ID:

dsi_2028

 Coordinate:

3l:15129317-15129466 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.8 -18.4 -18.4

Flybase annnotation

CDS [3l_15129467_15129872_+]; exon [3l_15129467_15129872_+]; intron [3l_15127826_15129466_+]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATTCTACAAGTTAACTGGAATTTATAAAATTTCGAGCCCTATATATAAGAATTTTTTAAAATGATTAGTCTAATTATAAGATAAACTTCCTTCCTAGAAAGAAGCTTTATAAATTGCTGTTCTGATTTTGGGAGTAGAAATAATATAAAAATGTTCTCATGAAAGTAACTAATTAATTAATAAATTGTTGGACTTTCTAGGACCATTCTCAGCTTGAAGCTGGCCAACATTATGAATGATGCTGCCATGA
**************************************************..........(((((((...))))))).......((((((....(((((...(((..........))).))))).....)))))).........................((((((..(((((.((((....)))))))))))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M023
head
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 GSM343915
embryo
 O001
Testis
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 M053
female body
..........................................................................................................................................................................................GTTGGACTTTCTAGGACC.............................................. 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................ATTATGAATGATGCTGCC.... 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TTTCTAGGACCATCGTAA....................................... 18 3 20 1.65 33 2 13 5 0 0 0 11 1 0 1 0 0
.....................................................................................................................................................................................................TAGGACCATTCTCAGCTTGAA................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CTCAGCTTGAAGCTGGCCAAC...................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................ATTGTTGGACTTTCTAGGACC.............................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................ACCATTCTCAGCTTGAAGC.............................. 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................ACTTTCTAGGACCATTCTCAC...................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................ATTAATTAATAAATTGTTGGACT........................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AATTAATAAATTGTTGGCGTTT...................................................... 22 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TAATTAATTAATCAAATGTTAGA.......................................................... 23 3 6 0.50 3 0 0 3 0 0 0 0 0 0 0 0 0
........AGTGAACTGGAATTTAGAAGA............................................................................................................................................................................................................................. 21 3 5 0.40 2 0 0 2 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................ATTATGAATGATGCCGCC.... 18 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................TCTGATTTTGGGAGTAGGATA............................................................................................................. 21 3 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TTTCTAGGACCATCGT......................................... 16 2 20 0.30 6 0 0 5 0 0 0 0 0 0 1 0 0
...CTACAAGTTGACTGGTACT.................................................................................................................................................................................................................................... 19 3 9 0.22 2 0 0 0 0 0 0 2 0 0 0 0 0
..................................................................................................................................................................................AATAAATTGTGGAACTTTCTTG.................................................. 22 3 6 0.17 1 0 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................GGTCTGATTGTGGGAGTA.................................................................................................................. 18 2 7 0.14 1 0 0 0 0 0 0 0 0 1 0 0 0
.........................................................................................................................................................................................................ACCATTAGCAGCTTGGAGCT............................. 20 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 1 0
......................................................................................................................................................................................AATTGTGGGACTTTCTTG.................................................. 18 2 10 0.10 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................AGAAGAATTTTTTAAAA............................................................................................................................................................................................. 17 1 10 0.10 1 0 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................................................................AATTGTTGAACTTTCTTG.................................................. 18 2 20 0.10 2 0 0 0 0 1 0 0 0 0 0 0 1
