ID:

dsi_20310

 Coordinate:

2r:2973821-2973970 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-30.5 -30.5 -30.5

Flybase annnotation

CDS [2r_2973971_2974250_-]; exon [2r_2973971_2974250_-]; intron [2r_2973478_2973970_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AAGCGCCAGCAGCTAAACGAGTTTTTCGTGGCCCACAAGGATGAGGAATGGTTAGTAGCTGACCAAAAGTGGATCAACGACGGTTTTGTTGATATCTCTGCTTGTGCAGGCGCATTGCGTTATTTGCCGTTCTTCTGCTCGCCACTCATAACTTTCTATGTATTAAGTTTTTCTCTGCAGCTTTTTGGGTTTGTGAGATAAAGACTTCTCTGAGAGGTTCTGCGCCATAGCAGAGCTGTTAACTGAATAC
**************************************************((.(((((..(((((....)))((((((((.....))))))))....((((....))))((((...))))..........))..))))).))..((((((((((....((((...((.....)).)))).......))).)))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M053
female body
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
...................................CAAGGATGAGGAATG........................................................................................................................................................................................................ 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGCGCCATAGCAGAGCTGTTAACTGAA... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................GGTTTGTGAGATAAAGACTTCTCTGA..................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................TTTTCTCTGCAGCTTTTTGGGTTTGTGA...................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0
......................................................................................................................GTTATGTGCCGTTCTTTGGCTC.............................................................................................................. 22 3 2 0.50 1 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................................GAAAGGTTTTGCGCCATA..................... 18 2 7 0.43 3 0 3 0 0 0 0 0 0 0
..........................................................................................................................................................................................AGGTTTGTGAGATAAAGC.............................................. 18 2 3 0.33 1 0 1 0 0 0 0 0 0 0
...................................CAAGGATTAGAAATGGTT..................................................................................................................................................................................................... 18 2 7 0.29 2 0 2 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACTTCTCTGAGATGTT............................... 16 1 6 0.17 1 0 1 0 0 0 0 0 0 0
...................................................................AGTAGAGCAACAACGGTTT.................................................................................................................................................................... 19 3 20 0.10 2 0 0 0 0 0 0 2 0 0
.............................................................................................................................................................................................................TTCTCTGAGATGTTC.............................. 15 1 10 0.10 1 1 0 0 0 0 0 0 0 0
.................................CACAAGGATGAGGTA.......................................................................................................................................................................................................... 15 1 11 0.09 1 0 0 0 0 0 0 0 1 0
.........................................GGAGGAAAGGTTAGTA................................................................................................................................................................................................. 16 2 20 0.05 1 0 0 0 0 0 1 0 0 0
.........................................TAAGGCATGGTTAGTA................................................................................................................................................................................................. 16 2 20 0.05 1 0 0 0 0 0 1 0 0 0
..................................................................................GCTTTGTTGATCTCTCTGTT.................................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

TTCGCGGTCGTCGATTTGCTCAAAAAGCACCGGGTGTTCCTACTCCTTACCAATCATCGACTGGTTTTCACCTAGTTGCTGCCAAAACAACTATAGAGACGAACACGTCCGCGTAACGCAATAAACGGCAAGAAGACGAGCGGTGAGTATTGAAAGATACATAATTCAAAAAGAGACGTCGAAAAACCCAAACACTCTATTTCTGAAGAGACTCTCCAAGACGCGGTATCGTCTCGACAATTGACTTATG
**************************************************((.(((((..(((((....)))((((((((.....))))))))....((((....))))((((...))))..........))..))))).))..((((((((((....((((...((.....)).)))).......))).)))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
...........................................................................................................................AACGGCAAGAAGACGAGCGGTGAGTAT.................................................................................................... 27 0 1 1.00 1 1 0 0
...........................................................................................................................AACGGCAAGAAGACGAGCGGTGAGTATT................................................................................................... 28 0 1 1.00 1 1 0 0
.................................................................................................................................AAGAAGACGAGCGGTGAGTATTGAAAGAT............................................................................................ 29 0 1 1.00 1 1 0 0
