------------------TATTTTCGGAAGCGAAATATAAGCAAGAGAGACCCAGCGAAACCCTCCAAGTGAC---------------TTGTTAATTGGAATG---TCGCCTATCTGACAGTGACTAAATCAACACGAAA-AAAAA-------------------------------------------CACCCCAAAAATAA-------CT------CAAA--------------------------------------------------------------AA----C---------------------------------------------------ACTA--TTTGAAAATAAAAAGAATAAATTGGAGCGTCACTACAGCGTTACAACAGCGAAAGAAATAATATCAGCCAACA-----AGG------AGTGCA----------G-CCTGTGTTATCAGTGAA-GCATACGT--ACAT----ACATACT-GATATATTCGAT--TCA-----AGCGT--------AAACAACTGC-----TGTATAATGTTCACCGCCATCTGACAGTGGTC----------CAAA--
droAna3 scaffold_13266:4483255-4483542 + TT-----------------ACATAACC---AGCATTGA----AAAAAATC-G--------------------------------------------TATTTTCGGAAG------------------------------CCCTACAAGTTTTTTGGAGCTAGTGGAACTGCTAATTGAAATG---TCGAATATCTGACAGTGACTCAATAAACACCA---------------------------------------ACAACAATACAACAC-T--GAAAAAA-----------------------------------------------------------ACCCAA--------AA-----------------------------AAATATAAAAAA--------------------T--ACTA------------------------------------------------------------TATTATC----AACA---GA--A------GCCGTA-------------AGGAGTTATCAGCGAG-GGAGA--AA--AAT----------A----ATATTCAAT--TGA-----AGCGT--------AAACAACTCCATATATATATAATGTCCGACGCCATCTGACAGTGTCCACTAGAACTACATA-C
droBip1 scf7180000395751:290758-291066 + TT-----------------ACATAACC---ATTGTTGGATTGAAAAAATC-C--------------------------------------------TATTTTCGGAAG------------------------------CCCCACAAGTTTCG---------------AGCTAATTGAAATG---TCGCATATCTGACAGTGACTCAATAAATAAAAAA-AA--A-----------------------------------------------------------------T------ATAA-------------------------------------AAAGCCCAA--------AAGCTAAGAACTAGCTAATCGCCACAAAATAAAATATAAAAAAAACGTCACAAGGAAAC--------CTACT----------------------------------------------------------TACTATCAG----TAGCAGGAGGAGTGCAG---CA-GTCTG--TTG-C--CTGTTATCAGTGAA-GGGAA-----------------------AAAATTCAAT--TGA-----AGCGT--------AAACAACTCC-----TATATGATGTCCGACGCCATCTGACAGTGTCCAC--------CAAG-C
dp5 3:6863398-6863713 + TA-----------------ACATT-------------------------------------------------------TTTTTCGTGGAAGAAGCCATATTCCATA--------------------------------CCCCAAAGTCA----------------GCGTTAATTAGAATG---TCGCATATTTCACAGTGACAAAAGC---ACAGAT-AT--TCTCCCCCACACTCATAAAATTTTCTGAATCGAGTTG--------------------A-------GT------CGAGTCGAGTCCGAGTGTAAACGCTAGGAAATTTGAGACG--------AAAAG-AGAA---------ACGAACAGATCGGTACG----------------------------------AACAAA----------------GG-------------------------------------CAGAGCGAGTATTTTC----CACA-----GGG------AGTGCA-------------CTCTGTTATCAGTGAA-GAAAA---------------------------AGCAAT--TCG-----CGAGT--------AAACAACTGC-----TGTATAATGTCA---GCCATCTGACAGTGAGC----------GAAA-C
droPer2 scaffold_2:7064707-7065023 + TA-----------------ACATT-------------------------------------------------------TTTTTCGTGGAAGAAGCCATATTCCGTA--------------------------------CCCCAAAGTCA----------------GCGTTAATTAGAATG---TCGCATATTTCACAGTGACAAAAGC---ACAGAT-AT--TCTCCCCCACACTCATAAAATTTTCTGAATCGAGTTG--------------------A-------GT------CGAGTCGAGTCCGAGTGTAAACGCTAGGAAATTTGAGACG--------AAAAAAAAAA---------ACGAGCAGATCGGTACG----------------------------------AACAAA----------------GC-------------------------------------CAGAGCGAGTATTTTC----CACA-----GGG------AGTGCA-------------CTCTGTTATCAGTGAA-GAAAA---------------------------AGCAAT--TCG-----CGAGT--------AAACAACTGC-----TGTATAATGTCA---GCCATCTGACAGTGAGC----------GAAA-C
droWil2 scf2_1100000004382:81768-81959 - CT-----------------A--------------------------------------------------------------------------------------------------------------------------------------------------------ATTAATATG---TCAAAAATCTGACAGTGACTCAAATAAAAAAAAA-TAGAG-------------------------------CAACA--------------------T-------AT------TGAAAC-----------------------------------CAAA--------------------AAA----CT-----------------------------------------------------TTAT-----------------------------------------------------------------------------------GCAAACACA----------A-A--TTGTTT-----GCAAATTTT--CAAATAT----AT----TTTATATATT--TT--TCTTGTGAAGCGTTAAGCTAAAAAATATTGC-------TAGAATGTCAGCCCAAATCTGACAGTGACT----------TTAACC
droVir3 scaffold_12875:15850425-15850563 + TAATACAAAAACCTTA----------------CA-TAA-----GAAAATC-A------AAATATATAAGTGAGGTCG------------------------TACAAG--------------------------------TGCCAAAA--ACA-ATT---GCTTTGCCGCCTAATAAGAATG---TCAAATATCTGACACACAATAATTAAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCACTCGACAAG-CAG----------CAAA-A

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TT-----------------ACATAATC---ACCGTTGC-------AAATC-CAA----T---------------------------------------TTTTTGGAAGC-------------------------GAACCCCCACAAGTGCCC-------------------AATTGGAATG---TCGAATATCTGACAGTGACCAAACAAACAGCG---------------------------------------AAATC--------------------A-------GT------CGAAAC-----------------------------------CAAACTCAA--------TAG---AGAA----C--------------------------------------------CC-CAA------------------------------------------------------------------------------CTGCAGAAGGAAAGCAAGCGAA----------G----TTGTTATCAGTGAAAATATA--CACACAT----A---------TATATTCGAT--TTC-----AGCGT--------AAACAACTGC-----TATATAATGTCCGTCGCCATCTGACAGTGGTC----------CAAA-CSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................CGAATATCTGACAGTGACCAAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2317.00700700000000000000
.........................................................................................................................................................................................CGAATATCTGACAGTGACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.00401300000000000000
....................................................................................................................................................................................G---TCGAATATCTGACAGTGACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.00311100000000000000
................................................................................................................................................................................................................................................................AATC--------------------A-------GT------CGAAAC-----------------------------------CAAACTCAA--------TAG---A........................................................................................................................................................................................................................................................................................................................2613.00302100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGTCCGTCGCCATCTGAC.......................2112.00202000000000000000
...........................................................................................................................................................................................................CAAACAAACAGCG---------------------------------------AAATC--------------------A-------GT------CGA......................................................................................................................................................................................................................................................................................................................................................................................2412.00201000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATAATGTCCGTCGCCATCTGAC.......................2412.00202000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCGTCGCCATCTGACAGT....................2112.00210100000000000000
...................................................................................................................................................................................TG---TCGAATATCTGACAGTGACCAAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000100000000
..................................................................................................................................................................................................................ACAGCG---------------------------------------AAATC--------------------A-------GT------CGAAAC-----------------------------------................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------TATATTCGAT--TTC-----AGCGT--------AAA............................................................2211.00100010000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATAATGTCCGTCGCCATCTGACAGT....................2811.00100000000100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATAATGTCCGTCGCCATCTGACAGT....................2711.00101000000000000000
........................................................................................................................................................................................................GACCAAACAAACAGCG---------------------------------------AAATC--------------------A-------GT------.........................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
..............................................................................................................................................................................TGGAATG---TCGAATATCTGACAGTGAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000010000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATGTCCGTCGCCATCT..........................1911.00101000000000000000
................................................................................................................................................................................................................................................................................................GT------CGAAAC-----------------------------------CAAACTCAA--------TAG---A........................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
..............................................................................................................................................................................................................ACAAACAGCG---------------------------------------AAATC--------------------A-------GT------CG.......................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
................................................................................................................................................................................................................................................................................................GT------CGAAAC-----------------------------------CAAACTCAA--------T..............................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................C-CAA------------------------------------------------------------------------------CTGCAGAAGGAAAGCAAGC.............................................................................................................................................................2311.00101000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATAATGTCCGTCGCCATCTGAC.......................2511.00100000010000000000
.....................................C-------AAATC-CAA----T---------------------------------------TTTTTGGAAGC-------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGAT--TTC-----AGCGT--------AAACAACTGC-----T...............................................2511.00100010000000000000
............................................................................................................................................................................................ATATCTGACAGTGACCAAACAAACAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGC-----TATATAATGTCCGTCGCC..............................2111.00110000000000000000
.......................................................................................................................................................C-------------------AATTGGAATG---TCGAATATCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGCAAGCGAA----------G----TTGTT......................................................................................................................................1911.00100010000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGC-----TATATAATGTCCGTCGCCAT............................2311.00110000000000000000
.................................................................................................................................................AGTGCCC-------------------AATTGGAATG---TCGAATATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
................................................................................................................................................................................................................................................................AATC--------------------A-------GT------CGAAAC-----------------------------------CAA.............................................................................................................................................................................................................................................................................................................................................1611.00100000010000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-----AGCGT--------AAACAACTGC-----T...............................................1811.00100010000000000000
.....................................................................................................................................................................................................AGTGACCAAACAAACAGCG---------------------------------------AAATC--------------------A-------GT------C........................................................................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
.................................................................................................................................................................................AATG---TCGAATATCTGACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
................................................................................................................................................................................................................................................................AATC--------------------A-------GT------CGAAAC-----------------------------------CAAACTCAA--------TAG---AGA......................................................................................................................................................................................................................................................................................................................2811.00101000000000000000
...........................................................................................................................................................................AATTGGAATG---TCGAATATCTGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
