ID:

dsi_20644

Coordinate:

2l:4665651-4665800 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.1

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

GACGTACTGCAAGGACGAGGTCGTGATTCGCAATGCCGACTCCGGCAAAGGTAAGTTTCTGATCAGCTGAGGAGTGTTCTGGAGCACAAAGATCTACAGAAATGGTTTTCAATAATGTATTCCTCCATTCCCGTGGCCACAAAGTCATGGGCATCAAGGGGCGTCGCGTGCACATGATCGAGGAGCTAAGCGAAACCATTATATCGTTTCAAAGAGGTAACTCCAGAGAGCTGGTTTTAATTGATCCTCA
*********************************************************************************************************************************************..((((((.((((...((....))..)))).))))))...............*********************************************************
Read size # Mismatch Hit Count Total Norm Total M025
embryo
M053
female body
SRR553486
Makindu_3 day-old ovaries
M023
head
M024
male body
SRR553485
Chicharo_3 day-old ovaries
SRR902009
testis
GSM343915
embryo
SRR553488
RT_0-2 hours eggs
SRR553487
NRT_0-2 hours eggs
.............................................................................................................................................AAGTCATGGGCATCAAGGGGC........................................................................................ 21 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0
............................................................................................................................................................................CATGATCGAGGAGCTAAGCGA......................................................... 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
............................................................................................................................................................................CATGATCGAGGAGCTAAGCGAAACC..................................................... 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
............................................................GATCAGCTGAGGAGTGTTCTGGAGCACA.................................................................................................................................................................. 28 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
..................................................................................................................................................................GTCGCGTGCACATGATCGAGGAG................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................CTCCAGAGAGCTGGTTTTAATT........ 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.ACGTACTGCAAGGACGAGGTCGG.................................................................................................................................................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................AGCTAAGCGAAACCATTATATCG............................................ 23 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
..CGTACTGCAAGGACGAGGTCGT.................................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.........................................................................................................................................................................GCACATGATCGAGGAGCTAAGCGAAAC...................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...............................................AAGGTAAGTTTCTGATCAGCT...................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
............AGACAAGGTCGTGATTC............................................................................................................................................................................................................................. 17 2 12 0.08 1 0 0 0 0 0 0 0 0 1 0
.........CAAGGTCGAGGTCGCGA................................................................................................................................................................................................................................ 17 2 14 0.07 1 0 0 0 0 0 0 0 0 0 1
..........AAGGTCGAGGTCGCGA................................................................................................................................................................................................................................ 16 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................AATTCCACCACTCCCGTGG.................................................................................................................. 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CTGCATGACGTTCCTGCTCCAGCACTAAGCGTTACGGCTGAGGCCGTTTCCATTCAAAGACTAGTCGACTCCTCACAAGACCTCGTGTTTCTAGATGTCTTTACCAAAAGTTATTACATAAGGAGGTAAGGGCACCGGTGTTTCAGTACCCGTAGTTCCCCGCAGCGCACGTGTACTAGCTCCTCGATTCGCTTTGGTAATATAGCAAAGTTTCTCCATTGAGGTCTCTCGACCAAAATTAACTAGGAGT
*********************************************************..((((((.((((...((....))..)))).))))))...............*********************************************************************************************************************************************
Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
SRR553485
Chicharo_3 day-old ovaries
SRR553488
RT_0-2 hours eggs
GSM343915
embryo
............................................................................................AGATGTCTTTACCAAAAGTTATTACA.................................................................................................................................... 26 0 1 1.00 1 1 0 0 0
.......................................................................................................................................................................................................................................ATCAAAATTAACTAGGAGT 19 1 1 1.00 1 0 1 0 0
...............................................................GTCCACTCCTCTCAAGACAT....................................................................................................................................................................... 20 3 4 0.25 1 0 0 1 0
....ATGTCGTACCTGCCCCAG.................................................................................................................................................................................................................................... 18 3 20 0.10 2 2 0 0 0
......................................................CCAAGACCAGTCGACCCCTC................................................................................................................................................................................ 20 3 10 0.10 1 0 0 1 0
..................................................................GAGTCCTCACGAGACCTGG..................................................................................................................................................................... 19 3 13 0.08 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:4665601-4665850 - dsi_20644 GACGTACTGCAAGGACGAGGTCGTGATTCGCAATGCCGACTCCGGCAAAGGTAAGTTTCT-GATCAGCTGAGGAGTGTTCTG---------------------GAGCACAAAGAT--------CTACAG-AAA--TGG-T-TTTCAATAATGTATTCC--------T--------------------CC---------------------------------------------------ATTCCCGTGGCCACAAAGTCATGGGCATCAAGGGGCGTCGCGTGCACATGATCGAGGAGCTAAGCGAAACCATTATATCGTTTCAAAGAGGTAACT--CC-AG----AG-------------------AGC-------TGGTTTT---AAT---TGATCCTCA
droSec2 scaffold_5:2940729-2940978 - GACGTACTGTAAGGACGAGGTCGTGATTCGCAATGCCGACTCCGGCAAAGGTAAGTTTCT-AATCAGCTGAGGAGTGTTCTG---------------------GAGCACAAAGAT--------CTACAG-AAA--TGG-T-TTTCAATAATGTATTCC--------T--------------------CC---------------------------------------------------ATTCCCGTGGCCACAAAGTCATGGGCATCAAGGGGCGTCGAGTGCACATGATCGAGGAGCTAAGCGAAACTATTATATCGTTTCAAAGAGGTAACT--CC-AG----AG-------------------AGC-------TGGTTTT---AAT---TGATCCTCA
dm3 chr2L:4845051-4845303 - GACGTACTGCAAGGACGAGGTCGTGATTCGCAATGCTGACTCCGGCAAAGGTAAGTTTTTCAATCAGCTGAGGAGTGTTCTG---------------------GAGCACACAGAT--------CTACAG-AAA--TGG-T-TTTCAATAATGTATTCC--------T--------------------CC---------------------------------------------------ATTCCCGTGGCCAAAAAGTAATGGGCATCAAGGGGCGTCGCGTGCACATGATCGAGGAGCTAAGCGAAACCATTATATCGTTTCAAAGAGGTAACT--CC-AG----AG-------------------AGC-------TGGTTTT---AATTG-TGATCCTCA
droEre2 scaffold_4929:4926212-4926461 - GACGTACTGCAAGGACGAGGTCGTGATTCGCAATGCCGACTCCGGCAAAGGTAAGTTTCT-GATCAGCTGAGGAGTGTTCTG---------------------GAGCACACAGAT--------CTATAA-AAA--TGG-T-TTTAAATAATGAATTCC--------T--------------------CC---------------------------------------------------ATTGCCGTGGCCACAAAGTCATGGGCATCAAGGGGCGTCGCGTGCACATGATCGAGGAGCTAAGCGAAACCATAATATCGTTTCAAAGAGGTAACC--CC-AG----AA-------------------AGC-------TGGTTTT---AAT---TGACCCTCA
droYak3 2L:4855272-4855522 - AACTTACTGCAAGGACGAGGTCGTGATTCGCAACGCCGACTCCGGCAAAGGTAGGTTACT-GATCAGCTGAGGAGTGTTCTT---------------------GAGCACACAGAT--------CTATAAAAAA--TGG-T-TTTAAATAATGTATTAC--------T--------------------CC---------------------------------------------------ATTCCCATGGCCACAAAGTCATGGGCATCAAGGGGCGTCGCGTGCACATGATCGAGGAGCTAAGCGAAACCATAATATCGTTTCAAAGAGGTAACT--CC-AG----AA-------------------AGC-------TGGTTTT---AAT---TGACCCTCA
droEug1 scf7180000409005:723706-723953 - GACGTACTGCAAGGACGAGGTCGTAATTCGCAATGCCGACTCCGGCAAAGGTAAGTTTTC---TCAAGTGAGGAGTAACCCG---------------------GATACCCCTGAT--------ATTTGA-ACA--TTA-ATTTAAAAATATATATTCC--------A--------------------CT---------------------------------------------------TAACCCGTGGCCACAAAGTTATGGGCATCAAGGGGCGACGCGTGCACATGATCGAGGAACTAAGCGAAACCATAATATCGTTTCAAAGAGGTAACCT-CC-AG----C--------------------AGC-------TGGTTTT---AAT---TG-TCCTCA
droBia1 scf7180000302188:1419504-1419753 - GACGTACTGCAAGGATGAGGTCGTGATTCGCAACGCCGACTCCGGCAAAGGTGAGTTCTC--CCCGGCCTAGAAGTGAGCCG---------------------GAACACTTTGAT--------CTTTGA-TTA--TGA-ATTTATAAAAATGTATTCC--------T--------------------CA---------------------------------------------------TACCCCGTGGCCACGAAGTCATGGGCATCAAGGGGCGACGCGTGCACATGATCGAGGAACTTAGCGAAACCATAATATCGTTTCAAAGAGGTAACCC-CC-AG----AA-------------------GGC-------TGGTTTT---AAT---TC-TCCTCA