....CGGTCGTCGATTTGC....................................................................................................................................................................................................................................... 15 0 3 0.67 2 0 2 0
..................................................................................................................................................................................................................ACTTTCCAAAACGCGGTA...................... 18 2 9 0.56 5 0 0 5
...............................................................................................................................GCAAGAAGAAGAGCGGAAAGT...................................................................................................... 21 3 9 0.11 1 1 0 0
..................................................................................................................................................................................................................GCTCTCCAAAACGCGGTAA..................... 19 3 19 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:2973771-2974020 - dsi_20310 AAGCGCCAGCAGCTAAACGAGTTTTTCGTGGCCCACAAGGATGAGGAATGGTTAGTAG-------------CTGACCAA--------------------AA---G-TGGA------T---------------------------------------------------------------CA---AC-----GACGGTTTTGTTGAT--ATCTCT-----------------------GCTTGTGCAG-----GCGCATTGCGTTATT-----------------------TG--CC------------------------------------GTT---------CTTCTGCTCG-----------------CCACTCATAACT-TTC-TATGT-------ATTAAGTTTTTCTCTGCAGCTTTTTG---GGTTTGT---------------GA--GAT--AA------------------AGA--------------------------CTTCTCTG----------------AGAGGTTCTGCGCCA-T--AGCAG------AGCTGTTAACTGA----------ATA--C------------
droSec2 scaffold_26:617212-617461 - AAGCGCCAGCAGCTAAACGAGTTTTTCGTGGCCCACAAGGATGAGGAATGGTTAGTAG-------------CTGACCAA--------------------AA---G-TGGA------T---------------------------------------------------------------CA---AC-----GACGGTTTTGTTGAT--ATCTCT-----------------------GCTTGTGCAG-----GCGCATTGCGTTATT-----------------------TG--CC------------------------------------GTT---------CTTCTGCTCG-----------------CCACTCATAACT-TTC-TATGT-------ATTAAGTTTTTCTCTGCAGCTTTTTG---GGTTTGT---------------GA--GAT--AA------------------AGA--------------------------CTTCTCTG----------------AGAGGTTCTGCGCCA-T--AGCAG------AGCTGTTAACTGA----------GTA--C------------
dm3 chr2R:1971813-1972062 - AAGCGCCAGCAGCTAAACGAGTTTTTCGTGGCCCACAAGGATGAGGAATGGTTAGTAG-------------CTGGCCAA--------------------AA---G-TGGA------T---------------------------------------------------------------CA---AC-----GACGGTTTTGTTGAT--ATCTCT-----------------------GCTTGTGCCG-----GCGCATTGCGTTATT-----------------------TG--CC------------------------------------GTT---------CTTCTGTTCG-----------------CCACTCATAACT-TTC-TATAT-------ATTAAGTTTTTCCCTGCAGCTTATTG---GGTTTGT---------------GA--GAT--AA------------------AAA--------------------------CTTCTCTG----------------AGAGATTCTGCGCCA-T--AGCAG------AGCTGTTGATTGA----------GTA--T------------
droEre2 scaffold_4929:20357265-20357514 + AAGCGCCAGCAGCTAAACGAGTTTTTCGTGGCCCACAAGGATGAGGAATGGTTAGTAG-------------CTGACCAA--------------------AA---G-TGGA------T---------------------------------------------------------------CA---AC-----GACGGTTTTGTTGAT--ATCTCT-----------------------GCTTGTGCAG-----GCCCATTGCATGATT-----------------------TG--CC------------------------------------GTT---------CTTCTGTTCG-----------------CCACTCATAACT-TTC-TATAT-------ATTAAGTTTTTCTCTGCAGCTTATTG---GGTTTGT---------------GA--GAT--AG------------------AGA--------------------------CTTCTCTG----------------AGAGGCTCTGCGCCA-T--AGCAG------AGCTATTAACTGA----------GTA--A------------
droYak3 2L:20512872-20513120 + AAGCGCCAGCAACTAAACGAGTTTTTCGTGGCCCACAAGGATGAGGAATGGTTAGTAG-------------CTGATCAA--------------------AA---G-TGGA------T---------------------------------------------------------------CT---AC-----GACGGTTTTGTTGAT--ATCTCT-----------------------GCTTGTGCAG-----GCCCATTGCATTATT-----------------------TG--CC------------------------------------GTT---------CTTCTGTTCG-----------------CCACTCATAACT-CTC-TATAT-------ATTAAGTTTTTCTCTGCAGCTTATTG---GGTTTGT---------------GA--GAT--AG------------------AGA--------------------------CTTCTCTG----------------AGAGGTTCTGCGCCA-T--AGCAGTAAAAAA-------ACTGA----------GTA--A------------
droEug1 scf7180000409551:384750-385003 - AAACGCCAGCAGCTAAACGAGTTCTTTGTGGCTCACAAGGACGAGGAATGGTTAGTAG-------------CTGACCAG--------------------AG---G-TGCA------T---------------------------------------------------------------CC---GC-----AACAGTTTGGTTGAT--ACGGAT-----------------------GCCTCAGCAG-----GTCCCTTGCGTTTTT-----------------------TG--TT----------------------------------CTGTT---------CTTCTGTGCG-----------------CCACTCATAACT-TTC-TGTAT----------AAGTTTTTCTCTGCAGCTTATTG---GGTTTGT---------------GA--GAC--AG------------------AGA--------------------------CTTCTCTG----------------AGAATTTTTGCGTCA-TCTCGCAG------AGCTGCTAACTGATATCTAC---------------------
droBia1 scf7180000301470:13120-13371 + AAGCGCCAGCAGCTAAATGAATTCTTTGTGGCCCACAAGGACGAGGAATGGTTAGTAG-------------CTGACCAG--------------------CG---G-TTCA------T---------------------------------------------------------------CA---AC-----TACGGTTTTGTTTAT--GTCTCT-----------------------GCCTCTGCAA-----GCCCCTTGCGTTATT-----------------------TG-----------------------------------------------------TCCTGTTCG-----------------ACACTCATAACA-TTC-TGTAT-------ATTAAGTTTTTCTCTGCAGCTTATTG---GTTTTGT---------------GA--GAC--AG------------------AGA--------------------------CTTCTCTG----------------AGAGGTTGTGCGCCA-TCTCGCAG------AGCTGCTAACTGATATTTGCCA------A------------