...............TGGAATTTAAAAAATTTTGGGC..................................................................................................................................................................................................................... 22 3 10 0.10 1 0 0 0 0 1 0 0 0 0 0 0 0
.................................................AGGTTTTTAAAGTGATTAGTC.................................................................................................................................................................................... 21 3 10 0.10 1 0 0 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................TGTTCTGATGTTGTGAG.................................................................................................................... 17 2 10 0.10 1 0 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................................ATAACTAGTTGCACTTTCTA................................................... 20 3 14 0.07 1 0 0 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................AGCTCTGATTTTGGGGGTA.................................................................................................................. 19 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................TGTTGGAGATTCTAGG................................................. 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

TAAGATGTTCAATTGACCTTAAATATTTTAAAGCTCGGGATATATATTCTTAAAAAATTTTACTAATCAGATTAATATTCTATTTGAAGGAAGGATCTTTCTTCGAAATATTTAACGACAAGACTAAAACCCTCATCTTTATTATATTTTTACAAGAGTACTTTCATTGATTAATTAATTATTTAACAACCTGAAAGATCCTGGTAAGAGTCGAACTTCGACCGGTTGTAATACTTACTACGACGGTACT
**************************************************..........(((((((...))))))).......((((((....(((((...(((..........))).))))).....)))))).........................((((((..(((((.((((....)))))))))))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
......................................................................................................................................................................................................TCCTGGTAAGAGTCGGACTT................................ 20 1 1 1.00 1 1 0 0 0
TAAGATGTTCAATTGACCTTA..................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
...................................................................................................................................................................................................AGACCCTGGTAAGAGTGGAAGT................................. 22 3 2 1.00 2 0 2 0 0
...................................................................................................................................................................................................AGGTCCTGGTAAGAG........................................ 15 1 9 0.11 1 0 0 1 0
...............................................................................................................................................ATATTTTTGCAAGTGTAC......................................................................................... 18 2 12 0.08 1 0 0 1 0
.......................................................................................AGGAAGGATGTTTCT.................................................................................................................................................... 15 1 12 0.08 1 0 0 0 1
............TGGACCTTAAATATT............................................................................................................................................................................................................................... 15 1 18 0.06 1 0 1 0 0
.....................................GGCTATAGATTCTTAAA.................................................................................................................................................................................................... 17 2 19 0.05 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:15129267-15129516 + dsi_2028 ATTCTACAAGTT----AACTGGAATTT-ATAAAATTTCGAGCCCTATA--------------------------------------TATAAGAATTTTTTAAAATGAT----------------------------------------------------------------------------------------TA--------------GTCTAA----------TTATAAGATAAACTTCCTTC-----------------CTAGAAAGAAGCTTTATAAATTGCTGTTCTGATT---------------TTGGGAGTAGA---AATAA----TATAA-AAATGTTCT-----------------------------------------------------------------------------------------------------CAT---GAAAGTAACTAATTAATTAATAAATT---------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGGACTTTCTAGGACCATTCTCAGCTTGAAGCTGGCCAACATTATGAATGATGCTGCCATGA
droSec2 scaffold_0:7605153-7605322 + ATTCTACAAGTT----AACTGGAATTT-ATAAAATTTCGAGCCATATA--------------------------------------TATAAGAATTTTTTAAAATGAA----------------------------------------------------------------------------------------TA--------------ATCCAA----------TTTTAAGAAAAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----AGTACCGAATTAATAAATT---------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGGACTTTCTAGGACCGTTCTCAGCTTGAAGCTGGCCAACATTATGAATGATGCTGCCATGA
