ID:

dsi_20550

 Coordinate:

2l:1653340-1653489 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.6 -6.6 -6.6

Flybase annnotation

CDS [2l_1652025_1653339_-]; exon [2l_1651661_1653339_-]; intron [2l_1653340_1654327_-]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TGGAACAATTCCATCTGTAGATTTGAATAAGCTTAAGTGTATTTAAGTAATGGCAGGGATTTCGGGAATATTCTGGAGCAATTCCTCCTATAATTCTAAATGGCTTCATCTGTGGTCAGCTATTTGATAGAACACAATGCCTAGATCGAAAGCCCTGATAGCATACACTAACTCGCCCTTTTGGACTTTGTTTTTGGCAGTGACAGCAACGAGATGACCATCAAAGCGATCAAGGCCCGTCAGATCTACG
*******************************************************************************************************************************************.(((((...((((((..((..((............))..))..)).))))...)))))..*************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body		 M025
embryo
 M053
female body
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 O001
Testis
 SRR553488
RT_0-2 hours eggs
 O002
Head
......................................................................................................................................................................................................TGTGACAGCAACGAGATGACCATCAA.......................... 26 1 1 4.00 4 0 0 0 0 3 0 0 0 0 1 0 0 0 0
......................................GTATTTAAGGATTGGCAGGGA............................................................................................................................................................................................... 21 2 1 4.00 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GACCATCAAAGCGATCAAGGCC............. 22 0 1 4.00 4 0 0 2 0 0 0 0 0 0 2 0 0 0 0
...................................................................................................................................................................................TTTGGACTTTGTTTTTGGCAGT................................................. 22 0 1 4.00 4 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................CATCAAAGCGATCAAGGCC............. 19 0 1 3.00 3 1 0 1 0 0 0 0 0 0 0 0 0 0 1
...................................................................................................................................................................................TTTGGACTTTGTTTTTGGCAGC................................................. 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TGGCAGGGATTTCGGGAATG.................................................................................................................................................................................... 20 1 1 3.00 3 0 0 0 0 0 0 0 0 3 0 0 0 0 0
..................................................................................................................................................................................................................GAGATGACCATCAAAGCGATCAAGGAA............. 27 2 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................CATCAAAGCGATCAAGGCCCGTC......... 23 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TGACCATCAAAGCGATCAAGGCCCGT.......... 26 0 1 2.00 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................ATCAAAGCGATCAAGGCCCGTCAGA...... 25 0 1 2.00 2 0 0 0 0 0 0 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................AAGCGATCAAGGCCCGTCAGATCTAC. 26 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................TCAAGGCCCGTCAGATCTAC. 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................TGTGACAGCAACGAGATGACCATC............................ 24 1 1 2.00 2 0 0 0 0 1 0 0 0 0 0 0 0 1 0
...............................................................................................................................................................................................................................AAGCGATCAAGGCCCGTCAGATCT... 24 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................ATCAAAGCGATCAAGGCC............. 18 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................ACCATCAAAGCGATCAAGGCC............. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................ATCAAAGCGATCAAGGCCCGTCAGATC.... 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GACCATCAAAGCGATCAAGGC.............. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GTGACAGCAACGAGATGACCAT............................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................AAAGCGATCAAGGCCCGT.......... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................CCTAGATCGAAAGCCCTGATAGCATA..................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................CGAGATGACCATCAAAGCTATC................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TTGTGACAGCAACGAGATGACCATCAA.......................... 27 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................CGAGATGACCATCAAAGCGATCAAGGC.............. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GACCATCAAAGCGATCAAGGCCCGTC......... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................GATCAAGGCCCGTCAGATCTAC. 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CCATCAAAGCGATCAAGGC.............. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................CAACGAGATGACCATCAAAGCGATC................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................AGCATACACTAACTCGCC......................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.............................................................................................................................................................................................................................CAAAGCGATCAAGGCCCGTCAGATC.... 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................ATGACCATCAAAGCGATCAAGGCC............. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................TTTGGACTTTGTTTTTGGCA................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................GGGATTTCGGGAATATTCTGGAGC........................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................ATCAAAGCGATCAAGGCCCGTCAGC...... 25 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TTGGACTTTGTTTTTGGCAG.................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................TCAAAGCGATCAAGGCCCGTCAGA...... 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................AGCGATCAAGGCCCGTCAGATCT... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................GAAAGCCCTGATAGCATA..................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................GATCAAGGCCCGTCAGAT..... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................GCCTAGATCGAAAGCCCTGATAG......................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
........................................................................................................................................................................................................TGACAGCAACGAGATGACCATCAAAGCGA..................... 29 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................CTTTTGGACTTTGTTTTTGGCAG.................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................GCCTAGATCGAAAGCCCTGATAGCAGA..................................................................................... 27 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................CATCAAAGCGATCAAGGCCCGTCA........ 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................TGTGACAGCAACGAGATGAC................................ 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................................CGCCCTTTTGGACTTTGTTTTTGGCAG.................................................. 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................AAAGCGATCAAGGCCCGTCAGATCC... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................ATAGAACACAATGCCTAGATCGAAAGCC................................................................................................ 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GACCATCAAAGCGATCAAG................ 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................TTTTGGACTTTGTTTTTGGCA................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................ATCAAAGCGATCAAGGCCCGTCAGATCT... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
....ACAATTCCATCTGTAGATTTGAA............................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GACCATCAAAGCGATCAAGGCCCGG.......... 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................CAAAGCGATCAAGGCCCGT.......... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................ATCAAAGCGATCAAGGCCCGTCA........ 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................ATGCCTAGATCGAAAGCCCTGATAG......................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
........................................................................................................................................ATGCCTAGATCGAAAGCC................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................TGCCTAGATCGAAAGCCCTG............................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................TGACCATCAAAGCGATCAAGGCCCGTCAGA...... 30 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................CCTTTTGGACTTTGTTTTTGGCA................................................... 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........TTCCATCTGTAGATTTGAAT.............................................................................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................ATTTGATAGAACACAATGCCT............................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................GATGACCATCAAAGCGATCAA................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................ACGAGATGACCATCAAAGCGATCAA................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.......ATTCCATCTGTAGATTTGAATAAGCTT........................................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GACCATCAAAGCGATCAAGGCCCGTGG........ 27 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................GAACACAATGCCTAGATCGAAAGCC................................................................................................ 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................AGAACACAATGCCTAGATCGAAAGC................................................................................................. 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TGACCATCAAAGCGATCAAGGCC............. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................ATCAAAGCGATCAAGG............... 16 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................ACACAATGCCTAGATCGAAAGCC................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................AAGCGATCAAGGCCCGTCAGATCC... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GTGACAGCAACGAGATGAC................................ 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TTGTGACAGCAACGAGATGACCATCAAAGC....................... 30 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................ATCAAAGCGATCAAGGCCCGTCAG....... 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................TGTGACAGCAACGAGATGACC............................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...................................................................................................................................................................................................................ACACGACGATCAAAGCGATCAA................. 22 3 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
......................................GTATTTAAGGATTGGCAGGGG............................................................................................................................................................................................... 21 3 5 0.40 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................GCAGTGAGCGCAACGAGA.................................... 18 2 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..............................................GTAATGGAAGGGTTTTCGGGT....................................................................................................................................................................................... 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................GGACAGCTTTTTGATAGA....................................................................................................................... 18 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................................................................TCAAGTCCCGTCATAGCTA.. 19 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
..................................................................................................................................................................................................................GAGATGACCATCGAAGAGCTC................... 21 3 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GACACCAATGAGATGACC............................... 18 2 10 0.10 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................................ACGATGCCTAGACCGTAAG.................................................................................................. 19 3 11 0.09 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................AAAGCGATCAAGGCA............. 15 1 12 0.08 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..................AGATTCGAATGAACTTAAGT.................................................................................................................................................................................................................... 20 3 14 0.07 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...........CATATGAAGATTTGAATA............................................................................................................................................................................................................................. 18 2 17 0.06 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................TTAGAATAAGCTTTAGTGTATT............................................................................................................................................................................................................... 22 2 19 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................AACACAATGGCTAGCTC....................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................................................................................................................CAAGTCCCGTCATATCCA.. 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.........................................................................................ATAATTCTAAAGGGCGACA.............................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................TAAATGGGTTCATCAGT......................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

ACCTTGTTAAGGTAGACATCTAAACTTATTCGAATTCACATAAATTCATTACCGTCCCTAAAGCCCTTATAAGACCTCGTTAAGGAGGATATTAAGATTTACCGAAGTAGACACCAGTCGATAAACTATCTTGTGTTACGGATCTAGCTTTCGGGACTATCGTATGTGATTGAGCGGGAAAACCTGAAACAAAAACCGTCACTGTCGTTGCTCTACTGGTAGTTTCGCTAGTTCCGGGCAGTCTAGATGC
***************************************************.(((((...((((((..((..((............))..))..)).))))...)))))..******************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 O001
Testis
 O002
Head
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
ACCTTGTTAAGGTAG........................................................................................................................................................................................................................................... 15 0 2 4.00 8 8 0 0 0 0
ACCTTGTTAAGGTAGA.......................................................................................................................................................................................................................................... 16 0 2 1.50 3 3 0 0 0 0
..................................................................................AGGGGGATATTAAGATTTACAGAAG............................................................................................................................................... 25 2 1 1.00 1 0 0 0 1 0
.......................................................CCCTAAAGCCCTTATAAGACC.............................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0
....................................................................................................................................................................................................................CTACTGGTAGTTTCGCTAGTTC................ 22 0 1 1.00 1 0 0 1 0 0
ACCTTGTTAAGGTAGAC......................................................................................................................................................................................................................................... 17 0 2 1.00 2 2 0 0 0 0
......................................................................................................................................................................TGATTCAGCGGGATAA.................................................................... 16 2 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:1653290-1653539 - dsi_20550 TGGAA-CAAT-TCCATCTGTA---------------------------------------------GATTTGAATAAGC-T-TAAGTGTATTTAAGTAATGGCAGGGATTTCGGGAATATTCTGGAGCAATTCCTCCT---ATAATTCTAAATGGCTTCATCTGTGGTCAGCTATTTGA-------TAGAAC-----ACAATGCCTAG--ATCGAAAGCCCTGATAGCA--TACACTAACTCGC---CCTT-TTGGACTTT-------GT-TTT----TGGCAGTGAC---AGCAACGAGATGACCATCAAAGCGATCAAGGCCCGTCAGATCTACG
droSec2 scaffold_14:1660802-1661035 - TAGATT----------------------------------------------------------------TGAATGAGTGT-TAAGTGTATTTAAATAATGGCAGGGATTTCGGGAATATTCTGGAGCAATTCCTCCT---ATAATTCTAAATGGCTTCATCTGTGGTCAGCTATTTGA-------TAGAAC-----ACCATGCCTAG--ATTGAAAGCCCTGATAGCA--GACACTAACTCGC---CCTT-TTGGACTTT-------GT-TTT----TGGCAGTGAC---AGCAACGAGATGACCATCAAAGCGATCAAGGCCCGTCAGATCTACG
dm3 chr2L:1726606-1726847 - TAAATA----------------------------------------------------------------TAAATAAGC-C-CAA--CTATTTAAGTAATGGCGGGGATTTCGCAAATATTGTGGAGCACATCCGCCA---TAAAATCTGAATGGCTTCATCTGCGGTCAGCTATTTAA-------TAGAAC-----ACCATGCCTAG--ATTTAAAGTCCTGATAACA--GACACTAATTCGC---CCTC-GTGGACTTTGTTTTTTGT-TTTTTGATTTCAGTGAC---AGCAACGAGATGACCATCAAAGCGATCAAGGCCCGTCAAATCTACG
droEre2 scaffold_4929:1769846-1770072 - AAGC---AGC----------------------------------------------------------------------T-CCA--GTTTTCAAGCAATGGCGGGAATTTCGGGAATATTCTGGAGCACATCCACCA---CTCAAACTGAAAGGCCTCGTCTGCGGTCAGCCATTTGA-------TAGAAC-----ACCATGCCTAG--ATTGAAACCCCTGATAGCA-AAACACTAATTCGCCGTCCTC-GTGGACTTT-------GG-TTT----TTGCAGTGAC---AGCAACGAGATGACCATCAAAGCAATCAAGGCCCGTCAGATCTACG
droYak3 2L:1697285-1697533 - GG----CCA------TC-GTT---------------------------------------------GAATTGAAAAACC-T-CAG--GTTTTCAAGCAATGACGGGGATTTCGGGAATATTCTGGAGCACATCCACCA---TTGCCACCGAAAGGCCTCGTCTGCGGTCAGCCATTTGA-------TAGAAC-----ACCATGCCCAG--ATTGAAACCCCTGATAGCA--ATCACTAATTCGACGTTCTC-ATGGACTTTGGTTTTTGG-TTT----TTGCAGTGAC---AGCAACGAGATGACCATCAAAGCGATCAAGGCCCGTCAGATCTACG
droEug1 scf7180000407252:52055-52263 + A-------------------------------------------------------------------------------------------------ATGTCTGGGTTTTCGGGAATATTCTGGTGCCCATCAAACA---TGAATTTTAATGGAGATTATCTGCGGTCAGCTGTT-GTTATT--------TTAGACACCATGCTTAG--ATTAAAATTGTTGATAGTA-AAAGACTAATTTGTGTTTTTT-GTGGACTTT-------GA-TTT----TTGCAGTGAC---AGCAACGAGATGACCATCAAAGCTATCAAGGCCCGTCAGATCTACG
droBia1 scf7180000302188:81892-82103 + TA--------------------------------------------------------------------------------------------AAAAATGTCTGGGATTTCTGGAATATTTTGGAGTACTTACAA------CAATCTGGACGACCCTTATCTGCGGTCAGCTGTT-GTTATTTTT-TGAAC-----ACCATGCCCAG--ATTGACA--CTTGATAACCCAAACACTAATTCGCTTTCCTC-GTGGACTTT-------GA-TTT----TTGCAGTGCC---AGCGACGAGATGACCATTAAAGCTATCAAGGCCCGTCAGATCTACG
droTak1 scf7180000415779:141532-141764 - TGG---CAAT-TT-----------------------------------------------------------CCTAATTAGTTA-AT-------AAATATGTCTGGGATTTCGGGAATATTCTGGAGTACATCTGCCA---TTAATTTTGAAGGCCCTTATCAGCGGTCAGATGTT-GTTATTTCG-CTAAC-----ACCACGCTTAG--ATTAGAACCATTGATATTCGTAATACTAATT-----TCTTT-GTGGACTTT-------GG-CTT----TTGCAGTGCC---AGCGACGAGATGACCATCAAAGCAATCAAGGCCCGTCAGATCTACG
droEle1 scf7180000491273:1642553-1642785 + TTA-------------------------------------------------------------------------AGTGGTTA-TT-AAGATCAAAAATGGCTGGAATTTCGGGAATATTCTGGAGTACAACCAGTG---CCAATTTTGAATGCCCTTATCTGCGGTTAGCTGTTTGTGT------TTTTCTTGAAACCATGCCTAG--ATTAAAACAATAGATAATC--GTTGCTAATTTACTTTATTT-GTGAACTTT-------GG-TTT----TTGCAGTGCC---AGCAACGAGATGACCATCAAAGCGATCAAGGCCCGTCAGATCTTCG
droRho1 scf7180000777056:15550-15787 + AATAAA----------------------------------------------------------------CTATTAAGTAGTCA-TT-AAATACAAAAATGGCAGGGATTTCGGGAATATTCTGGAGTTCATCCAGTG---CCAATTTTGAAAGCCCTTATCTGCGGTTAGCTGTTTGTT------TTTAAA-----TCCATGCCTAG--ATTAAAACAATAAGTAATC--GACACTAATTAGCTTTCCTT-GTGGACTTT-------GG-TTTT---TGTCAGTGCC---AGCAACGAAATGACCATCAAAGCGATCAAGGCCCGTCAGATCTACG