droTak1 scf7180000415401:577078-577356 - AAGCGGCAGCAGCTGAACGAGTTCTTCGTGGCCCACAAGGACGAGGAATGGTTAGTAG-------------CTGACCTT--------------------CAGCGG-GGCA------T---------------------------------------------------------------CC---ATATCAATACGGTTCCGTTGAT--ATCTCC-----------------------GCCTCTGCAG-----GCCCCTTGCGTTATT-----------------------TG--CCCAG-------------------------AT-CTC---CT---------GTCCTGTTCG-----------------CCACTCATAACT-TTT-TGTAT-------ATTAAGTTTTTCTCTGCAGCTTATTG---GGTTTGT---------------GA--GAC--AG------------------AGA--------------------------CTTCTCTG----------------AGAGGTTCTGCGCCA-TTTCGCAG------AGCTGCTAACTGATATCTGCCAAATTGTT------------
droEle1 scf7180000490999:11340-11633 - AAGCGGCAGCAGCTAAACGAGTTCTTCGTGGCCCACAAGGACGAGGAATGGTTAGTAG-------------CTGACCAG--------------------AG---GGTGCA------T--------------------------CTACGTCTA-------CTACTACTACT-----------------ACTACTACGGTCTTGTTGAT--ATCTCT-----------------------GCCTGTGCAG------CCCCTTGCGTTTTT-----------------------TA------G-----------------------------ACCTGTTCCTGAGCCCCTCCTGTTCG-----------------CCACTCATAACA-TTC-TGTAT-------ATTAAGTTTTTCTCTGCAGCTTATTG---AGTTTGT---------------GACAGAC--AG------------------AGA--------------------------CTTCTCTG----------------AGAGGTTCTGCGCCA-TGTCGCAG------AGCTGCT----GATATCTACTAAATT--C-----------A
droRho1 scf7180000780073:11635-11900 - AAGCGACAGCAGCTAAACGAGTTCTTTGTGGCCCACAAGGACGAGGAATGGTTAGTAG-------------CTGACCAG--------------------AG---GTTGCA------C---------------------------------------------------------------CC---AC-----TACGGTTTCGTTGAT--ATCTCT-----------------------GCCTGTGCAG------CCCCTTGCGTCTTT-----------------------TG--CC---------------------------ATG-TGCCTG-T---------CTCCTGTTCG-----------------CCACTCATAACT-TTC-TGTAT-------ATTAAGTTTTTCTCTGCAGCTTATTG---GGTTTAT---------------GA--GAC--AG------------------AGA--------------------------CATCTCTG----------------AGAGGTTCTGCGCCA-TGTCGCAG------AGCTGCT----GATATCTACTAAATT--C-----------A
droFic1 scf7180000452050:47525-47793 - AAGCGGCAGCAACTTAACGAGTTTTTCGTGGCCCACAAGGACGAGGAATGGTTAGTAC-------------CTGACCAG--------------------CG---GGTGCA------T---------------------------------------------------------------CC---AT-----TACGGTTACGTTGAT--ATGTCT-----------------------GCCTATGCAG-----TCCCCTTGCGTTATT-----------------------TG--CC----------------------------------CTATT------CTTCTCCTGTTCG-----------------CCACTCATAACCATTC-TGTAT-------ATTAAGTTTTTCTCTGCAGCTTATTG---GGTTTGT---------------GA--GAC--AG------------------AGA--------------------------CTTCTCTG----------------AGAGGTTCTGCGCCA-TCTCGCAG------AGCTGCTAACTGATATCTACCAAACT--A------------
droKik1 scf7180000302817:235325-235622 + AAGCGCCAACAGTTGAACGAGTTTTTCGTGGCCCATAAGGACGAGGAATGGTTAGTAG-------------CTGGCCAA--------------------CC---G------------------------------GTGAGCC--TCCGATGC-------GAAGCAGTGCA---------CCC---TC-----TTCGATCTCGTTGAT--ATCTCA-----------------------GCCTGAGCAACTTGGCTCCCTTGCGTGGTTCCCC-----------ATTTGCCTTG--CC------------------------------------ATT---------TGCCTGCTCG-----------------GAACTCATAACT-TTC-TGTAT-------ATTAAGTTTTTCTCTGCAGCTTATTG---GGTTTGT---------------GA--GAC--AGAGACAG------------AGA--------------------------CTTCTCTG----------------GAAGCGACTGCACGG-TCTCGCAG------AGCTGCTAACTGATATCC-----------------------
droAna3 scaffold_13266:18818866-18819141 + AAGAGGCAGCAATTGAACGAGTTCTTTGTGGCCCACAAGGATGAGGAATGGTTAGTAT-------------CAAGGACA-----------------------------------------------------GCAGCGCGCTTCTACGATGC-------GACA-----GGTTCT------CT---AC-----TACCGTT---------------------------------------ATCTGTCCAT------CTTTCTGCGTTGAA-----------------------TCTGCC---------------------------GTT-TGC------------CTCTCCAGTTTA-----------------AAACTCATAACT-TTC-TGTGT-------ATTAAGTTTTTCTCTGCAGCTTATTG---GGTTTGT---------------GA--GGC--AG------------------AGA--------------------------CTTATCTG----------------AGAGCGTCTGCGCCA-TTTCGCAG------AGCTGCTAAATGATATCCACTAAATT--T------------
droBip1 scf7180000396417:39217-39491 - AAGAGGCAGCAGCTGAACGAATTTTTTGTTGCCCACAAGGACGAGGAATGGTTAGTAT-------------CAAGGCCA-----------------------------------------------------CCAGCACGCCTCTACGAT-----------------------------------GC-----GACGGGTTCTCTATT--A---CTGCC--------------------ATCTGGGCAT------CTTTCTGCGTTGAA-----------------------TCTCCC------------------------------------GTT-----GCCTCTCCAGTTTA-----------------AAACTCATAACT-TTC-TGTGT-------ATTAAGTTTTTCTCTGCAGCTTATTG---GGTTTGT---------------GA--AGC--AG------------------GGA--------------------------CTTATCTG----------------AGAGCGTCTGCGCCA-TTTCGCAG------AGCTGCTAAATGATATCCACTAAATT--T------------
dp5 3:18999531-18999893 + AAGCGCCAGCAGCTGAACGAGTTCTTTGTTGCCCACAAGGACGAGGAATGGTTAGTAT-------------CTAGCCCACTGCC-TGGACTTCTGCGACGA---G-TGAGCGC---CCAACGGCGATG-----------------------CCAATGCTGATGCAGTGCA---------CTCTCCTT-----T-TCATTTGGTTGATCTATTTCTACCATCCCCATCTATACCCACCCACCTATGCAA------TCCCTTGCGTTGTT-----------------------TCTCTT---------------------------ATT-TGCCTGTT---------TCCTTGTGCG---CCACGCCACTC----AAATCATAACT-GTT-TGTAT----ATTATTAAGTTTTTCTCTGCAGCTTATTG---GGTTTGT---------------GA--GAC--AG------------------AGT--------------------------CCTATCTG----------------AGAGCATCTGCGCCGCTTTTGCAG------AGCTGCTGTCTGATATC-ACTG-ATA--T------------
droPer2 scaffold_242:31488-31850 + AAGCGCCAGCAGCTGAACGAGTTCTTTGTTGCCCACAAGGACGAGGAATGGTTAGTAT-------------CTAGCCCACTGCC-TGGACTTCTGCGACGA---G-TGAGCAC---CCAACGGCGATG-----------------------CCAATGCTGATGCAGTGCA---------CTCTCCTT-----T-TCATTTGGTTGATCTATTTCTACCATCCCCATCTATACCCACCCACCTATGCAA------TCCCTTGCGTTGTT-----------------------TCTCTT---------------------------ATT-TGCCTGTT---------TCCTTGTGCG---CCACGCCACTC----ACATCATAACT-GTT-TGTAT----ATTATTAAGTTTTTCTCTGCAGCTTATTG---CGTTTGT---------------GA--GAC--AG------------------AGT--------------------------CCTATCTG----------------AGAGCATCTGCGCCGCTATTGCAG------AGCTGCTGTCTGATATC-ACTG-ATA--T------------