dm3 chr3L:15495776-15495986 + TATCTACAAGTT----AACTGGAATTT-ATAAAATTTCCAGCCTTATA--------------------------------------TTGAAGAATATTTTAAAATGAA----------------------------------------------------------------------------------------TAT-----------------------------------------------------------------------------------------------------------------------G---------AATGG-------------------------------------------------------------------TAACAGTATTACATTTTTGTTTAAATATAAAAACCAAATTTTGTCCTAA-----AT---TAA----AGTAACTAATTAACAAATT---------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGAACTTTCTAGGACCGTTCTCAGCTTGAAGCTGGCCAACATTATGAATGATGCTGCCATGA
droEre2 scaffold_4784:17751645-17751911 + ATTTTATAAGAT----AACTGGAATTT-ATAATATTTCTAGCTTTATA--------------------------------------TACAAGAACTTTATAAATTAATGACAT---------------------------------------------------------------------------------------AAAGGTTTCTTAGCTCAAACAA--------------------------TTAATTTTTGGAAAACACAA----------------------------TTT---------------TTGGGAGCAT----------------------------------------------------------------------------TATCAGCATTACATTTGTTTTCAAATGCAATAGCCTATTTTCCGTTCAATTTAAAT---GAA----AGTGATTTATTAACAAATT---------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGGACCTTCAAGGACGATTCTCAGCTTAAAGCTGGCAAACATTATGAATGATGCTGCCATGA
droYak3 3L:18011001-18011284 + ATTTCAAAAACT----AACTGGAATTC-ATATAATATCAAGCCTTTTA--------------------------------------TACAAGAATTTTCTAAAG------------------------------------------------------------------------------------------------AATGCTTCATTAGCTCAA------------------------------CTAATTTTTGTAAAATATAAGAAAGAATCTCAATAAGTTCCTACTTCGATT---------------TTGGGAGTGGT---AAGGG-------------------------------------------------------------------TATCAGAATTACATTT----TTAGATACAATAGCCTATTTTCTTTCCAATTTACAT---CAA----AGTAATTTACAAATGAATC---------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGCACTTTCAAGGACCATTCTCAGCTTAAAGCTGGCCAGCATTATGAATGATGCTGCCATGA
droEug1 scf7180000408844:222016-222233 + ATTCTAGGC----------------------------------AGATATACGAATATTGCAATTTTCATTCGGAATTACTTTTATTTAAAGGAAGGAAATAAATCAAAGAAATTTAATTCG-----------------TTTGCA----------------------------------------------------TT-----TG-TTTTCTGCTTAAAGAATTTTCTTTGAAAGAATACC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----TTCCCCATATTAATAT-------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTCCTTCCCCATTCCAGGACCGTACTCAGCTTAAAGCTGGCAAACATAATGAACGATGCTGCCATGA
droBia1 scf7180000302334:909702-909945 - ATTTT-CAAATG----AATGGGAACTTGACATAAGTATCAGCTTT------------------------------------------------------------------------------------------------GAGTTACTTTATAATGTGTTTTTCTTTTAGTTTCCAGGGTTAATATAAAATAAAATATGAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCCTTTTCTTATATATTATTACGGATTTTATGGATCTTCATATGGTCATGA-----AATTTAACTTGAC-----------------------------------------------------------CCTAACAAAATACTTTCTTTCTTCCAGGACCGTTCTCAGCTTGAAGCTGGCAAACATTATGAACGATGCTGCCATGA
droTak1 scf7180000415795:910879-911201 + ATTTTACAAATG----CATTGGAATTT-AACA-----------------------------------------------------------------------------------------GCGAAAGAACTTTCAACTCTGGGT----------------------------------------------------------------------------------------------------------------------------------------------------TTAAGC---------------CTGAAGGGAAA---AATAA----TATACAAAATGGTCCCACTTTAGAAAATGAATTTAAAATTAGAAAATATATGTTCAGTATACTTCCTTGTATGTAGTATGTTTT-----------------------------------------------------------------------------------------------------------------------ACAAATGGA--TGACAGTGAATTCTATTTAATTCAAATTAAATTAACATCTATTAAATTATTATTAAATTTATTAAAAAACAAAGACATATTTAAATAAAATATTTTTCCTATTCCAGGACCGTGCTCAGCTTAAAGCTGGCCAACATTATGAACGATGCTGCCATGA
droEle1 scf7180000491000:879416-879471 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCAGGACCGTTCTCAGCTTAAAGCTGGCAAATATTATGAACGATGCTGCCATGA
droRho1 scf7180000779176:1410-1502 + TAACTAATA--------------ACCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-AACTGTTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTCTTTTACCATTCCAGAACCGTTCTCAGCTTAAAGCTGGCAAATGTCATGAACGATGCTGCCATGA
droFic1 scf7180000454065:1814039-1814231 - AAACAA--AGTTTTTGTATTGGAATTC-TGAAAAAGTTT-GTCG---------------------------------------------CAGAC----------C------------------------------------AAATATTTCTGTATCGCATTTTATCTTTA----TCAAAG--AATATATAACAACAAATGTATGCTCAATTTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTACCTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTACTTTTTCTATTTCAGGACAATTCTTAGCTTAAAGCTGGCCAACATCATGAACGATGCTGCCATGA
droKik1 scf7180000302686:1262729-1262947 - TTTTGTTAAGGA----AAGTTTTTTTT-TTCA-----------------------------------------------------------------------------------------AAAAGAAAACT---ATCTTTGAAT----------------------------------------------------------------------------------------------------------------------------------------------------TTATTATTGAAAAATTATAATTTGAGATTATAATATAAGCTAAA---AG-AAAAGGCCT--------------------------------------------------------------------------------------------------------AGAGTAAACTA---TT-A---AATAT--------A-CTAGCTAAAAACCCAACTCTTATATTTTGT------------------------------------------------------------------------------------------------------------------------TTTCCTTACTTTCCAGAACCGTTCTCAGCTTAAAGCTGGCCTACATCATGAACGATGCCGCCATGA
droAna3 scaffold_13337:17366661-17366726 - TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGCCTTTCCAGGACCGTTCTCAGCTTGAAGCTGGCTTACATCATGAATGATGCTGCGATGA