droTak1 scf7180000415705:144015-144186 - -------------------------------------------------------------------------------CTG---------------------AAACACACTGAT--------CTTTGA-AAA--TGA-ATCT--AAAAATGTATTCC--------A--------------------AA--------------------------------------A------------AATCCCGTGGCCACAAAGTCATGGGCATCAAGGGGCGACGCGTGCACATGATCGAGGAACTAAGTGAAACCATAATATCGTTTCAAAGAGGTAAACG-CC-AG----AA-------------------AGC-------TGGTTTT---AAT---TG-TCCTCA
droEle1 scf7180000491046:2500544-2500789 - GACGTACTGCAAGGACGAGGTCGTGATCCGCAACGCTGACTCTGGAAAAGGTGAGTATTCCG--CGTTTGAGAAGTGTCCTT---------------------GAA--CACTGAT--------CTTTAA-A----TTGAACTT--GATAACGTATTCC--------A--------------------CT---------------------------------------------------AATCTCGTGGCCACAAAGTCATGGGCATCAAAGGGCGACGCGTGCACATGATCGAGGAACTTAGCGAAACCATAATATCGTTTCAAAGAGGTAACCC-CC-AG----AA-------------------AGC-------TGGTTTT--CAAT---TG-TCCTCA
droRho1 scf7180000768274:12912-13158 + GACGTACTGCAAGGACGAGGTCGTGATTCGCAACGCTGACTCTGGAAAAGGTGAGTATCTC---TGGCTGAGCAGTGTCCTC---------------------GAA--CACTGAT--------TTTTGA-ATA--TGA-ACTT--GAAAATGTATTCC--------A--------------------CT---------------------------------------------------AATCCCGTGGCCACAAAGTCATGGGCATCAAGGGGCGACGCGTGCACATGATCGAGGAACTTAGCGAAACCATAATATCGTTTCAAAGAGGTAACAC-CCAGG----AA-------------------AGC-------TGGTTTT--GAAT---TC-TCCTCA
droFic1 scf7180000453842:1409727-1409973 + GACTTATTGCAAGGATGAGGTCGTGATTCGCAACGCTGATTCCGGAAAAGGTGAGTTTTC-G--CAGATATGAAGTGTCCTA---------------------GAAGACACTGTT--------TTATGA-TTA--TGA-T-TT--AAAAATGTATTCC--------T--------------------CC---------------------------------------------------AATTCCGTGGCCACAAAGTCATGGGCATCAAGGGGCGACGCGTGCACATGATCGAGGAACTTAGCGAAACCATAATATCGTTTCAAAGAGGTAACC--CC-AG----AA-------------------GGC-------TGGTTTT-TCTAT---TG-TCCTCA
droKik1 scf7180000302472:3525518-3525777 - GACGTACTGCAAGGACGAGGTGGTTATACGCAACGCAGACTCCGGCAAGGGTGAGTATCAG---CGGCTG---ATTGGTTAG---------------------GAACAC-TTAAT--------ATTTGA-ATATATTG---TT--GAAAATGTATTTT--------A--------------------CA--------------------------------------AACCAAAATATATAACCCCCTGACC-CGTAGTCATGGGCATCAAAGGTCGACGCGTGCACATGATCGAGGAGCTTAGCGAAACCATAATATCGTTTCAAAGAGGTAACCT-CCCAG----AA-------------------CTC-------TGGGTTC--AAATAGTCGAT-TCTA
droAna3 scaffold_12916:9415590-9415823 - GACATATTGCAAGGACGAAGTGGTAATCCGCAATGCGGACTCCGGAAAGGGTAAGTAGTCC---GGACTGAGA-----CC-----------------CCATGA-TG--AACTGAT--------CTTTA-----------------AAAAGTATATTCC--------A--------------------AA---------------------------------------------------AATCCCGTGGCCATAAAGTCATGGGTATCAAGGGTCGCCGCGTGCACATGATCGAGGAACTTAGCGAAACAATAATATCGTTTCAAAGAGGTAACCC-AC-CG----AA-------------------TGT-------CGGTCTT-GAGAT---TA-AACCCA
droBip1 scf7180000396535:1982655-1982885 - GACATATTGCAAGGATGAAGTGGTCATCCGTAACGCGGACTCCGGCAAGGGTAAGTATTCC---GGACTGAGA-----CC-----------------CCAAGA----CATCTGAT--------CTTT------------------AAAAGTATATTCC--------A--------------------AA---------------------------------------------------AATGCCATGGCCATACAGTCATGGGTATCAAGGGTCGCCGCGTGCACATGATCGAGGAACTTAGCGAAACAATAATATCGTTTCAAAGAGGTAACCC-AC-CG----AA-------------------TGT-------CGGTTTA--AGAT---TA-AACCCA
dp5 4_group3:3610198-3610454 - AACCTACTGCAAGGACGAGGTGGTAATCCGCAATGCTGATTCGGGCAAAGGTGAGTGTGTC---------------------TCTTGCCACCATTCCCCAAAACTGAAC-TTAAT--------CTTTGA----------------ACAAATGTATTCT--------A-------------------------------------------------------------------------AATCCCATGTCTGCTCAGTCATGGGCATCAAAGGGCGACGCGTCCACATGATTGAGGAGCTAAGCGAAACTATCATATCGTTTCAAAGAGGTAACGC-CC-AG----ATCCTTCTCTCTCAGCCTGTTCGC-------TAGACCTA--AG----GACTACCCA
droPer2 scaffold_1:5089683-5089939 - AACCTACTGCAAGGACGAGGTGGTAATCCGCAATGCTGATTCGGGCAAAGGTGAGTGTGTC---------------------TCTTGCCACCATTCCCCAAAACTGAAC-TTAAT--------CTTTGA----------------ACAAATGTATTCT--------A-------------------------------------------------------------------------AATCCCATGTCTGCTCAGTCATGGGCATCAAAGGGCGACGCGTCCACATGATTGAGGAGCTAAGCGAAACTATCATATCGTTTCAAAGAGGTAACGC-CC-AG----ATCCTTCTCTCTCAGCCTGTTCGC-------TAGACCTA--AG----GACTACCCA
droWil2 scf2_1100000004585:1725346-1725586 + AACCTATTGCAAGGATGAGGTGGTTATACGTAATGCCGATTCGGGCAAAGGTAAAAAGGC-------------------TAT---------------------AAACGC-AAAAA--------AA-AAA-AAATACTA---TT--G-----------T--------T--------------------AT----------------ATTCCATGCAAATCTTATAATAAATCAAAAT--------ATTTGCATATTCAGTTATGGGCATTAAAGGCCGACGTGTACACATGATTGAGGAACTTAGCGAAACAATAATATCGTTCCAAAGAGGTAAAAC-CA-AA----GA-------------------TGT-------TGGCTTA---AAT---AA-TC----
droVir3 scaffold_13246:2247963-2248197 - GACCTATTGCAAGGATGAGGTGGTCATACGCAACGCCGACTCTGGCAAGGGTAAGTATATC---GGTTCGGGT---GCTGCC---------------------GA------------------CTACCG-GAT--GCG-C-TTCC---------------------A--------------------ACATTCTTATGTCTTACT----------------------AA-----------ATAA----ACTCAAATAGTTATGGGCATTAAGGGCCGACGCGTACACATGATCGAGGAACTTAGCGAAACTATAATATCCTTTCAAAGAGGTAAAAC--A-AA----AA-------------------CGA-------TTGCAAA---AAT---CC-TACAAA
droMoj3 scaffold_6500:26357110-26357382 - AACCTATTGCAAGGATGAGGTGGTCATACGGAACGCCGATTCGGGCAAGGGTAAGTATCA------GTT--------ACGTCTGATGCTCTGATCATTGAAAAGAGTACATTTATATATAAATATTTGA------------------CTATCTGCTGT--------T--------------------TG---------------------------------------------------CAAATCGTCCCAAAATAGTTATGGGCATTAAGGGCCGACGTGTACACATGATCGAGGAACTTAGCGAAACTATAATATCTTTTCAACGAGGTAAAACTTT-CGAA--AAAATCTCATCTAAGCTT---AAT-------AAGCATTT--AAT----AATGTCTA
droGri2 scaffold_15126:3723090-3723345 + AACCTACTGCAAAGATGAGGTCGTCATACGCAACGCCGACTCGGGCAAGGGTAAGTATTTC---TGAAT------TGT---------------------------TACTCCTCAT--------ATATAG-ACA-------CAC--GAGACTCTATTCTTCTGTTTTATATCTGCTGCCTGGCTGCCAAT----------------------------------------------------------------ATTAGTTATGGGCATTAAGGGCCGACGCGTACACATGATCGAGGAACTTAGCGAAACAATAATTTCCTTTCAAAGAGGTAAAAC-C---GACAGTA-------------------AACAACATTTTTGCACA---AAT---TGAACCTCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GACGTACTGCAAGGACGAGGTCGTGATTCGCAATGCCGACTCCGGCAAAGGTAAGTTTCT-GATCAGCTGAGGAGTGTTCTG---------------------GAGCACAAAGAT--------CTACAG-AAA--TGG-T-TTTCAATAATGTATTCC--------T--------------------CC---------------------------------------------------ATTCCCGTGGCCACAAAGTCATGGGCATCAAGGGGCGTCGCGTGCACATGATCGAGGAGCTAAGCGAAACCATTATATCGTTTCAAAGAGGTAACT--CC-AG----AG-------------------AGC-------TGGTTTT---AAT---TGATCCTCASizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
...............................................................................................................................................................................................................................................................AAGTCATGGGCATCAAGGGGC...............................................................................................................................2112.00220000000000000000
..............................................................................................................................................................................................................................................................................................CATGATCGAGGAGCTAAGCGA................................................................................................2112.00200020000000000000
..............................................................................................................................................................................................................................................................................................CATGATCGAGGAGCTAAGCGAAACC............................................................................................2512.00200200000000000000
.............................................................GATCAGCTGAGGAGTGTTCTG---------------------GAGCACA.....................................................................................................................................................................................................................................................................................................2812.00200000002000000000
....................................................................................................................................................................................................................................................................................GTCGCGTGCACATGATCGAGGAG........................................................................................................2311.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................CT--CC-AG----AG-------------------AGC-------TGGTTTT---AAT---T........2211.00100000010000000000
.ACGTACTGCAAGGACGAGGTCGG...........................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
.........................................................................................................................................................................................................................................................................................................AGCTAAGCGAAACCATTATATCG...................................................................................2311.00100000000000100000
..CGTACTGCAAGGACGAGGTCGT...........................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000001000
...........................................................................................................................................................................................................................................................................................GCACATGATCGAGGAGCTAAGCGAAAC.............................................................................................2711.00100010000000000000
