ID:

dsi_20252

 Coordinate:

x:20425374-20425523 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

0.0 0.2

Flybase annnotation

exon [x_20423901_20425757_+]; CDS [x_20423901_20425757_+]

No Repeatable elements found

Sense Strand Reads

##########################################################################################################################################################################################################################################################
ATTTACTAACCAATTCCAATCGATTGATCCCACTTCAAACGACGCACCACACCAACATCATGTACATCAACACCAATACCAACATCACCGCAAAATAACAACGACCATCAATAACACTCTGAACGAAAACCACACCACCGCCACAATTACAAACAACACTACCACGACCCCGTCTTGTTGTACCAAAACCATCGCCACAGATAGCCAAGTCTCGGTGTCGGTCTCGGCATCGGTGTCATCGGCCAACCCA
***********************************************************************************************************........................................................(((....))).**************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M023
head
 M053
female body
 SRR902008
ovaries
.................................................................................................................................................................................................................................GGCATCGGTGTCATCGGCC...... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................CGGCATCGGTGTCATCGGCC...... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GTCGGTCTCGGCATCGGT................ 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GTCGGTCTCGGCATCGGTGTCATCGGCC...... 28 0 1 2.00 2 2 0 0 0 0 0 0 0 0
...................................................................................................................................................TACAAACAACACTACCACGACCCCGTC............................................................................ 27 0 1 1.00 1 0 0 0 0 0 0 0 0 1
...........................................................................................................TCAATAACACTCTGAACGAAAACCACACC.................................................................................................................. 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TCGGTGTCGGTCTCGGCATC................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................TAGCCAAGTCTCGGTGTCGGTCTCGG....................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0
...............CCAATCGATTGATCCCACTTC...................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0
...........................................................................................................................................................................................................GCCAAGTCTCGGTGTCGGTCTCGG....................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................................................GCATCGGTGTCATCGGCCAACC.. 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0
...............................................................................................................................................................................TGTTGTACCAAAACCATCGCCACAGA................................................. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0
...............................................................................................................TAACACTCTGAACGAAAACCACACCAC................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.TTTACTAACCAATTCCAATCGATTGA............................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0
.............................................................................................ATTAACAACGACCATCAACA......................................................................................................................................... 20 2 2 0.50 1 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................................................GGTGTCGGTCTCGGA...................... 15 1 11 0.09 1 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................ACCGCGTGTTGTTGGACCA................................................................. 19 3 14 0.07 1 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................................GTCTCCGCATCGGTG............... 15 1 17 0.06 1 0 0 0 0 1 0 0 0 0
....................AGATTGATCCCCCTTCATA................................................................................................................................................................................................................... 19 3 19 0.05 1 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................................................................................GCATCGGTGACATCGTC....... 17 2 20 0.05 1 0 0 0 0 0 1 0 0 0
..................................................................................................................................................................................................................CCTGGTGTCGGTCTGGGCA..................... 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

TAAATGATTGGTTAAGGTTAGCTAACTAGGGTGAAGTTTGCTGCGTGGTGTGGTTGTAGTACATGTAGTTGTGGTTATGGTTGTAGTGGCGTTTTATTGTTGCTGGTAGTTATTGTGAGACTTGCTTTTGGTGTGGTGGCGGTGTTAATGTTTGTTGTGATGGTGCTGGGGCAGAACAACATGGTTTTGGTAGCGGTGTCTATCGGTTCAGAGCCACAGCCAGAGCCGTAGCCACAGTAGCCGGTTGGGT
****************************************************************************........................................................(((....))).*********************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 M025
embryo
 M024
male body
..................................................................................................GTTGCCGGTTGTTATTGTGAG................................................................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0