droFic1 scf7180000453949:432727-433017 + AAGATA--GCTTTTGTTTATTGGCTATATTATTCTTGTTAAAAAAGAGCTTAAGTGACGTTTAGAAGAGTTTAAA-------------AACCGAAACAATGTCAGGACTTTCGGGAATATTCTGGTCTGCGCCTAGGG---TTGATCTTGAAACGTCTTATCTGCGGTTAGCTGAG-GTTT------CGCACATGACACCAAGCCTAG--ATTAAAACCATTGATGTTC--AACGCTAATTTGCCTTCTTG-TTGGACTTT-------GA--TT----TTGCAGTGCC---AGCGACGAGATGACCATCAAAGCTATCAAGGCCCGTCAGATCTACG
droKik1 scf7180000302382:533324-533555 - AATAGACAA------------------------------------------------------------------------TAA-TT-CAATTAAGAAATGACTGGGATTTCGGGAATATTCTGGCATTCATTTAGCAGCAACCATATTGACACTCCTTATCTGCGGTCAGCTTCT-GTT------TTTTAC-----ACCATACTCAGCGATTA-AACAATTTAAATTT--AACACTAATTCGCCTTTCG--TTGGACTTT-------GGTTTT----TTGCAGTGAC---AGCAACAATATGACCATCAAAGCTATCAAGGCCCGTCAGATCTACG
droAna3 scaffold_12916:15860643-15860702 + T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT----TTGCAGTGAC---AGCAGCAATATGACCATCAAGTCGATCAAGGCCCGTCAAATCTACG
droBip1 scf7180000396717:99015-99074 + T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT----TTGCAGTGAC---AGCAGCAATATGACCATCAAGTCGATCAAGGCCCGTCAAATCTACG
dp5 4_group3:8447638-8447691 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATTTGC---AGCTCCAACATGACCATCAAGGCAATCAAGGCCCGTCAAATCTACG
droPer2 scaffold_1:9898852-9898888 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGACCATCAAGGCAATCAAGGCCCGTCAAATCTACG
droWil2 scf2_1100000004874:23532-23594 + C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-------TT-TTT----TTTCAGTTCA---GAAGACAATATGACCATCAAAGCGATCAAAGCCCGTCAAATCTACG
droVir3 scaffold_12963:12859479-12859569 + CATATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGACCGTACTT-TTGTGCTTT-------T--TGC----TTGCAGTTCTAAAGAAAGCAACATGACCATCAAGTCGATCAAAGCACGTCAGATCTACG
droMoj3 scaffold_6500:7205894-7205979 - AT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAACGCAC---CTTTTTTTAAATCT-------G---TT----TTGCAGTTCTAAAAAAAGCAACATGACCATCAAGTCGATCAAAGCACGTCAAATCTACG
droGri2 scaffold_14978:835146-835212 - TGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-------GG--------TTGCAGTTCCAACGGTATCAACATGACCATCAAGTCGATCAAAGCACGTCAGATCTACG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TGGAA-CAAT-TCCATCTGTA---------------------------------------------GATTTGAATAAGC-T-TAAGTGTATTTAAGTAATGGCAGGGATTTCGGGAATATTCTGGAGCAATTCCTCCT---ATAATTCTAAATGGCTTCATCTGTGGTCAGCTATTTGA-------TAGAAC-----ACAATGCCTAG--ATCGAAAGCCCTGATAGCA--TACACTAACTCGC---CCTT-TTGGACTTT-------GT-TTT----TGGCAGTGAC---AGCAACGAGATGACCATCAAAGCGATCAAGGCCCGTCAGATCTACGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................................................................................................................................................................................................GACCATCAAAGCGATCAAGGCC.............2214.00400200000002000000
..........................................................................................................................................................................................................................................................T-TTGGACTTT-------GT-TTT----TGGCAGT....................................................2214.00422000000000000000
.................................................................................................................................................................................................................................................................................................................CATCAAAGCGATCAAGGCC.............1913.00310100100000000000
..........................................................................................................................................................................................................................................................T-TTGGACTTT-------GT-TTT----TGGCAGC....................................................2213.00330000000000000000
...................................................................................................TGGCAGGGATTTCGGGAATG..........................................................................................................................................................................................................................2013.00300000000000003000
.........................................................................................................................................................................................................................................................................................................GAGATGACCATCAAAGCGATCAAGGAA.............2712.00200000000000020000
.................................................................................................................................................................................................................................................................................................................CATCAAAGCGATCAAGGCCCGTC.........2312.00200200000000000000
.............................................................................................................................................................................................................................................................................................................TGACCATCAAAGCGATCAAGGCCCGT..........2612.00200010000000010000
..................................................................................................................................................................................................................................................................................................................ATCAAAGCGATCAAGGCCCGTCAGA......2512.00200000011000000000
......................................................................................................................................................................................................................................................................................................................AAGCGATCAAGGCCCGTCAGATCTAC.2612.00201100000000000000
............................................................................................................................................................................................................................................................................................................................TCAAGGCCCGTCAGATCTAC.2012.00220000000000000000
......................................................................................................................................................................................................................................................................................................................AAGCGATCAAGGCCCGTCAGATCT...2412.00211000000000000000
..................................................................................................................................................................................................................................................................................................................ATCAAAGCGATCAAGGCC.............1812.00211000000000000000
...............................................................................................................................................................................................................................................................................................................ACCATCAAAGCGATCAAGGCC.............2112.00220000000000000000
..................................................................................................................................................................................................................................................................................................................ATCAAAGCGATCAAGGCCCGTCAGATC....2712.00220000000000000000
..............................................................................................................................................................................................................................................................................................................GACCATCAAAGCGATCAAGGC..............2111.00100100000000000000
...........................................................................................................................................................................................................................................................................................GTGAC---AGCAACGAGATGACCAT.............................2211.00100000000000001000
.....................................................................................................................................................................................................................................................................................................................AAAGCGATCAAGGCCCGT..........1811.00101000000000000000
...........................................................................................................................................................................................................CCTAG--ATCGAAAGCCCTGATAGCA--TA........................................................................................................2611.00101000000000000000
........................................................................................................................................................................................................................................................................................................CGAGATGACCATCAAAGCGATCAAGGC..............2711.00101000000000000000
..............................................................................................................................................................................................................................................................................................................GACCATCAAAGCGATCAAGGCCCGTC.........2611.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................GATCAAGGCCCGTCAGATCTAC.2211.00100100000000000000
................................................................................................................................................................................................................................................................................................................CCATCAAAGCGATCAAGGC..............1911.00110000000000000000
.....................................................................................................................................................................................................................................................................................................CAACGAGATGACCATCAAAGCGATC...................2511.00100010000000000000
.................................................................................................................................................................................................................................AGCA--TACACTAACTCGC---C.........................................................................................1811.00100001000000000000
....................................................................................................................................................................................................................................................................................................................CAAAGCGATCAAGGCCCGTCAGATC....2511.00100000001000000000
............................................................................................................................................................................................................................................................................................................ATGACCATCAAAGCGATCAAGGCC.............2411.00101000000000000000
..........................................................................................................................................................................................................................................................T-TTGGACTTT-------GT-TTT----TGGCA......................................................2011.00101000000000000000
........................................................................................................GGGATTTCGGGAATATTCTGGAGC.................................................................................................................................................................................................................2411.00101000000000000000
..................................................................................................................................................................................................................................................................................................................ATCAAAGCGATCAAGGCCCGTCAGC......2511.00100000000100000000
............................................................................................................................................................................................................................................................TTGGACTTT-------GT-TTT----TGGCAG.....................................................2011.00100000010000000000
...................................................................................................................................................................................................................................................................................................................TCAAAGCGATCAAGGCCCGTCAGA......2411.00100000001000000000
.......................................................................................................................................................................................................................................................................................................................AGCGATCAAGGCCCGTCAGATCT...2311.00101000000000000000
.....................................................................................................................................................................................................................GAAAGCCCTGATAGCA--TA........................................................................................................1811.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................GATCAAGGCCCGTCAGAT.....1811.00101000000000000000
..........................................................................................................................................................................................................GCCTAG--ATCGAAAGCCCTGATAG..............................................................................................................2311.00100000000000100000
............................................................................................................................................................................................................................................................................................TGAC---AGCAACGAGATGACCATCAAAGCGA.....................2911.00100000001000000000
........................................................................................................................................................................................................................................................CTT-TTGGACTTT-------GT-TTT----TGGCAG.....................................................2311.00110000000000000000
.................................................................................................................................................................................................................................................................................................................CATCAAAGCGATCAAGGCCCGTCA........2411.00100010000000000000
.................................................................................................................................................................................................................................................CGC---CCTT-TTGGACTTT-------GT-TTT----TGGCAG.....................................................2711.00100000000000010000
.....................................................................................................................................................................................................................................................................................................................AAAGCGATCAAGGCCCGTCAGATCC...2511.00101000000000000000
..................................................................................................................................................................................A-------TAGAAC-----ACAATGCCTAG--ATCGAAAGCC.....................................................................................................................2811.00101000000000000000
..............................................................................................................................................................................................................................................................................................................GACCATCAAAGCGATCAAG................1911.00100010000000000000
.........................................................................................................................................................................................................................................................TT-TTGGACTTT-------GT-TTT----TGGCA......................................................2111.00100000010000000000
..................................................................................................................................................................................................................................................................................................................ATCAAAGCGATCAAGGCCCGTCAGATCT...2811.00100010000000000000
....A-CAAT-TCCATCTGTA---------------------------------------------GATTTGAA.......................................................................................................................................................................................................................................................................2311.00110000000000000000
..............................................................................................................................................................................................................................................................................................................GACCATCAAAGCGATCAAGGCCCGG..........2511.00100100000000000000
....................................................................................................................................................................................................................................................................................................................CAAAGCGATCAAGGCCCGT..........1911.00100100000000000000
..................................................................................................................................................................................................................................................................................................................ATCAAAGCGATCAAGGCCCGTCA........2311.00100010000000000000
........................................................................................................................................................................................................ATGCCTAG--ATCGAAAGCCCTGATAG..............................................................................................................2511.00100000000000100000
........................................................................................................................................................................................................ATGCCTAG--ATCGAAAGCC.....................................................................................................................1811.00110000000000000000
.........................................................................................................................................................................................................TGCCTAG--ATCGAAAGCCCTG..................................................................................................................2011.00100000010000000000
.............................................................................................................................................................................................................................................................................................................TGACCATCAAAGCGATCAAGGCCCGTCAGA......3011.00100000001000000000
.......................................................................................................................................................................................................................................................CCTT-TTGGACTTT-------GT-TTT----TGGCA......................................................2311.00100000000100000000