...............................................AAGGTAAGTTTCT-GATCAGCT..............................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
droSec2
GACGTACTGTAAGGACGAGGTCGTGATTCGCAATGCCGACTCCGGCAAAGGTAAGTTTCT-AATCAGCTGAGGAGTGTTCTG---------------------GAGCACAAAGAT--------CTACAG-AAA--TGG-T-TTTCAATAATGTATTCC--------T--------------------CC---------------------------------------------------ATTCCCGTGGCCACAAAGTCATGGGCATCAAGGGGCGTCGAGTGCACATGATCGAGGAGCTAAGCGAAACTATTATATCGTTTCAAAGAGGTAACT--CC-AG----AG-------------------AGC-------TGGTTTT---AAT---TGATCCTCASizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
..........................................................................................................................................................................................................................................................................ATCAAGGGGCGTCGAGTG.......................................................................................................................1811.0010001
..............................................................................................................................................................................................................................................................AAAGTCATGGGCATCAAGGGGCGTC............................................................................................................................2511.0010001
...............................................................................................................................................................................................................................................................................GGGGCGTCGAGTGCACATGA................................................................................................................2011.0010100
...GTACTGTAAGGACGAGGTC.............................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
dm3
GACGTACTGCAAGGACGAGGTCGTGATTCGCAATGCTGACTCCGGCAAAGGTAAGTTTTTCAATCAGCTGAGGAGTGTTCTG---------------------GAGCACACAGAT--------CTACAG-AAA--TGG-T-TTTCAATAATGTATTCC--------T--------------------CC---------------------------------------------------ATTCCCGTGGCCAAAAAGTAATGGGCATCAAGGGGCGTCGCGTGCACATGATCGAGGAGCTAAGCGAAACCATTATATCGTTTCAAAGAGGTAACT--CC-AG----AG-------------------AGC-------TGGTTTT---AATTG-TGATCCTCASizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
.................................................................AGCTGAGGAGTGTTCTG---------------------GAGCACAC....................................................................................................................................................................................................................................................................................................2518.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000602000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................GTCGCGTGCACATGATCGAGGAGCTAAG...................................................................................................2816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................GCACATGATCGAGGAGCTAAGC..................................................................................................2215.0050000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................GTGCACATGATCGAGGAGCT......................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....................................................................................................................................................................................................................................................................................................CGAGGAGCTAAGCGAAACC............................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003
........................................................................................................................................................................................................................................................................................CGTGCACATGATCGAGGAGCT......................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................GTCGCGTGCACATGATCGAGGAGC.......................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000
.............GACGAGGTCGTGATTCGCAATGCTGACTC.........................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................AAGGGGCGTCGCGTGCAC....................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................ATGATCGAGGAGCTAAGCGAAACCATT.........................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GCGTCGCGTGCACATGATCGAG...........................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....ACTGCAAGGACGAGGTCGTGATTCGC....................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........................................................................................................................................................................................................................................................................................CGTGCACATGATCGAGGAGC.......................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GCGTCGCGTGCACATGATCGAGG..........................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GTACTGCAAGGACGAGGTCGTGATTCG.....................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TCGCAATGCTGACTCCGGCAAAG.................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GACGTACTGCAAGGACGAGGTCGTGATT.......................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................AGGGGCGTCGCGTGCACATGATCGA............................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................TCAAGGGGCGTCGCGTGCACATGA................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TACTGCAAGGACGAGGTCGTGATTCGC....................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GGTCGTGATTCGCAATGCTGACT..........................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................ATCGAGGAGCTAAGCGAAA..............................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................GGGCGTCGCGTGCACATGATCGAGG..........................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................C--------T--------------------CC---------------------------------------------------ATTCCCGTGGCCAA.....................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................AAAGAGGTAACT--CC-AG----AG-------------------AGC-------T........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AAGGACGAGGTCGTGATTCG.....................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................CACATGATCGAGGAGCTAAGCGAAACCAT..........................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CGTGATTCGCAATGCTGACTCCGGCA....................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....ACTGCAAGGACGAGGTCGTG..........................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CGTGATTCGCAATGCTGACTCCGGCAAAG.................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GATCGAGGAGCTAAGCGA................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................GCGAAACCATTATATCGTTTCAAAGAGG........................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
................................................................................................................................................................................................................................................................................................TGATCGAGGAGCTAAGCGAA...............................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................GGCGTCGCGTGCACATGATCGAGGAGCTA.....................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................TCGCGTGCACATGATCGAGGAGC.......................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................................................................................................................................................................................................................................................................................................GAGGAGCTAAGCGAAACCA...........................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................TCGAGGAGCTAAGCGAAACCA...........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......TGCAAGGACGAGGTCGTGA.........................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GAGGTCGTGATTCGCAATGCT..............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................AGCTAAGCGAAACCATTATATC....................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................AATGCTGACTCCGGCAAAGT................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................CAAGGGGCGTCGCGTGCAC....................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TGCAAGGACGAGGTCGTGATTCGC....................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................GCGAAACCATTATATCGTT.................................................................................1911.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TACTGCAAGGACGAGGTCGTG..........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GTACTGCAAGGACGAGGTC.............................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..............ACGAGGTCGTGATTCGCAATGCTGACT..........................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................AATGGGCATCAAGGGGCGT.............................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