...................................................................................................TTGCTGGTAGTTATTGTGAGA.................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................TGGTAGCGGTGTCTATCGGTTCAGAGCCA.................................. 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..................................................................................................GTTGCTGGTAGTTATTGTG..................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................................................................................GCTGGTAATTATTGTGAGCA................................................................................................................................. 20 3 2 0.50 1 0 0 0 1 0 0 0 0 0
.................................................................................................TGTGGCTGGTTGTTATGGTGAG................................................................................................................................... 22 3 2 0.50 1 0 0 0 1 0 0 0 0 0
................................................................................................................................................TTAATGTTTGTTGCGATCG....................................................................................... 19 2 2 0.50 1 0 0 0 0 0 1 0 0 0
..................................AGTTTGATGGGTGGTGTG...................................................................................................................................................................................................... 18 2 4 0.25 1 0 0 0 0 0 0 1 0 0
......................................................................................................CCGGTTGTTATTGTGAGA.................................................................................................................................. 18 2 11 0.18 2 0 0 0 0 0 0 0 2 0
....................................................................................................GGCTGGTACTTATTGTAAGA.................................................................................................................................. 20 3 6 0.17 1 0 0 0 0 1 0 0 0 0
....TGATTAGTTAAGGTTAG..................................................................................................................................................................................................................................... 17 1 6 0.17 1 0 0 0 0 1 0 0 0 0
..............................................................ACGTAGTTTTGGTTATGG.......................................................................................................................................................................... 18 2 7 0.14 1 0 0 0 0 1 0 0 0 0
..................................................................TGCTGTGGTTATGGTTG....................................................................................................................................................................... 17 2 20 0.10 2 0 0 0 0 2 0 0 0 0
................................................................GTAGTTTTGGTTATGG.......................................................................................................................................................................... 16 1 11 0.09 1 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................................................AGCCGAAGCCACAGT............ 15 1 13 0.08 1 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................GTCGCGGTGTCTATCAGA........................................... 18 3 20 0.05 1 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................TCGTCGCGGTGTCTATCAG............................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:20425324-20425573 + dsi_20252 ATTTACTAACCAATTCCAATCGATTGATCCCACTTCAAACGACGCACCACAC---------CAACA---TCATGTACATCAA----------------------------------------------------------------------------------------------------------------------------------CACCAAT-----------------------------------------ACCAACA-------------------------------------------------------------------------------TCACCGC---AAAA---TAACAACGA-----------------------------------------------------------------------------CCATCA---------ATA------------------------ACACTCTGAACGAAAACCACACCACC------------GCCACAATTACAA------A------------------------CAACACTACCACGA---CCCCGTCTTGTTGTACCAAAACCATCGCCACAGATAGCCAAGTCTCGGTGTCGGTCTCGGCA------------------TCGGTGTCATCGGCCAACC---CA
droSec2 scaffold_55:64171-64421 + ATTTACTAACCAATTCCAATCGATTGATCCCACTTCAAACGACGCACCACAC---------CAACA---TCATGTACATCAA----------------------------------------------------------------------------------------------------------------------------------CACCAAT-----------------------------------------ACCAACA-------------------------------------------------------------------------------TCACCGC---AAAA---TAACAACGA-----------------------------------------------------------------------------CCATCA---------ATA------------------------ACACTCTGAACGAAAACCACACCACC------------GCCACAATTACAA------A------------------------CAACACTACCACGA---CCCCGTCTTGTTGTACCAAAACCATCGTCACAGATAGCCAAGTCTCGGTGTCGGTCTCGGCAT-----------------TCGATGTCATCGCATAATC---CA
dm3 chrX:21904269-21904521 + ATTTACTAACCAATTCCAATCGATTGATCCCACTTCAAACGACGCACCACAC---------CAACA---TCATGTACATCAA----------------------------------------------------------------------------------------------------------------------------------CACCAAT-----------------------------------------ACCAACA-------------------------------------------------------------------------------TCACCGA---AAAA---CAACAACGAC--------------------------------------------------------------------------CATCATCA---------ATA------------------------ACACTCTGAACGAAAACCACACCACC------------GCCACAATAACAA------A------------------------CAACACTACCACGA---CCCCGTCTTGTTGTACCAAAACCATCGCCACAGATAGCCAAGTCTCGGTGTCGGTCTCGGCA------------------TCGGTGTCATCGGCCAACG---CA
droEre2 scaffold_4690:18280587-18280920 + ATTTACTAACCAATTCCAATCGATCGATCCCAATTCAAACGACGCACCACAC---------CAACA---TCATGTACATCAA----------------------------------------------------------------------------------------------------------------------------------CACCAACACCAACACCACCT--------------C--CAATACCAACA-------CCAACACCA-ACATCTA------------------------------------------CATCAACATCAACATCAACATCACCAA---AACTCAA---CAACGACCATCGATCAACAACA-----------------------------------------------ACCGAATTCACGCACCATCA---------ATA------------------------ACACACTGAACGAAAACCACACCACC------------GCCACAATTACAA------A------------------------CAACACTACCACGA---CCCCGTCTTGTTGTACCAATACCATCGCCACAGATAGCCAAGTCTCGGTGTCGGTCTCGGCA------------------TCGGTGTCATCGGCCAACT---CG