droBip1 scf7180000396741:668133-668255 - AATA-------------------ATTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GG-AAAGGCCCT--------------------------------------------------------------------------------------------------------TCTGTAGGCCCTTATTTA---AATAT--------A-TTTCCAATAAAC----------------------------------------------------------------------------------------------------------------------------------------CCTTTTTTTCCTTTCCAGGACTGTTCTCAGCTTGAAGCTGGCTTACATCATGAATGATGCTGCTATGA
dp5 XR_group6:255897-255952 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCAGAACGGTTCTCAGCTTGAAGCTGGCCAATATTATGAATGATGCTGCCATGA
droPer2 scaffold_12:943100-943155 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCAGAACGGTTCTCAGCTTGAAGCTGGCCAATATTATGAATGATGCTGCCATGA
droWil2 scf2_1100000004768:447173-447232 - G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTTCAGAACTGTTCTCAGTTTAAAACTGGCCTATATTATGAACGATGCTGCCATGA
droVir3 scaffold_13049:20273197-20273290 + ATTA-------------------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTAAATAATTGTTTGTATTTTCTCAAA----------------------------------------------------------------------------------------------------------------------------------------------------AACCCACAGCACAGTTCTTAGCTTGAAGCTGGGCCAATTGATGGGCGATCAGCCAATGA
droMoj3 scaffold_6680:7976215-7976267 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGAACCGTGCTCAGCTTAAAGCTGGGTCAGATTATGGGCGATCAGCCCATGA
droGri2 scaffold_5168:6148-6199 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCACTGTGCTGAGCGTAAAACTGGGTCAAGTGATGGGTGACCAGCCAATGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATTCTACAAGTT----AACTGGAATTT-ATAAAATTTCGAGCCCTATA--------------------------------------TATAAGAATTTTTTAAAATGAT----------------------------------------------------------------------------------------TA--------------GTCTAA----------TTATAAGATAAACTTCCTTC-----------------CTAGAAAGAAGCTTTATAAATTGCTGTTCTGATT---------------TTGGGAGTAGA---AATAA----TATAA-AAATGTTCT-----------------------------------------------------------------------------------------------------CAT---GAAAGTAACTAATTAATTAATAAATT---------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGGACTTTCTAGGACCATTCTCAGCTTGAAGCTGGCCAACATTATGAATGATGCTGCCATGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGACTTTCTAGGACC..............................................1812.00200200000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATGAATGATGCTGCC....1812.00200200000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGACCATTCTCAGCTTGAA................................2111.00110000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAGCTTGAAGCTGGCCAAC......................2111.00100001000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATT---------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGGACTTTCTAGGACC..............................................2111.00100100000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCATTCTCAGCTTGAAGC..............................1911.00100000000000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTCTAGGACCATTCTCAC......................................2111.00110000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAATTAATAAATT---------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGGACT........................................................2311.00100100000000000000
droSec2
ATTCTACAAGTT----AACTGGAATTT-ATAAAATTTCGAGCCATATA--------------------------------------TATAAGAATTTTTTAAAATGAA----------------------------------------------------------------------------------------TA--------------ATCCAA----------TTTTAAGAAAAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----AGTACCGAATTAATAAATT---------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGGACTTTCTAGGACCGTTCTCAGCTTGAAGCTGGCCAACATTATGAATGATGCTGCCATGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCTGGCCAACATTATG................1811.0011000
dm3
TATCTACAAGTT----AACTGGAATTT-ATAAAATTTCCAGCCTTATA--------------------------------------TTGAAGAATATTTTAAAATGAA----------------------------------------------------------------------------------------TAT-----------------------------------------------------------------------------------------------------------------------G---------AATGG-------------------------------------------------------------------TAACAGTATTACATTTTTGTTTAAATATAAAAACCAAATTTTGTCCTAA-----AT---TAA----AGTAACTAATTAACAAATT---------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGAACTTTCTAGGACCGTTCTCAGCTTGAAGCTGGCCAACATTATGAATGATGCTGCCATGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTAGGACCGTTCTCAGCT....................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAAGCTGGCCAACATTATG................2113.0030000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................AATGAA----------------------------------------------------------------------------------------TAT-----------------------------------------------------------------------------------------------------------------------G---------AATGG-------------------------------------------------------------------TAACAG..............................