ID:

dsi_20447

 Coordinate:

3r:5179638-5179859 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-34.1 -34.1 -34.0

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

ATTGAGTGCCAGTAGCACCAGCTTGAATATGCAGGCCACCAGTGCGGCAGGTAATTAGAAGCAGTTTTCTATCTTGACGCGTCTCTAGTTTCAAAATCGAATATACTTCACTTTAGAAAGCTATACGTGTTTTGATACAGCTAAACATTTTCTGCGTTTGTTACTTATTGGTTTTTAGGTTAAAAAGATCTGTTTTAAGTTTAATTTTAATTTGGTTTCCATTTCCCAACGAAAACATTGTACAGATGTTTTTCAATATTACTGAACAACAGGTGGCCACCAGCAACAGCACTCTGAGCAGCAGCCCCATTCCGCCACCAAA
**************************************************.....((((((..((((..((((..(((((((...(((((((.(((..(((.....)))..))).)).))))).)))))))..)))).....))))..))))))..((((((......(((...(((((((((((....((......)).....)))))))))))...)))......))))))....((((.((((((((....)))))..))).))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
 M053
female body
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 O001
Testis
.....................................................................................................................................................................................................................................................................................CACCAGCAACAGCACTCTGAGCAGC.................... 25 0 1 4.00 4 2 2 0 0 0 0 0 0 0 0
.....................................................................TATTTTGACTCGTCTCTAGTTT....................................................................................................................................................................................................................................... 22 2 1 2.00 2 0 0 0 0 2 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................CAGCACTATGAGCGGCAGCCC............... 21 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................................................................................................CACCAGCAACAGCACTCCGAGCAGC.................... 25 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................ACCAGCAACAGCACTCTGAGCAGCAG.................. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................CAATATTACTGAACAACAGGT................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................GTTCTGCGTTTGTTACT............................................................................................................................................................. 17 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................................................TCAATATTACTGAACAACAGGT................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................TGGCCACCAGCAACAGCACTCTGAGCAGC.................... 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................CAACAGCACTCTGAGCAGCAGCCC............... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................................................AACAGCACTCTGAGCAGCAGCCCC.............. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................CAATATTACTGAACAACAGGTGGCC............................................ 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TTCCCAACGAAAACATTGTACAG............................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................................................................................................................................................................CCACCAGCAACAGCACTC............................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TTCTGCGTATGTTACT............................................................................................................................................................. 16 1 3 0.33 1 0 0 0 0 0 0 0 1 0 0
.......................................................TAGAAGCAGTTTGCGATCGT....................................................................................................................................................................................................................................................... 20 3 6 0.17 1 0 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................................................................................ACTGAACAAGAGGTGG.............................................. 16 1 6 0.17 1 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................TACGGAACAACAGTTGG.............................................. 17 2 7 0.14 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................ACTGCGTTTGTTACT............................................................................................................................................................. 15 1 9 0.11 1 0 0 0 0 0 0 0 1 0 0
.......................................................................................................................................................................................................................................................................................................GATCAGCTGCCCCATTCC......... 18 2 10 0.10 1 0 0 0 0 0 0 0 0 0 1
.................................................................GTTCTGTCTTGGCGCGTCT.............................................................................................................................................................................................................................................. 19 3 16 0.06 1 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................GCGGATGTTACTTATAGG....................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................TGGTTTGTAGGGTAAAAAAA...................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0
..............................................................................................................................................................................................................................................................................AGGTGGCAACCAGCATC................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