droYak3 X:21347700-21348075 + ATTTACTAACCAATTCCAATCGATCGATCCCACTTCAAACGACGCACCACAC---------CAACA---TCATGTACATCAA----------------------------------------------------------------------------------------------------------------------------------CATCAACATCAACACCAACA--------------T--CAACACCAACA-------TCAACACCA-ACATCAACACCAACACCAACACCAAACCCAACACCAACACCAACACAAACATCAACATCAACACCAAAATCATAAA---AACTCCA---CAACATCCATCGATCAACAACA-----------------------------------------------ACGAAATTCACGCACCGTCA---------ATA------------------------ACACACTGAACGAAAACCACACCACC------------GCCACAATTACAA------A------------------------CAACACTACCACGA---CCCCTTCTTGTTGTACCAATACCATCGCCACAGATAGCCAAGTCTCGGTGTCGGTCTCGGCA------------------TCGGTGTCATCGGCCAACT---CG
droEug1 scf7180000407331:81495-81774 + ATTTACTAACCAATTCACATCGATTGATCCCACCTCAAACGACGCACCACAC---------CAATA---TCATAAACGTCAC----------------------------------------------------------------------------------------------------------------------------------CACAAAC-----------------------------------------ATTGCCA-------------------------------------------------------------------------------CCATCAA---AACACAA---CGACGATTAACGATCGTCCACA-----------------------------------------------ACAAAAATCATGCACCATCA---------ATA------------------------ATACACTTAACAAAAACACCACCACC------------GTCATAAATACAA------A------------------------TGCCTCTACCACGA---CCCCGTCTTGTTGTACCAATACCATCGCCACAGATAGCCAAGTCTCGGTATCGGTTTCGGCC------------------TCGGTGTCATCGGCCAACT---CG
droBia1 scf7180000302244:105630-105894 - ATTTACTAACCAATTCCAATCAATCGATCCCACCCCAAACGACGCACCACAC---------C---A---TCATGTACATCAA----------------------------------------------------------------------------------------------------------------------------------CACCC---------------------------------------------------------------------------------------------------------------------------------------A---AACCTAA---CAACGATCGCCGATCAACAACAACA--------------------------------------------CCAAACACCACGAATCACCC---------AAA------------------------ACACACTGATCGAAACCAACAACACC------------GCCACGAATACAA------A------------------------CACCACTACCACGA---CCCTGTCTTGTTGTACCAATACCATCGCCACAGATAGCCAAGTCTCGGTGTCAGTTTCGGCA------------------TCGGTGTCATCGGCCAACT---CG
droTak1 scf7180000415324:143582-143840 + ATTTACTAACCAATTCCAATCAATCGATCCCCCCTCAAACGACGCACCACAC---------C---A---TCATGTACATCAA----------------------------------------------------------------------------------------------------------------------------------CACCA---------------------------------------------------------------------------------------------------------------------------------------A---AACTTAA---CAACGATCATCGATCAACAACATCA--------------------------------------------ACAAACATCATGCACCATCA---------AAA------------------------ATACACTGAACGAAAACAAAACCACC------------GCCACAAATACAA------A------------------------CACCACTACCACGA---CCCTGTCTTGTTGTACCAATACCATCGCCACAGATAGCCAAGTCTCGG------TTTCGGCC------------------TCAGTGTCATCGGCCAACT---CG
droEle1 scf7180000491087:889455-889752 - ATTTACTAACCAATTCCAATCGATCGATCCCACCTCAAACGACGCACCACAC---------CAACA---TCATGAACATCAA----------------------------------------------------------------------------------------------------------------------------------CATCAAC-----------------------------------------------A-------------------------------------------------------------------------------TCACCATAAAAACTCAACAACAACGATCACCAATCAACAACAACA---------ACTACAACT--------------------------ACAAATATCATGCACCATGA---------ATA------------------------ACACACTGAACGAAAACACCACCACC---A---CCACCGCCACAAATACAA------A------------------------CACCACTACCACGA---CCCCGTCTTGTTGTACCACTACCATCGCCACAGATAGCCAAGTTTCGGTGTCGGTTTCGGCC------------------TCGGTGTCATCGGCCAACT---CG
droRho1 scf7180000778730:56626-56923 - ATTTACTAACCAATTCCAATCGATCGATCCCACCGCAAACGACGCACCACAC---------CAACA---TCATGAACATCAA----------------------------------------------------------------------------------------------------------------------------------CATCAAC----------------------------------ATCAAT-ACCAACA------TCA-C---------------------------------------------------------------------CACCAT---AACTCAA---CAACGATCACCGATCAACAACAACA--------------------------------------------ACAAATATCATGCACCTTCA---------ATA------------------------ATACACTGAACGAAAACACCACCACC------------GCCACAAATACAAATACAAA------------------------CACCACTACCACGA---CCCCGTCTTGTTGTACCACTACCATCGCCACAGATAGCCAAGTCTCGGTGTCGGTTTCGGCC------------------TCGGTGTCATCGGCCAACT---CG
droFic1 scf7180000454116:166495-166789 + ATTTACTAACCAATTCCAATCGATCGATCCCACCTCAAACGCCGCACCACAC---------CAACA---TC---------AC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCAA---AACTCGA---CAACGATCACCAATCAACAACCACA---------ACCACAACCGCAACC--------------------ACAACAATCATGCACCATCA---------ACA------------------------ATACACTGAACGAAAAC---ACCACCGCCACTGCCACTGCCACGAATACAAAAACAAATA------------------CCAACACCACTACCACGA---CCCCGTCTTGTTGTACCAATACCATCGCCACAGATAGCCAAGTCTCGGTGTCGGTTTCGGCC------------------TCGGTGTCATCGGCCAACT---CG
droKik1 scf7180000302577:1625709-1626033 + ATTTACTAACCAATTCCATTCGATCGGTCCCACCTCAACTGATGCACCACAACACCAACACC---A---ACATCCATATCAACACCAAACA----CACTCAACAATGCTCACCAACGGTCCACAACCACAACAACAACAACCATTATGTATCAACACACCAACCACCATTATCAA--------------------CA-----ACAACAACAACAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACA-CCA--CCACCAATTAC------------ATCAACACCAAC------------ACCACGAATACAAACA------------------------C---TGCCACTACCACGA---CCCCGTCTTGTTGTACCAATACCATCGCCACAGATAGCCAAGTTACGGTGTCGGTTTCGGCC------------------TCGGTATCCTCGGCCAACT---CT