GACGTACTGCAAGGACGAGGT..............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........................................................................................................................................................................................................................................................................CATCAAGGGGCGTCGCGT........................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................ACATGATCGAGGAGCTAAGCGA................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................TCGAGGAGCTAAGCGAAACCATTATA......................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................GGCGTCGCGTGCACATGATCGAGGA.........................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................AGCTAAGCGAAACCATTAT.......................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................GTCGCGTGCACATGATCGAGGA.........................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CGTACTGCAAGGACGAGGTCGT...........................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................GTCGCGTGCACATGATCGAGGAGCT......................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.............................................................AATCAGCTGAGGAGTGTTCTG---------------------GAGC........................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................CGTCGCGTGCACATGATCGA............................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................AAAGAGGTAACT--CC-AG----AG-------------------AGC-------TGGTTTT---...............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................ATGATCGAGGAGCTAAGCGAAAC.............................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001
................................................................................................................................................................................................................................................................................................TGATCGAGGAGCTAAGCGAAACCAT..........................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CTGCAAGGACGAGGTCGTGATTCGCC...................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................CATGATCGAGGAGCTAAGCGAAACC............................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................TCGCGTGCACATGATCGAGGAG........................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GGTCGTGATTCGCAATGCTGACTCCGG......................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................CGTGCACATGATCGAGGA.........................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...........................................................................................................................................................................................................................................................................TCAAGGGGCGTCGCGTGCACA...................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.............................................................................................................................................................................................................................................................................................ACATGATCGAGGAGCTAAGCG.................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..........................................................................................................................................................................................................................................................................................................................................GTAACT--CC-AG----AG-------------------AGC-------TGG......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................GGCATCAAGGGGCGTCGCGT........................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...............................AATGCTGACTCCGGCAAAG.................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................CTAAGCGAAACCATTATATCGT..................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................CATCAAGGGGCGTCGCGTG.......................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................GGTCGTGATTCGCAATGCTGA............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTAAGTTTTTCAATCAGCTGAGGA.........................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............ACGAGGTCGTGATTCGCA...................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................AAAGTAATGGGCATCAAGGGGCGG.............................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................AGGGGCGTCGCGTGCACA...................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.....ACTGCAAGGACGAGGTCGTGA.........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................GCGTGCACATGATCGAGGAGCT......................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................GGGCGTCGCGTGCACATGATCG.............................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................AGC-------TGGTTTT---AATTG-TGATCCT..2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GAGGTCGTGATTCGCAAT.................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................GTGCACATGATCGAGGAGCTAAG...................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................GAGGAGCTAAGCGAAACCATT.........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................AAGGGGCGTCGCGTGCACATGATCGA............................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................GAGGTAACT--CC-AG----AG-------------------AGC-------TGGT.....................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........AGGACGAGGTCGTGATATC.....................................................................................................................................................................................................................................................................................................................................................................................19140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GACGTACTGCAAGGACGAGGTCGTGATTCGCAATGCCGACTCCGGCAAAGGTAAGTTTCT-GATCAGCTGAGGAGTGTTCTG---------------------GAGCACACAGAT--------CTATAA-AAA--TGG-T-TTTAAATAATGAATTCC--------T--------------------CC---------------------------------------------------ATTGCCGTGGCCACAAAGTCATGGGCATCAAGGGGCGTCGCGTGCACATGATCGAGGAGCTAAGCGAAACCATAATATCGTTTCAAAGAGGTAACC--CC-AG----AA-------------------AGC-------TGGTTTT---AAT---TGACCCTCASizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
.................................................................AGCTGAGGAGTGTTCTG---------------------GAGCACACA...................................................................................................................................................................................................................................................................................................2611.0010000100
GACGTACTGCAAGGACGAGGTCGTGATT.......................................................................................................................................................................................................................................................................................................................................................................................2811.0010000100
..........................................................................................................................................................................................................................................................................................................GCTAAGCGAAACCATAATATCGT..................................................................................2311.0010000100
..............................................................................................................................................................................................................................................................................................CATGATCGAGGAGCTAAGC..................................................................................................1911.0010000100
.......................................................................................................................................................................................................................................................................................GCGTGCACATGATCGAGGAGC.......................................................................................................2111.0010000100
..CGTACTGCAAGGACGAGGTCGTGA.........................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
.........................................................................................................................................................................................................................................................................................................AGCTAAGCGAAACCATAATATC....................................................................................2211.0010000010
droYak3