TAACTCACGGTCATCGTGGTCGAACTTATACGTCCGGTGGTCACGCCGTCCATTAATCTTCGTCAAAAGATAGAACTGCGCAGAGATCAAAGTTTTAGCTTATATGAAGTGAAATCTTTCGATATGCACAAAACTATGTCGATTTGTAAAAGACGCAAACAATGAATAACCAAAAATCCAATTTTTCTAGACAAAATTCAAATTAAAATTAAACCAAAGGTAAAGGGTTGCTTTTGTAACATGTCTACAAAAAGTTATAATGACTTGTTGTCCACCGGTGGTCGTTGTCGTGAGACTCGTCGTCGGGGTAAGGCGGTGGTTT
**************************************************.....((((((..((((..((((..(((((((...(((((((.(((..(((.....)))..))).)).))))).)))))))..)))).....))))..))))))..((((((......(((...(((((((((((....((......)).....)))))))))))...)))......))))))....((((.((((((((....)))))..))).))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 M053
female body
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 M025
embryo
..............................................................................................................................................................................................................................................................................................GTCGTGAGACCCGTCTTCTGGGT............. 23 3 1 1.00 1 1 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................TCGAGAGACTCGATGTCGGGG.............. 21 3 3 0.33 1 0 0 1 0 0 0
.........................................................................................................................................................................................................................................................................................TCGTTGTGCTGAGACTCG....................... 18 2 3 0.33 1 0 1 0 0 0 0
...................................................................AGATAGAATTGCGCCGA.............................................................................................................................................................................................................................................. 17 2 7 0.14 1 0 0 0 1 0 0
...................................................................AGACAGAGCTGCGCAGA.............................................................................................................................................................................................................................................. 17 2 9 0.11 1 0 1 0 0 0 0
........................................TCAAGCCGTCCACTAACCTT...................................................................................................................................................................................................................................................................... 20 3 9 0.11 1 0 0 0 1 0 0
.........................................................................................................................................................................................................................................TTGTAACATGTCTAG.......................................................................... 15 1 16 0.06 1 0 0 0 0 1 0
.................................................................................................................................................................................CCAAGTTTTCTAGACAATG.............................................................................................................................. 19 3 19 0.05 1 0 0 0 0 0 1
.................................................................................AGAGATCGAAGTTTAAG................................................................................................................................................................................................................................ 17 2 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:5179588-5179909 - dsi_20447 ATTGAGTGCCAGTAGCACC---AGCTTG---AATATGCAGGCCACCAGTGC------------GGCAGGTAA---------------------TTAGAAGCAGTTTTCTATCTTGACGCGTCTCTAGTTTCAAAAT-----CGAATATACTT-CACTTTAGAAAGCTATACGTGTTTTG-ATACAGCTAAACA-TTTTCT-GCGTTTGTTAC----------------------T----------------------------------------TATT---------------------------------------------------------------------------------------------------------GGTTTTTAGGTTAAA------------------------AAGATCTGTTTTAAGTTTA-ATTTTAATTTGGTTTCCA--TTTCC-CAA---------------CGAAAACATTGTACAGATGTTTTTCAATATTACTGAACAACAGGTGGC---CACCAGCAA------CAGC---------------------------------ACTCTGAGCA---GCAGC------CCC---------------ATTCCGCCACCAAA-
droSec2 scaffold_27:612822-613144 - ATTGAGTGCCAGTAGCACC---AGCTTG---AATATGCAGGCCACCAGTGC------------GGCAGGTAA---------------------TTAGAAGCTATTTTCTATCTTGACGCGTCTCTAGATTCAAAAT-----CGAATATACTT-CACTTTAGAAAGCTATACGTGTTTTGAATATAGCTAAACA-TTTTCT-GCGTTTGTTAC----------------------T----------------------------------------TATT---------------------------------------------------------------------------------------------------------GGTTTTCAGGTTAAA------------------------AAGATCTGTTTTAAGTTTA-TTTTTAATTTGGTTTCCA--TTTCC-CAA---------------CGAAAACATTGTACAGATGTTTTTCAATATTACTGAACAACAGGTGGC---CACCAGCAA------CAGC---------------------------------ACTCCGAGCA---GCAGC------CCC---------------ATTCCGCCACCAAA-
dm3 chr3R:16126085-16126406 + ATTGAGTGCCAGTAGCACC---AGCTTG---AATATGCAGACCACCAGTGC------------GGCAGGTAA---------------------TTAGAAGAAGTTTTCTATCATGACGCGTCTGTAGGATCAAAAT-----CGAATTAACTT-CACTTTTGAAAGCTATGCGTTTTTTG-ATATAGCTAAACA-TTTTCT-GCGTTTGTTAC----------------------T----------------------------------------TATT---------------------------------------------------------------------------------------------------------GGTTTTTAGGTTATA------------------------AAGATCTGTTTTAAGTTTA-ATTTTAATTTGATTTCCA--TTTCC-CAA---------------CGAAAACATTGTACAGATGTTTTTCAATATTACTGAACAACAGGTGGC---CACCAGCAA------CAGC---------------------------------ACTCTGAGCA---GCAGC------CCC---------------ATTCCGCCACCAAA-
droEre2 scaffold_4770:5555439-5555762 - ATTGAGTGCCAGTAGCGCC---AGCTTG---AATATGCAGGCCACCAGTGC------------GGCAGGTAA---------------------TTAGAAGCAGT-----ATATTGACGTGCCTCTAGATTCAAAACTTAAGCGTATTAAATTGC---TTATGATGCA------GTTTTG-ATATAGCTAAACA-TTTCCTGTCGTTTGACAT----------------------T----------------------------------------TATT---------------------------------------------------------------------------------------------------------GGTTTTTA-----AAAGTTGTTTTTTTT-T---------AAGAAATGATTTAAGTTTA-ATTTTATTTTGGTTTCCA--TTTCC-CAA---------------CGAAAACATTGTACAGATGTTTTTCAATATTACTGAACAACAGGTGGC---CACCAACAA------CAGC---------------------------------ACTCTGAGCA---GCAGC------CGC---------------ATTCCGCCACCAAA-