droAna3 scaffold_13117:1916075-1916396 - ATTTACTAACCAACTCCAATCGATCGATCCCACCTCGACTAACGCACCACCA---------CCACACCAA-------------------------------------------------------------------------------------------------------------------------------CACTTACTCCAACAACATCAAC----------------------------------ATCAACA-------TCAACAACA-CC-A-----------------------------------------------------------------CTCTCTA---CAATCAA---CAACG--------------------------------------GCAA---CTGCAATCATCAATCAACAACAACCATCATTCACCAACA---------T-GAAACAATCAAACA--ACACCA----CTATCTCAACAA-----------------------CAATCACAAACTCAACAACAACCA------------------CAATCACAACCACTACGA---CCCCGTCTTGTTGTATCAACTCCATCGCCACAGATAGCCAAGTCTCGGTCTCGGTTTCGGCC------------------TCGGTCTCATCGGCGAACT---CG
droBip1 scf7180000396425:148508-148844 + ATTTACTAACCAACTCCAATCGATCGATCCCACCTCGACTAACGCACCACCA---------CCACA---ACC--------AC-----------------------------------------------AA-------------------------------CCACCACAACCACCACACCCACAACTACACCAA--CACTTACTCCAACAACATCAAC----------------------------------AACAACC-------ACAACAACACAC-TC---------------------------------------------------------------------TA---CAATCAA---CAACG--------------------------------------GCAA---CTGCAATCATCAATCAACAACAACCATCATCCACCAACA---------T-GAAACGATCAAATA--ACACCA----CAATCTCAACAACAA-----------------------------CCACAA------T------------------------CACAACCACTACGA---CCCCGTCTTGTTGTACCAACTCCATCGCCACAGATAGCCAAGTCTCGGTCTCGGTTTCGGCC------------------TCGGTCTCATCGGCGAACT---CG
dp5 XL_group1a:1109295-1109624 - ----------CAATTCAAATCGATCGATCCTTCCTCCTCTGACGCACACCAA---------CACCA---A------CACCAA----------------------------------------------------------------------------------------------------------------------------------CACCAAC------ACCAACATGAATACGCAATCTCATCAATACCAACG-------TCAACAACA-AT-TCTA------------------------------------------C--CAATA---------------------------------------------------------CCAAAATCAACTTCAACGACAATCACACCAATCATCAATCAAC-----CGATCATTCAACATAA---------T-GACACTAACA-CCA--ACACCAATAAC------------AACACCACCACC------------AACACTGATACAAACA------------------------CA---ACAACTACCACGACCACCCCGTCTTGTTGTACCAATACCATCGCCACAGATAGCACAGTTTCGGTGTCGGTATCGGCC------------------TCGGCCTCATCGGCCAACT---CG
droPer2 scaffold_26:1223548-1223875 - ATTTACTAACCAATTCAAATCGATCGATCCTTCCTCCTCTGACGCACACCAACACCAACACC---A---ACATGAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCAATCTCATCAATACCAACG-------TCAACAACA-AT-TCTA------------------------------------------C--CAATA---------------------------------------------------------CCAAAATCAACTTCAACGACAATCACACCAATCATCAATAAAC-----CGATCATTCAACATAA---------T-GACACTAACA-CCA--ACACCAATAAC------------AACACCACCACC------------AACACTGATACAAACA------------------------CA---ACAACTACCACGACCACCCCGTCTTGTTGTACCAATACCATCGCCACAGATAGCACAGTTTCGGTGTCGGTATCGGCC------------------TCGGCCTCATCGGCCAACT---CG
droWil2 scf2_1100000004909:7235804-7236140 + TTTTACTAACCAATTGAAATCGATTGATCCTTCCTCTACTGACGCACCACCA--C------CAACACCAA---CACAATCAC----------------------------------------------------------------------------------------------------------------------------AACCATCATCACC----------------------------------ACCAAAT-------ACA--------------------------------------------------------------------------------------AACACAA---CCACACTGATTGACCCACAT-----ACAAAATTGAATACAATTACAAATACAACTACCGTCAAA---------------CGAACCTTCCCCTCTTGTTATAA------CA-CCAATCCACC-----------------AACCACCTCAACT------------CCAACCAACACAACCACCAACACCAACACCACCACCACCACCATCGCAAC------------------------------------CACAACAGATAGCAACATTTCGGTCTCGGTATCGGCATCGGCCTCGGCCTCCGCATCGGTATCATCCGCTAATTCTTCG
droVir3 scaffold_12970:2016199-2016268 + AC---------------------------------------------AACAG---------CAACA---GCAGCAGCAGCAG----------------------------------------------------------------------------------------------------------------------------------CAGCAGC-----------------------------------------AACAACATCAGCTA-----------------------------------------------------------------------------------CAC---CAACAACCA-----------------------------------------------------------------------------ACGTCA---------GCA------------------------ACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6482:2518669-2518882 + CATTACTAATCAATTGAAACCAATCGATTCCCTCTCAATTGACGCACCAAAA---------CT-------TCTACACACCAC---CACAAACATTCAC---CCAATCCTGA-----CGTACACAAC--------------------------------------------------------------------------------------CAC-------------------------------------------------------------------------------------------------------------------------------------AATGA---ACAA---CAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------A------------------------CGTCACCACAACGT---CCCCGTCTTGTTGTACCAATACCATCGTCACAGATAGCAACGTTTCGGTCTCGGTATCGGCG------------------TCGGTATCATCGGCCAATT---CG
droGri2 scaffold_14853:8927974-8928050 - TAATACTAACCAATTTAAACCAATCGATCCCTCCCCAATTGACGCACCAAAA---------CAATA---CACCAACCACCAA----------------------------------------------------------------------------------------------------------------------------------CACCACC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATTTACTAACCAATTCCAATCGATTGATCCCACTTCAAACGACGCACCACAC---------CAACA---TCATGTACATCAA----------------------------------------------------------------------------------------------------------------------------------CACCAAT-----------------------------------------ACCAACA-------------------------------------------------------------------------------TCACCGC---AAAA---TAACAACGA-----------------------------------------------------------------------------CCATCA---------ATA------------------------ACACTCTGAACGAAAACCACACCACC------------GCCACAATTACAA------A------------------------CAACACTACCACGA---CCCCGTCTTGTTGTACCAAAACCATCGCCACAGATAGCCAAGTCTCGGTGTCGGTCTCGGCA------------------TCGGTGTCATCGGCCAACC---CASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCA------------------TCGGTGTCATCGGCC.........1912.00200200000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCA------------------TCGGTGTCATCGGCC.........2012.00200200000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGGTCTCGGCA------------------TCGGT...................1812.00200200000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGGTCTCGGCA------------------TCGGTGTCATCGGCC.........2812.00200200000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAA------A------------------------CAACACTACCACGA---CCCCGTC.................................................................................................2711.00100000000000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCA---------ATA------------------------ACACTCTGAACGAAAACCACACC....................................................................................................................................................................................2911.00100000001000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGTGTCGGTCTCGGCA------------------TC......................2011.00100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCCAAGTCTCGGTGTCGGTCTCGG............................................2611.00100000000100000000
...............CCAATCGATTGATCCCACTTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGTCTCGGTGTCGGTCTCGG............................................2411.00100000000010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA------------------TCGGTGTCATCGGCCAACC---..2211.00110000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTACCAAAACCATCGCCACAGA......................................................................2611.00100000000100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA------------------------ACACTCTGAACGAAAACCACACCAC..................................................................................................................................................................................2711.00100000001000000000
.TTTACTAACCAATTCCAATCGATTGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGTCGGTCTCGGA...........................................15110.09100000001000000000
droSec2
ATTTACTAACCAATTCCAATCGATTGATCCCACTTCAAACGACGCACCACAC---------CAACA---TCATGTACATCAA----------------------------------------------------------------------------------------------------------------------------------CACCAAT-----------------------------------------ACCAACA-------------------------------------------------------------------------------TCACCGC---AAAA---TAACAACGA-----------------------------------------------------------------------------CCATCA---------ATA------------------------ACACTCTGAACGAAAACCACACCACC------------GCCACAATTACAA------A------------------------CAACACTACCACGA---CCCCGTCTTGTTGTACCAAAACCATCGTCACAGATAGCCAAGTCTCGGTGTCGGTCTCGGCAT-----------------TCGATGTCATCGCATAATC---CASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACCATCGTCACAGATAGCCAAGTC............................................................2611.0010100
dm3
ATTTACTAACCAATTCCAATCGATTGATCCCACTTCAAACGACGCACCACAC---------CAACA---TCATGTACATCAA----------------------------------------------------------------------------------------------------------------------------------CACCAAT-----------------------------------------ACCAACA-------------------------------------------------------------------------------TCACCGA---AAAA---CAACAACGAC--------------------------------------------------------------------------CATCATCA---------ATA------------------------ACACTCTGAACGAAAACCACACCACC------------GCCACAATAACAA------A------------------------CAACACTACCACGA---CCCCGTCTTGTTGTACCAAAACCATCGCCACAGATAGCCAAGTCTCGGTGTCGGTCTCGGCA------------------TCGGTGTCATCGGCCAACG---CASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................CAACGAC--------------------------------------------------------------------------CATCATCA---------ATA------------------------ACACTCTGA..................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................CGA---AAAA---CAACAACGAC--------------------------------------------------------------------------CATCA..................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---CCCCGTCTTGTTGTACCAAAACCA................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGTGTCATCGGCCAACG---C.2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA------------------------ACACTCTGAACGAAAACCACACC....................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........AATTCCAATCGATTGATCCCACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TTCCAATCGATTGATCCCACTTCAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCA---------ATA------------------------ACACTCTGAACGAAAACCACA......................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTCTCGGTGTCGGTCTCGGC...........................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------TCGGTGTCATCGGCCAACG---..2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................CAACA-------------------------------------------------------------------------------TCACCGA---AAAA---CAACAACGAC--------------------------------------------------------------------------C......................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TCAAACGACGCACCACAC---------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATAGCCAAGTCTCGGT.......................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACCATCGCCACAGATAGCC.................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCTCGGCA------------------TCGGTGTCATCGGC..........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCA---------ATA------------------------ACACTCTGAACGAAAA...........................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TCGATTGATCCCACTTCAAACGACGCAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCCAAGTCTCGGTGTCGGTC................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGGTGTCGGTCTCGGCA------------------TCGG....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCTCGGTGTCGGTCTCGGCA------------------TCATC...................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCATCA---------ATA------------------------ACACTCTGAACGAAAACCA........................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCGGTCTCGGCA------------------TCGGTGT.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................TTGATCCCACTTCAAACGACGCACCACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TCGATTGATCCCACTTCAAACGACGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCACGA---CCCCGTCTTGTTGTACCAAAACC.................