AACTTACTGCAAGGACGAGGTCGTGATTCGCAACGCCGACTCCGGCAAAGGTAGGTTACT-GATCAGCTGAGGAGTGTTCTT---------------------GAGCACACAGAT--------CTATAAAAAA--TGG-T-TTTAAATAATGTATTAC--------T--------------------CC---------------------------------------------------ATTCCCATGGCCACAAAGTCATGGGCATCAAGGGGCGTCGCGTGCACATGATCGAGGAGCTAAGCGAAACCATAATATCGTTTCAAAGAGGTAACT--CC-AG----AA-------------------AGC-------TGGTTTT---AAT---TGACCCTCASizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
....................................................................................................................................................................................................................................................................................GTCGCGTGCACATGATCGAGGAGC.......................................................................................................2411.00100000010000
.....................CGTGATTCGCAACGCCGACTC.........................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.............................................................................................................................................................................................................................................................................................................AAGCGAAACCATAATATCGT..................................................................................2011.00100000010000
.............................................................................................................................................................................................................................................................................................................AAGCGAAACCATAATATCGTTTCAAAGAGT........................................................................3011.00100000000001
....................................................................................................................................................................................................................................................................ATGGGCATCAAGGGGCGTCGCGT........................................................................................................................2311.00101000000000
AACTTACTGCAAGGACGAGGTCGT...........................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.........................................................................................................................................................................................................................................................................................GTGCACATGATCGAGGAGCTAAGCGA................................................................................................2611.00100000010000
....TACTGCAAGGACGAGGTCGT...........................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...........................................................................................................................................................................................................................................................................................GCACATGATCGAGGAGCTAAGCGA................................................................................................2411.00101000000000
........GCAAGGACGAGGTCGTGATT.......................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
droEug1
GACGTACTGCAAGGACGAGGTCGTAATTCGCAATGCCGACTCCGGCAAAGGTAAGTTTTC---TCAAGTGAGGAGTAACCCG---------------------GATACCCCTGAT--------ATTTGA-ACA--TTA-ATTTAAAAATATATATTCC--------A--------------------CT---------------------------------------------------TAACCCGTGGCCACAAAGTTATGGGCATCAAGGGGCGACGCGTGCACATGATCGAGGAACTAAGCGAAACCATAATATCGTTTCAAAGAGGTAACCT-CC-AG----C--------------------AGC-------TGGTTTT---AAT---TG-TCCTCASizeHit CountTotal NormTotal
No Reads
droBia1
GACGTACTGCAAGGATGAGGTCGTGATTCGCAACGCCGACTCCGGCAAAGGTGAGTTCTC--CCCGGCCTAGAAGTGAGCCG---------------------GAACACTTTGAT--------CTTTGA-TTA--TGA-ATTTATAAAAATGTATTCC--------T--------------------CA---------------------------------------------------TACCCCGTGGCCACGAAGTCATGGGCATCAAGGGGCGACGCGTGCACATGATCGAGGAACTTAGCGAAACCATAATATCGTTTCAAAGAGGTAACCC-CC-AG----AA-------------------GGC-------TGGTTTT---AAT---TC-TCCTCASizeHit CountTotal NormTotal
No Reads
droTak1
-------------------------------------------------------------------------------CTG---------------------AAACACACTGAT--------CTTTGA-AAA--TGA-ATCT--AAAAATGTATTCC--------A--------------------AA--------------------------------------A------------AATCCCGTGGCCACAAAGTCATGGGCATCAAGGGGCGACGCGTGCACATGATCGAGGAACTAAGTGAAACCATAATATCGTTTCAAAGAGGTAAACG-CC-AG----AA-------------------AGC-------TGGTTTT---AAT---TG-TCCTCASizeHit CountTotal NormTotal
No Reads
droEle1
GACGTACTGCAAGGACGAGGTCGTGATCCGCAACGCTGACTCTGGAAAAGGTGAGTATTCCG--CGTTTGAGAAGTGTCCTT---------------------GAA--CACTGAT--------CTTTAA-A----TTGAACTT--GATAACGTATTCC--------A--------------------CT---------------------------------------------------AATCTCGTGGCCACAAAGTCATGGGCATCAAAGGGCGACGCGTGCACATGATCGAGGAACTTAGCGAAACCATAATATCGTTTCAAAGAGGTAACCC-CC-AG----AA-------------------AGC-------TGGTTTT--CAAT---TG-TCCTCASizeHit CountTotal NormTotal
No Reads
droRho1
GACGTACTGCAAGGACGAGGTCGTGATTCGCAACGCTGACTCTGGAAAAGGTGAGTATCTC---TGGCTGAGCAGTGTCCTC---------------------GAA--CACTGAT--------TTTTGA-ATA--TGA-ACTT--GAAAATGTATTCC--------A--------------------CT---------------------------------------------------AATCCCGTGGCCACAAAGTCATGGGCATCAAGGGGCGACGCGTGCACATGATCGAGGAACTTAGCGAAACCATAATATCGTTTCAAAGAGGTAACAC-CCAGG----AA-------------------AGC-------TGGTTTT--GAAT---TC-TCCTCASizeHit CountTotal NormTotal
No Reads
droFic1
GACTTATTGCAAGGATGAGGTCGTGATTCGCAACGCTGATTCCGGAAAAGGTGAGTTTTC-G--CAGATATGAAGTGTCCTA---------------------GAAGACACTGTT--------TTATGA-TTA--TGA-T-TT--AAAAATGTATTCC--------T--------------------CC---------------------------------------------------AATTCCGTGGCCACAAAGTCATGGGCATCAAGGGGCGACGCGTGCACATGATCGAGGAACTTAGCGAAACCATAATATCGTTTCAAAGAGGTAACC--CC-AG----AA-------------------GGC-------TGGTTTT-TCTAT---TG-TCCTCASizeHit CountTotal NormTotal
No Reads
droKik1
GACGTACTGCAAGGACGAGGTGGTTATACGCAACGCAGACTCCGGCAAGGGTGAGTATCAG---CGGCTG---ATTGGTTAG---------------------GAACAC-TTAAT--------ATTTGA-ATATATTG---TT--GAAAATGTATTTT--------A--------------------CA--------------------------------------AACCAAAATATATAACCCCCTGACC-CGTAGTCATGGGCATCAAAGGTCGACGCGTGCACATGATCGAGGAGCTTAGCGAAACCATAATATCGTTTCAAAGAGGTAACCT-CCCAG----AA-------------------CTC-------TGGGTTC--AAATAGTCGAT-TCTASizeHit CountTotal NormTotal
No Reads
droAna3
GACATATTGCAAGGACGAAGTGGTAATCCGCAATGCGGACTCCGGAAAGGGTAAGTAGTCC---GGACTGAGA-----CC-----------------CCATGA-TG--AACTGAT--------CTTTA-----------------AAAAGTATATTCC--------A--------------------AA---------------------------------------------------AATCCCGTGGCCATAAAGTCATGGGTATCAAGGGTCGCCGCGTGCACATGATCGAGGAACTTAGCGAAACAATAATATCGTTTCAAAGAGGTAACCC-AC-CG----AA-------------------TGT-------CGGTCTT-GAGAT---TA-AACCCASizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
...............CGAAGTGGTAATCCGCAATGC...............................................................................................................................................................................................................................................................................................................................................................................2111.001001000
.......TGCAAGGACGAAGTGGTAATC.......................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
...................................................................................................................................................................................................................................................................CATGGGTATCAAGGGTCGCCGCGTGCA.....................................................................................................................2711.001100000
..............................................................................................................................................................................................................................................................................................CATGATCGAGGAACTTAGCGA................................................................................................2111.001100000
........GCAAGGACGAAGTGGTAATCC......................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
.......................................................................................................................................................................................................................................................................................GCGTGCACATGATCGAGGAACT......................................................................................................2211.001000010
..........................................................................................................................................................................................................................................................................ATCAAGGGTCGCCGCGTGCACA...................................................................................................................2211.001000001
...................................................................................................................................................................................................................................................................................................................AACAATAATATCGTTTCAAAGA..........................................................................2211.001000010