droYak3 3R:4901673-4901933 + TTTT---------------------------------------------------------------------------------------------------------ATATAGATGCGTCTCTTGATTCAAAAATTAAGCGAATTAAATTTC---TAATAAAGCA------GTTTTA-ATGTAGCTGAACTGTTTTTT-GCGCTTGTTGT----------------------T----------------------------------------TATT------------------------------------------------------------------------------------------------TATTT-T-TTGTTTTTAGGTTAAA------------------------TAGAAATGTTTTAAGTTTA-ATTTTAATTTGGTTTCCA--TTTCC-CAA---------------CGAAAACATTGTACAGATGTTTTTCAATATTACTGAATAACAGGTGGC---CACCAACAA------CAGC---------------------------------ACTCTGAGCT---GCAGC------CCC---------------ATCCCGCCACCAAC-
droEug1 scf7180000409804:2444484-2444664 + TCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------T----------------------------------------TTTC---------------------------------------------------------------------------------------------------------GGATTTTACTTTATA---------------AGCATTCATTT--CATTATTTGAACTAT-TTTTTAATTTCATTTCCA--CTTCT-CAA---------------TGAAAACATTGTAAAGATGTTTTACCATATTTTTGAACGACAGGTGGT---CACCAACAA------CAACAACA---GC------------------AGCAACACTCTGAGCA---GCCGA------ACC---------------ATCCCGCCACCAAA-
droBia1 scf7180000302402:1913874-1914041 + TTTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA--ATCTT----TTTTTCAACCTGCAATATTTTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------TATTATTTGAGTTTA-ATTTTAATTTCATTTTCA--TC-CC-TAA---------------CGAAAACATTGTACAGATGTTTTTCAATATTACTGAACGACAGGTGGA---CACCAACAA------CAGC---------------------------------ACTCCGAGCA---GCAGC------CCC---------------AGCCCGCCGCCAAA-
droTak1 scf7180000415013:57538-57700 + TTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------------T----------------------------------------TT-----------------------------------------------------------------------------------------------------------TATCTTTAATTTAAA------------------------TATA---TATTTGAGTTTA-ATTTTGATTTAATTTCCT--TTTCT-CAA---------------TGAAAACATTGTACAGATGTTTTTCAATATTACTGAACGACAGGTGGT---CAACAACAA------CAGC---------------------------------ACTCTGAGCA---GCAGCAGCAGCCCC---------------ATCCCGCCACCAAA-
droEle1 scf7180000491008:793413-793700 - GTTGAGTGCAAATAGCACC---GGCTTG---AATGTGCAGGCCACCAATGC------------AGCAGGTAA---------------------TTGGAACCCGT-----------------CTAAAGT----AATCTTAAATGGAATTAATTTC---TTAAAGT------------------------------------------------CCAATAATTCATTCTATAG----TTTTG----AG--------------------ATTTGAGTTTATT------------------------------------------------------------------------------------------------TTATT---------------------------------TTAGTCCTT-----CATAAATTGAGTTTA-ATTTTAATTTAGTTTCCC--TTTCT-CAA---------------TGAAAACATTGTACAGATGTTTTTCAATATTAATAAACGACAGGTGGA---CACCAATAA------CAGC---------------------------------ACTCTGAGCA---GTAGC------CGC---------------ATCCCGTCCGCAAT-
droRho1 scf7180000768020:51003-51368 - ATTAAGTGCCG------------GCTTG---AATGTGCAGGCCACGAATGC------------AGCGGGTAA---------------------ATAGAATTTGT---CAA---------------------------------AATATCTCC-TAT-----AAAAAA------GTTTTC-CT-------------------------------------TTAATTTTGTGA----TTTCAAAAACCTTTCAAT---A----TTA-----AGAGACTATTAAATTATTTCTCTTGAATTCAACTTTTCTACTTTTAAAGATTTTTGTTAATACTTCTTAAACAATATTAAAGTCTGTG-------CTAACACGGCCTAATTTTACTG------------------------------------TTT--CACATTTTGAGTTAC-ATTTTAATTTAGTTTCCA--TTTCT-CCA---------------TGAAAACATTGAATAGATGTTTTTCAATATTACTAAACTACAGGTGGT---CACCAACAA------CAGC---------------------------------ATTCTGAGCA---GCAAC------CGC---------------ATCCCGCCAGCAAA-
droFic1 scf7180000453213:19437-19595 + TTA--------------T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGC-----------------T---TAATAACTTGT------------------------------------------------------------------------------------------------------------------------------------------------------------TA--TACATTTTGAGTTAA-ATTTTAATTTAGTTTCCA--TTTCT-CAA---------------TGAAAACATTGTACAGATGTTTTTCAATATTACTAAACGGCAGGTGGTGGTCACCAACAA------CAGC---------------------------------ACTCTGAGCA---ACAGC------CCC---------------ATCCCGCCAGCAAA-
droKik1 scf7180000302650:45416-45673 + ACTGAGCGCCAGTAGCACT---GGACTTAACAATGTGCAGGCCGGCAATGCTCCGCCCAATGGAACAGGTAAACAAGCAAGATGCTAAATTACTTGGAAGGGGCTTCT---------------------------------------------------------------------------------------------------------------------------TAGT----------------------------TTTCTTT----------------------------------------------------------------------------------------------------------CAC------GTTCT----------------------TG-GT------TA--CCTTCTTCAATTTGCATTTTTAATTTAGTTTCGA--TTTCC-CAA---------------TGAAAACATTTT-TAGATGTTTTTCAATATTACTAAACGGCAGGTGCA---CACCAGCAA------C------------------------------------ACTCGGAGC------AGC------CGC---------------ATTCCTTTTGCAAA-
droAna3 scaffold_13340:2660751-2661040 + TCTAAGTAGCGG------T---GGCCTA---AGTGCCCAGGCAACCAATGCACCACCCACCACAGCAGGTAC---------------------TTTCCTCCAGTCTGATCTATTGA---------------------------GATTTTTTT-TCT--------------------------------------------------------TTGAGAAAAAAGTTTATAA----G----------------------------------------------------------------------------------ATTTCTGTTAA-----------------------CTGTGAAATCCACT---------TAAAA---------------------------------T---------AAGTTCTACTTTTATTTGC-TTTTTAATTTAGTTTCAA--TTTCC-TAA---------------TGAAAACATTGTAAAGATGTTTTTCAATATTACTAAACTACAGGTGCG---CACCAATCA------CACCCA---------------------------C---ATGCCGAGCAACAAAAGT------CAC---------------ATGTTGTGGGAAAA-
droBip1 scf7180000396712:1678542-1678803 - A---AGTCTAAGTAGCGGA---GGCCTA---AGTGCGCAGGCAAACAATGCAACACCCACCGCAGCAGGTAT---------------------AT------------AT------------CTGTAG------------------------------------AGATTTGGTTCCTTTG-ATAAAACAAA---------------------------------GTT--------------------------CCTACAAA------------GTTTG---------------------------------------------------------------------------------------CT---------TAAAG---------------------------------T---------TAGTCCTACTTTTATTTGC-TTTTTAATTTAGTTTCAA--TTTCT-TAA---------------TGAAAACATTGTAAAGATGTTTTTCAATATTACTAAATCACAGGTGCC---CACCAACAA------CACTCG---------------------------GAGCACCA---------AAAGT------CGC---------------ATGCTGCGGGAAAAT