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................AAACGACGCACCACAC---------CAACA---TC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA------------------------ACACTCTGAACGAAAACCACACCACC------------.....................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCGTCTTGTTGTACCAAAACCATCG.............................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................CA---TCATGTACATCAA----------------------------------------------------------------------------------------------------------------------------------CACCAAT-----------------------------------------ACCAACC-------------------------------------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCA---------ATA------------------------ACACTCTGAACGAAAACCAC.......................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TCCAATCGATTGATCCCACTTCAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGCA------------------TCGGTGTCATCGGC..........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............TTCCAATCGATTGATCCCACTTCAAACGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAGCCAAGTCTCGGTGTC....................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCA---------ATA------------------------ACACTCTGAACGAAAAC..........................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCCAAGTCTCGGTGTCGGT.................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAGCCAAGTCTCGGTGTCGGTCTCGG............................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATA------------------------ACACTCTGAACGAAAACCACA......................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAAACCACACCACC------------GCCACA...............................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------TCGGTGTCATCGGCCAAC......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TCATGTACATCAA----------------------------------------------------------------------------------------------------------------------------------CACCAAT-----------------------------------------ACCAACA-------------------------------------------------------------------------------TC..........................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCGGTGTCGGTCTCGGCA------------------TC......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTGATCCCACTTCAAACGACGCACCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCCACAGATAGCCAAGTCTC..........................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTGTCATCGGCCAACG---CA2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATAGCCAAGTCTCGGTGTC....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCCAAGTCTCGGTGTCGGTCTCGGC...........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCTCGGCA------------------TCGGTGTCATC.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGGTCTCGGCA------------------TCGGTGTCAT..............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CAATTCCAATCGATTGATCCCACTTCAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGGCA------------------TCGGTGTCATCGGCCAACG---..2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCGGTGTCGGTCTCGGCA------------------TCGG....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........................................GACGCACCACAC---------CAACA---TCATGTACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACCACGA---CCCCGTCTTGTTGTACC.......................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................CCAAT-----------------------------------------ACCAACA-------------------------------------------------------------------------------TCACCG......................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---------ATA------------------------ACACTCTGAACGAAAACCACACCA...................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCCAAGTCTCGGTGTCGGTCTCGG............................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGATAGCCAAGTCTCGGTGTCG...................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTGATCCCACTTCAAACGACGCACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCGCCACAGATAGCCAAGTCTCGGTG......................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGATAGCCAAGTCTCGGTGTCGG..................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCCAAGTCTCGGTGTCGG..................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TCGATTGATCCCACTTCAAACGACG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGGCA------------------TCGGTGTCATCGGCCAACG---C.2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTGATCCCACTTCAAACGACGCACCACAC---------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---CCCCGTCTTGTTGTACCAAAAC..................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATA------------------------ACACTCTGAACGAAAACCACACC....................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCA---------ATA------------------------ACACTCTGAAC................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGGCA------------------TCGGTGTCATCGGCCAACG---..2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGATAGCCAAGTCTCGGTGTCG...................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCAAAACCATCGCCACAGATAGC..................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................CAACAACGAC--------------------------------------------------------------------------CATCATCA---------ATA------------------------ACACTCT....................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCGTCTTGTTGTACCAAAACCA................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTCTCGGTGTCGGTCTCGGCA------------------T.......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ATTTACTAACCAATTCCAATCGATCGATCCCAATTCAAACGACGCACCACAC---------CAACA---TCATGTACATCAA----------------------------------------------------------------------------------------------------------------------------------CACCAACACCAACACCACCT--------------C--CAATACCAACA-------CCAACACCA-ACATCTA------------------------------------------CATCAACATCAACATCAACATCACCAA---AACTCAA---CAACGACCATCGATCAACAACA-----------------------------------------------ACCGAATTCACGCACCATCA---------ATA------------------------ACACACTGAACGAAAACCACACCACC------------GCCACAATTACAA------A------------------------CAACACTACCACGA---CCCCGTCTTGTTGTACCAATACCATCGCCACAGATAGCCAAGTCTCGGTGTCGGTCTCGGCA------------------TCGGTGTCATCGGCCAACT---CGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGGTCTCGGCA------------------TCGGTGT.................2012.0020000200