..............................................................................................................................................................................................................................................................................AGGGTCGCCGCGTGCACATGATCGAGG..........................................................................................................2711.001000001
..........AAGGACGAAGTGGTAATCCGCAATGCG..............................................................................................................................................................................................................................................................................................................................................................................2711.001010000
droBip1
GACATATTGCAAGGATGAAGTGGTCATCCGTAACGCGGACTCCGGCAAGGGTAAGTATTCC---GGACTGAGA-----CC-----------------CCAAGA----CATCTGAT--------CTTT------------------AAAAGTATATTCC--------A--------------------AA---------------------------------------------------AATGCCATGGCCATACAGTCATGGGTATCAAGGGTCGCCGCGTGCACATGATCGAGGAACTTAGCGAAACAATAATATCGTTTCAAAGAGGTAACCC-AC-CG----AA-------------------TGT-------CGGTTTA--AGAT---TA-AACCCASizeHit CountTotal NormTotal
No Reads
dp5
AACCTACTGCAAGGACGAGGTGGTAATCCGCAATGCTGATTCGGGCAAAGGTGAGTGTGTC---------------------TCTTGCCACCATTCCCCAAAACTGAAC-TTAAT--------CTTTGA----------------ACAAATGTATTCT--------A-------------------------------------------------------------------------AATCCCATGTCTGCTCAGTCATGGGCATCAAAGGGCGACGCGTCCACATGATTGAGGAGCTAAGCGAAACTATCATATCGTTTCAAAGAGGTAACGC-CC-AG----ATCCTTCTCTCTCAGCCTGTTCGC-------TAGACCTA--AG----GACTACCCASizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
...........................................................................................................................................................................................................................................................................................CCACATGATTGAGGAGCTAAGCGA................................................................................................2411.0010100000000
...........AGGACGAGGTGGTAATCCGCAATGCTG.............................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
.............GACGAGGTGGTAATCCGCAATGCT..............................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
..............................................................................................................................................................................................................................................................................................CATGATTGAGGAGCTAAGCGAA...............................................................................................2211.0010100000000
.................................................................................................................................................................................................................................................................................................GATTGAGGAGCTAAGCGAAACT............................................................................................2211.0010000001000
.........................................................................................................................................................................................................................................................................CATCAAAGGGCGACGCGTCCAC....................................................................................................................2211.0010100000000
droPer2
AACCTACTGCAAGGACGAGGTGGTAATCCGCAATGCTGATTCGGGCAAAGGTGAGTGTGTC---------------------TCTTGCCACCATTCCCCAAAACTGAAC-TTAAT--------CTTTGA----------------ACAAATGTATTCT--------A-------------------------------------------------------------------------AATCCCATGTCTGCTCAGTCATGGGCATCAAAGGGCGACGCGTCCACATGATTGAGGAGCTAAGCGAAACTATCATATCGTTTCAAAGAGGTAACGC-CC-AG----ATCCTTCTCTCTCAGCCTGTTCGC-------TAGACCTA--AG----GACTACCCASizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
........................................................................................................................................................................................................................................................GTCTGCTCAGTCATGGGCATCAAAGGGC...............................................................................................................................2813.003300000
.................................................................................................................................................................................................................................................................GTCATGGGCATCAAAGGGC...............................................................................................................................1912.002200000
......CTGCAAGGACGAGGTGGTAATCCGCA...................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
....TACTGCAAGGACGAGGTGGTAAT........................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
................................................................................................................................................................................................................................................................................................TGATTGAGGAGCTAAGCGAAACTATCA........................................................................................2711.001000001
.ACCTACTGCAAGGACGAGGTGGTAAT........................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.............GACGAGGTGGTAATCCGCAATGCT..............................................................................................................................................................................................................................................................................................................................................................................2411.001010000
..................................................................................................................................................................................................................................................................................GCGACGCGTCCACATGATTGAGGA.........................................................................................................2411.001000001
droWil2
AACCTATTGCAAGGATGAGGTGGTTATACGTAATGCCGATTCGGGCAAAGGTAAAAAGGC-------------------TAT---------------------AAACGC-AAAAA--------AA-AAA-AAATACTA---TT--G-----------T--------T--------------------AT----------------ATTCCATGCAAATCTTATAATAAATCAAAAT--------ATTTGCATATTCAGTTATGGGCATTAAAGGCCGACGTGTACACATGATTGAGGAACTTAGCGAAACAATAATATCGTTCCAAAGAGGTAAAAC-CA-AA----GA-------------------TGT-------TGGCTTA---AAT---AA-TC----SizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
..........................................................................................................................................................................................................................................................................................................................................GTAAAAC-CA-AA----GA-------------------TGT-------TG.......................1811.00100010
...............................................................................................................................................................................................................................................................................AGGCCGACGTGTACACATGATTGAGG..........................................................................................................2611.00100010
....................................................................................................................................................................................................................................................................................GACGTGTACACATGATTGA............................................................................................................1911.00100100
..............................................................................................................................................................................................................................................................................................CATGATTGAGGAACTTAGC..................................................................................................1911.00100010
...........................................................................................................................................................................................................................................................................................ACACATGATTGAGGAACTTAGCGA................................................................................................2411.00100001
.....................................GATTCGGGCAAAGGTAAAAAG.........................................................................................................................................................................................................................................................................................................................................................2111.00100100