dp5 2:27560126-27560413 - GCTGAGCGCCAACAGT------------------GCACACACCACAAACGCGACACCGAATGCGGCAGGTAA---------------------TTGGAGGGCGCTCTGCA---------------------------------AATATCTTC-TAC--------------------------------------------------------CCAAGAACTAAATCTGTAA----TTTCC----CCTTTCAAT---GAATATCTTTCTTTGAC---------------------------------------------------------------------------------------------------------TT-T-CTGTTCG----------------------TGCGCTACCCCTT--C--AATTCGATTTGT-TTGTTAATTTAGTTTCCA--TTTCT-CAA---------------TGAAAACATTGTTAAGATGTTTTTCAATATTACTAAACGGCAGGTGTA---AAGGAGCAG------CAGCAG---------------------------CAGGACTT---------GGAGC------AGC---------------ATTCTCAGGGCAAA-
droPer2 scaffold_6:2879727-2880014 - GCTGAGCGCCAACAGT------------------GCACACACCACAAACGCGACACCGAATGCGGCAGGTAA---------------------TTGGAGGGCGCTCTGCA---------------------------------AATATCTTC-TAC--------------------------------------------------------CCAAGAACTAAATCTGTAA----TTTCC----CCTTTCAAT---GAATATCTTTCTTTGAC---------------------------------------------------------------------------------------------------------TT-T-CTGTTCG----------------------TGCGCTACCCCTT--C--AATTCGATTTGT-TTGTTAATTTAGTTTCCA--TTTCT-CAA---------------TGAAAACATTGTTAAGATGTTTTTCAATATTACTAAACGGCAGGTGTA---AAGGAGCAG------CAGCAG---------------------------CAGGACTT---------GGAGC------AGC---------------ATTCTCAGGGCAAA-
droWil2 scf2_1100000004902:10718025-10718288 - GTTGAGTATTGGTAGTGGTGCCAGC------------CAAACAACTAACAATGCAAATAATCATGCAGGTAA---------------------TATAAAATA-------------------------------------------------------------------------------TATA--------------------------------------ATT--------------------------AAAACATT------------ATT--------------------------------------------------------------------------------TG-------TTAACATGCTTTTATATTTTGGTTTTT--------------------------------------AATTTTGTGT-----TT-----TTTTTTTCTT--TTTCTTTTAAAAAATATAATTCTTCCGAATCGTTTTAAAGATGTTCTTCAATATTACTAAAC---AGGTATG---CAGG---CCGAGCAACAGCAACAACAAC------------------------AACAACATCA---TCAGC------AAT---------------ATCTTAGCAATAAA-
droVir3 scaffold_13047:2575489-2575639 - TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAATTTGAATTTCCTTTTTCTATTG---------------TGAAAACATTGTATAGATGTTTTTCCGTATTACTATACGACAGGTATG---CACCAGCAA------CATCAACA---GC------------AGCAACAACAACTTGCGGAGCA---ACAACAACAGCAG---------CAGGTGAATCATCTTAACAAA-
droMoj3 scaffold_6540:19816617-19816785 - T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTGAATTCCCCTTTTCTATTC---------------TGAAAACATTGTATAGATGTTTTTTCGTATTATTATGCGACAGGTATG---CACCAGCCACACTAATAGAAACAACAAAGGCAACATCAACAGCAACAACGACGCTCGGAGCA---GCAACTACAACAA---------CAATAG-AAACAGCAACCACA-
droGri2 scaffold_15074:7141711-7141858 - T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTTGATTTCTT--TTTCTATTA---------------CGAAAACATTGTACAGATGTTTTTCCGTATTACTATACAACAGGTATG---CACCAGCAA------CATCAAC------------------------AACAACTCGCTGAGCA---ACAACAACAGCAGTGTCTGCAACAGGTGAATCATCTTAACAAA-

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATTGAGTGCCAGTAGCACC---AGCTTG---AATATGCAGGCCACCAGTGC------------GGCAGGTAA---------------------TTAGAAGCAGTTTTCTATCTTGACGCGTCTCTAGTTTCAAAAT-----CGAATATACTT-CACTTTAGAAAGCTATACGTGTTTTG-ATACAGCTAAACA-TTTTCT-GCGTTTGTTAC----------------------T----------------------------------------TATT---------------------------------------------------------------------------------------------------------GGTTTTTAGGTTAAA------------------------AAGATCTGTTTTAAGTTTA-ATTTTAATTTGGTTTCCA--TTTCC-CAA---------------CGAAAACATTGTACAGATGTTTTTCAATATTACTGAACAACAGGTGGC---CACCAGCAA------CAGC---------------------------------ACTCTGAGCA---GCAGC------CCC---------------ATTCCGCCACCAAA-SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAGCAA------CAGC---------------------------------ACTCTGAGCA---GC..........................................2514.00402200000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGCAA------CAGC---------------------------------ACTCTGAGCA---GCAG........................................2611.00100000010000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATATTACTGAACAACAGGT...................................................................................................................2111.00101000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATATTACTGAACAACAGGT...................................................................................................................2211.00101000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGC---CACCAGCAA------CAGC---------------------------------ACTCTGAGCA---GC..........................................2911.00100000010000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA------CAGC---------------------------------ACTCTGAGCA---GCAGC------CC...............................2411.00101000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------CAGC---------------------------------ACTCTGAGCA---GCAGC------CCC---------------...............2411.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATATTACTGAACAACAGGTGGC---C............................................................................................................2511.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCC-CAA---------------CGAAAACATTGTACAG................................................................................................................................................2311.00100010000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---CACCAGCAA------CAGC---------------------------------ACTC.....................................................1811.00101000000000000000
droSec2