............................................................................................................................................................................................................................................................................................................................................................................................CAACAACA-----------------------------------------------ACCGAATTCACGCACCATC................................................................................................................................................................................................................................................2711.0010000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGGTCTCGGCA------------------TCGGTGTC................2111.0010000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCGGTGTCGGTCTCGGCA------------------TCGGT...................2611.0010000010
.......................................................................................................................................................................................................................................................................................................................................................................TCAA---CAACGACCATCGATCAACAACA-----------------------------------------------AC.................................................................................................................................................................................................................................................................2811.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAGCCAAGTCTCGGTGTC....................................................2011.0010000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGGTCTCGGCA------------------TCGGTGTCATCGGC..........2711.0010100000
droYak3
ATTTACTAACCAATTCCAATCGATCGATCCCACTTCAAACGACGCACCACAC---------CAACA---TCATGTACATCAA----------------------------------------------------------------------------------------------------------------------------------CATCAACATCAACACCAACA--------------T--CAACACCAACA-------TCAACACCA-ACATCAACACCAACACCAACACCAAACCCAACACCAACACCAACACAAACATCAACATCAACACCAAAATCATAAA---AACTCCA---CAACATCCATCGATCAACAACA-----------------------------------------------ACGAAATTCACGCACCGTCA---------ATA------------------------ACACACTGAACGAAAACCACACCACC------------GCCACAATTACAA------A------------------------CAACACTACCACGA---CCCCTTCTTGTTGTACCAATACCATCGCCACAGATAGCCAAGTCTCGGTGTCGGTCTCGGCA------------------TCGGTGTCATCGGCCAACT---CGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCACCGTCA---------ATA------------------------ACACACTGAACGA..............................................................................................................................................................................................2714.00400000000004
.........................................................................................................................................................................................................................................................................................................................................................................................GATCAACAACA-----------------------------------------------ACGAAATTCACGCACCGT.................................................................................................................................................................................................................................................2911.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGGTCTCGGCA------------------TCGGTGTC................2111.00100000010000
.........................................................................................................................................................................................................................................................................................................................................CAACATCAACACCAAAATCAT........................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGTCTCGGCA------------------TCGGTGTC................2011.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGGTCTCGGCA------------------TCGGTGTCATCGGC..........2711.00101000000000
droEug1
ATTTACTAACCAATTCACATCGATTGATCCCACCTCAAACGACGCACCACAC---------CAATA---TCATAAACGTCAC----------------------------------------------------------------------------------------------------------------------------------CACAAAC-----------------------------------------ATTGCCA-------------------------------------------------------------------------------CCATCAA---AACACAA---CGACGATTAACGATCGTCCACA-----------------------------------------------ACAAAAATCATGCACCATCA---------ATA------------------------ATACACTTAACAAAAACACCACCACC------------GTCATAAATACAA------A------------------------TGCCTCTACCACGA---CCCCGTCTTGTTGTACCAATACCATCGCCACAGATAGCCAAGTCTCGGTATCGGTTTCGGCC------------------TCGGTGTCATCGGCCAACT---CGSizeHit CountTotal NormTotal
No Reads
droBia1
ATTTACTAACCAATTCCAATCAATCGATCCCACCCCAAACGACGCACCACAC---------C---A---TCATGTACATCAA----------------------------------------------------------------------------------------------------------------------------------CACCC---------------------------------------------------------------------------------------------------------------------------------------A---AACCTAA---CAACGATCGCCGATCAACAACAACA--------------------------------------------CCAAACACCACGAATCACCC---------AAA------------------------ACACACTGATCGAAACCAACAACACC------------GCCACGAATACAA------A------------------------CACCACTACCACGA---CCCTGTCTTGTTGTACCAATACCATCGCCACAGATAGCCAAGTCTCGGTGTCAGTTTCGGCA------------------TCGGTGTCATCGGCCAACT---CGSizeHit CountTotal NormTotal