droWil2 scf2_1100000004513:6025748-6026099 + AAACGTCAGCAGCTCAATGAGTTCTTTGTGGCTCACAAGGATGAGGAATGGTTAGTAA-------------TTGCCATAAAGCCATCGACCACAACCACCA---C-CA-GCAC---C----------------------------ACGACTA-------CAACAACTACA-----------------ACAAAT---------------------------------------------------ACAA-----CTCCTTTTTATAATTCTCATGATGATGATGATC-----TA--CT------------------------------------TTT---------CC----TTCACAATGACATCAAA----ACGATCATAATT-CTT-TTTGT-------ATTAAGTTTTTCTCTGCAGCTTTTTAAA-AAATACG---------------GA--GACACAGAAA--GAGGGAGAGAGCGAGACTCTCTGCTCCTTCCCCCCTCTCTCCCTTCTCTGCATCTGCTGAAAAAAAAGAGATTTTCA-----------------------GTTAATTGA----------AAA--TGAAAATACTTAA
droVir3 scaffold_12875:4658750-4658808 - AAGCGACAGCAGCTAAACGAGTTCTTTGTGGCGCACAAGGATGAGGAATGGTGAGTAG-------------C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6496:25407398-25407776 + AAAAGACAGCAGCTAAACGAGTTCTTTGTGGCGCACAAGGACGAGGAATGGTGAGTAAGAATGGGTCTTCCCTAACCAA--------------------AA---A-CTGA-AAATGACAACAGCAAAGGCCAGACGCACACTTTAAA------------------GTGGCTTCTCGACATCC---AT-----T-GCATTTCAC------------------------------------TGCGAACAATTTATATTT--------AT-------------------------G--TGTACACTTTTTATTTTATTCTTTATTTAATTATAATTATTT------C-TCTCAGTGCG-----ACTGCATTCATAAAATTCATAACC-CTCTTGTATACTTATTATTAAGTTTTTCTCTGCAGCTATTTATGGGTTTTATGGCGTTTTGCGATCTGA--GACTCAGAGAC-G------------AGA-----------------------------CACTG----------------ATACAGCCTCTGTCT-C--AGTAG------AA------ACTGA----------AA---G--AATAACTTAA
droGri2 scaffold_15245:317941-318005 + AAGCGGCAGCAGCTGAACGAGTTCTTTGTGGCGCACAAGGACGAGGAATGGTGAGTAG-------------CAAACCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AAGCGCCAGCAGCTAAACGAGTTTTTCGTGGCCCACAAGGATGAGGAATGGTTAGTAG-------------CTGACCAA--------------------AA---G-TGGA------T---------------------------------------------------------------CA---AC-----GACGGTTTTGTTGAT--ATCTCT-----------------------GCTTGTGCAG-----GCGCATTGCGTTATT-----------------------TG--CC------------------------------------GTT---------CTTCTGCTCG-----------------CCACTCATAACT-TTC-TATGT-------ATTAAGTTTTTCTCTGCAGCTTTTTG---GGTTTGT---------------GA--GAT--AA------------------AGA--------------------------CTTCTCTG----------------AGAGGTTCTGCGCCA-T--AGCAG------AGCTGTTAACTGA----------ATA--C------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................CAAGGATGAGGAATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1511.00100000010000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCCA-T--AGCAG------AGCTGTTAACTGA----------A.................2711.00100000010000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTGT---------------GA--GAT--AA------------------AGA--------------------------CTTCTCTG----------------A......................................................................2611.00100000001000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCTCTGCAGCTTTTTG---GGTTTGT---------------GA--.....................................................................................................................................................2811.00100010000000000000
droSec2
AAGCGCCAGCAGCTAAACGAGTTTTTCGTGGCCCACAAGGATGAGGAATGGTTAGTAG-------------CTGACCAA--------------------AA---G-TGGA------T---------------------------------------------------------------CA---AC-----GACGGTTTTGTTGAT--ATCTCT-----------------------GCTTGTGCAG-----GCGCATTGCGTTATT-----------------------TG--CC------------------------------------GTT---------CTTCTGCTCG-----------------CCACTCATAACT-TTC-TATGT-------ATTAAGTTTTTCTCTGCAGCTTTTTG---GGTTTGT---------------GA--GAT--AA------------------AGA--------------------------CTTCTCTG----------------AGAGGTTCTGCGCCA-T--AGCAG------AGCTGTTAACTGA----------GTA--C------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCCA-T--AGCAG------AGCTGTTAACTG.............................2411.0010010
....................GTTTTTCGTGGCCCACAAGGATGAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
.............................GGCCCACAAGGATGAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
.........................................................................................................................................................................................................................................................................................................................................................CTTCTGCTCG-----------------CCACTCATAAC..............................................................................................................................................................................................................................2111.0011000
......CAGCAGCTAAACGAGTTTTTCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
dm3
AAGCGCCAGCAGCTAAACGAGTTTTTCGTGGCCCACAAGGATGAGGAATGGTTAGTAG-------------CTGGCCAA--------------------AA---G-TGGA------T---------------------------------------------------------------CA---AC-----GACGGTTTTGTTGAT--ATCTCT-----------------------GCTTGTGCCG-----GCGCATTGCGTTATT-----------------------TG--CC------------------------------------GTT---------CTTCTGTTCG-----------------CCACTCATAACT-TTC-TATAT-------ATTAAGTTTTTCCCTGCAGCTTATTG---GGTTTGT---------------GA--GAT--AA------------------AAA--------------------------CTTCTCTG----------------AGAGATTCTGCGCCA-T--AGCAG------AGCTGTTGATTGA----------GTA--T------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................ACAAGGATGAGGAATGGTTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................CGTGGCCCACAAGGATGAGGAATGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................GACGGTTTTGTTGAT--ATCTCT-----------------------GCTTG..........................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CCCACAAGGATGAGGAATGGTTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCCA-T--AGCAG------AGCTGTT..................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTG----------------AGAGATTCTGCGCCA-T--AGCAG------A........................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GCCCACAAGGATGAGGAATGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