ATTGAGTGCCAGTAGCACC---AGCTTG---AATATGCAGGCCACCAGTGC------------GGCAGGTAA---------------------TTAGAAGCTATTTTCTATCTTGACGCGTCTCTAGATTCAAAAT-----CGAATATACTT-CACTTTAGAAAGCTATACGTGTTTTGAATATAGCTAAACA-TTTTCT-GCGTTTGTTAC----------------------T----------------------------------------TATT---------------------------------------------------------------------------------------------------------GGTTTTCAGGTTAAA------------------------AAGATCTGTTTTAAGTTTA-TTTTTAATTTGGTTTCCA--TTTCC-CAA---------------CGAAAACATTGTACAGATGTTTTTCAATATTACTGAACAACAGGTGGC---CACCAGCAA------CAGC---------------------------------ACTCCGAGCA---GCAGC------CCC---------------ATTCCGCCACCAAA-SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................AAGCTATACGTGTTTTGAATATAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAGCAA------CAGC---------------------------------ACTCCGAGCA---GC..........................................2511.0010010
dm3
ATTGAGTGCCAGTAGCACC---AGCTTG---AATATGCAGACCACCAGTGC------------GGCAGGTAA---------------------TTAGAAGAAGTTTTCTATCATGACGCGTCTGTAGGATCAAAAT-----CGAATTAACTT-CACTTTTGAAAGCTATGCGTTTTTTG-ATATAGCTAAACA-TTTTCT-GCGTTTGTTAC----------------------T----------------------------------------TATT---------------------------------------------------------------------------------------------------------GGTTTTTAGGTTATA------------------------AAGATCTGTTTTAAGTTTA-ATTTTAATTTGATTTCCA--TTTCC-CAA---------------CGAAAACATTGTACAGATGTTTTTCAATATTACTGAACAACAGGTGGC---CACCAGCAA------CAGC---------------------------------ACTCTGAGCA---GCAGC------CCC---------------ATTCCGCCACCAAA-SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGCAA------CAGC---------------------------------ACTCTGAGCA---GCAGC------.................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACTGAACAACAGGTGGC---CACCA........................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGCAA------CAGC---------------------------------ACTCTGAGCA---GC..........................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ATTGAGTGCCAGTAGCACC---AGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ATTGAGTGCCAGTAGCACC---AGCTTG---AAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTCAATATTACTGAACAACAGGTG..................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGCAA------CAGC---------------------------------ACTCTGAGCA---G...........................................2312.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------CAGC---------------------------------ACTCTGAGCA---GCAGC------CC...............................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------CAGC---------------------------------ACTCTGAGCA---GC..........................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGGTGGC---CACCAGCAA------CAGC---------------------------------A........................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAGCAA------CAGC---------------------------------ACTCTGAGC................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAGCAA------CAGC---------------------------------ACTCTGAGCA---GCAGC------.................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------------------------ACTCTGAGCA---GCAGC------CCC---------------ATTC...........2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TTG---AATATGCAGACCACCAGTGC------------GG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGCAA------CAGC---------------------------------ACTCTGAGCA---GCAG........................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGCAA------CAGC---------------------------------ACTCTGAGCA---GCA.........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TAGCTAAACA-TTTTCT-GCGTTTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCA---GCAGC------CCC---------------ATTCCG.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................GTAGGATCAAAAT-----CGAATTAACTT-CA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA------CAGC---------------------------------ACTCTGAGCA---GC..........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGCAA------CAGC---------------------------------ACTCTGAGCA---GCAGC------C................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--TTTCC-CAA---------------CGAAAACATTGTAC..................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA------CAGC---------------------------------ACTCTGAGCA---GCA.........................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.................................TATGCAGACCACCAGTGC------------GGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCAATATTACTGAACAACAGGTGG.................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGCAA------CAGC---------------------------------ACTCTGAGCA---GCA.........................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGCAA------CAGC---------------------------------ACTCTGAGCA---............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACTGAACAACAGGTGGC---CACCA........................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................GTTTTTTG-ATATAGCTAAACA-.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------CAGC---------------------------------ACTCTGAGCA---GCA.........................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGC---CACCAGCAA------CAGC---------------------------------ACTCTGCA.................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TGAGTGCCAGTAGCACC---AGCTTG---AA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGCAA------CAGC---------------------------------ACTCTGAGCA---............................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGAACAACAGGTGGC---CACCAGCAA------C.............................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................GTTTGTTAC----------------------T----------------------------------------TATT---------------------------------------------------------------------------------------------------------GGTTTTTAGGT............................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AGTGCCAGTAGCACC---AGCTTG---........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCA--TTTCC-CAA---------------CGAAAACATTGTACAG................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGAGCA---GCAGC------CCC---------------ATTCCGC........