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCAACATTATGAATGAT..........1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTCCTAA-----AT---TAA----AGTAACTAATT.......................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTTCTAGGACCGTTCTCAGC.....................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAATGATGCTGCCAT..1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AAAATTTCCAGCCTTATA--------------------------------------TTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATGAATGATGCTGCCAT..2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTCTAGGACCGTTCT.........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATGAATGATGCTGCCATG.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................AAAATGAA----------------------------------------------------------------------------------------TAT-----------------------------------------------------------------------------------------------------------------------G---------AATGG-------------------------------------------------------------------TAAC................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAGCTTGAAGCTGGCC.........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAGGACCGTTCTCAGCTTG..................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGGACCGTTCTCAGCTT...................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATGAATGATGCTGCCA...1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAATGATGCTGCCATG.1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATTTTGTCCTAA-----AT---TAA----AG................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATGAATGATGCTGCC....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTCAGCTTGAAGCTGGCCAAC......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCTGGCCAACATTATGAATGA...........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTCTAGGACCGTTCTCAG......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAACTTTCTAGGACCGTT...........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
......................................................................................................AATGAA----------------------------------------------------------------------------------------TAT-----------------------------------------------------------------------------------------------------------------------G---------AATGG-------------------------------------------------------------------TAT.................................................................................................................................................................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................AATGAA----------------------------------------------------------------------------------------TAT-----------------------------------------------------------------------------------------------------------------------G---------AATGG-------------------------------------------------------------------TATG................................................................................................................................................................................................................................................................................................................19160.1930000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATT---------------------------------------------------------------------------------------------------------------------------------------------------------------GTTGAACTTTCTAGCT................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
droEre2
ATTTTATAAGAT----AACTGGAATTT-ATAATATTTCTAGCTTTATA--------------------------------------TACAAGAACTTTATAAATTAATGACAT---------------------------------------------------------------------------------------AAAGGTTTCTTAGCTCAAACAA--------------------------TTAATTTTTGGAAAACACAA----------------------------TTT---------------TTGGGAGCAT----------------------------------------------------------------------------TATCAGCATTACATTTGTTTTCAAATGCAATAGCCTATTTTCCGTTCAATTTAAAT---GAA----AGTGATTTATTAACAAATT---------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGGACCTTCAAGGACGATTCTCAGCTTAAAGCTGGCAAACATTATGAATGATGCTGCCATGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATGAATGATGCTGCCAT..1911.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGATTCTCAGCTTAAAGCTGGC..........................2411.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATGAATGATGCTGCCAT..2011.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACATTATGAATGATGCTGCC....2211.0010100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACATTATGAATGATGCT.......2011.0010000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATGAATGATGCTGCC....1811.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACATTATGAATGATGCTGC.....2111.0010001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATGAATGATGCTGCCA...1911.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT---------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGGACCTTCAAGGACGA.............................................2111.0011000000
droYak3