...........................GTGGCCCACAAGGATGAGGAATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTG----------------AGAGATTCTGCGCCA-T--AGCAG------.........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--AGCAG------AGCTGTTGATTG.............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCA-T--AGCAG------AGCTGTTGATT..............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG------AGCTGTTGATTGA----------GTA--.............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCTTATTG---GGTTTGT---------------GA--GA...................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................ACGAGTTTTTCGTGGCCCAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................ATCTCT-----------------------GCTTGTGCCG-----GCGCATTGCGT.....................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-T--AGCAG------AGCTGTTGATTGA----------GT................2311.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GAGTTTTTCGTGGCCCACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...................AGTTTTTCGTGGCCCACAAGGATGAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
................................CCACAAGGATGAGGAATGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG------AGCTGTTGATTGA----------G.................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
................................................................................................................................................................................................................................................TTGTGCCG-----GCGCATTGCGT.....................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................GCGTTATT-----------------------TG--CC------------------------------------GTT---------CTTC................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TTG---GGTTTGT---------------GA--GAT--AA------------------AAA--------------------------CTTC...........................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CCCACAAGGATGAGGAATGGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGATTCTGCGCCA-T--AGCAG------AGCATC...................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCTGCGCCA-T--AGCAG------AGCTGTTGA................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................ATGAGGAATGGTTAGTAG-------------C.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCA-T--AGCAG------AGCTGTTGATTGA----------G.................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCGCCA-T--AGCAG------AGCTGTTGAT...............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCCA-T--AGCAG------AGCTGTTGATTGA----------G.................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TATTG---GGTTTGT---------------GA--GAT--AA------------------AAA--------------------------...............................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTG----------------AGAGATTCTGCGCCA-T--AGCAG------A........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG----------------AGAGATTCTGCGCCA-T--AGCAG------AG.......................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................AAGGATGAGGAATGGTTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TAGTAG-------------CTGGCCAA--------------------AA---G-TGGA------T---------------------------------------------------------------CA---AC-----GAC..........................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCCA-T--AGCAG------AGCTGTTGATTG.............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CGTGGCCCACAAGGATGAGGAATGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GCTAAACGAGTTTTTCGTGGCCCACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG------AGCTGTTGATTGA----------GTA--T------------2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TTTTTCGTGGCCCACAAGGATGAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCTGCAGCTTATTG---GGTTTGT---------------G........................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TCGTGGCCCACAAGGATGAGGAATGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GTGGCCCACAAGGATGAGGAATGGTTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................AGTAG-------------CTGGCCAA--------------------AA---G-TGGA------T---------------------------------------------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCTTATTG---GGTTTGT---------------GA--.....................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GAGTTTTTCGTGGCCCACAAGGATGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................GACGGTTTTGTTGAT--ATCTCT-----------------------...............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG------AGCTGTTGATTGA----------G.................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCA-T--AGCAG------AGCTGTTGATTGA----------..................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TGT---------------GA--GAT--AA------------------AAA--------------------------CTTCTCTG----------------AGAGAT.................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTCTG----------------AGAGATTCTGCGCCA-T--AGC.................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................CTTATTG---GGTTTGT---------------GA--GA...................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CCCACAAGGATGAGGAATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG----------------AGAGATTCTGCGCCA-T--AGC.................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................ACAAGGATGAGGAATGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
................................CCACAAGGATGAGGAATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..................................ACAAGGATGAGGAATGGTTCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................AGGATGAGGAATGGTTTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1860.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
droEre2
AAGCGCCAGCAGCTAAACGAGTTTTTCGTGGCCCACAAGGATGAGGAATGGTTAGTAG-------------CTGACCAA--------------------AA---G-TGGA------T---------------------------------------------------------------CA---AC-----GACGGTTTTGTTGAT--ATCTCT-----------------------GCTTGTGCAG-----GCCCATTGCATGATT-----------------------TG--CC------------------------------------GTT---------CTTCTGTTCG-----------------CCACTCATAACT-TTC-TATAT-------ATTAAGTTTTTCTCTGCAGCTTATTG---GGTTTGT---------------GA--GAT--AG------------------AGA--------------------------CTTCTCTG----------------AGAGGCTCTGCGCCA-T--AGCAG------AGCTATTAACTGA----------GTA--A------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................GTGGCCCACAAGGATGAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GT---------------GA--GAT--AG------------------AGA--------------------------CTTCTCTG----------------AGAGGCT................................................................2711.0010100000
......................TTTTCGTGGCCCACAAGGATGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
......................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTTCTCTGCAGCTTATTG---GGTTT..........................................................................................................................................................................2611.0010000010
.....................................................AGTAG-------------CTGACCAA--------------------AA---G-TGGA------T---------------------------------------------------------------CA---AC-----.............................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
..................................ACAAGGATGAGGAATGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100
droYak3
AAGCGCCAGCAACTAAACGAGTTTTTCGTGGCCCACAAGGATGAGGAATGGTTAGTAG-------------CTGATCAA--------------------AA---G-TGGA------T---------------------------------------------------------------CT---AC-----GACGGTTTTGTTGAT--ATCTCT-----------------------GCTTGTGCAG-----GCCCATTGCATTATT-----------------------TG--CC------------------------------------GTT---------CTTCTGTTCG-----------------CCACTCATAACT-CTC-TATAT-------ATTAAGTTTTTCTCTGCAGCTTATTG---GGTTTGT---------------GA--GAT--AG------------------AGA--------------------------CTTCTCTG----------------AGAGGTTCTGCGCCA-T--AGCAGTAAAAAA-------ACTGA----------GTA--A------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........ACTAAACGAGTTTTTCGTGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCTG----------------AGAGGTTCTGCGCCA-T--AGCA................................................2711.00101000000000
......................................................................................................................................................................................................................................................................ATTATT-----------------------TG--CC------------------------------------GTT---------CTTCTGTTCG-----------------CC.......................................................................................................................................................................................................................................2511.00101000000000
droEug1
AAACGCCAGCAGCTAAACGAGTTCTTTGTGGCTCACAAGGACGAGGAATGGTTAGTAG-------------CTGACCAG--------------------AG---G-TGCA------T---------------------------------------------------------------CC---GC-----AACAGTTTGGTTGAT--ACGGAT-----------------------GCCTCAGCAG-----GTCCCTTGCGTTTTT-----------------------TG--TT----------------------------------CTGTT---------CTTCTGTGCG-----------------CCACTCATAACT-TTC-TGTAT----------AAGTTTTTCTCTGCAGCTTATTG---GGTTTGT---------------GA--GAC--AG------------------AGA--------------------------CTTCTCTG----------------AGAATTTTTGCGTCA-TCTCGCAG------AGCTGCTAACTGATATCTAC---------------------SizeHit CountTotal NormTotal
No Reads
droBia1
AAGCGCCAGCAGCTAAATGAATTCTTTGTGGCCCACAAGGACGAGGAATGGTTAGTAG-------------CTGACCAG--------------------CG---G-TTCA------T---------------------------------------------------------------CA---AC-----TACGGTTTTGTTTAT--GTCTCT-----------------------GCCTCTGCAA-----GCCCCTTGCGTTATT-----------------------TG-----------------------------------------------------TCCTGTTCG-----------------ACACTCATAACA-TTC-TGTAT-------ATTAAGTTTTTCTCTGCAGCTTATTG---GTTTTGT---------------GA--GAC--AG------------------AGA--------------------------CTTCTCTG----------------AGAGGTTGTGCGCCA-TCTCGCAG------AGCTGCTAACTGATATTTGCCA------A------------SizeHit CountTotal NormTotal
No Reads
droTak1
AAGCGGCAGCAGCTGAACGAGTTCTTCGTGGCCCACAAGGACGAGGAATGGTTAGTAG-------------CTGACCTT--------------------CAGCGG-GGCA------T---------------------------------------------------------------CC---ATATCAATACGGTTCCGTTGAT--ATCTCC-----------------------GCCTCTGCAG-----GCCCCTTGCGTTATT-----------------------TG--CCCAG-------------------------AT-CTC---CT---------GTCCTGTTCG-----------------CCACTCATAACT-TTT-TGTAT-------ATTAAGTTTTTCTCTGCAGCTTATTG---GGTTTGT---------------GA--GAC--AG------------------AGA--------------------------CTTCTCTG----------------AGAGGTTCTGCGCCA-TTTCGCAG------AGCTGCTAACTGATATCTGCCAAATTGTT------------SizeHit CountTotal NormTotal