...........................................................................................................................................................................AATTGGAATG---TCGAATATCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
...........................................................................................................................................................................................AATATCTGACAGTGACCAAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
.................................................................................................................................................................................................................................................................ATC--------------------A-------GT------CGAAAC-----------------------------------CAAACTCAA--------TAG---AGA......................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGCCATCTGACAGTGGTC----------......2011.00110000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAATATA--CACACAT----A---------TA..............................................................................................1911.00100001000000000000
................................................................................................................................................................................................................AAACAGCG---------------------------------------AAATC--------------------A-------GT------CGA......................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAT--TTC-----AGCGT--------AAACAACTG......................................................2211.00100010000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGACAGTGGTC----------CAAA-.1811.00100000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-----TATATAATGTCCGTCGCC..............................1911.00101000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAAAGCAAGCGAA----------G----TTGT.......................................................................................................................................2011.00100010000000000000
.................................................................................................................................................................................................................................................................ATC--------------------A-------GT------CGAAAC-----------------------------------CAAACTCAA--------TAG---A........................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
....................................................................................................................................................................................................................AGCG---------------------------------------AAATC--------------------A-------GT------CGAAAC-----------------------------------CAAACT..........................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAAAGCAAGCGAA----------G----TT.........................................................................................................................................1911.00100000000000100000
.................................................................................................................................................................................................................................................................ATC--------------------A-------GT------CGAAAC-----------------------------------CAAACTC.........................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
.T-----------------ACATAATC---ACCGTTGC-------AAATC-CAA----T---------------------------------------T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGAAGGAAAGCAAGC.............................................................................................................................................................1811.00100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAATGTCCGTCGCCATCTGACAGG....................2611.00101000000000000000
....................................................................................................................................................GCCC-------------------AATTGGAATG---TCGAATATCTGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-----TATATAATGTCCGTCGCCATCTGACAGT....................2911.00101000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGTCCGTCGCCATCTGG........................2011.00110000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCAAGCGAA----------G----TTGTTATCAGT................................................................................................................................2311.00100010000000000000
droSec2
TT-----------------ACATAATC---ACCGTTGC-------AA--------------------------------T------------------TTTTTGGAAGC-------------------------GAACCCCCAAAAGTGCCC-------------------AATTGGAATG---CCGAATATCTGACAGTGACCAAACAAACAGCG---------------------------------------AAATC--------------------A-------GT------CGAAAC-----------------------------------CAAAGTCAA--------AAG---AGAA----C--------------------------------------------CC-CAA------------------------------------------------------------------------------CTGCAGATGGAAAGCAAGCGAA----------G----TTGTTATCAGTGAAAATATA--CACACAT----A---------TATATTCGAT--TCC-----AGCGT--------AAACAACTGC-----TATATAATGTCCGTCGCCATCTGACAGTGGTC----------CAAA-CSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAT--TCC-----AGCGT--------AAACAAC........................................................2011.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................................................AA------------------------------------------------------------------------------CTGCAGATGGAAAGCAA...............................................................................................................................................................1911.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................CAA------------------------------------------------------------------------------CTGCAGATGGAAAGCAAGC.............................................................................................................................................................2211.0010100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGGAAAGCAAGCGAA----------G----TTGT.......................................................................................................................................2311.0010100
.........................................................................................................................................................................................................................................................................................................................................................................GAA----C--------------------------------------------CC-CAA------------------------------------------------------------------------------CTGCAGATGGAAAGCA................................................................................................................................................................2511.0010100
.................................................................................................................................................................................................................................................................................................................................................................................................................................AA------------------------------------------------------------------------------CTGCAGATGGAAAGCAAGCGAA----------G----TT.........................................................................................................................................2711.0010010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTCCGTCGCCATCTGACAGT....................2311.0010010
..................................................................................................................................................GTGCCC-------------------AATTGGAATG---CC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
..........................................................................................................................................................................................GAATATCTGACAGTGACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
..............................ACCGTTGC-------AA--------------------------------T------------------TTTTTGGAAGC-------------------------G..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
..........................C---ACCGTTGC-------AA--------------------------------T------------------TTTTTGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
..............................................................................................................................................AAAAGTGCCC-------------------AATTGGAATG---CC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
....................................................................................................................................................................................................................................................................................................................................................................G---AGAA----C--------------------------------------------CC-CAA------------------------------------------------------------------------------CTGCAGAT........................................................................................................................................................................1911.0010100
..............................................................................................................................................................................................................ACAAACAGCG---------------------------------------AAATC--------------------A-------GT------CGAAAC-----------------------------------C...............................................................................................................................................................................................................................................................................................................................................2511.0010100
.............................................................................................................................................................................................................AACAAACAGCG---------------------------------------AAATC--------------------A-------GT------.........................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAA----------G----TTGTTATCAGTGAAAATA.........................................................................................................................2311.0010010
.....................................................................................................................................................................................................................GCG---------------------------------------AAATC--------------------A-------GT------CGAAAC-----------------------------------CA..............................................................................................................................................................................................................................................................................................................................................1911.0010010
................................................................................................................................................................................................................................................................................................GT------CGAAAC-----------------------------------CAAAGTCAA--------AAG---A........................................................................................................................................................................................................................................................................................................................2111.0010010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCGAT--TCC-----AGCGT--------AAAC...........................................................2111.0010100
................................................................................................................................................................................GAATG---CCGAATATCTGACAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
................................................................................................................................................................................................CTGACAGTGACCAAACAAACAGCG---------------------------------------AA................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAAGCAAGCGAA----------G----TTGTT......................................................................................................................................2011.0011000
dm3
TT-----------------ACATAATC---ACCGTTGC-------AAATC-CAA----T------------------TTT------------------TTTTTGGAAGC-------------------------GAACCCCCAAAAGTGCCC-------------------AATTGGAATG---TCGAATATCTGACAGTGACCAAACAAACAGCG---------------------------------------AAATC--------------------A-------GT------CGAAAC-----------------------------------CAAACTCAA--------GAG---AGAA----C--------------------------------------------CC-CAA------------------------------------------------------------------------------CTGCAGAAGGAAAGCGAGCGAA----------G----TTGTTATCAGTGAAAATATA--CACACAT----A---------TATATTCGAT--TTC-----AGCGT--------AAACAACTAC-----TATATAATGTCCGTCGCCATCTGACAGTGGTC----------CAAA-CSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................TATCTGACAGTGACCAAACAAACAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2617.0070000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................AA------------------------------------------------------------------------------CTGCAGAAGGAAAGCGAGC.............................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................C-------------------------GAACCCCCAAAAGTGCCC-------------------AAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAAAGCGAGCGAA----------G----TTGTTATA...................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................GCCC-------------------AATTGGAATG---TCGAATATCTGACAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................AGTGCCC-------------------AATTGGAATG---TC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................TCAA--------GAG---AGAA----C--------------------------------------------CC-CAA------------------------------------------------------------------------------CTGC............................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................AAAGTGCCC-------------------AATTGGAATG---TCGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................ACCAAACAAACAGCG---------------------------------------AAATC--------------------A-------.................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................GAA----C--------------------------------------------CC-CAA------------------------------------------------------------------------------CTGCAGAAGGAAAGC.................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000000