ATTTCAAAAACT----AACTGGAATTC-ATATAATATCAAGCCTTTTA--------------------------------------TACAAGAATTTTCTAAAG------------------------------------------------------------------------------------------------AATGCTTCATTAGCTCAA------------------------------CTAATTTTTGTAAAATATAAGAAAGAATCTCAATAAGTTCCTACTTCGATT---------------TTGGGAGTGGT---AAGGG-------------------------------------------------------------------TATCAGAATTACATTT----TTAGATACAATAGCCTATTTTCTTTCCAATTTACAT---CAA----AGTAATTTACAAATGAATC---------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGCACTTTCAAGGACCATTCTCAGCTTAAAGCTGGCCAGCATTATGAATGATGCTGCCATGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTCAGCTTAAAGCTGGCCAGC......................2421.00201100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACAAATGAATC---------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGCACTTTCAAG..................................................2721.00220000000000
....CAAAAACT----AACTGGAATTC-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTACAAATGAATC---------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGCAC.........................................................2320.50110000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCAGCTTAAAGCTGGCCAGC......................2220.50100100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCATTCTCAGCTTAAAGCTGGCCAGC......................2820.50100100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTAAAGCTGGCCAGCAT....................2020.50100000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCTCAGCTTAAAGCTGGCCAGC......................2520.50100100000000
.......................................................................................................................................................................................................................................................................................................GATT---------------TTGGGAGTGGT---AAGGG-------------------------------------------------------------------TATCA...............................................................................................................................................................................................................................................................................................................2520.50100000010000
droEug1
ATTCTAGGC----------------------------------AGATATACGAATATTGCAATTTTCATTCGGAATTACTTTTATTTAAAGGAAGGAAATAAATCAAAGAAATTTAATTCG-----------------TTTGCA----------------------------------------------------TT-----TG-TTTTCTGCTTAAAGAATTTTCTTTGAAAGAATACC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----TTCCCCATATTAATAT-------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTCCTTCCCCATTCCAGGACCGTACTCAGCTTAAAGCTGGCAAACATAATGAACGATGCTGCCATGASizeHit CountTotal NormTotal
No Reads
droBia1
ATTTT-CAAATG----AATGGGAACTTGACATAAGTATCAGCTTT------------------------------------------------------------------------------------------------GAGTTACTTTATAATGTGTTTTTCTTTTAGTTTCCAGGGTTAATATAAAATAAAATATGAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCCTTTTCTTATATATTATTACGGATTTTATGGATCTTCATATGGTCATGA-----AATTTAACTTGAC-----------------------------------------------------------CCTAACAAAATACTTTCTTTCTTCCAGGACCGTTCTCAGCTTGAAGCTGGCAAACATTATGAACGATGCTGCCATGASizeHit CountTotal NormTotal
No Reads
droTak1
ATTTTACAAATG----CATTGGAATTT-AACA-----------------------------------------------------------------------------------------GCGAAAGAACTTTCAACTCTGGGT----------------------------------------------------------------------------------------------------------------------------------------------------TTAAGC---------------CTGAAGGGAAA---AATAA----TATACAAAATGGTCCCACTTTAGAAAATGAATTTAAAATTAGAAAATATATGTTCAGTATACTTCCTTGTATGTAGTATGTTTT-----------------------------------------------------------------------------------------------------------------------ACAAATGGA--TGACAGTGAATTCTATTTAATTCAAATTAAATTAACATCTATTAAATTATTATTAAATTTATTAAAAAACAAAGACATATTTAAATAAAATATTTTTCCTATTCCAGGACCGTGCTCAGCTTAAAGCTGGCCAACATTATGAACGATGCTGCCATGASizeHit CountTotal NormTotal
No Reads
droEle1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCAGGACCGTTCTCAGCTTAAAGCTGGCAAATATTATGAACGATGCTGCCATGASizeHit CountTotal NormTotal
No Reads
droRho1
TAACTAATA--------------ACCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-AACTGTTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTCTTTTACCATTCCAGAACCGTTCTCAGCTTAAAGCTGGCAAATGTCATGAACGATGCTGCCATGASizeHit CountTotal NormTotal
No Reads
droFic1
AAACAA--AGTTTTTGTATTGGAATTC-TGAAAAAGTTT-GTCG---------------------------------------------CAGAC----------C------------------------------------AAATATTTCTGTATCGCATTTTATCTTTA----TCAAAG--AATATATAACAACAAATGTATGCTCAATTTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTACCTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTACTTTTTCTATTTCAGGACAATTCTTAGCTTAAAGCTGGCCAACATCATGAACGATGCTGCCATGASizeHit CountTotal NormTotal
No Reads
droKik1
TTTTGTTAAGGA----AAGTTTTTTTT-TTCA-----------------------------------------------------------------------------------------AAAAGAAAACT---ATCTTTGAAT----------------------------------------------------------------------------------------------------------------------------------------------------TTATTATTGAAAAATTATAATTTGAGATTATAATATAAGCTAAA---AG-AAAAGGCCT--------------------------------------------------------------------------------------------------------AGAGTAAACTA---TT-A---AATAT--------A-CTAGCTAAAAACCCAACTCTTATATTTTGT------------------------------------------------------------------------------------------------------------------------TTTCCTTACTTTCCAGAACCGTTCTCAGCTTAAAGCTGGCCTACATCATGAACGATGCCGCCATGASizeHit CountTotal NormTotal