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CTTG---AATATGCAGACCACCAGTGC------------GGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GTGCCAGTAGCACC---AGCTTG---AA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCC-CAA---------------CGAAAACATTGTACAT................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCC-CAA---------------CGAAAACATTGTACAG................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTTTTAAGTTTA-ATTT........................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGAACAACAGGTGGC---CAC..........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA------CAGC---------------------------------ACTCTGAGCA---GCAGC------CCC---------------...............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCA--TTTCC-CAA---------------CGAAAACATTGTACA.................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAA------CAGC---------------------------------ACTCTGAGCA---GCAGC------.................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GTAGCACC---AGCTTG---AATATGCAGACCACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAATATTACTGAACAACAGGTGG.................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GGTTATA------------------------AAGATCTGTTTTAAGT................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC-CAA---------------CGAAAACATTGTACAG................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCC-CAA---------------CGAAAACATTGTACAG................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA------CAGC---------------------------------ACTCTGAGCA---GCAGC------CCC---------------...............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---------------CGAAAACATTGTACAG................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAGCAA------CAGC---------------------------------ACTCTGAGCA---GC..........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CC---AGCTTG---AATATGCAGACCACCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------CAGC---------------------------------ACTCTGAGCA---GCA.........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA------CAGC---------------------------------ACTCTGAGC................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGCAA------CAGC---------------------------------ACTCTGAGCA---G...........................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCA---GCAGC------CCC---------------ATTCCGC........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCC-CAA---------------CGAAAACATTGT....................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCA--TTTCC-CAA---------------CGAAAACATTG.....................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................TAGGTTATA------------------------AAGATCTGTTTTAAGTT...............................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.TTGAGTGCCAGTAGCACC---A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TTG---AATATGCAGACCACCAGTGC------------GGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAATATTACTGAACAACAGGTGGC---C............................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CTTG---AATATGCAGACCACCAGTGC------------GG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA------CAGC---------------------------------ACTCTGAGCA---GCAGC------C................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTCAATATTACTGAACAACAGGTGG.................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ATTGAGTGCCAGTAGCGCC---AGCTTG---AATATGCAGGCCACCAGTGC------------GGCAGGTAA---------------------TTAGAAGCAGT-----ATATTGACGTGCCTCTAGATTCAAAACTTAAGCGTATTAAATTGC---TTATGATGCA------GTTTTG-ATATAGCTAAACA-TTTCCTGTCGTTTGACAT----------------------T----------------------------------------TATT---------------------------------------------------------------------------------------------------------GGTTTTTA-----AAAGTTGTTTTTTTT-T---------AAGAAATGATTTAAGTTTA-ATTTTATTTTGGTTTCCA--TTTCC-CAA---------------CGAAAACATTGTACAGATGTTTTTCAATATTACTGAACAACAGGTGGC---CACCAACAA------CAGC---------------------------------ACTCTGAGCA---GCAGC------CGC---------------ATTCCGCCACCAAA-SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................TG---AATATGCAGGCCACCAGTGC------------GG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA------CAGC---------------------------------ACTCTGAGCA---GCAGC------CGC---------------A..............2811.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCAATATTACTGAACAACAGGTGGC---.............................................................................................................2811.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAACAACAGGTGGC---CACC.........................................................................................................2011.0010100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTGAGCA---GCAGC------CGC---------------...............1811.0010000010
droYak3
TTTT---------------------------------------------------------------------------------------------------------ATATAGATGCGTCTCTTGATTCAAAAATTAAGCGAATTAAATTTC---TAATAAAGCA------GTTTTA-ATGTAGCTGAACTGTTTTTT-GCGCTTGTTGT----------------------T----------------------------------------TATT------------------------------------------------------------------------------------------------TATTT-T-TTGTTTTTAGGTTAAA------------------------TAGAAATGTTTTAAGTTTA-ATTTTAATTTGGTTTCCA--TTTCC-CAA---------------CGAAAACATTGTACAGATGTTTTTCAATATTACTGAATAACAGGTGGC---CACCAACAA------CAGC---------------------------------ACTCTGAGCT---GCAGC------CCC---------------ATCCCGCCACCAAC-SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAACAA------CAGC---------------------------------ACTCTGAGC................................................2220.50110000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAGCT---GCAGC------CCC---------------ATCCCGC........2320.50100100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAA------CAGC---------------------------------ACTCTGAGCT---............................................2020.50100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---CACCAACAA------CAGC---------------------------------ACTCTGAGCT---............................................2420.50110000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCT---GCAGC------CCC---------------ATCCCGCCACC....2620.50100100000000