.............................................................................................................................................................................TTGGAATG---TCGAATATCTGACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................AACAGCG---------------------------------------AAATC--------------------A-------GT------CGAAAC-----------------------------------................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................AATTGGAATG---TCGAATATCTGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................GC-------------------------GAACCCCCAAAAGTGCCC-------------------AATT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................AAACAGCG---------------------------------------AAATC--------------------A-------GT------CGAAAC-----------------------------------................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................TC--------------------A-------GT------CGAAAC-----------------------------------CAAACTCAA--------GAG---AGA......................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................ATC--------------------A-------GT------CGAAAC-----------------------------------CAAACTCAA--------GAG---.........................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................TCAA--------GAG---AGAA----C--------------------------------------------CC-CAA------------------------------------------------------------------------------CTGCA...........................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................TGCCC-------------------AATTGGAATG---TCGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000000000000
................................................................................................................................................AAGTGCCC-------------------AATTGGAATG---TC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGAGCGAA----------G----TTGTTATC...................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................AG---AGAA----C--------------------------------------------CC-CAA------------------------------------------------------------------------------CTGCAGAAG.......................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TTTGGAAGC-------------------------GAACCCCCAAAAGTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................................CGAAAC-----------------------------------CAAACTCAA--------GAG---AGA......................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGCCATCTGACAGTGGTC----------......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGCGAA----------G----TTGTTATCAG.................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.............................................................................TTT------------------TTTTTGGAAGC-------------------------GAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................AAGTGCCC-------------------AATTGGAATG---TCGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................AGTGCCC-------------------AATTGGAATG---TCGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
...........................................................................................................................................................................AATTGGAATG---TCGAATATCTGACAGTGAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGT--------AAACAACTAC-----TATATAATGTCCGT..................................2711.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................CAA------------------------------------------------------------------------------CTGCAGAAGGAAAGCGAG..............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCCGTCGCCATCTGACAGTGG..................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..................................................................................................................................................GTGCCC-------------------AATTGGAATG---TCGAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTCGCCATCTGACAGTGGT.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------------------------------------------------------CTGCAGAAGGAAAGCGAG..............................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.T-----------------ACATAATC---ACCGTTGC-------AAATC-CA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
....................................................................................................................................................................................................CAGTGACCAAACAAACAGCG---------------------------------------AAATC--------------------.........................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................TCAA--------GAG---AGAA----C--------------------------------------------CC-CAA------------------------------------------------------------------------------CTGCAGAA........................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droEre2
TT-----------------ACATAATC---GCCGTTGC-------AAATC-CAA----T-------------------TT------------------TTTTTGGAAAA-------------------------GAACCCCCAAAAGTGCCC-------------------AATTGGAATG---TCAAATATCTGACAGTGACCAAATAAACAGCG---------------------------------------AAATT--------------------A-------GT------CGAAAC-----------------------------------CAAACTCAA--------AAG---CGAA----C--------------------------------------------CAACAA------------------------------------------------------------------------------CTGCAGAAGGAAAGCAAGCGAA----------G-T--CTGTTATCAGTGAA-ATATA--CACACAT----AC----A--ATATATTGGAT--TTC-----AGCGT--------AAACAACTGC-----TATATAATGTCCGTCGCCATCTGACAGTGGTC----------CAAA-CSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................................................................................................................................AGTGCCC-------------------AATTGGAATG---TC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030001110
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATAATGTCCGTCGCCATCTGACAG.....................2612.0022000000
................................................................................................................................................AAGTGCCC-------------------AATTGGAATG---TC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000020
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGGAAAGCAAGCGAA----------G-T--CTG........................................................................................................................................2311.0010001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGAA----------G-T--CTGTTATCAGT................................................................................................................................2011.0010000010
.......................AATC---GCCGTTGC-------AAATC-C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000
................................................................................................................................................................................................................................................................AATT--------------------A-------GT------CGAAAC-----------------------------------CAAACTCA........................................................................................................................................................................................................................................................................................................................................2111.0010100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGCGAA----------G-T--CTGTTATCAGT................................................................................................................................2211.0010000010
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...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGGAT--TTC-----AGCGT--------AAACAACTGC-----T...............................................2711.0010000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................AACAA------------------------------------------------------------------------------CTGCAGAAGGAAAGC.................................................................................................................................................................2011.0010000010
.........................................................................................................................................................................................................................................................................................................................................................................GAA----C--------------------------------------------CAACAA------------------------------------------------------------------------------CTGCAGAAGGAAAGC.................................................................................................................................................................2511.0010000100
................................................................................................................................................................................................................................................................AATT--------------------A-------GT------CGAAAC-----------------------------------CAAACTC.........................................................................................................................................................................................................................................................................................................................................2011.0010100000
....................................................................................................................................................................................................................AGCG---------------------------------------AAATT--------------------A-------GT------CGAAAC-----------------------------------CAAACTCAG--------...............................................................................................................................................................................................................................................................................................................................2711.0010000100
..................................................................................................................................................GTGCCC-------------------AATTGGAATG---TC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
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...........................................................................................................................................................................................................CAAATAAACAGCG---------------------------------------AAATT--------------------A-------GT------CGA......................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
.........................................................................................................................................................................................CAAATATCTGACAGTGACCAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
...................ACATAATC---GCCGTTGC-------AAATC-C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
.................................................................................................................................................................................................TGACAGTGACCAAATAAACAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
..................................................................................................................................................................................................................................................................................................................................................AAACTCAA--------AAG---CGAA----C--------------------------------------------CAACAA------------------------------------------------------------------------------CT..............................................................................................................................................................................2411.0010000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................CAACAA------------------------------------------------------------------------------CTGCAGAAGGAAAGCAAGC.............................................................................................................................................................2511.0010000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGC-----TATATAATGTCCGTC.................................2111.0010000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATAATGTCCGTCGCCATCTGACAGC....................2711.0010100000
......................................................................................................................................GAACCCCCAAAAGTGCCC-------------------A.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
...............................................................................................................................................................................................................TAAACAGCG---------------------------------------AAATT--------------------A-------GT------CGAAAC-----------------------------------CAAACT..........................................................................................................................................................................................................................................................................................................................................2911.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCGAA----------G-T--CTGTTATCAGTGAA-............................................................................................................................2411.0010000100