...............................................................................................................................................................................................................................................................................................ATGATTGAGGAACTTAGCGAAAC.............................................................................................2311.00110000
...........................................................................................................................................................................................................................................................................TTAAAGGCCGACGTGTACACATG.................................................................................................................2311.00100010
....................................................................................................................................................................................................................................................................................................TGAGGAACTTAGCGAAACAAT..........................................................................................2111.00101000
................................................................................................................................................................................................................................................................................GGCCGACGTGTACACATGATTGAGG..........................................................................................................2511.00100010
............................................................................................................................................................................................................................................................................................CACATGATTGAGGAACTTAGCGAA...............................................................................................2411.00100010
AACCTATTGCAAGGATGAGGTGGT...........................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
..............ATGAGGTGGTTATACGTAATGCCG.............................................................................................................................................................................................................................................................................................................................................................................2411.00100010
...........................................................................................................................................................................................................................................................................................................CTTAGCGAAACAATAATATCGTT.................................................................................2311.00100100
...............................................................................................................................................................................................................................................................................................ATGATTGAGGAACTTAGCGAAA..............................................................................................2211.00110000
..........................................................................................................................................................................................................................................................................ATTAAAGGCCGACGTGTA.......................................................................................................................1811.00100010
............................................................................................................................................................................................................................................................................TAAAGGCCGACGTGTACACATGATT..............................................................................................................2511.00100100
............................................................................................................................................................................................................................................................................TAAAGGCCGACGTGTACACAT..................................................................................................................2111.00100001
.................................................................................................................................................................................................................................................................................GCCGACGTGTACACATGATTGAGGAACC......................................................................................................2811.00110000
................................................................................................................................................................................................................................................................................................TGATTGAGGAACTTAGCGAAACAA...........................................................................................2411.00100100
..................................................................................................................................................................................................................................................................................................ATTGAGGAACTTAGCGAAACA............................................................................................2111.00100010
............................................................................................................................................................................................................................................................................................CACATGATTGAGGAACTTAGCGAAACA............................................................................................2711.00110000
..........................................................................................................................................................................................................................................................................ATTAAAGGCCGACGTGTACA.....................................................................................................................2011.00100100
.................................................................................................................................................................................................................................................................................GCCGACGTGTACACATGATTGAGGAACT......................................................................................................2811.00110000
..................................................................................................................................................................................................................................................................................................ATTGAGGAACTTAGCGAAA..............................................................................................1911.00100100
droVir3
GACCTATTGCAAGGATGAGGTGGTCATACGCAACGCCGACTCTGGCAAGGGTAAGTATATC---GGTTCGGGT---GCTGCC---------------------GA------------------CTACCG-GAT--GCG-C-TTCC---------------------A--------------------ACATTCTTATGTCTTACT----------------------AA-----------ATAA----ACTCAAATAGTTATGGGCATTAAGGGCCGACGCGTACACATGATCGAGGAACTTAGCGAAACTATAATATCCTTTCAAAGAGGTAAAAC--A-AA----AA-------------------CGA-------TTGCAAA---AAT---CC-TACAAASizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
..........................................................................................................................................................................................................................................................................................TACACATGATCGAGGAAC.......................................................................................................1812.002000000000000000000000000000000000200000000000000000000000000000
...............................................................................GCC---------------------GA------------------CTACCG-GAT--GCG-C-TTC...................................................................................................................................................................................................................................................................2112.002000000000000000000000000000000000000000000000000000000000000002
....................................................................................................................................................................................................................................................................................................CGAGGAACTTAGCGAAAC.............................................................................................1812.002020000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TGATCGAGGAACTTAGCG.................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................GCCGACGCGTACACATGATCGAGGAACTTAGC..................................................................................................3211.001000000000000000000000000000000000000000000000100000000000000000