droEug1
TCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------T----------------------------------------TTTC---------------------------------------------------------------------------------------------------------GGATTTTACTTTATA---------------AGCATTCATTT--CATTATTTGAACTAT-TTTTTAATTTCATTTCCA--CTTCT-CAA---------------TGAAAACATTGTAAAGATGTTTTACCATATTTTTGAACGACAGGTGGT---CACCAACAA------CAACAACA---GC------------------AGCAACACTCTGAGCA---GCCGA------ACC---------------ATCCCGCCACCAAA-SizeHit CountTotal NormTotal
No Reads
droBia1
TTTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA--ATCTT----TTTTTCAACCTGCAATATTTTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------TATTATTTGAGTTTA-ATTTTAATTTCATTTTCA--TC-CC-TAA---------------CGAAAACATTGTACAGATGTTTTTCAATATTACTGAACGACAGGTGGA---CACCAACAA------CAGC---------------------------------ACTCCGAGCA---GCAGC------CCC---------------AGCCCGCCGCCAAA-SizeHit CountTotal NormTotal
No Reads
droTak1
TTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------------T----------------------------------------TT-----------------------------------------------------------------------------------------------------------TATCTTTAATTTAAA------------------------TATA---TATTTGAGTTTA-ATTTTGATTTAATTTCCT--TTTCT-CAA---------------TGAAAACATTGTACAGATGTTTTTCAATATTACTGAACGACAGGTGGT---CAACAACAA------CAGC---------------------------------ACTCTGAGCA---GCAGCAGCAGCCCC---------------ATCCCGCCACCAAA-SizeHit CountTotal NormTotal
No Reads
droEle1
GTTGAGTGCAAATAGCACC---GGCTTG---AATGTGCAGGCCACCAATGC------------AGCAGGTAA---------------------TTGGAACCCGT-----------------CTAAAGT----AATCTTAAATGGAATTAATTTC---TTAAAGT------------------------------------------------CCAATAATTCATTCTATAG----TTTTG----AG--------------------ATTTGAGTTTATT------------------------------------------------------------------------------------------------TTATT---------------------------------TTAGTCCTT-----CATAAATTGAGTTTA-ATTTTAATTTAGTTTCCC--TTTCT-CAA---------------TGAAAACATTGTACAGATGTTTTTCAATATTAATAAACGACAGGTGGA---CACCAATAA------CAGC---------------------------------ACTCTGAGCA---GTAGC------CGC---------------ATCCCGTCCGCAAT-SizeHit CountTotal NormTotal
No Reads
droRho1
ATTAAGTGCCG------------GCTTG---AATGTGCAGGCCACGAATGC------------AGCGGGTAA---------------------ATAGAATTTGT---CAA---------------------------------AATATCTCC-TAT-----AAAAAA------GTTTTC-CT-------------------------------------TTAATTTTGTGA----TTTCAAAAACCTTTCAAT---A----TTA-----AGAGACTATTAAATTATTTCTCTTGAATTCAACTTTTCTACTTTTAAAGATTTTTGTTAATACTTCTTAAACAATATTAAAGTCTGTG-------CTAACACGGCCTAATTTTACTG------------------------------------TTT--CACATTTTGAGTTAC-ATTTTAATTTAGTTTCCA--TTTCT-CCA---------------TGAAAACATTGAATAGATGTTTTTCAATATTACTAAACTACAGGTGGT---CACCAACAA------CAGC---------------------------------ATTCTGAGCA---GCAAC------CGC---------------ATCCCGCCAGCAAA-SizeHit CountTotal NormTotal
No Reads
droFic1
TTA--------------T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGC-----------------T---TAATAACTTGT------------------------------------------------------------------------------------------------------------------------------------------------------------TA--TACATTTTGAGTTAA-ATTTTAATTTAGTTTCCA--TTTCT-CAA---------------TGAAAACATTGTACAGATGTTTTTCAATATTACTAAACGGCAGGTGGTGGTCACCAACAA------CAGC---------------------------------ACTCTGAGCA---ACAGC------CCC---------------ATCCCGCCAGCAAA-SizeHit CountTotal NormTotal
No Reads
droKik1
ACTGAGCGCCAGTAGCACT---GGACTTAACAATGTGCAGGCCGGCAATGCTCCGCCCAATGGAACAGGTAAACAAGCAAGATGCTAAATTACTTGGAAGGGGCTTCT---------------------------------------------------------------------------------------------------------------------------TAGT----------------------------TTTCTTT----------------------------------------------------------------------------------------------------------CAC------GTTCT----------------------TG-GT------TA--CCTTCTTCAATTTGCATTTTTAATTTAGTTTCGA--TTTCC-CAA---------------TGAAAACATTTT-TAGATGTTTTTCAATATTACTAAACGGCAGGTGCA---CACCAGCAA------C------------------------------------ACTCGGAGC------AGC------CGC---------------ATTCCTTTTGCAAA-SizeHit CountTotal NormTotal
No Reads
droAna3
TCTAAGTAGCGG------T---GGCCTA---AGTGCCCAGGCAACCAATGCACCACCCACCACAGCAGGTAC---------------------TTTCCTCCAGTCTGATCTATTGA---------------------------GATTTTTTT-TCT--------------------------------------------------------TTGAGAAAAAAGTTTATAA----G----------------------------------------------------------------------------------ATTTCTGTTAA-----------------------CTGTGAAATCCACT---------TAAAA---------------------------------T---------AAGTTCTACTTTTATTTGC-TTTTTAATTTAGTTTCAA--TTTCC-TAA---------------TGAAAACATTGTAAAGATGTTTTTCAATATTACTAAACTACAGGTGCG---CACCAATCA------CACCCA---------------------------C---ATGCCGAGCAACAAAAGT------CAC---------------ATGTTGTGGGAAAA-SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCA------CACCCA---------------------------C---ATGCCGAGCAAC.............................................2511.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCG---CACCAATCA------CACCCA---------------------------C---A........................................................2011.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCA------CACCCA---------------------------C---ATGCCGAGCAACAAAA.........................................2711.001000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTACTTTTATTTGC-TT..........................................................................................................................................................................................................1911.001010000
droBip1
A---AGTCTAAGTAGCGGA---GGCCTA---AGTGCGCAGGCAAACAATGCAACACCCACCGCAGCAGGTAT---------------------AT------------AT------------CTGTAG------------------------------------AGATTTGGTTCCTTTG-ATAAAACAAA---------------------------------GTT--------------------------CCTACAAA------------GTTTG---------------------------------------------------------------------------------------CT---------TAAAG---------------------------------T---------TAGTCCTACTTTTATTTGC-TTTTTAATTTAGTTTCAA--TTTCT-TAA---------------TGAAAACATTGTAAAGATGTTTTTCAATATTACTAAATCACAGGTGCC---CACCAACAA------CACTCG---------------------------GAGCACCA---------AAAGT------CGC---------------ATGCTGCGGGAAAATSizeHit CountTotal NormTotal