.........T-TCCATCTGTA---------------------------------------------GATTTGAAT......................................................................................................................................................................................................................................................................2011.00101000000000000000
.............................................................................................................................................................................ATTTGA-------TAGAAC-----ACAATGCCT...................................................................................................................................2111.00110000000000000000
...........................................................................................................................................................................................................................................................................................................GATGACCATCAAAGCGATCAA.................2111.00100010000000000000
.......................................................................................................................................................................................................................................................................................................ACGAGATGACCATCAAAGCGATCAA.................2511.00100001000000000000
........AT-TCCATCTGTA---------------------------------------------GATTTGAATAAGC-T-T..............................................................................................................................................................................................................................................................2711.00110000000000000000
..............................................................................................................................................................................................................................................................................................................GACCATCAAAGCGATCAAGGCCCGTGG........2711.00110000000000000000
............................................................................................................................................................................................GAAC-----ACAATGCCTAG--ATCGAAAGCC.....................................................................................................................2511.00100100000000000000
...........................................................................................................................................................................................AGAAC-----ACAATGCCTAG--ATCGAAAGC......................................................................................................................2511.00100100000000000000
.............................................................................................................................................................................................................................................................................................................TGACCATCAAAGCGATCAAGGCC.............2311.00101000000000000000
..................................................................................................................................................................................................................................................................................................................ATCAAAGCGATCAAGG...............1611.00100000000001000000
..............................................................................................................................................................................................AC-----ACAATGCCTAG--ATCGAAAGCC.....................................................................................................................2311.00110000000000000000
......................................................................................................................................................................................................................................................................................................................AAGCGATCAAGGCCCGTCAGATCC...2411.00110000000000000000
...........................................................................................................................................................................................................................................................................................GTGAC---AGCAACGAGATGAC................................1911.00101000000000000000
..................................................................................................................................................................................................................................................................................................................ATCAAAGCGATCAAGGCCCGTCAG.......2411.00100000000100000000
.....................................................................................................................................................................................................................................................................................................................AAAGCGATCAAGGCA.............15120.08100000001000000000
droSec2
TAGATT----------------------------------------------------------------TGAATGAGTGT-TAAGTGTATTTAAATAATGGCAGGGATTTCGGGAATATTCTGGAGCAATTCCTCCT---ATAATTCTAAATGGCTTCATCTGTGGTCAGCTATTTGA-------TAGAAC-----ACCATGCCTAG--ATTGAAAGCCCTGATAGCA--GACACTAACTCGC---CCTT-TTGGACTTT-------GT-TTT----TGGCAGTGAC---AGCAACGAGATGACCATCAAAGCGATCAAGGCCCGTCAGATCTACGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................................................................................................................................................................................................................CAAAGCGATCAAGGCCCGTCA........2113.0031110
......................................................................................................................................................................................................................................................................................................AACGAGATGACCATCAAAGCGATC...................2412.0020200
........................................................................................................................................................................................................................................................................................................................GCGATCAAGGCCCGTCAGA......1911.0011000
..........................................................................................................................................................................................................................................................................................................AGATGACCATCAAAGCGATCAA.................2211.0010010
....................................................................................................................................................................................................................................................................................................................CAAAGCGATCAAGGCCCGTCAGATCT...2611.0010010
.............................................................................................................................................................................................................................................................................................GAC---AGCAACGAGATGACCATCAAAGC.......................2611.0010010
..............................................................................................................................................................................................................................................................................................................GACCATCAAAGCGATCAAGGCCCGT..........2511.0010100
.....................................................................................................................................................................................................................................................................................................CAACGAGATGACCATCAAAGC.......................2111.0011000
.........................................................................................................................................................................................................................................................................................................GAGATGACCATCAAAGCGATC...................2111.0010100
...................................................................................................................................................................................................................................................................................................................TCAAAGCGATCAAGGCCCGTCAGA......2411.0010010
..............................................................................................................................................................................................................................................................................................................................AAGGCCCGTCAGATCTACG1911.0011000
..............................................................................................................................................................................................................................................................................................................GACCATCAAAGCGATCAAGGCCC............2311.0010010
......................................................................................................................................................................................................................................................................................................................AAGCGATCAAGGCCCGTCAGATCT...2411.0010100
...........................................................................................................................................................................................................................................................................................................GATGACCATCAAAGCGATCAAGGCCCGT..........2811.0010100
.............................................................................................................................................................................................................................................................................................GAC---AGCAACGAGATGACCATCA...........................2211.0010001
..............................................................................................................................................................................................................................................................................................................GACCATCAAAGCGATCAAGGCCCGTCA........2711.0010100
.............................................................................................................................................................................................................................................................................................GAC---AGCAACGAGATGACCATC............................2111.0010010
....................................................................................................................................................................................................................................................................................................GCAACGAGATGACCATCA...........................1811.0010010
..................................................................................................................................................................................................................................................................................................................ATCAAAGCGATCAAGGCCCGT..........2111.0010010
..................................................................................................................................................................................................................................................................................................................ATCAAAGCGATCAAGGCCCGTCA........2311.0010100
....TT----------------------------------------------------------------TGAATGAGTGT-TAAGTG.........................................................................................................................................................................................................................................................1911.0010100
.........................................................................................................................................................................................................................................................................................................GAGATGACCATCAAAGCGAT....................2011.0010100
dm3
TAAATA----------------------------------------------------------------TAAATAAGC-C-CAA--CTATTTAAGTAATGGCGGGGATTTCGCAAATATTGTGGAGCACATCCGCCA---TAAAATCTGAATGGCTTCATCTGCGGTCAGCTATTTAA-------TAGAAC-----ACCATGCCTAG--ATTTAAAGTCCTGATAACA--GACACTAATTCGC---CCTC-GTGGACTTTGTTTTTTGT-TTTTTGATTTCAGTGAC---AGCAACGAGATGACCATCAAAGCGATCAAGGCCCGTCAAATCTACGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................................................................................................AACGAGATGACCATCAAAGCGATC...................24142.0042000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000009141402000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....................................................................................................................................................................................................................................................................................................................CAAAGCGATCAAGGCCCGTCA........21117.001700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000010000000
.....................................................................................................................................................................................................................................................................................................................AAAGCGATCAAGGCCCGTC.........19115.00150000000000000000000000010000000000000001000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000400000000000000000000000000000000000000000010000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..................................................................................................................................................................................................................................................................................................................ATCAAAGCGATCAAGGCCCGTC.........22114.001400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100101200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................AAGCGATCAAGGCCCGTCA........19113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000010000100000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000010000000001200000000000000000000010000000
...................................................................................................................................................................................................................................................................................................AGCAACGAGATGACCATCAAAGCGATC...................27113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006502000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................AAAGCGATCAAGGCCCGTCAAATCT...25111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006101000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................AGCAACGAGATGACCATCA...........................19111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002500000000000000100200000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................GATGACCATCAAAGCGATCAA.................21110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................AGCAACGAGATGACCATCAAAGCGAT....................26110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TCAAAGCGATCAAGGCCCGTCAAATC....26110.00100000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000004000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................AGCGATCAAGGCCCGTCA........18110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010200000100000000000000000000000000000000000000000000000000000000000000000000020100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000100000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................GAGATGACCATCAAAGCGATC...................21110.00100000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000044000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GACCATCAAAGCGATCAAGGCCCGTCA........2718.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100006000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................GCGATCAAGGCCCGTCAA.......1818.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000200000400000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................AAGCGATCAAGGCCCGTC.........1818.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................GATGACCATCAAAGCGATCA..................2017.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................AAAGCGATCAAGGCCCGTCA........2017.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000200000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AACGAGATGACCATCAAAGCGATCAAGG...............2817.0070000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................AAAGCGATCAAGGCCCGTCAAATCTAC.2717.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000001030000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GATCAAGGCCCGTCAAATC....1916.0060000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................AAAGCGATCAAGGCCCGTCAAATC....2416.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000001000002001000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................GATGACCATCAAAGCGATC...................1916.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000300200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................ACGAGATGACCATCAAAGCGATCA..................2416.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000100000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................AGATGACCATCAAAGCGATCA..................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000010000