..................................................................................................................................................GTGCCC-------------------AATTGGAATG---TCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACTGC-----TATATAATGTCCGTCGCCA.............................2711.0011000000
..................................................................................................................................................................................................................................................................TT--------------------A-------GT------CGAAAC-----------------------------------CAAACTCAA--------AAG---CGAA----C--------------------------------------------C...................................................................................................................................................................................................................................................................2911.0011000000
........................................................................................................................................................................................TCAAATATCTGACAGTGACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000
.......................................................................................................................................................................................................................................................................................................................................................CAA--------AAG---CGAA----C--------------------------------------------CAACAA------------------------------------------------------------------------------CTGC............................................................................................................................................................................2111.0010000010
................................................................................................................................................................................................................AAACAGCG---------------------------------------AAATT--------------------A-------GT------CGAAAC-----------------------------------C...............................................................................................................................................................................................................................................................................................................................................2311.0010000010
.....................ATAATC---GCCGTTGC-------AAATC-CA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAT--TTC-----AGCGT--------AAACAAC........................................................1811.0010000010
......................................................................................................................................GAACCCCCAAAAGTGCCC-------------------AATTGGAATG---T........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000100
....................................................................................................................................................................................................................AGCG---------------------------------------AAATT--------------------A-------GT------CGAAAC-----------------------------------CAAACT..........................................................................................................................................................................................................................................................................................................................................2411.0010000010
.T-----------------ACATAATC---GCCGTTGC-------AAATC-CA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
droYak3
TT-----------------ACATAATC---GCCGT-GT-------AAATC-CAA----T--------------------T------------------TTTTTGGAAAC-------------------------GAACCCCCACAAGTGCCC-------------------AATTGGAATG---TCGAATATCTGACAGCGACCAAACAAACAGCG---------------------------------------AAATC--------------------A-------GT------CGAAGC-----------------------------------CAAACTCAA--------AAG---GGAA----C--------------------------------------------C---AA------------------------------------------------------------------------------CTGCAGAAGGAAAGCAAGCGCA----------G-C--CTGTTATCAGTGAA-ATATA--CACACAT----A---------TATATTCGAT--TTC-----AGCGT--------AAACAACTGC-----TATATAATGTCCGTCGCCATCTGACAGTGGTC----------CAAA-CSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................ATAATC---GCCGT-GT-------AAATC-CA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2015.00500100040000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCGAT--TTC-----AGCGT--------AAACAACTGC-----................................................2613.00330000000000
...............................................................................................................................................CAAGTGCCC-------------------AATTGGAATG---T........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00201000010000
..................................................................................................................................................GTGCCC-------------------AATTGGAATG---TCGAATATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
........................ATC---GCCGT-GT-------AAATC-CAA----T--------------------T------------------TTTTTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGAT--TTC-----AGCGT--------AAACAACTGC-----................................................2511.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATAATGTCCGTCGCCAC............................1911.00100100000000
..........................................................................................................................................................................................................................................................................................................................................................................AA----C--------------------------------------------C---AA------------------------------------------------------------------------------CTGCAGAAGGAAAG..................................................................................................................................................................2011.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAAAGCAAGCGCA----------G-C--CT.........................................................................................................................................2011.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACTGC-----TATATAATGTCCGTCGC...............................2511.00100100000000
....................................................................................................................................................................................G---TCGAATATCTGACAGCGACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAAAGCAAGCGCA----------G-C--CT.........................................................................................................................................1911.00100100000000
............................................................................................................................................................................ATTGGAATG---TCGAATATCTGACAGCGACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00110000000000
................................................................................................................................................AAGTGCCC-------------------AATTGGAATG---TC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATAATGTCCGTCGCCATCTGACAGC....................2711.00100000010000
....................................................................................................TTTGGAAAC-------------------------GAACCCCCACAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
....................CATAATC---GCCGT-GT-------AAATC-CA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
........................................................................................................................................................................................................................................................................................................................................................AA--------AAG---GGAA----C--------------------------------------------C---AA------------------------------------------------------------------------------CTGCAGAAG.......................................................................................................................................................................2211.00101000000000
....................................................................................................................................................GCCC-------------------AATTGGAATG---TCGAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAACTGC-----TATATAATGTCCGT..................................2411.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCAAGCGCA----------G-C--CTGTTATCAGTGAA-AT..........................................................................................................................2911.00100000010000
..................................................................................................TTTTTGGAAAC-------------------------GAACCCCCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................AAG---GGAA----C--------------------------------------------C---AA------------------------------------------------------------------------------CTGCAGAAGGAAAG..................................................................................................................................................................2511.00100000010000
...............................................................................T------------------TTTTTGGAAAC-------------------------GAACCCCCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGAAGGAAAGCAAGCGCA----------G-C--CTGT.......................................................................................................................................2711.00100010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGC-----TATATAATGTCCGTCGCCATCTGAC.......................2811.00110000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATA--CACACAT----A---------TATATTCGAT--TT..................................................................................2311.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................AA----C--------------------------------------------C---AA------------------------------------------------------------------------------CTGCAGAAGGAAAGCAAGCGC...........................................................................................................................................................2711.00100100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGAT--TTC-----AGCGT--------AAACAACTG......................................................2311.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................C--------------------------------------------C---AA------------------------------------------------------------------------------CTGCAGAAGGAAAGCAAGCGC...........................................................................................................................................................2511.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................GAA----C--------------------------------------------C---AA------------------------------------------------------------------------------CTGCAGAAGGAAAGCAAGC.............................................................................................................................................................2611.00100000010000
................................................................................................................................................................................................................................................................AATC--------------------A-------GT------CGAAGC-----------------------------------CAAACTC.........................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...............................................................................T------------------TTTTTGGAAAC-------------------------GAACCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000
......................TAATC---GCCGT-GT-------AAATC-CA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000
.........................................................................................................................................................................................CGAATATCTGACAGCGACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
.....................................................A----T--------------------T------------------TTTTTGGAAAC-------------------------GAACCCCCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAAGGAAAGCAAGCGC...........................................................................................................................................................1911.00100000010000
droEug1
TT-----------------ACATAACC---AGCATTGA-------AAATC-TGA----A---------------------------------------ATTTTGGAAGC-------------------------GAAGCCCCAAAAGTGTCC-ACT---GATTTAACTGCTAATTGGAATG---TCGCATATCTGACAGTGACTAAACAAACACCA---------------------------------------CAACC-------------------AA-------ATCCAAATCGAAAC-----------------------------------AAG---CAA-----GAAACG---AGAA----C--------------------------------------------TA-AAA--CTCCGT------------------------------------------------------------------------------GGAAAGCAA-----C--ACA-TAAG-C--CTGTTATCAGTGAA-ATATA--TA-------------------CATATTCGAT--TCC-----AGCGT--------AAACAACTGC-----TATATAATGTCCGTCGCCATCTGACAGTGGTC----------CAAA-CSizeHit CountTotal NormTotal
No Reads
droBia1
TT-----------------ACATAACC---AACTTTAA-------ATATC-CAGTCGAACA----------------TTT------------------TTTTTGGAACC-------------------------GAAACCCCACAAGTGTCC-CCA---GCTTTAACTGCTAATTGGAATG---GCGCGTATCTGACAGTGACCAAATAAACAACGAA-AA--GCT----------------------------------------ACCCCC--GAAATAG-------GT------CCGTAG-----------------------------------AGAACTCAA--------A--CAGCGAACTAACT--------------------TC--AAAAGCGTCGTGAGCAAAT--------CGCCCG------------------------------------------------------------------------------GGAAAACCA-----C--CGA-GAAGCCCTGAGTTATCAGTGAT-ATAGT--CA--CTTACTTAT----A----ATATTCGAT--TCC-----AGCGT--------AAACAACTGC-----TATATAATGTCCGTCGCCATCTGACAGTGGTC----------CAAA-GSizeHit CountTotal NormTotal
No Reads
droTak1