No Reads
droAna3
TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGCCTTTCCAGGACCGTTCTCAGCTTGAAGCTGGCTTACATCATGAATGATGCTGCGATGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATGAATGATGCTGCGAT..2012.002000020
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACATCATGAATGATGCTGCGAC..2311.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAATGATGCTGCGAC..1811.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCGTTCTCAGCTTGAA................................1811.001001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCAGGACCGTTCTCAGCT....................................2111.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAATGATGCTGCGAT..1811.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCGTTCTCAGCTTGAAGCTGGC..........................2411.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTACATCATGAATGATGCTGCGAT..2511.001000010
droBip1
AATA-------------------ATTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GG-AAAGGCCCT--------------------------------------------------------------------------------------------------------TCTGTAGGCCCTTATTTA---AATAT--------A-TTTCCAATAAAC----------------------------------------------------------------------------------------------------------------------------------------CCTTTTTTTCCTTTCCAGGACTGTTCTCAGCTTGAAGCTGGCTTACATCATGAATGATGCTGCTATGASizeHit CountTotal NormTotal
No Reads
dp5
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCAGAACGGTTCTCAGCTTGAAGCTGGCCAATATTATGAATGATGCTGCCATGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCAATATTATGAATGATGC........2111.0010010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTATGAATGATGCTGC.....1911.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAATATTATGAATGATGCTGC.....2211.0010010000000
droPer2
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCAGAACGGTTCTCAGCTTGAAGCTGGCCAATATTATGAATGATGCTGCCATGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCAATATTATGAATGAT..........1911.001001000
droWil2
G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTTCAGAACTGTTCTCAGTTTAAAACTGGCCTATATTATGAACGATGCTGCCATGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGGCCTATATTATGAACGAT..........2312.00200011
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCTATATTATGAACGATGCTGCC....2511.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAACGATGCTGCCATGA2011.00110000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCTATATTATGAACGAT..........1911.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTCTCAGTTTAAAACTG............................1911.00110000
droVir3
ATTA-------------------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTAAATAATTGTTTGTATTTTCTCAAA----------------------------------------------------------------------------------------------------------------------------------------------------AACCCACAGCACAGTTCTTAGCTTGAAGCTGGGCCAATTGATGGGCGATCAGCCAATGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGAAGCTGGGCCAATTGATGGGC.............2613.003000200000000000000000000000000000001000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGATGGGCGATCAGCC.....1911.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGCTGGGCCAATTGATG................2011.001000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTAGCTTGAAGCTGGGCC........................1911.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAATTGATGGGCGATCAGCCA....2311.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCTTGAAGCTGGGCCAATT....................2111.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTTCTTAGCTTGAAGCT.............................2011.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGAAGCTGGGCCAATTGA..................2111.001000000000000000100000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATTGATGGGCGATCAGC......1911.001000000000000010000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTAGCTTGAAGCTGGGCCA.......................2311.001000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTAGCTTGAAGCTGGGCC........................2211.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTAGCTTGAAGCTGGGCCA.......................2011.001000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCTGGGCCAATTGATGGGC.............2211.001000000000000000001000000000000000000000000000000000000000000000
droMoj3
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGAACCGTGCTCAGCTTAAAGCTGGGTCAGATTATGGGCGATCAGCCCATGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCACTGTGCTGAGCGTAAAACTGGGTCAAGTGATGGGTGACCAGCCAATGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTGTGCTGAGCGTAAA................................1820.50110
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGGTCAAGTGATGGGT.............1920.50101
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGCTGAGCGTAAAACTGGGT.........................2320.50101
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGGTCAAGTGATGGGTGACCA........2420.50101

Generated: 05/17/2015 at 02:57 PM