.......................................................................................................................................................................................................................................................................................................................AGCGATCAAGGCCCGTCAAATCTAC.2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TCAAAGCGATCAAGGCCCGTCA........2215.0050000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000300000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TCAAAGCGATCAAGGCCC............1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000300000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................AAAGCGATCAAGGCCCGTCAAAT.....2315.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................GATGACCATCAAAGCGATCAAGGCCCG...........2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................................CGAGATGACCATCAAAGCGATC...................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................GCAACGAGATGACCATCAAAGC.......................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................GAC---AGCAACGAGATGACC...............................1814.0040000000000000000000000000000000000000001000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................GAC---AGCAACGAGATGACCA..............................1914.0040000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000200000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................GCAACGAGATGACCATCAA..........................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GACCATCAAAGCGATCAAGGCCC............2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GATCAAGGCCCGTCAAAT.....1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................GTGAC---AGCAACGAGATGACCA..............................2114.0040000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...........................................................................................................................................................................................................................................................................................................GATGACCATCAAAGCGAT....................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................AGATGACCATCAAAGCGATCAA.................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................GCAACGAGATGACCATCAAA.........................2014.0040000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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............................................................................................................................................................................................................................................................................................TGAC---AGCAACGAGATGACCATCAAAGC.......................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................ATCAAAGCGATCAAGGCCCG...........2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................GAGATGACCATCAAAGCGATCAAGGCCCG...........2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.......................................................................................................................................................................................................................................................................................................ACGAGATGACCATCAAAGCGATCAAGGCC.............2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...............................................................................................................................................................................................................................................................................................C---AGCAACGAGATGACCATCAAAGC.......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................ACCATGCCTAG--ATTTAAAGTCCTGA.................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................ACACTAATTCGC---CCTC-GTGGA................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................TGACCATCAAAGCGATCAAGGCCCGTCA........2811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................TC-GTGGACTTTGTTTTTTGT-..................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................GCAACGAGATGACCATCA...........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...........................................................................................................................................................................................................................................CTAATTCGC---CCTC-GTGGAC...............................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................GCAAATATTGTGGAGCACATCCG..........................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................AAAGCGATCAAGGCCCGTCAAA......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................AGCGATCAAGGCCCGTCAG.......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................GAGATGACCATCAAAGCGATCA..................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................AAATATTGTGGAGCACATCCGCC........................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................ACCATCAAAGCGATCAAGGCCCGTCAAAA.....2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................GATGACCATCAAAGCGATCAAGGCC.............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................TGACCATCAAAGCGATCA..................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................CAAAGCGATCAAGGCCCG...........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
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.........................................................................................................................................................................................................................................................................................................GAGATGACCATCAAAGCGATCAA.................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................AAAGCGATCAAGGCCCGTCG........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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....................................................................................................................................................................................................................................................................................................................CAAAGCGATCAAGGCCCGTC.........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
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...................................................................................................................................................................................................................................................................................................AGCAACGAGATGACCATCG...........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AACGAGATGACCATCAAAGC.......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................CAAAGCGATCAAGGCCCGTCAAATC....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...................................................................................................................AATATTGTGGAGCACATCC...........................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
................................................................................................................GCAAATATTGTGGAGCACATC............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................CCATCAAAGCGATCAAGGCCC............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................AATATTGTGGAGCACATCCG..........................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................AAAGCGATCAAGGCCCGTCAG.......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................CTAATTCGC---CCTC-GTGGACTT.............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GACCATCAAAGCGATCAAGG...............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................CAAAGCGATCAAGGCCCGT..........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...............................................................................................................................................................................................................................................................................................C---AGCAACGAGATGACCATCAAAAA.......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
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................................................................................................................................................................................................................................................................................................................CCATCAAAGCGATCAAGGCC.............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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............................................................................................................................................................................................................................................................................................TGAC---AGCAACGAGATGAA................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................AC---AGCAACGAGATGACCAT.............................1911.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................TTCAGTGAC---AGCAACGAG.....................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................TC-GTGGACTTTGTTTTTTGT-TT................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................TGACCATCAAAGCGATCAAGGCCCGTC.........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
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.......................................................................................................................................................................................................................................................................TTTTTGT-TTTTTGATTTCAG.....................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................CCATCAAAGCGATCAAGGCTT............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................TGACCATCAAAGCGATCAAGGCC.............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TGAC---AGCAACGAGATGACCATC............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................GC---CCTC-GTGGACTTTGTTTTTTG....................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................GAC---AGCAACGAGATGACCATCAAAGC.......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................AAGCGATCAAGGCCCGTCAAATC....2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................GTGAC---AGCAACGAGATGACCAT.............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................C---CCTC-GTGGACTTTGTTTTTTTG-..................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................ACGAGATGACCATCAAAGCGAT....................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TGAC---AGCAACGAGATGACC...............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AACGAGATGACCATCAAAGCGATCAAG................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
droEre2
AAGC---AGC----------------------------------------------------------------------T-CCA--GTTTTCAAGCAATGGCGGGAATTTCGGGAATATTCTGGAGCACATCCACCA---CTCAAACTGAAAGGCCTCGTCTGCGGTCAGCCATTTGA-------TAGAAC-----ACCATGCCTAG--ATTGAAACCCCTGATAGCA-AAACACTAATTCGCCGTCCTC-GTGGACTTT-------GG-TTT----TTGCAGTGAC---AGCAACGAGATGACCATCAAAGCAATCAAGGCCCGTCAGATCTACGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................................................................................................................................................................GAC---AGCAACGAGATGACCATCA...........................2212.0020000200
..................................................................................................................................................................................................................................................................................................................ATCAAAGCAATCAAGGCCCGT..........2112.0020000200
..................................................................................................................................................................................................................................................................................................................ATCAAAGCAATCAAGGCCCGTCAGA......2512.0020000200
.............................................................................................................................................................................................................................................................................................GAC---AGCAACGAGATGACC...............................1812.0020000020
.......................................................................................................................................................................................................................................................................................................................AGCAATCAAGGCCCGTCAGAT.....2111.0010000100
......................................................................................................................................................................................................................................................................................................................AAGCAATCAAGGCCCGTCAGATCT...2411.0011000000
..................................................................................................................................................................................................................................................................................................................ATCAAAGCAATCAAGGCCCGTCA........2311.0010000100
.........................................................................................................................................................................................................................................................................................................................CAATCAAGGCCCGTCAGATC....2011.0010100000
.................................................................................................................................................................................................................................................................................................................CATCAAAGCAATCAAGGCCCGTCAGAT.....2711.0010000100
..........................................................................................................................................................GCCTCGTCTGCGGTCAGCCA...................................................................................................................................................................2011.0011000000
.................................................................................................................................................................................................................................................................................................................CATCAAAGCAATCAAGGCCCGTCAG.......2511.0011000000
.........................................................................................................................................................................................................................................................................................................GAGATGACCATCAAAGCAAT....................2011.0010100000
....................................................................................................................................................................................................................................................................................................................CAAAGCAATCAAGGCCCGTCA........2111.0010000100
........................................................................................................................................................................................................................................................................................................CGAGATGACCATCAAAGCAATCAAG................2511.0010000010
....................................................................................A--GTTTTCAAGCAATGGCGG........................................................................................................................................................................................................................................1911.0010000100
.........................................................................................................................................................................................................................................................TC-GTGGACTTT-------GG-TTT----TTGCAG.....................................................2211.0011000000
...............................................................................................................................................................................................................................................................................................................................AGGCCCGTCAGATCTACG1811.0011000000
...............................................................................................................................................................................................C-----ACCATGCCTAG--ATTGAAACCCCTG..................................................................................................................2511.0011000000
.....................................................................................................................................................................................................................................................................................................CAACGAGATGACCATCAAAGCAATC...................2511.0010001000
...........................................................................................................................................................................................................................................................................................GTGAC---AGCAACGAGATGACCAT.............................2211.0010000100
............................................................................................................................................................................................................................................................GTGGACTTT-------GG-TTT----TTGCAG.....................................................2011.0010000100
............................................................................................................................................................................................................................................................................................TGAC---AGCAACGAGATGACCATCAAAGC.......................2711.0010000010
..........................................................................................................................................................................................................................................................................................................................AATCAAGGCCCGTCAGATCTA..2111.0011000000
.................................................................................................................................................................................................................................................................................................................CATCAAAGCAATCAAGGCCCGT..........2211.0010100000
......................................................................................................................................................................................................................................................................................................................AAGCAATCAAGGCCCGTCAGTA.....2211.0011000000
............................................................................................................................................................................................................................................................................................TGAC---AGCAACGAGATGAC................................1811.0010000010
......................................................................................................................................................................................................................................................TCCTC-GTGGACTTT-------GG-TTT----TTGC.......................................................2311.0010000010
..........................................................................................................................................................................................................................................................................................................................AATCAAGGCCCGTCAGATCT...2011.0011000000
.....................................................................................................................................................................................................................................................................................................................AAAGCAATCAAGGCCCGTCA........2011.0011000000
.........................................................................................................................................................................................................................................................................................................................CAATCAAGGCCCGTCAGAT.....1911.0010000100
...............................................................................................................................................................................................................................................................................................C---AGCAACGAGATGACCATCAAAGC.......................2411.0010000010
................................................................................................................................................................................................................................................................................................................CCATCAAAGCAATCAAGGC..............1911.0010000010