TT-----------------ACATAACC---AACGTTGA-------AAATACCAA----T--------------------T------------------TTTTTGGAAGC-------------------------GAAACCCCACAAGTGTCCCATA---GCTTTAACTGCTAATTGGAATG---TCGCATATCTGACAGTGACTAAATAAACACCAAA-AA--GCA----------------------------------------ACCCCC--GAAATAAAACCGAAAT------CCAAAA-----------------------------------AGAACTCAA--------G--CAGAGAAATAACT--------------------TA--AAAAGCGTCGTAAGCGAAT--------CGCCCA------------------------------------------------------------------------------GGAAAACAA-----C--CGA-GAAG-CCTGTGTTATCAGTGAA-ATATT--CACATAT----AT----A---GACATTCGAT--TCC-----AGCGT--------AAACAACTGC-----TATATAATGTCCATCGCCATCTGACAGTGGTC----------CAAA-CSizeHit CountTotal NormTotal
No Reads
droEle1
CT-----------------ATATAG-C---ACCATTGA-------TAATC-C--------------------------------------------TATTTTTGGAATC-------------------------GAACCCCTACAAGTGTCC-ACA---GCTTTAACTGCTAATTGGAATGTTGTCGCATATCTGACAGTGACTAAATAAACACCAAA-AA--GCA----------------------------------------ACCCCC---AAATAA-------AT------CCAAAC---------------------------------GGAAAACTCGA--------AAGCAGAGAA----CT--------------------TC--AAAAGCATTGTGAGGAAAT--------CGCCTA------------------------------------------------------------------------------GGAAAACAG-----T--CGC-GAAG-CCTGTGCTATCAGTAAA-ACATATAT--ATAT----ATATACA----ATATTCGAT--TCC-----AGCGT--------AAACAACTGC-----TATATAATGTCCGTCGCCATCTGACAGTGGTC----------CAAA-CSizeHit CountTotal NormTotal
No Reads
droRho1
TT-----------------ATATAAT-----------------------C-C--------------------------------------------CATTTTCGGAAGC-------------------------GAAACCCTACAAGTGTCC-ACG---GCTTAAACTGCTAATTGGAATGTTGTCTCATATCTGACAGTGACTAAATAAACACCAAA-AA--GCA----------------------------------------ACCCCA--AAAATAA-------AT------CCAACC-----------------------------------AGAACTCGA--------AAA---AGAA----CT--------------------TC--GAAAGCGTCGGGAGGAAAT--------CGCCCA------------------------------------------------------------------------------GGAAAACAA-----C------AAAG-CCTCTGTTATCAGTGAA-ATATA--CA--------------------ATATTCGATTTTCA-----AGCGT--------AAACAACTGC-----TGTATAATGTCCGTCGCCATCTGACAGTGGTC----------CAAA-CSizeHit CountTotal NormTotal
No Reads
droFic1
GAAAGGAAACCCCAAGGTTACATAAT-----------------------A-C--------------------------------------------CATTTTCGGAAGC-------------------------GAAACACCACAAGTGCCC-ACA---GCTTTAACTGCTAATTGGAATG---TCGCATATCTGACAGTGACTAAACAGACACCGAAAAA--TCA----------------------------------------ACCCCCCAAAAATAA-------GT------CCAAGC-----------------------------------TGAACTCAA--------AAA-AGAGAA----CT--------------------TC--AAAAGCGTCGTGAGGAAAT--------CGCCCA-------------------------------------------------------------------------------GAAAACAG-----CGTCTACAAAG-C--CTGTTATCAGTGAC-ATATT--TA--AATACATAT-------ATACATTCGAT--TCC-----AGCGT--------AAACAACTGC-----TATATAATGTCCGTCGCCATCTGACAGTGGTC----------AAAAACSizeHit CountTotal NormTotal
No Reads
droKik1
TT-----------------ACATAACGCATAACGTGGA-------AAATC-C--------------------------------------------TATTTTCGGAAGCGAAATATAAGCAAGAGAGACCCAGCGAAACCCTCCAAGTGAC---------------TTGTTAATTGGAATG---TCGCCTATCTGACAGTGACTAAATCAACACGAAA-AAAAA-------------------------------------------CACCCCAAAAATAA-------CT------CAAA--------------------------------------------------------------AA----C---------------------------------------------------ACTA--TTTGAAAATAAAAAGAATAAATTGGAGCGTCACTACAGCGTTACAACAGCGAAAGAAATAATATCAGCCAACA-----AGG------AGTGCA----------G-CCTGTGTTATCAGTGAA-GCATACGT--ACAT----ACATACT-GATATATTCGAT--TCA-----AGCGT--------AAACAACTGC-----TGTATAATGTTCACCGCCATCTGACAGTGGTC----------CAAA--SizeHit CountTotal NormTotal
No Reads
droAna3
TT-----------------ACATAACC---AGCATTGA----AAAAAATC-G--------------------------------------------TATTTTCGGAAG------------------------------CCCTACAAGTTTTTTGGAGCTAGTGGAACTGCTAATTGAAATG---TCGAATATCTGACAGTGACTCAATAAACACCA---------------------------------------ACAACAATACAACAC-T--GAAAAAA-----------------------------------------------------------ACCCAA--------AA-----------------------------AAATATAAAAAA--------------------T--ACTA------------------------------------------------------------TATTATC----AACA---GA--A------GCCGTA-------------AGGAGTTATCAGCGAG-GGAGA--AA--AAT----------A----ATATTCAAT--TGA-----AGCGT--------AAACAACTCCATATATATATAATGTCCGACGCCATCTGACAGTGTCCACTAGAACTACATA-CSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATC----AACA---GA--A------GCCGTA-------------AGGA.........................................................................................................................................2113.003010020
.....................................................................................................................................................TTTTGGAGCTAGTGGAACTGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002020000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATC----AACA---GA--A------GCCGTA-------------AGGAGT.......................................................................................................................................2312.002000020
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATCAGCGAG-GGAGA--AA--.................................................................................................................1912.002000020
.....................................................................................................................................................TTTTGGAGCTAGTGGAACTGCTAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--AAT----------A----ATATTCAAT--TGA-----AGCGT--------...............................................................2311.001010000
....................................GA----AAAAAATC-G--------------------------------------------TATTTTCGGAAG------------------------------CC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAT--TGA-----AGCGT--------AAACAACTCC.....................................................2211.001010000
.........................................................................................................................................................................................CGAATATCTGACAGTGACTCAATAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------------------------------------TATTATC----AACA---GA--A------GCCGTA-------------AGGA.........................................................................................................................................2511.001000010
....................................................................................................TTCGGAAG------------------------------CCCTACAAGTTTTTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATC----AACA---GA--A------GCCGTA-------------AGGAGT.......................................................................................................................................2511.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTTATCAGCGAG-GGAGA--.....................................................................................................................2011.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGCCATCTGACAGTGT..................1811.001010000
..........................................................................................................................................................................................GAATATCTGACAGTGACTCAATAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CTA------------------------------------------------------------TATTATC----AACA---GA--A------GC..............................................................................................................................................................1911.001010000
.....................................................................................................................................................TTTTGGAGCTAGTGGAACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
....................................................................................................................................................................................................CAGTGACTCAATAAACACCA---------------------------------------ACAACAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC----AACA---GA--A------GCCGTA-------------AGGA.........................................................................................................................................2011.001001000
...........................................AAAAATC-G--------------------------------------------TATTTTCGGAAG------------------------------CCCTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
....................................................................................................................................................TTTTTGGAGCTAGTGGAACTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
.................................................................................................................................................................................................................AACACCA---------------------------------------ACAACAATACAACAC-T--...............................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
............................................................................................................................................................................................................CAATAAACACCA---------------------------------------ACAACAATACAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGCCATCTGACAGTGTCCAC..............2311.001100000
.........................................................................................................................................................................................CGAATATCTGACAGTGACTCAATAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTTATCAGCGAG-GGAG........................................................................................................................1911.001000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATC----AACA---GA--A------GCCGTA-------------AGGA.........................................................................................................................................2311.001001000
......................................................................................................................................................................................................................................................................TACAACAC-T--GAAAAAA-----------------------------------------------------------ACCCA........................................................................................................................................................................................................................................................................................................................................2111.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATC----AACA---GA--A------GCCGTA-------------AG...........................................................................................................................................1911.001001000
..........................................................................................................................................................................................................CTCAATAAACACCA---------------------------------------ACAACAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
....................CATAACC---AGCATTGA----AAAAAATC-G--------------------------------------------TATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
..........................................................................................................................................................................TAATTGAAATG---TCGAATATCTGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
....................................................................................................................................................TTTTTGGAGCTAGTGGAACTGCTAATT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----AGCGT--------AAACAACTCCATATATAT.............................................2411.001000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCAGCGAG-GGAGA--AA--AAT----------A----ATATT..........................................................................................2611.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATAATGTCCGACGCCATCT..........................2311.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAT--TGA-----AGCGT--------AAACAACTCCAT...................................................2411.001010000
....................................................................................................................................................................................................................ACCA---------------------------------------ACAACAATACAACAC-T--GA.............................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
......................................................................................................................................................TTTGGAGCTAGTGGAACTGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droBip1
TT-----------------ACATAACC---ATTGTTGGATTGAAAAAATC-C--------------------------------------------TATTTTCGGAAG------------------------------CCCCACAAGTTTCG---------------AGCTAATTGAAATG---TCGCATATCTGACAGTGACTCAATAAATAAAAAA-AA--A-----------------------------------------------------------------T------ATAA-------------------------------------AAAGCCCAA--------AAGCTAAGAACTAGCTAATCGCCACAAAATAAAATATAAAAAAAACGTCACAAGGAAAC--------CTACT----------------------------------------------------------TACTATCAG----TAGCAGGAGGAGTGCAG---CA-GTCTG--TTG-C--CTGTTATCAGTGAA-GGGAA-----------------------AAAATTCAAT--TGA-----AGCGT--------AAACAACTCC-----TATATGATGTCCGACGCCATCTGACAGTGTCCAC--------CAAG-CSizeHit CountTotal NormTotal
No Reads
dp5
TA-----------------ACATT-------------------------------------------------------TTTTTCGTGGAAGAAGCCATATTCCATA--------------------------------CCCCAAAGTCA----------------GCGTTAATTAGAATG---TCGCATATTTCACAGTGACAAAAGC---ACAGAT-AT--TCTCCCCCACACTCATAAAATTTTCTGAATCGAGTTG--------------------A-------GT------CGAGTCGAGTCCGAGTGTAAACGCTAGGAAATTTGAGACG--------AAAAG-AGAA---------ACGAACAGATCGGTACG----------------------------------AACAAA----------------GG-------------------------------------CAGAGCGAGTATTTTC----CACA-----GGG------AGTGCA-------------CTCTGTTATCAGTGAA-GAAAA---------------------------AGCAAT--TCG-----CGAGT--------AAACAACTGC-----TGTATAATGTCA---GCCATCTGACAGTGAGC----------GAAA-CSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................................................................................................................................................................................................................GTAAACGCTAGGAAATTTGAGAC..................................................................................................................................................................................................................................................................................................................................................2315.0050410000000