........................................................................................................................................................................................................................................................................................CGTACACATGATCGAGGA.........................................................................................................1811.001000000000000000010000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................GACGCGTACACATGATCGAGGAACTT.....................................................................................................2611.001100000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................AA-----------ATAA----ACTCAAATAGTTATGGGCA........................................................................................................................................2511.001000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................GAGGAACTTAGCGAAACT............................................................................................1811.001000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................GGCCGACGCGTACACATGATCGAGGAACTTAGCGAAACTAT..........................................................................................4111.001000000000000000000000000000000000000000000000000100000000000000
.................................................................................................................................................................................................................................................................................GCCGACGCGTACACATGATCGAGGAACTTAG...................................................................................................3111.001000000000000000000000000000000000000000000001000000000000000000
...............................................................................................................................................................................................................................................................................................ATGATCGAGGAACTTAGC..................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................CATTAAGGGCCGACGCGTAC......................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.........................ATACGCAACGCCGACTCTGGC.....................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................ACACATGATCGAGGAACTTAGCGA................................................................................................2411.001000000000000000000100000000000000000000000000000000000000000000
....................TGGTCATACGCAACGCCGACTCTGGC.....................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................TTAGCGAAACTATAATATC....................................................................................1911.001000000000000000000100000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................ATCGAGGAACTTAGCGAAACTATA.........................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................AACTATAATATCCTTTCAAAGA..........................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AGGAACTTAGCGAAACTA...........................................................................................1811.001000000000000000000000000010000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................GCGTACACATGATCGAGGAACT......................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.......TGCAAGGATGAGGTGGTC..........................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000100000000000000000000000000000000000000000000000000000
.....................................................AGTATATC---GGTTCGGGT---G......................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000100000000000000000000000000000000000000
......................................................................................................................................................................................................TCTTACT----------------------AA-----------ATAA----ACTCAAATAGAA...............................................................................................................................................2511.001000000000000000000000000000010000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................CCGACGCGTACACATGATCGAGGAAC.......................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000100
.....................................................................................................................................................................................................................................................................................ACGCGTACACATGATCGAGGAACT......................................................................................................2411.001100000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................AGGGCCGACGCGTACACA...................................................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
......................GTCATACGCAACGCCGACT..........................................................................................................................................................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
droMoj3
AACCTATTGCAAGGATGAGGTGGTCATACGGAACGCCGATTCGGGCAAGGGTAAGTATCA------GTT--------ACGTCTGATGCTCTGATCATTGAAAAGAGTACATTTATATATAAATATTTGA------------------CTATCTGCTGT--------T--------------------TG---------------------------------------------------CAAATCGTCCCAAAATAGTTATGGGCATTAAGGGCCGACGTGTACACATGATCGAGGAACTTAGCGAAACTATAATATCTTTTCAACGAGGTAAAACTTT-CGAA--AAAATCTCATCTAAGCTT---AAT-------AAGCATTT--AAT----AATGTCTASizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
........................CATACGGAACGCCGATTCGGGCAAG..................................................................................................................................................................................................................................................................................................................................................................2511.001000001
......................GTCATACGGAACGCCGATTCGGGC.....................................................................................................................................................................................................................................................................................................................................................................2411.001100000
..................................................................................................................................................................................................................................................................................................ATCGAGGAACTTAGCGAA...............................................................................................1811.001100000
........................CATACGGAACGCCGATTCGGGC.....................................................................................................................................................................................................................................................................................................................................................................2211.001100000
....................TGGTCATACGGAACGCCGATTCGGGCAAG..................................................................................................................................................................................................................................................................................................................................................................2911.001000001
.............GATGAGGTGGTCATACGGAACGCC..............................................................................................................................................................................................................................................................................................................................................................................2411.001000001
..........................................................................................................................................................................................................................................................................................TACACATGATCGAGGAACTTAGCGA................................................................................................2511.001100000
.....ATTGCAAGGATGAGGTGGTCATACG.....................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
droGri2
AACCTACTGCAAAGATGAGGTCGTCATACGCAACGCCGACTCGGGCAAGGGTAAGTATTTC---TGAAT------TGT---------------------------TACTCCTCAT--------ATATAG-ACA-------CAC--GAGACTCTATTCTTCTGTTTTATATCTGCTGCCTGGCTGCCAAT----------------------------------------------------------------ATTAGTTATGGGCATTAAGGGCCGACGCGTACACATGATCGAGGAACTTAGCGAAACAATAATTTCCTTTCAAAGAGGTAAAAC-C---GACAGTA-------------------AACAACATTTTTGCACA---AAT---TGAACCTCASizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
..................................................................................................................................................................................................................................................................................................ATCGAGGAACTTAGCGAAACA............................................................................................2111.00101

Generated: 05/18/2015 at 07:55 PM