..............................................................................................................................................................................................................................................................................................................GACCATCAAAGCAATCAAGGCCCGT..........2511.0010000010
.............................................................................................................................................................................................................................................................................................GAC---AGCAACGAGATGACCATCAAAGC.......................2611.0010000010
..........................................................................................................................................................................................................................................................................................................................AATCAAGGCCCGTCAGATCTAC.2211.0011000000
......................................................................................................................................................................................................................................................................................................AACGAGATGACCATCAAAGC.......................2011.0010001000
droYak3
GG----CCA------TC-GTT---------------------------------------------GAATTGAAAAACC-T-CAG--GTTTTCAAGCAATGACGGGGATTTCGGGAATATTCTGGAGCACATCCACCA---TTGCCACCGAAAGGCCTCGTCTGCGGTCAGCCATTTGA-------TAGAAC-----ACCATGCCCAG--ATTGAAACCCCTGATAGCA--ATCACTAATTCGACGTTCTC-ATGGACTTTGGTTTTTGG-TTT----TTGCAGTGAC---AGCAACGAGATGACCATCAAAGCGATCAAGGCCCGTCAGATCTACGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................................................................................................................................................................................................CATCAAAGCGATCAAGGCCCGTCA........2414.00401000030000
......................................................................................................................................................................................................................................................................................................................AAGCGATCAAGGCCCGTCAGATCT...2414.00402000110000
......................................................................................................................................................................................................................................................................................................................AAGCGATCAAGGCCCGTCA........1913.00300000120000
.................................................................................................................................................................................................................................................................................................................CATCAAAGCGATCAAGGCCCGTCAG.......2512.00200000020000
.............................................................................................................................................................................................................................................................................................GAC---AGCAACGAGATGACCATC............................2112.00200010010000
...............................................................................................................................................................................................................................................................................................................ACCATCAAAGCGATCAAGGCCCGTCA........2612.00200000020000
.......................................................................................................................................................................................................................................................................................................ACGAGATGACCATCAAAGCGATC...................2312.00200000020000
..................................................................................................................................................................................................................................................................................................................ATCAAAGCGATCAAGGCCCGTCA........2311.00101000000000
..................................................................................................................................................................................................................................................................................................................ATCAAAGCGATCAAGGCCCGTCAGATCTA..2911.00100000010000
..............................................................................................................................................................................................................................................................................................................GACCATCAAAGCGATCAAGGCC.............2211.00110000000000
.........................................................................................................................................................................................................................................................................................................................CGATCAAGGCCCGTCAGATCTACG2411.00100000100000
..............................................................................................................................................................................................................................................................................................................................AAGGCCCGTCAGATCTACG1911.00100000010000
.................................................................................................................................................................................................................................................................................................................CATCAAAGCGATCAAGGCCCGT..........2211.00110000000000
..................................................................................................................................................................................................................................................................................................................ATCAAAGCGATCAAGGCCCGTCAC.......2411.00101000000000
.....................................................................................................................................................................................................................................................................................................................AAAGCGATCAAGGCCCGTCA........2011.00100000010000
................................................................................................................................................................................................................................................................................................................CCATCAAAGCGATCAAGGCCCGTCAGAT.....2811.00101000000000
...................................................................................................................................................................................................................................................................TTGGTTTTTGG-TTT----TTGCAG.....................................................2011.00100100000000
............................................................................................................................................................................................................................................................................................................ATGACCATCAAAGCGATCAAG................2111.00100000010000
.............................................................................................................................................................................................................................................................................................................TGACCATCAAAGCGATCAAGGCCCG...........2511.00101000000000
.............................................................................................................................................................................................................................................................................................................................CAAGGCCCGTCAGATCTA..1811.00100000100000
................................................................................................................................................................................................................................................................................................................CCATCAAAGCGATCAAGGCCCGTCA........2511.00100000010000
......................................................................................................................................................................................................................................................................................................AACGAGATGACCATCAAAGCGATCAAG................2711.00100000010000
.............................................................................................................................................................................................................................................................................................................TGACCATCAAAGCGATCAAGGC..............2211.00100000010000
.............................................................................................................................................................................................................................................................................................................TGACCATCAAAGCGATCAAGGCCC............2411.00100100000000
....................................................................................................................................................................................................................................................................................................GCAACGAGATGACCATCAAAGCGATCAAG................2911.00100000010000
...............................................................................................................................................GCCACCGAAAGGCCTCGTCTGCGG..........................................................................................................................................................................2411.00100100000000
..........................................................................................TTCAAGCAATGACGGGGAT....................................................................................................................................................................................................................................1911.00101000000000
......................................................................................................................................................................................................................................................................................................................AAGCGATCAAGGCCCGTC.........1811.00100000100000
...............................................................................................................................................................................................................................................................................................................ACCATCAAAGCGATCAAGGCCCGTCAG.......2711.00101000000000
..................................................................................................................................................ACCGAAAGGCCTCGTCTGCGG..........................................................................................................................................................................2111.00100100000000
..............................................................................................................................................................................................................................................................................................AC---AGCAACGAGATGACCATCAAAGC.......................2511.00100100000000
....................................................................................................................................................................................................................................................................................................GCAACGAGATGACCATCAAA.........................2011.00100000010000
...................................................................................................................................................................................................................................................................................................................TCAAAGCGATCAAGGCCC............1811.00100001000000
.........................................................................................................................................................................................................................................................................................................GAGATGACCATCAAAGCGATC...................2111.00100100000000
.................................................................................................................................................................................................................................................................................................................CATCAAAGCGATCAAGGCC.............1911.00100000010000
.........................................................................................................................................................................................................................................................................................................GAGATGACCATCAAAGCGATCAAGGCCC............2811.00100000010000
.......................................................................................................................................................................................................................................................................................................ACGAGATGACCATCAAAGCGATCAAG................2611.00100000010000
......................................................................................................................................................................................................................................................................................................AACGAGATGACCATCAAAGCGATCAAGGCC.............3011.00100000010000
......................................................................................................................................................................................................................................................................................................................AAGCGATCAAGGCCCGTCAGA......2111.00100000010000
.................................................................................................................................................................................................................................................................................................................CATCAAAGCGATCAAGGCGTC...........2130.33100000010000
droEug1
A-------------------------------------------------------------------------------------------------ATGTCTGGGTTTTCGGGAATATTCTGGTGCCCATCAAACA---TGAATTTTAATGGAGATTATCTGCGGTCAGCTGTT-GTTATT--------TTAGACACCATGCTTAG--ATTAAAATTGTTGATAGTA-AAAGACTAATTTGTGTTTTTT-GTGGACTTT-------GA-TTT----TTGCAGTGAC---AGCAACGAGATGACCATCAAAGCTATCAAGGCCCGTCAGATCTACGSizeHit CountTotal NormTotal
No Reads
droBia1
TA--------------------------------------------------------------------------------------------AAAAATGTCTGGGATTTCTGGAATATTTTGGAGTACTTACAA------CAATCTGGACGACCCTTATCTGCGGTCAGCTGTT-GTTATTTTT-TGAAC-----ACCATGCCCAG--ATTGACA--CTTGATAACCCAAACACTAATTCGCTTTCCTC-GTGGACTTT-------GA-TTT----TTGCAGTGCC---AGCGACGAGATGACCATTAAAGCTATCAAGGCCCGTCAGATCTACGSizeHit CountTotal NormTotal
No Reads
droTak1
TGG---CAAT-TT-----------------------------------------------------------CCTAATTAGTTA-AT-------AAATATGTCTGGGATTTCGGGAATATTCTGGAGTACATCTGCCA---TTAATTTTGAAGGCCCTTATCAGCGGTCAGATGTT-GTTATTTCG-CTAAC-----ACCACGCTTAG--ATTAGAACCATTGATATTCGTAATACTAATT-----TCTTT-GTGGACTTT-------GG-CTT----TTGCAGTGCC---AGCGACGAGATGACCATCAAAGCAATCAAGGCCCGTCAGATCTACGSizeHit CountTotal NormTotal
No Reads
droEle1
TTA-------------------------------------------------------------------------AGTGGTTA-TT-AAGATCAAAAATGGCTGGAATTTCGGGAATATTCTGGAGTACAACCAGTG---CCAATTTTGAATGCCCTTATCTGCGGTTAGCTGTTTGTGT------TTTTCTTGAAACCATGCCTAG--ATTAAAACAATAGATAATC--GTTGCTAATTTACTTTATTT-GTGAACTTT-------GG-TTT----TTGCAGTGCC---AGCAACGAGATGACCATCAAAGCGATCAAGGCCCGTCAGATCTTCGSizeHit CountTotal NormTotal
No Reads
droRho1
AATAAA----------------------------------------------------------------CTATTAAGTAGTCA-TT-AAATACAAAAATGGCAGGGATTTCGGGAATATTCTGGAGTTCATCCAGTG---CCAATTTTGAAAGCCCTTATCTGCGGTTAGCTGTTTGTT------TTTAAA-----TCCATGCCTAG--ATTAAAACAATAAGTAATC--GACACTAATTAGCTTTCCTT-GTGGACTTT-------GG-TTTT---TGTCAGTGCC---AGCAACGAAATGACCATCAAAGCGATCAAGGCCCGTCAGATCTACGSizeHit CountTotal NormTotal
No Reads
droFic1
AAGATA--GCTTTTGTTTATTGGCTATATTATTCTTGTTAAAAAAGAGCTTAAGTGACGTTTAGAAGAGTTTAAA-------------AACCGAAACAATGTCAGGACTTTCGGGAATATTCTGGTCTGCGCCTAGGG---TTGATCTTGAAACGTCTTATCTGCGGTTAGCTGAG-GTTT------CGCACATGACACCAAGCCTAG--ATTAAAACCATTGATGTTC--AACGCTAATTTGCCTTCTTG-TTGGACTTT-------GA--TT----TTGCAGTGCC---AGCGACGAGATGACCATCAAAGCTATCAAGGCCCGTCAGATCTACGSizeHit CountTotal NormTotal
No Reads
droKik1
AATAGACAA------------------------------------------------------------------------TAA-TT-CAATTAAGAAATGACTGGGATTTCGGGAATATTCTGGCATTCATTTAGCAGCAACCATATTGACACTCCTTATCTGCGGTCAGCTTCT-GTT------TTTTAC-----ACCATACTCAGCGATTA-AACAATTTAAATTT--AACACTAATTCGCCTTTCG--TTGGACTTT-------GGTTTT----TTGCAGTGAC---AGCAACAATATGACCATCAAAGCTATCAAGGCCCGTCAGATCTACGSizeHit CountTotal NormTotal
No Reads
droAna3
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT----TTGCAGTGAC---AGCAGCAATATGACCATCAAGTCGATCAAGGCCCGTCAAATCTACGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................................................................................................................................AGTCGATCAAGGCCCGTCA........19112.00121100001
.....................................................................................................................................................................................................................................................................................................................AAGTCGATCAAGGCCCGTCA........2015.005500000
..............................................................................................................................................................................................................................................................................................................GACCATCAAGTCGATCAAGGCCCGTCA........2714.004110020
..................................................................................................................................................................................................................................................................................................................ATCAAGTCGATCAAGGCCCGTCA........2312.002200000
..............................................................................................................................................................................................................................................................................................................GACCATCAAGTCGATCAAGGCC.............2212.002200000
......................................................................................................................................................................................................................................................................................................................AGTCGATCAAGGCCCGTCAA.......2012.002200000
...............................................................................................................................................................................................................................................................................................................ACCATCAAGTCGATCAAGGCC.............2112.002010001