.....................................................................................................................................................................................................................................................................................................................................................................................CGGTACG----------------------------------AACAAA----------------GG-------------------------------------CAGAGCGA..............................................................................................................................................................................................2314.0040000000004
................................................................................................................................................................................................................................................................GTTG--------------------A-------GT------CGAGTCGAGTCCGA...........................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
...........................................................................................................................................................................................................................................................................................................GTCGAGTCCGAGTGTAAACGCTAGGA............................................................................................................................................................................................................................................................................................................................................................2612.0020100100000
............................................................................................................................................................................................................................................CATAAAATTTTCTGAATCGAGTTG--------------------A-------GT------.........................................................................................................................................................................................................................................................................................................................................................................................2712.0020020000000
................................................................................................................................................................................................................................................................................................................................................................................CAGATCGGTACG----------------------------------AACAAA----------------GG-------------------------------------CAGA..................................................................................................................................................................................................2411.0010000000010
............................................................................................................................................................................................................................................CATAAAATTTTCTGAATCGAGTT..............................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
.......................T-------------------------------------------------------TTTTTCGTGGAAGAAGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AA----------------GG-------------------------------------CAGAGCGAGTATTTT.......................................................................................................................................................................................1911.0010010000000
..................................................................................................................................................................................................................................................................................................................................GGAAATTTGAGACG--------AAAAG-A..................................................................................................................................................................................................................................................................................................................................2011.0010000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---GCCATCTGACAGTGAGC----------......1911.0010100000000
...................................................................................................................................................................................................................................................................G--------------------A-------GT------CGAGTCGAGTCCGAGT.........................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................TACG----------------------------------AACAAA----------------GG-------------------------------------CAGAGCGAGT............................................................................................................................................................................................2211.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-GAAAA---------------------------AGCAAT--TCG-----CGAGC--------...............................................................2011.0010010000000
............................................................................................................................................................................................................................................................................................................................................................................CGAACAGATCGGTACG----------------------------------AACAAA----------------GG-------------------------------------......................................................................................................................................................................................................2411.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AACAAA----------------GG-------------------------------------CAGAGCGAGT............................................................................................................................................................................................1811.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................AACAGATCGGTACG----------------------------------AACAAA----------------GG-------------------------------------CAGA..................................................................................................................................................................................................2611.0010000000001
.............................................................................................................................................CCAAAGTCA----------------GCGTTAATTAGAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
.................................................................................................................................................................................................................................................................................................................................................................................AGATCGGTACG----------------------------------AACAAA----------------GG-------------------------------------C.....................................................................................................................................................................................................2011.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................AAA----------------GG-------------------------------------CAGAGCGAGTATTTTC----CA................................................................................................................................................................................2311.0010010000000
..........................................................................................................................................................................................................................................................................................................................AAACGCTAGGAAATTTGAGAC..................................................................................................................................................................................................................................................................................................................................................2111.0010000000001
......................................................................................................................................................................................................................................................................................................................................................................................GGTACG----------------------------------AACAAA----------------GG-------------------------------------CAGAGC................................................................................................................................................................................................2011.0010100000000
..............................................................................................................................................................................................................................................................................................................................................CG--------AAAAG-AGAA---------ACGAACAGATCGGT........................................................................................................................................................................................................................................................................................................2511.0010000100000
...........................................................................................................................................................................................................................................................................................................................................................................ACGAACAGATCGGTACG----------------------------------AACAAA----------------GG-------------------------------------C.....................................................................................................................................................................................................2611.0010000000001
....................................................................................................................................................................................................................................................TTTCTGAATCGAGTTG--------------------A-------GT------C........................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---GCCATCTGACAGTGAGC----------GAAA-C2311.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................ATCGGTACG----------------------------------AACAAA----------------GG-------------------------------------CAGAGCGA..............................................................................................................................................................................................2511.0010000000001
......................................................................................................................................................................................................................................................................................................................................ATTTGAGACG--------AAAAG-AGAA---------......................................................................................................................................................................................................................................................................................................................1911.0010000010000
.............................................................................................................................................................................................................................................................................................................................................................................GAACAGATCGGTACG----------------------------------AACAAA----------------GG-------------------------------------CAGA..................................................................................................................................................................................................2711.0010000000001
................................................................................................................................................AAGTCA----------------GCGTTAATTAGAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...................................................................................................................................................................................................................................................................G--------------------A-------GT------CGAGTCGAGTCCGAGTGTAAACGCT................................................................................................................................................................................................................................................................................................................................................................2911.0010010000000
....................................................................................................................................................................................................................................................TTTCTGAATCGAGTTG--------------------A-------GT------.........................................................................................................................................................................................................................................................................................................................................................................................1911.0010010000000
................................................................................TTTTCGTGGAAGAAGCCATATTCCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010001000000