No Reads
droEle1
AAGCGGCAGCAGCTAAACGAGTTCTTCGTGGCCCACAAGGACGAGGAATGGTTAGTAG-------------CTGACCAG--------------------AG---GGTGCA------T--------------------------CTACGTCTA-------CTACTACTACT-----------------ACTACTACGGTCTTGTTGAT--ATCTCT-----------------------GCCTGTGCAG------CCCCTTGCGTTTTT-----------------------TA------G-----------------------------ACCTGTTCCTGAGCCCCTCCTGTTCG-----------------CCACTCATAACA-TTC-TGTAT-------ATTAAGTTTTTCTCTGCAGCTTATTG---AGTTTGT---------------GACAGAC--AG------------------AGA--------------------------CTTCTCTG----------------AGAGGTTCTGCGCCA-TGTCGCAG------AGCTGCT----GATATCTACTAAATT--C-----------ASizeHit CountTotal NormTotal
No Reads
droRho1
AAGCGACAGCAGCTAAACGAGTTCTTTGTGGCCCACAAGGACGAGGAATGGTTAGTAG-------------CTGACCAG--------------------AG---GTTGCA------C---------------------------------------------------------------CC---AC-----TACGGTTTCGTTGAT--ATCTCT-----------------------GCCTGTGCAG------CCCCTTGCGTCTTT-----------------------TG--CC---------------------------ATG-TGCCTG-T---------CTCCTGTTCG-----------------CCACTCATAACT-TTC-TGTAT-------ATTAAGTTTTTCTCTGCAGCTTATTG---GGTTTAT---------------GA--GAC--AG------------------AGA--------------------------CATCTCTG----------------AGAGGTTCTGCGCCA-TGTCGCAG------AGCTGCT----GATATCTACTAAATT--C-----------ASizeHit CountTotal NormTotal
No Reads
droFic1
AAGCGGCAGCAACTTAACGAGTTTTTCGTGGCCCACAAGGACGAGGAATGGTTAGTAC-------------CTGACCAG--------------------CG---GGTGCA------T---------------------------------------------------------------CC---AT-----TACGGTTACGTTGAT--ATGTCT-----------------------GCCTATGCAG-----TCCCCTTGCGTTATT-----------------------TG--CC----------------------------------CTATT------CTTCTCCTGTTCG-----------------CCACTCATAACCATTC-TGTAT-------ATTAAGTTTTTCTCTGCAGCTTATTG---GGTTTGT---------------GA--GAC--AG------------------AGA--------------------------CTTCTCTG----------------AGAGGTTCTGCGCCA-TCTCGCAG------AGCTGCTAACTGATATCTACCAAACT--A------------SizeHit CountTotal NormTotal
No Reads
droKik1
AAGCGCCAACAGTTGAACGAGTTTTTCGTGGCCCATAAGGACGAGGAATGGTTAGTAG-------------CTGGCCAA--------------------CC---G------------------------------GTGAGCC--TCCGATGC-------GAAGCAGTGCA---------CCC---TC-----TTCGATCTCGTTGAT--ATCTCA-----------------------GCCTGAGCAACTTGGCTCCCTTGCGTGGTTCCCC-----------ATTTGCCTTG--CC------------------------------------ATT---------TGCCTGCTCG-----------------GAACTCATAACT-TTC-TGTAT-------ATTAAGTTTTTCTCTGCAGCTTATTG---GGTTTGT---------------GA--GAC--AGAGACAG------------AGA--------------------------CTTCTCTG----------------GAAGCGACTGCACGG-TCTCGCAG------AGCTGCTAACTGATATCC-----------------------SizeHit CountTotal NormTotal
No Reads
droAna3
AAGAGGCAGCAATTGAACGAGTTCTTTGTGGCCCACAAGGATGAGGAATGGTTAGTAT-------------CAAGGACA-----------------------------------------------------GCAGCGCGCTTCTACGATGC-------GACA-----GGTTCT------CT---AC-----TACCGTT---------------------------------------ATCTGTCCAT------CTTTCTGCGTTGAA-----------------------TCTGCC---------------------------GTT-TGC------------CTCTCCAGTTTA-----------------AAACTCATAACT-TTC-TGTGT-------ATTAAGTTTTTCTCTGCAGCTTATTG---GGTTTGT---------------GA--GGC--AG------------------AGA--------------------------CTTATCTG----------------AGAGCGTCTGCGCCA-TTTCGCAG------AGCTGCTAAATGATATCCACTAAATT--T------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TGT---------------GA--GGC--AG------------------AGA--------------------------CTTATCTG----------------AGAGC..................................................................2611.001010000
..........................TGTGGCCCACAAGGATGAGGAATGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
.....GCAGCAATTGAACGAGTTCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
droBip1
AAGAGGCAGCAGCTGAACGAATTTTTTGTTGCCCACAAGGACGAGGAATGGTTAGTAT-------------CAAGGCCA-----------------------------------------------------CCAGCACGCCTCTACGAT-----------------------------------GC-----GACGGGTTCTCTATT--A---CTGCC--------------------ATCTGGGCAT------CTTTCTGCGTTGAA-----------------------TCTCCC------------------------------------GTT-----GCCTCTCCAGTTTA-----------------AAACTCATAACT-TTC-TGTGT-------ATTAAGTTTTTCTCTGCAGCTTATTG---GGTTTGT---------------GA--AGC--AG------------------GGA--------------------------CTTATCTG----------------AGAGCGTCTGCGCCA-TTTCGCAG------AGCTGCTAAATGATATCCACTAAATT--T------------SizeHit CountTotal NormTotal
No Reads
dp5
AAGCGCCAGCAGCTGAACGAGTTCTTTGTTGCCCACAAGGACGAGGAATGGTTAGTAT-------------CTAGCCCACTGCC-TGGACTTCTGCGACGA---G-TGAGCGC---CCAACGGCGATG-----------------------CCAATGCTGATGCAGTGCA---------CTCTCCTT-----T-TCATTTGGTTGATCTATTTCTACCATCCCCATCTATACCCACCCACCTATGCAA------TCCCTTGCGTTGTT-----------------------TCTCTT---------------------------ATT-TGCCTGTT---------TCCTTGTGCG---CCACGCCACTC----AAATCATAACT-GTT-TGTAT----ATTATTAAGTTTTTCTCTGCAGCTTATTG---GGTTTGT---------------GA--GAC--AG------------------AGT--------------------------CCTATCTG----------------AGAGCATCTGCGCCGCTTTTGCAG------AGCTGCTGTCTGATATC-ACTG-ATA--T------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................TGTTGCCCACAAGGACGAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..........................TGTTGCCCACAAGGACGAGGAATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
...........................GTTGCCCACAAGGACGAGGAATGGTTCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000100000