............................................................................................................................................................................................................................................................................................................ATGACCATCAAGTCGATCAAGGCCC............2512.002110000
..................................................................................................................................................................................................................................................................................................................ATCAAGTCGATCAAGGCCCGTC.........2212.002100010
..........................................................................................................................................................................................................................................................................................................................GATCAAGGCCCGTCAAATCT...2012.002200000
............................................................................................................................................................................................................................................................................................................ATGACCATCAAGTCGATCAAGGCCCGTCA........2912.002100010
..................................................................................................................................................................................................................................................................................................................ATCAAGTCGATCAAGGCC.............1812.002200000
.......................................................................................................................................................................................................................................................................................................................GTCGATCAAGGCCCGTCA........1812.002200000
...................................................................................................................................................................................................................................................................................................AGCAGCAATATGACCATCAAGTC.......................2312.002010001
...........................................................................................................................................................................................................................................................................................................TATGACCATCAAGTCGATCAAGGCCC............2612.002020000
..................................................................................................................................................................................................................................................................................................................ATCAAGTCGATCAAGGCCCG...........2011.001100000
....................................................................................................................................................................................................................................................................................................GCAGCAATATGACCATCAAGTCG......................2311.001100000
............................................................................................................................................................................................................................................................................................TGAC---AGCAGCAATATGACCATC............................2211.001000001
.....................................................................................................................................................................................................................................................................................................................AAGTCGATCAAGGCCCGTCAAATCTAC.2711.001100000
....................................................................................................................................................................................................................................................................................................GCAGCAATATGACCATCAAGT........................2111.001010000
.............................................................................................................................................................................................................................................................................................................TGACCATCAAGTCGATCAAGGCCCGTC.........2711.001000001
...............................................................................................................................................................................................................................................................................................C---AGCAGCAATATGACCATCAAGT........................2311.001100000
.......................................................................................................................................................................................................................................................................................................................GTCGATCAAGGCCCGTCAAAT.....2111.001100000
...........................................................................................................................................................................................................................................................................................................TATGACCATCAAGTCGATCAAGGCCCGT..........2811.001100000
.......................................................................................................................................................................................................................................................................................................................GTCGATCAAGGCCCGTCAAATCTACG2611.001100000
....................................................................................................................................................................................................................................................................................................GCAGCAATATGACCATCAAGTCGATC...................2611.001000001
...............................................................................................................................................................................................................................................................................................................ACCATCAAGTCGATCAAGGCCCGTC.........2511.001010000
......................................................................................................................................................................................................................................................................................................AGCAATATGACCATCAAGT........................1911.001001000
..................................................................................................................................................................................................................................................................................................................ATCAAGTCGATCAAGGCCCGTCAAATC....2711.001100000
.........................................................................................................................................................................................................................................................................................................................CGATCAAGGCCCGTCAAA......1811.001010000
..............................................................................................................................................................................................................................................................................................................GACCATCAAGTCGATCAAGGCCC............2311.001010000
...................................................................................................................................................................................................................................................................................................................TCAAGTCGATCAAGGCCCGTCAAATC....2611.001100000
.................................................................................................................................................................................................................................................................................................................CATCAAGTCGATCAAGGCCCGTC.........2311.001100000
..............................................................................................................................................................................................................................................................................................................GACCATCAAGTCGATCAAGGCCCG...........2411.001100000
...........................................................................................................................................................................................................................................................................................................TATGACCATCAAGTCGATCAAGGCC.............2511.001010000
...................................................................................................................................................................................................................................................................................................................TCAAGTCGATCAAGGCCCGTCA........2211.001100000
..................................................................................................................................................................................................................................................................................................................ATCAAGTCGATCAAGGCCCGTCAA.......2411.001010000
...................................................................................................................................................................................................................................................................................................................TCAAGTCGATCAAGGCCCGTC.........2111.001000010
............................................................................................................................................................................................................................................................................................TGAC---AGCAGCAATATGACC...............................1911.001010000
..............................................................................................................................................................................................................................................................................................AC---AGCAGCAATATGACCATC............................2011.001010000
...............................................................................................................................................................................................................................................................................................................ACCATCAAGTCGATCAAGGCCCGTCA........2611.001100000
........................................................................................................................................................................................................................................................................................................................TCGATCAAGGCCCGTCAA.......1811.001100000
......................................................................................................................................................................................................................................................................................................................AGTCGATCAAGGCCCGTCAAATC....2311.001010000
.......................................................................................................................................................................................................................................................................................................GCAATATGACCATCAAGTCGATCAAG................2611.001000001
.....................................................................................................................................................................................................................................................................................................................AAGTCGATCAAGGCCCGTCAA.......2111.001000001
.......................................................................................................................................................................................................................................................................................................................GTCGATCAAGGCCCGTCAAATC....2211.001100000
...........................................................................................................................................................................................................................................................................................GTGAC---AGCAGCAATATGACCATCAAGT........................2711.001000001
.............................................................................................................................................................................................................................................................................................................TGACCATCAAGTCGATCAAGGCCCGTCA........2811.001000001
..............................................................................................................................................................................................................................................................................................................................AAGGCCCGTCAAATCTACG1911.001100000
..................................................................................................................................................................................................................................................................................................................ATCAAGTCGATCAAGGCCC............1911.001100000
...............................................................................................................................................................................................................................................................................................................ACCATCAAGTCGATCAAGGCCCGTCAA.......2711.001100000
..................................................................................................................................................................................................................................................................................................................ATCAAGTCGATCAAGGCCCGTCAAAT.....2611.001100000
...............................................................................................................................................................................................................................................................................................C---AGCAGCAATATGACCATCAAGTCGAC....................2711.001010000
.......................................................................................................................................................................................................................................................................................................................GTCGATCAAGGCCCGTCAA.......1911.001100000
................................................................................................................................................................................................................................................................................................................CCATCAAGTCGATCAAGGCCC............2111.001100000
.......................................................................................................................................................................................................................................................................................................GCAATATGACCATCAAGTC.......................1911.001010000
...................................................................................................................................................................................................................................................................................................................TCAAGTCGATCAAGGCCC............1811.001000100
......................................................................................................................................................................................................................................................................................................................AGTCGATCAAGGCCCGTCAAATCT...2411.001000001
......................................................................................................................................................................................................................................................................................................................AGTCGATCAAGGCCCGTC.........1811.001100000
droBip1
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT----TTGCAGTGAC---AGCAGCAATATGACCATCAAGTCGATCAAGGCCCGTCAAATCTACGSizeHit CountTotal NormTotal
No Reads
dp5
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATTTGC---AGCTCCAACATGACCATCAAGGCAATCAAGGCCCGTCAAATCTACGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................................................................................................................................................AACATGACCATCAAGGCAATCA..................2212.0020200000000
..................................................................................................................................................................................................................................................................................................................ATCAAGGCAATCAAGGCCCGTCAAAT.....2612.0020200000000
..................................................................................................................................................................................................................................................................................................................ATCAAGGCAATCAAGGCCCGTCAAAC.....2611.0010010000000
.......................................................................................................................................................................................................................................................................................................................GGCAATCAAGGCCCGTCAAA......2011.0010100000000
............................................................................................................................................................................................................................................................................................................................TCAAGGCCCGTCAAATCTAC.2011.0010100000000
..............................................................................................................................................................................................................................................................................................................GACCATCAAGGCAATCAAGGCCCGTCA........2711.0010100000000
...............................................................................................................................................................................................................................................................................................................ACCATCAAGGCAATCAAGG...............1911.0010100000000
.............................................................................................................................................................................................................................................................................................................TGACCATCAAGGCAATCAAGGCCCGTC.........2711.0010100000000