..................................................................................................................................................................................................................................................................................................................................................................................GATCGGTACG----------------------------------AACAAA----------------GG-------------------------------------CAGAGCG...............................................................................................................................................................................................2511.0010100000000
............................................................................................................................................................................ATTAGAATG---TCGCATATTTCACAGTGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010000000
...............................................................................................................................................................................................................................................................................................................................................................GAA---------ACGAACAGATCGGTA.......................................................................................................................................................................................................................................................................................................1811.0010000100000
...........................................................................................................................................................................................................................................................................................................................................................................ACGAACAGATCGGTACG----------------------------------AACAAA----------------GG-------------------------------------CA....................................................................................................................................................................................................2711.0010010000000
...............................................................................................................................................................................................................................................................................................................................................................................ACAGATCGGTACG----------------------------------AACAAA----------------GG-------------------------------------C.....................................................................................................................................................................................................2211.0010000000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGTCA---GCCATCTGACAGTGAGC----------......2511.0010001000000
....................................................................................................................................................................................................................................................................................................................GAGTGTAAACGCTAGGAAATTTGAGAC..................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
...........................................................................................................................................................................AATTAGAATG---TCGCATATTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................G-------------------------------------CAGAGCGAGTATTTTC----CACA-----GGG------................................................................................................................................................................2411.0010100000000
................................................................................................................................................................................................................................................................GTTG--------------------A-------GT------CGAGTCGAGTCCGAGC.........................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
..........................................................................................................................................................................................GCATATTTCACAGTGACAAAAGC---.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................ATCGGTACG----------------------------------AACAAA----------------GG-------------------------------------CAG...................................................................................................................................................................................................2011.0010000000001
.............................................................................................................................................................................................................AAGC---ACAGAT-AT--TCTCCCCCACACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010000000
...........................................................................................................................................................................................................................................................................................................................................................................................G----------------------------------AACAAA----------------GG-------------------------------------CAGAGCGAGTATTT........................................................................................................................................................................................2311.0010010000000
..................................................................................................................................................................................................................................................ATTTTCTGAATCGAGTTG--------------------A-------.................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.............................................................................................................................................................................................................................................................CGAGTTG--------------------A-------GT------CGAGTCGAGTCC.............................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTC----CACA-----GGG------AGTGCA-------------CTCT.........................................................................................................................................2311.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................AACAGATCGGTACG----------------------------------AACAAA----------------GG-------------------------------------C.....................................................................................................................................................................................................2311.0010000000001
..................................................................................................................................................................................................................................................................................................................................................................................GATCGGTACG----------------------------------AACAAA----------------GG-------------------------------------CAGAGCGA..............................................................................................................................................................................................2611.0010000000001
.....................................................................................................................................................................................................................................................................................................................................AATTTGAGACG--------AAAAG-AGAA---------AC....................................................................................................................................................................................................................................................................................................................2211.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTC----CACA-----GGG------AGTGCA-------------CTCT.........................................................................................................................................2211.0010000100000
droPer2
TA-----------------ACATT-------------------------------------------------------TTTTTCGTGGAAGAAGCCATATTCCGTA--------------------------------CCCCAAAGTCA----------------GCGTTAATTAGAATG---TCGCATATTTCACAGTGACAAAAGC---ACAGAT-AT--TCTCCCCCACACTCATAAAATTTTCTGAATCGAGTTG--------------------A-------GT------CGAGTCGAGTCCGAGTGTAAACGCTAGGAAATTTGAGACG--------AAAAAAAAAA---------ACGAGCAGATCGGTACG----------------------------------AACAAA----------------GC-------------------------------------CAGAGCGAGTATTTTC----CACA-----GGG------AGTGCA-------------CTCTGTTATCAGTGAA-GAAAA---------------------------AGCAAT--TCG-----CGAGT--------AAACAACTGC-----TGTATAATGTCA---GCCATCTGACAGTGAGC----------GAAA-CSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................................................G---TCGCATATTTCACAGTGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1915.005302000
.....................................................................................................................................................................................................................................................TTCTGAATCGAGTTG--------------------A-------GT------CGAGTC...................................................................................................................................................................................................................................................................................................................................................................................2413.003300000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATAATGTCA---GCCATCTG.........................1912.002200000
...............................................................................................................................................................................................................................................................................................................................................................................GCAGATCGGTACG----------------------------------AACAAA----------------GC-------------------------------------CAGAGC................................................................................................................................................................................................2712.002200000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCTGACAGTGAGC----------GAAA-C2012.002200000
....................................................................................................................................................................................................................................................TTTCTGAATCGAGTTG--------------------A-------GT------C........................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
........................................................................................................................................................................................................................................................................................................................GTAAACGCTAGGAAATTTGAGA...................................................................................................................................................................................................................................................................................................................................................2212.002200000
.............................................................................................................................................................................................................................................................................................................................................................................GAGCAGATCGGTACG----------------------------------AACAAA----------------GC-------------------------------------CAGAGC................................................................................................................................................................................................2912.002200000
........................................................................................................................................................................................................................................................................................................................GTAAACGCTAGGAAATTTGAGAC..................................................................................................................................................................................................................................................................................................................................................2312.002100001
....................................................................................................................................................................................G---TCGCATATTTCACAGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002200000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT--TCG-----CGAGT--------AAACAACTGC-----T...............................................2211.001001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG-----CGAGT--------AAACAACTGC-----TGTATAATGTC.....................................2811.001010000
..................................................................................................................................................................................................................................................................................................................CCGAGTGTAAACGCTAGGAA...........................................................................................................................................................................................................................................................................................................................................................2011.001000010