No Reads
dp5
GCTGAGCGCCAACAGT------------------GCACACACCACAAACGCGACACCGAATGCGGCAGGTAA---------------------TTGGAGGGCGCTCTGCA---------------------------------AATATCTTC-TAC--------------------------------------------------------CCAAGAACTAAATCTGTAA----TTTCC----CCTTTCAAT---GAATATCTTTCTTTGAC---------------------------------------------------------------------------------------------------------TT-T-CTGTTCG----------------------TGCGCTACCCCTT--C--AATTCGATTTGT-TTGTTAATTTAGTTTCCA--TTTCT-CAA---------------TGAAAACATTGTTAAGATGTTTTTCAATATTACTAAACGGCAGGTGTA---AAGGAGCAG------CAGCAG---------------------------CAGGACTT---------GGAGC------AGC---------------ATTCTCAGGGCAAA-SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG---------------------------CAGGACTT---------GGAGC------AGC---------------...............2011.0010010000000
............................................CAAACGCGACACCGAATGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGCAG------CAGCAG---------------------------CAGG.........................................................18200.0510010000000
droPer2
GCTGAGCGCCAACAGT------------------GCACACACCACAAACGCGACACCGAATGCGGCAGGTAA---------------------TTGGAGGGCGCTCTGCA---------------------------------AATATCTTC-TAC--------------------------------------------------------CCAAGAACTAAATCTGTAA----TTTCC----CCTTTCAAT---GAATATCTTTCTTTGAC---------------------------------------------------------------------------------------------------------TT-T-CTGTTCG----------------------TGCGCTACCCCTT--C--AATTCGATTTGT-TTGTTAATTTAGTTTCCA--TTTCT-CAA---------------TGAAAACATTGTTAAGATGTTTTTCAATATTACTAAACGGCAGGTGTA---AAGGAGCAG------CAGCAG---------------------------CAGGACTT---------GGAGC------AGC---------------ATTCTCAGGGCAAA-SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG------CAGCAG---------------------------CAGGACTT---------GGAGC------AGC---------------...............2711.001100000
droWil2
GTTGAGTATTGGTAGTGGTGCCAGC------------CAAACAACTAACAATGCAAATAATCATGCAGGTAA---------------------TATAAAATA-------------------------------------------------------------------------------TATA--------------------------------------ATT--------------------------AAAACATT------------ATT--------------------------------------------------------------------------------TG-------TTAACATGCTTTTATATTTTGGTTTTT--------------------------------------AATTTTGTGT-----TT-----TTTTTTTCTT--TTTCTTTTAAAAAATATAATTCTTCCGAATCGTTTTAAAGATGTTCTTCAATATTACTAAAC---AGGTATG---CAGG---CCGAGCAACAGCAACAACAAC------------------------AACAACATCA---TCAGC------AAT---------------ATCTTAGCAATAAA-SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAC---AGGTATG---CAGG---CCGA..................................................................................................1911.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATG---CAGG---CCGAGCAACAGC..........................................................................................1911.00100010
droVir3
TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAATTTGAATTTCCTTTTTCTATTG---------------TGAAAACATTGTATAGATGTTTTTCCGTATTACTATACGACAGGTATG---CACCAGCAA------CATCAACA---GC------------AGCAACAACAACTTGCGGAGCA---ACAACAACAGCAG---------CAGGTGAATCATCTTAACAAA-SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACTTGCGGAGCA---AC..........................................2111.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACTATACGACAGGTAT.................................................................................................................1911.001000000000000000000000000000000001000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAG---------CAGGTGAATCATCTTAACA...2711.001000000000000001000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA---ACAACAACAGCAG---------CAGGT.................2230.331001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAA------CATCAACA---GC------------AGCAACA..............................................................21100.101001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAA------CATCAACA---GC------------AGCAAC...............................................................20110.091000000000000000010000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCA---ACAACAACAGCAG---------C.....................19130.081001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA---GC------------AGCAACAACAACT........................................................19200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAA------CATCAACA---GC------------AGCA.................................................................20200.051000000000000000000000000000000000001000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---ACAACAACAGCAG---------CAGG..................18200.051000000000000000000000000000000000000000000000000000000000001000
droMoj3
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTGAATTCCCCTTTTCTATTC---------------TGAAAACATTGTATAGATGTTTTTTCGTATTATTATGCGACAGGTATG---CACCAGCCACACTAATAGAAACAACAAAGGCAACATCAACAGCAACAACGACGCTCGGAGCA---GCAACTACAACAA---------CAATAG-AAACAGCAACCACA-SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTATTATGCGACAGGT...................................................................................................................1911.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACGACGCTCGGAGCA---GC..........................................2111.001000001
droGri2
T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATTTGATTTCTT--TTTCTATTA---------------CGAAAACATTGTACAGATGTTTTTCCGTATTACTATACAACAGGTATG---CACCAGCAA------CATCAAC------------------------AACAACTCGCTGAGCA---ACAACAACAGCAGTGTCTGCAACAGGTGAATCATCTTAACAAA-SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAAC------------------------AACAACTCGCTG...................................................1911.00110
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGCTGAGCA---ACAACAAC....................................1911.00110

Generated: 05/18/2015 at 11:56 AM