..............................................................................................................................................................................................................................................................................................................GACCATCAAGGCAATCAAGGCCCGTC.........2611.0010100000000
..................................................................................................................................................................................................................................................................................................................ATCAAGGCAATCAAGGCCCGTCAAATCT...2811.0010001000000
.........................................................................................................................................................................................................................................................................................................................CAATCAAGGCCCGTCAAATC....2011.0010100000000
.............................................................................................................................................................................................................................................................................................................TGACCATCAAGGCAATCAAGGCCC............2411.0010100000000
...........................................................................................................................................................................................................................................................................................................................ATCAAGGCCCGTCAAATCTACG2211.0010100000000
..................................................................................................................................................................................................................................................................................................................ATCAAGGCAATCAAGGCCCGC..........2111.0010000100000
....................................................................................................................................................................................................................................................................................................GCTCCAACATGACCATCAAGGC.......................2211.0010100000000
............................................................................................................................................................................................................................................................................................................ATGACCATCAAGGCAATCAAGGCCCGTCA........2911.0010000001000
......................................................................................................................................................................................................................................................................................................................AGGCAATCAAGGCCCGTCA........1911.0010100000000
......................................................................................................................................................................................................................................................................................................................AGGCAATCAAGGCCCGTCAAATCT...2411.0010100000000
..........................................................................................................................................................................................................................................................................................................................AATCAAGGCCCGTCAAAT.....1811.0010100000000
..........................................................................................................................................................................................................................................................................................................ACATGACCATCAAGGCAATCAAGGCCC............2711.0010000000010
..........................................................................................................................................................................................................................................................................................................ACATGACCATCAAGGCAATC...................2011.0010001000000
.................................................................................................................................................................................................................................................................................................................CATCAAGGCAATCAAGGCCCG...........2111.0010100000000
...............................................................................................................................................................................................................................................................................................................ACCATCAAGGCAATCAAGGCCCGTC.........2511.0010000001000
droPer2
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGACCATCAAGGCAATCAAGGCCCGTCAAATCTACGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................................................................................................................................................................................................................................................AGGCCCGTCAAATCTACG1811.001000010
.............................................................................................................................................................................................................................................................................................................TGACCATCAAGGCAATCAAGGCCCGTCA........2811.001010000
...........................................................................................................................................................................................................................................................................................................................ATCAAGGCCCGTCAAATCTA..2011.001010000
.......................................................................................................................................................................................................................................................................................................................GGCAATCAAGGCCCGTCAAATC....2211.001010000
..................................................................................................................................................................................................................................................................................................................ATCAAGGCAATCAAGGCCCGTC.........2211.001010000
droWil2
C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-------TT-TTT----TTTCAGTTCA---GAAGACAATATGACCATCAAAGCGATCAAAGCCCGTCAAATCTACGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................................................................................................................................................................GACCATCAAAGCGATCAAAGCCCGT..........2530.67201100
...................................................................................................................................................................................................................................................................................................GAAGACAATATGACCATCAAAGCGA.....................2530.67220000
...................................................................................................................................................................................................................................................................................................GAAGACAATATGACCATCAAAGC.......................2330.33101000
...........................................................................................................................................................................................................................................................................................................................ATCAAAGCCCGTCAAATCTAC.2130.33101000
............................................................................................................................................................................................................................................................................................................ATGACCATCAAAGCGATCAAAGCC.............2430.33101000
...........................................................................................................................................................................................................................................................................................GTTCA---GAAGACAATATGAC................................1930.33100010
.....................................................................................................................................................................................................................................................................................................................AAAGCGATCAAAGCCCGTCA........2030.33100100
....................................................................................................................................................................................................................................................................................................AAGACAATATGACCATCAAAGCGAT....................2530.33100010
...................................................................................................................................................................................................................................................................................................GAAGACAATATGACCATCAAAGCGAT....................2630.33100010
..................................................................................................................................................................................................................................................................................................................ATCAAAGCGATCAAAGCCCGTCA........2330.33100100
..........................................................................................................................................................................................................................................................................................................ATATGACCATCAAAGCGATCAAA................2330.33100100
......................................................................................................................................................................................................................................................................................................................AAGCGATCAAAGCCCGTCAAATC....2330.33100100
.........................................................................................................................................................................................................................................................................................................AATATGACCATCAAAGCG......................1830.33110000
......................................................................................................................................................................................................................................................................................................GACAATATGACCATCAAAGCGATC...................2430.33101000
..........................................................................................................................................................................................................................................................................................................ATATGACCATCAAAGCGA.....................1830.33100010
.......................................................................................................................................................................................................................................................................................................ACAATATGACCATCAAAGCGATCA..................2430.33101000
..............................................................................................................................................................................................................................................................................................................GACCATCAAAGCGATCAAAGCCCGTC.........2630.33100100
.........................................................................................................................................................................................................................................................................................................AATATGACCATCAAAGCGAT....................2030.33100010
........................................................................................................................................................................................................................................................................................................................GCGATCAAAGCCCGTCAAATCTAC.2430.33101000
................................................................................................................................................................................................................................................................................................................CCATCAAAGCGATCAAAGCCCGTCAA.......2630.33100100
...........................................................................................................................................................................................................................................................................................GTTCA---GAAGACAATATGACC...............................2030.33101000
..........................................................................................................................................................................................................................................................................................................ATATGACCATCAAAGCGATCAAAGCCCG...........2830.33100100
........................................................................................................................................................................................................................................................................................................CAATATGACCATCAAAGCGATCAAAGCC.............2830.33110000
..............................................................................................................................................................................................................................................................................................................GACCATCAAAGCGATCAAAGCCCG...........2430.33110000
droVir3
CATATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGACCGTACTT-TTGTGCTTT-------T--TGC----TTGCAGTTCTAAAGAAAGCAACATGACCATCAAGTCGATCAAAGCACGTCAGATCTACGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................................................................................................................................................................................................AAGCACGTCAGATCTACG18117.0017435000000000000011010010000000000000000000000000000000000000100
.........................................................................................................................................................................................................................................................................................................................CGATCAAAGCACGTCAGAT.....19110.0010201001000000011002000100000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................CTAAAGAAAGCAACATGACCATCAAGT........................2719.009003100000001011001000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................................................................................GTTCTAAAGAAAGCAACAT...................................1919.009000000000000000105100100000000001000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................AAAGCACGTCAGATCTACG1918.008004000000000000001210000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................CGATCAAAGCACGTCAGATCT...2117.007005000000000000002000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................ACATGACCATCAAGTCGATCA..................2115.005005000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................CTAAAGAAAGCAACATGACC...............................2015.005000000001010000000000000000000000000000000000000000000000000030
......................................................................................................................................................................................................................................................................................................................AGTCGATCAAAGCACGTCAGAT.....2215.005120000000000000011000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................AAAGCAACATGACCATCAAGT........................2115.005001200000000001000000100000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AGCAACATGACCATCAAGTCG......................2115.005001000000000001002000100000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................CGATCAAAGCACGTCAGATCTAC.2315.005002000000000001002000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AGCAACATGACCATCAAGTCGATC...................2415.005001000000000000003010000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AGCAACATGACCATCAAGTCGATCAAA................2714.004001000000000000011100000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................ACATGACCATCAAGTCGATC...................2014.004000000000000000001010200000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................AAAGCAACATGACCATCAAGTCGATCA..................2714.004001000000000000000110000000000000001000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................ATCAAGTCGATCAAAGCACGTCA........2313.003000000000000010100000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................AGTCGATCAAAGCACGTCAGATCTACG2713.003111000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................CGATCAAAGCACGTCAGA......1813.003001000000000000000000000000000000000010000000000000000000000010
.................................................................................................................................................................................................................................................................................................AAGAAAGCAACATGACCATCAAGT........................2413.003002000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................AAGCAACATGACCATCAAGTCGATCA..................2613.003001000000000000000000110000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................CTAAAGAAAGCAACATGACCATCAAGTC.......................2812.002000100000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................ATGACCATCAAGTCGATCAAAGCA.............2412.002001000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AGCAACATGACCATCAAGTC.......................2012.002000200000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................AACATGACCATCAAGTCGATC...................2112.002000000000000000001100000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................AAGCAACATGACCATCAAGTCGATC...................2512.002000000000000000001000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................AGTCGATCAAAGCACGTCAGA......2112.002000000000000000010100000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AGCAACATGACCATCAAGT........................1912.002000100000000001000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AGCAACATGACCATCAAGTCGATCA..................2512.002001000000000000000010000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GATCAAAGCACGTCAGAT.....1812.002001000000000000010000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................AAAGAAAGCAACATGACCATCAAGTCG......................2712.002001000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GACCATCAAGTCGATCAAAGCACGTCAG.......2812.002100100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................GAAAGCAACATGACCATCAAGTCG......................2412.002000000000000000001100000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................GCAACATGACCATCAAGTCG......................2012.002000000000000000001000000000000000001000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................CGATCAAAGCACGTCAGATCTACG2412.002001000000000000000000100000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................AGTCGATCAAAGCACGTCAGATCT...2412.002100000000000000010000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................GAAAGCAACATGACCATCAAGTCGATC...................2712.002001000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................AGAAAGCAACATGACCATCA...........................2012.002000000000000000000010100000000000000000000000000000000000000000
.ATATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGACCGTACTT-TTGTGCTT.............................................................................2612.002000000000000000000000000002000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................ATCAAGTCGATCAAAGCACGTCAGATCT...2812.002000000000000000011000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................CAACATGACCATCAAGTCGATC...................2212.002002000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................CAAAGCACGTCAGATCTAC.1911.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................CATGACCATCAAGTCGATC...................1911.001000000000000000100000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TCAAGTCGATCAAAGCACGTCAGATCT...2711.001000000000000000000100000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................GTCGATCAAAGCACGTCAGA......2011.001000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................................................................CAAGTCGATCAAAGCACGTCAGAT.....2411.001000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................................................GAAAGCAACATGACCATCAAGTCGATCA..................2811.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................CAACATGACCATCAAGTCGATCA..................2311.001000000000000000000010000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................GTCGATCAAAGCACGTCAGAT.....2111.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................ATGACCATCAAGTCGATCAAAGC..............2311.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................AGAAAGCAACATGACCATCAAGTCG......................2511.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................AAAGAAAGCAACATGACCA..............................1911.001000000000000000000100000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TCAAGTCGATCAAAGCACGTCAGATCTA..2811.001000000000001000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TCAAAGCACGTCAGATCTAC.2011.001000000000000000000000000000000000000000000000000000000000000100
............................................................................................................................................................................................................................................................................................................................TCAAAGCACGTCAGATCTT..1911.001000000000000000100000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................ATCAAGTCGATCAAAGCACGTC.........2211.001000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................CATGACCATCAAGTCGATCAAAGCAC............2611.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................CAAGTCGATCAAAGCACGTCAGA......2311.001000000000000000010000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TCAAAGCACGTCAGATCTACG2111.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GACCATCAAGTCGATCAAAGCACGT..........2511.001000000000000000000000000000000000001000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TAAAGAAAGCAACATGACCATCAAGTCG......................2811.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................AAAGCAACATGACCATCAA..........................1911.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................AGAAAGCAACATGACCATCAA..........................2111.001000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................ACCATCAAGTCGATCAAAGCACGTC.........2511.001000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................................AAAGAAAGCAACATGACCATCAAG.........................2411.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................CAAGTCGATCAAAGCACGTCAG.......2211.001000000000000000000000000000000000100000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................TCGATCAAAGCACGTCAGATCTA..2311.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................CTAAAGAAAGCAACATGACCA..............................2111.001000000000000001000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................AAGCAACATGACCATCAAGTCGATCAA.................2711.001000000000000000000100000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................AAGCAACATGACCATCAAGT........................2011.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................TGACCATCAAGTCGATCAAAGC..............2211.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................GAAAGCAACATGACCATCAA..........................2011.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................AGTCGATCAAAGCACGTCAGATC....2311.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................CAAGTCGATCAAAGCACGTCA........2111.001000000000000000000000000000000000100000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................AAGCACGTCAGATCTACA1811.001100000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................CATCAAGTCGATCAAAGCACGTCAGATCTAC.3111.001000000000000000000000000000000000000000000000000000000000010000
.......................................................................................................................................................................................................................................................................................................................GTCGATCAAAGCACGTCAGATCT...2311.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................GTCGATCAAAGCACGTCAGATC....2211.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................ATGACCATCAAGTCGATCA..................1911.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................AGAAAGCAACATGACCATCAAGTC.......................2411.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................AAAGCAACATGACCATCAAGTCG......................2311.001000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................GCAACATGACCATCAAGTCGATCA..................2411.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................GTCGATCAAAGCACGTCAGATCTACG2611.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................GTCGATCAAAGCACGTCAGATCTA..2411.001000000000000000000000100000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................ACATGACCATCAAGTCGATCAA.................2211.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................AGAAAGCAACATGACCATCAAGT........................2311.001000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GACCATCAAGTCGATCAAAGCACGTCAGA......2911.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................CGATCAAAGCACGTCAGATC....2011.001100000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................AAGTCGATCAAAGCACGTCAGAT.....2311.001000000010000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................GTCGATCAAAGCACGTCAG.......1911.001000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AGCAACATGACCATCAAGTCGAT....................2311.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................AAGCAACATGACCATCAAGTC.......................2111.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................TGACCATCAAGTCGATCAAAGCACGTCA........2811.001000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TAAAGAAAGCAACATGACCATCAAGT........................2611.001000010000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................CAAGTCGATCAAAGCACGT..........1911.001000000000000000000100000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................GCAACATGACCATCAAGTCT......................2011.001000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................................................................................................................................................................ATCAAAGCACGTCAGATCT...1911.001000000000000000000000100000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AGCAACATGACCATCAAGTCGATCAA.................2611.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................CATCAAGTCGATCAAAGCACGT..........2211.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................ACATGACCATCAAGTCGAT....................1911.001000000000000000000010000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................AGAAAGCAACATGACCATCAAGTCGATC...................2811.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................CAAAGCACGTCAGATCTACG2011.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................AGAAAGCAACATGACCATCAAGTCGATCA..................2911.001000000000000000000000000000000000000000000000000000000000000100
...........................................................................................................................................................................................................................................................................................GTTCTAAAGAAAGCAACATGA.................................2111.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................ATCAAGTCGATCAAAGCACGT..........2111.001000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................CTAAAGAAAGCAACATGACCATCA...........................2411.001000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................GTCGATCAAAGCACGTCAGATCTAC.2511.001000000000000000000000000000000000000010000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TCAAGTCGATCAAAGCACGTCA........2211.001000000000000000000100000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................GTTCTAAAGAAAGCAACA....................................1811.001000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AGCAACATGACCATCAAGTCGATCAAAG...............2811.001000000000000000000100000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................CATCAAGTCGATCAAAGCACGTCAG.......2511.001000000000000000000100000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................CATGACCATCAAGTCGATCA..................2011.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................GTTCTAAAGAAAGCAACATGACCATCAA..........................2811.001000000000000000000100000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................GCAACATGACCATCAAGTCGATCAAAG...............2711.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................CTAAAGAAAGCAACATGACCATC............................2311.001000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TCAAGTCGATCAAAGCACGTCAGA......2411.001000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................................ATCAAGTCGATCAAAGCACGTCAGAT.....2611.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................TCTAAAGAAAGCAACATGACCATCAA..........................2611.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................AAAGCAACATGACCATCAAGTCGATC...................2611.001000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................AAGTCGATCAAAGCACGTCAGATCTACG2811.001000000000000000000000010000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TAAAGAAAGCAACATGACCATC............................2211.001000000000000000000000100000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................CATGACCATCAAGTCGATCAAAGCA.............2511.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................GAAAGCAACATGACCATCAAGTCGATCC..................2811.001000000000000000000100000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................AACATGACCATCAAGTCGATCAAAGC..............2611.001000000000000000000010000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................TCTAAAGAAAGCAACATGACCAT.............................2311.001000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................................................................................................................................GTTCTAAAGAAAGCAACATGAC................................2211.001000000000000000000000100000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................AAAGAAAGCAACATGACCATCA...........................2211.001000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................AAGTCGATCAAAGCACGTCAGATCT...2511.001000000000000000000010000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................CTAAAGAAAGCAACATGAC................................1911.001000000000000010000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................AACATGACCATCAAGTCGATCAAA................2411.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GATCAAAGCACGTCAGATCT...2011.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................AAGCAACATGACCATCAAGTCGATCAAA................2811.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................AAAGAAAGCAACATGACCATCAAGT........................2511.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................TCTAAAGAAAGCAACATGACCATCAAGT........................2811.001000000000000000000000000100000000000000000000000000000000000000
droMoj3
AT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAACGCAC---CTTTTTTTAAATCT-------G---TT----TTGCAGTTCTAAAAAAAGCAACATGACCATCAAGTCGATCAAAGCACGTCAAATCTACGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................................................................................................................................................................................AGTCGATCAAAGCACGTCA........1913.003200001
.......................................................................................................................................................................................................................................................................................................................GTCGATCAAAGCACGTCAA.......1912.002200000
......................................................................................................................................................................................................................................................................................................AGCAACATGACCATCAAGTCG......................2112.002000002
.......................................................................................................................................................................................................................................................................................................GCAACATGACCATCAAGTCG......................2012.002100001
..............................................................................................................................................................................................................................................................................................................GACCATCAAGTCGATCAAAG...............2011.001100000
......................................................................................................................................................................................................................................................................................................AGCAACATGACCATCAAGTCGATCA..................2511.001100000
.........................................................................................................................................................................................................................................................................................................................CGATCAAAGCACGTCAAAT.....1911.001100000
..................................................................................................................................................................................................................................................................................................................ATCAAGTCGATCAAAGCACGTCAAATC....2711.001000100
..............................................................................................................................................................................................................................................................................................CTAAAAAAAGCAACATGACCATCAAGTCG......................2911.001000001
......................................................................................................................................................................................................................................................................................................AGCAACATGACCATCAAGTCGATC...................2411.001100000
.........................................................................................................................................................................................................................................................................................................AACATGACCATCAAGTCGATC...................2111.001000100
........................................................................................................................................................................................................................................................................................................CAACATGACCATCAAGTCG......................1911.001100000
..............................................................................................................................................................................................................................................................................................................................AAAGCACGTCAAATCTACG1911.001000001
................................................................................................................................................................................................................................................................................................AAAAAAAGCAACATGACCAT.............................2011.001100000
..........................................................................................................................................................................................................................................................................................................ACATGACCATCAAGTCGATCAAA................2311.001100000
......................................................................................................................................................................................................................................................................................................................AGTCGATCAAAGCACGTCAAAT.....2211.001000001
..................................................................................................................................................................................................................................................AC---CTTTTTTTAAATCT-------G---TT----TTGCAG.....................................................2511.001100000
droGri2
TGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-------GG--------TTGCAGTTCCAACGGTATCAACATGACCATCAAGTCGATCAAAGCACGTCAGATCTACGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......................................................................................................................................................................................................................................................................................................TCAACATGACCATCAAGTCG......................2011.00101
...........................................................................................................................................................................................................................................................................................................CATGACCATCAAGTCGATCAAAGC..............2411.00110
..........................................................................................................................................................................................................................................................................................................ACATGACCATCAAGTCGATCAAA................2311.00110
................................................................................................................................................................................................................................................................................................AACGGTATCAACATGACCATCA...........................2211.00110

Generated: 05/19/2015 at 05:45 AM