.....................................................................................................................................................................................................................................................TTCTGAATCGAGTTG--------------------A-------GT------CGAGT....................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.....................................................................................................................................................................................................................................................TTCTGAATCGAGTTG--------------------A-------GC------.........................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
...............................................................................................................................................................................................................................................................................................................................................................................GCAGATCGGTACG----------------------------------AACAAA----------------GC-------------------------------------......................................................................................................................................................................................................2111.001100000
................................................................................................................................................................................................................................................................GTTG--------------------A-------GT------CGAGTCGAGTCCGAGT.........................................................................................................................................................................................................................................................................................................................................................................2311.001100000
................................................................................................................................................................................................................................................................................................................................................................AA---------ACGAGCAGATCGGTACG----------------------------------AAC................................................................................................................................................................................................................................................................2211.001000010
............................................................................................................................................................................................................................................................................................................................................................AAAAAA---------ACGAGCAGATCGGTACG----------------------------------AAC................................................................................................................................................................................................................................................................2611.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................ACG----------------------------------AACAAA----------------GC-------------------------------------CAGAGCGA..............................................................................................................................................................................................1911.001001000
.........................................................................................................................................................................................................................................................................................................................................................................................ACG----------------------------------AACAAA----------------GC-------------------------------------CAGAGCGAGT............................................................................................................................................................................................2111.001001000
........................................................................................................................................................................................................................................................................................................CGAGTCGAGTCCGAGTGTAAACG..................................................................................................................................................................................................................................................................................................................................................................2311.001000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGTTATCAGTGAA-GAAAA---------------------------AGC.........................................................................................2411.001010000
......................................................................................................................................................................................................................................................TCTGAATCGAGTTG--------------------A-------GT------CGAGT....................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................GTACG----------------------------------AACAAA----------------GC-------------------------------------CAGAGCGA..............................................................................................................................................................................................2111.001010000
.......................................................................................................................................................................................................................GAT-AT--TCTCCCCCACACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
.........................................................................................AAGAAGCCATATTCCGTA--------------------------------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000
droWil2
CT-----------------A--------------------------------------------------------------------------------------------------------------------------------------------------------ATTAATATG---TCAAAAATCTGACAGTGACTCAAATAAAAAAAAA-TAGAG-------------------------------CAACA--------------------T-------AT------TGAAAC-----------------------------------CAAA--------------------AAA----CT-----------------------------------------------------TTAT-----------------------------------------------------------------------------------GCAAACACA----------A-A--TTGTTT-----GCAAATTTT--CAAATAT----AT----TTTATATATT--TT--TCTTGTGAAGCGTTAAGCTAAAAAATATTGC-------TAGAATGTCAGCCCAAATCTGACAGTGACT----------TTAACCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATT--TT--TCTTGTGAAGC.........................................................................1812.00200011
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCCAAATCTGACAGTGAC.................2012.00220000
........................................................................................................................................................................................................................................................................................................TGAAAC-----------------------------------CAAA--------------------AAA----CT-----------------------------------------------------TTAT-----------------------------------------------------------------------------------GCAAAC.............................................................................................................................................................2512.00220000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATGTCAGCCCAAATCT..........................1912.00210010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAGCGTTAAGCTAAAA.............................................................1912.00200011
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT--TCTTGTGAAGCGTTAAGCTAA...............................................................2311.00100100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGC-------TAGAATGTCAGCCCAAATCT..........................2411.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT----TTTATATATT--TT--TCTTGTGAAGCGT.......................................................................2711.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATT--TT--TCTTGTGAAGCGTT......................................................................1911.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATT--TT--TCTTGTGAAGCGTTAAGC..................................................................2511.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGTGAAGCGTTAAGCTAAAA.............................................................2311.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATT--TT--TCTTGTGAAGCGTTAAGCTAAAA.............................................................2811.00100100
.........................................................................................................................................................................................CAAAAATCTGACAGTGACTCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.........................................................................................................................................................................................CAAAAATCTGACAGTGACTCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCCCAAATCTGACAGT....................1811.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAATATTGC-------TAGAATGT......................................2011.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGAAGCGTTAAGCTAAA..............................................................2011.00100100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTT-----GCAAATTTT--CAAATA...............................................................................................................1911.00100010
.............................................................................................................................................................................................AATCTGACAGTGACTCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT--TCTTGTGAAGCGTTAAGCT.................................................................2111.00100010
droVir3
TAATACAAAAACCTTA----------------CA-TAA-----GAAAATC-A------AAATATATAAGTGAGGTCG------------------------TACAAG--------------------------------TGCCAAAA--ACA-ATT---GCTTTGCCGCCTAATAAGAATG---TCAAATATCTGACACACAATAATTAAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCACTCGACAAG-CAG----------CAAA-ASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................................................................TAATTAAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCACTCGACA......................2011.001000000000000000010000000000000000000000000000000000000000000000
...................................................................AGTGAGGTCG------------------------TACAAG--------------------------------TGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................................................................TAATAAGAATG---TCAAATATCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................ATTAAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCACTCGACAAG-C..................2111.001001000000000000000000000000000000000000000000000000000000000000
................................................................ATAAGTGAGGTCG------------------------TACAAG--------------------------------TG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................ATATCTGACACACAATAATTAAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------................................2511.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................TTTGCCGCCTAATAAGAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000010000000000000000000000000000000000000000
................................................................................................................................................................................................................AAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCACTCGACAAG-CAG----------CAAA-A2511.001000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................CACACAATAATTAAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCACT...........................2211.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................AAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCACTCGACAAG-CAG----------C.....2111.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................AATATCTGACACACAATAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000010000000000000000000000000000000000000000
...................................................................................................................................................................................................................GT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCACTCGACAAG-CAG----------CAAA-A2211.001000100000000000000000000000000000000000000000000000000000000000
...................................TAA-----GAAAATC-A------AAATATATAAGTGAGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000100000000000000000000000000000000000000000000000
......................................................................GAGGTCG------------------------TACAAG--------------------------------TGCCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000100000000000000000000000000000000000000000000
.......................................................................................................CAAG--------------------------------TGCCAAAA--ACA-ATT---GCTTTGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................CA-ATT---GCTTTGCCGCCTAATAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
............................................................ATATATAAGTGAGGTCG------------------------TACAAG--------------------------------TGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000010

Generated: 05/19/2015 at 12:16 PM