.....................................................................................................................................................................................................................CTACCATCCCCATCTATACC....................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..........AGCTGAACGAGTTCTTTGTTGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..............GAACGAGTTCTTTGTTGCCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
droPer2
AAGCGCCAGCAGCTGAACGAGTTCTTTGTTGCCCACAAGGACGAGGAATGGTTAGTAT-------------CTAGCCCACTGCC-TGGACTTCTGCGACGA---G-TGAGCAC---CCAACGGCGATG-----------------------CCAATGCTGATGCAGTGCA---------CTCTCCTT-----T-TCATTTGGTTGATCTATTTCTACCATCCCCATCTATACCCACCCACCTATGCAA------TCCCTTGCGTTGTT-----------------------TCTCTT---------------------------ATT-TGCCTGTT---------TCCTTGTGCG---CCACGCCACTC----ACATCATAACT-GTT-TGTAT----ATTATTAAGTTTTTCTCTGCAGCTTATTG---CGTTTGT---------------GA--GAC--AG------------------AGT--------------------------CCTATCTG----------------AGAGCATCTGCGCCGCTATTGCAG------AGCTGCTGTCTGATATC-ACTG-ATA--T------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------AGCTGCTGTCTGATATC-ACT....................2121.002200000
..................................ACAAGGACGAGGAATGGTTCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501010000
......................................................................................................................................................................................................................................................................GTTGTT-----------------------TCTCTT---------------------------ATT-TGCCC................................................................................................................................................................................................................................................................................2020.501100000
droWil2
AAACGTCAGCAGCTCAATGAGTTCTTTGTGGCTCACAAGGATGAGGAATGGTTAGTAA-------------TTGCCATAAAGCCATCGACCACAACCACCA---C-CA-GCAC---C----------------------------ACGACTA-------CAACAACTACA-----------------ACAAAT---------------------------------------------------ACAA-----CTCCTTTTTATAATTCTCATGATGATGATGATC-----TA--CT------------------------------------TTT---------CC----TTCACAATGACATCAAA----ACGATCATAATT-CTT-TTTGT-------ATTAAGTTTTTCTCTGCAGCTTTTTAAA-AAATACG---------------GA--GACACAGAAA--GAGGGAGAGAGCGAGACTCTCTGCTCCTTCCCCCCTCTCTCCCTTCTCTGCATCTGCTGAAAAAAAAGAGATTTTCA-----------------------GTTAATTGA----------AAA--TGAAAATACTTAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................TGTGGCTCACAAGGATGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTGCAGCTTTTTAAA-AAATACG---------------GA--.....................................................................................................................................................2711.00101000
..........................TGTGGCTCACAAGGATGAGGAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
....GTCAGCAGCTCAATGAGTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.............................GGCTCACAAGGATGAGGAATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
droVir3
AAGCGACAGCAGCTAAACGAGTTCTTTGTGGCGCACAAGGATGAGGAATGGTGAGTAG-------------C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................GTGGCGCACAAGGATGAGGAATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
.......................CTTTGTGGCGCACAAGGATGAGGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000100000000000000000000000000000000000000000000000
...................AGTTCTTTGTGGCGCACAAGGATGAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000100000000000000000000000000000000000000000000000000
.......................CTTTGTGGCGCACAAGGATGAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
................................GCACAAGGATGAGGAATGGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
..........AGCTAAACGAGTTCTTTGTGGCGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
..........................TGTGGCGCACAAGGATGAGGAATGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000010
..........................TGTGGCGCACAAGGATGAGGAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
droMoj3
AAAAGACAGCAGCTAAACGAGTTCTTTGTGGCGCACAAGGACGAGGAATGGTGAGTAAGAATGGGTCTTCCCTAACCAA--------------------AA---A-CTGA-AAATGACAACAGCAAAGGCCAGACGCACACTTTAAA------------------GTGGCTTCTCGACATCC---AT-----T-GCATTTCAC------------------------------------TGCGAACAATTTATATTT--------AT-------------------------G--TGTACACTTTTTATTTTATTCTTTATTTAATTATAATTATTT------C-TCTCAGTGCG-----ACTGCATTCATAAAATTCATAACC-CTCTTGTATACTTATTATTAAGTTTTTCTCTGCAGCTATTTATGGGTTTTATGGCGTTTTGCGATCTGA--GACTCAGAGAC-G------------AGA-----------------------------CACTG----------------ATACAGCCTCTGTCT-C--AGTAG------AA------ACTGA----------AA---G--AATAACTTAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................CTTTGTGGCGCACAAGGACGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCGTTTTGCGATCTGA--G....................................................................................................................................................2011.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTATTTATGGGTTTTATGGC.....................................................................................................................................................................2211.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGA--GACTCAGAGAC-G------------AGA-----------------------------CACTG----------------.......................................................................2411.001100000
...................AGTTCTTTGTGGCGCACAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
droGri2
AAGCGGCAGCAGCTGAACGAGTTCTTTGTGGCGCACAAGGACGAGGAATGGTGAGTAG-------------CAAACCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 08:41 PM