No Reads
droTak1
ATTTACTAACCAATTCCAATCAATCGATCCCCCCTCAAACGACGCACCACAC---------C---A---TCATGTACATCAA----------------------------------------------------------------------------------------------------------------------------------CACCA---------------------------------------------------------------------------------------------------------------------------------------A---AACTTAA---CAACGATCATCGATCAACAACATCA--------------------------------------------ACAAACATCATGCACCATCA---------AAA------------------------ATACACTGAACGAAAACAAAACCACC------------GCCACAAATACAA------A------------------------CACCACTACCACGA---CCCTGTCTTGTTGTACCAATACCATCGCCACAGATAGCCAAGTCTCGG------TTTCGGCC------------------TCAGTGTCATCGGCCAACT---CGSizeHit CountTotal NormTotal
No Reads
droEle1
ATTTACTAACCAATTCCAATCGATCGATCCCACCTCAAACGACGCACCACAC---------CAACA---TCATGAACATCAA----------------------------------------------------------------------------------------------------------------------------------CATCAAC-----------------------------------------------A-------------------------------------------------------------------------------TCACCATAAAAACTCAACAACAACGATCACCAATCAACAACAACA---------ACTACAACT--------------------------ACAAATATCATGCACCATGA---------ATA------------------------ACACACTGAACGAAAACACCACCACC---A---CCACCGCCACAAATACAA------A------------------------CACCACTACCACGA---CCCCGTCTTGTTGTACCACTACCATCGCCACAGATAGCCAAGTTTCGGTGTCGGTTTCGGCC------------------TCGGTGTCATCGGCCAACT---CGSizeHit CountTotal NormTotal
No Reads
droRho1
ATTTACTAACCAATTCCAATCGATCGATCCCACCGCAAACGACGCACCACAC---------CAACA---TCATGAACATCAA----------------------------------------------------------------------------------------------------------------------------------CATCAAC----------------------------------ATCAAT-ACCAACA------TCA-C---------------------------------------------------------------------CACCAT---AACTCAA---CAACGATCACCGATCAACAACAACA--------------------------------------------ACAAATATCATGCACCTTCA---------ATA------------------------ATACACTGAACGAAAACACCACCACC------------GCCACAAATACAAATACAAA------------------------CACCACTACCACGA---CCCCGTCTTGTTGTACCACTACCATCGCCACAGATAGCCAAGTCTCGGTGTCGGTTTCGGCC------------------TCGGTGTCATCGGCCAACT---CGSizeHit CountTotal NormTotal
No Reads
droFic1
ATTTACTAACCAATTCCAATCGATCGATCCCACCTCAAACGCCGCACCACAC---------CAACA---TC---------AC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCAA---AACTCGA---CAACGATCACCAATCAACAACCACA---------ACCACAACCGCAACC--------------------ACAACAATCATGCACCATCA---------ACA------------------------ATACACTGAACGAAAAC---ACCACCGCCACTGCCACTGCCACGAATACAAAAACAAATA------------------CCAACACCACTACCACGA---CCCCGTCTTGTTGTACCAATACCATCGCCACAGATAGCCAAGTCTCGGTGTCGGTTTCGGCC------------------TCGGTGTCATCGGCCAACT---CGSizeHit CountTotal NormTotal
No Reads
droKik1
ATTTACTAACCAATTCCATTCGATCGGTCCCACCTCAACTGATGCACCACAACACCAACACC---A---ACATCCATATCAACACCAAACA----CACTCAACAATGCTCACCAACGGTCCACAACCACAACAACAACAACCATTATGTATCAACACACCAACCACCATTATCAA--------------------CA-----ACAACAACAACAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACA-CCA--CCACCAATTAC------------ATCAACACCAAC------------ACCACGAATACAAACA------------------------C---TGCCACTACCACGA---CCCCGTCTTGTTGTACCAATACCATCGCCACAGATAGCCAAGTTACGGTGTCGGTTTCGGCC------------------TCGGTATCCTCGGCCAACT---CTSizeHit CountTotal NormTotal
No Reads
droAna3
ATTTACTAACCAACTCCAATCGATCGATCCCACCTCGACTAACGCACCACCA---------CCACACCAA-------------------------------------------------------------------------------------------------------------------------------CACTTACTCCAACAACATCAAC----------------------------------ATCAACA-------TCAACAACA-CC-A-----------------------------------------------------------------CTCTCTA---CAATCAA---CAACG--------------------------------------GCAA---CTGCAATCATCAATCAACAACAACCATCATTCACCAACA---------T-GAAACAATCAAACA--ACACCA----CTATCTCAACAA-----------------------CAATCACAAACTCAACAACAACCA------------------CAATCACAACCACTACGA---CCCCGTCTTGTTGTATCAACTCCATCGCCACAGATAGCCAAGTCTCGGTCTCGGTTTCGGCC------------------TCGGTCTCATCGGCGAACT---CGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCAAGTCTCGGTCTCGGTTTC..............................................2311.001010000
......................................................................................................................................................................................................................................................................................................................................................................ATCAA---CAACG--------------------------------------GCAA---CTGCAATCATCA..........................................................................................................................................................................................................................................................................2611.001000001
........................................................................................................................................................................................................................................................................................A-----------------------------------------------------------------CTCTCTA---CAATCAA---CAACG--------------------------------------GCAA---CT....................................................................................................................................................................................................................................................................................2611.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCTCGGTTTCGGCC------------------TCGGT...................2111.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCATCAATCAACAACAACCA............................................................................................................................................................................................................................................................2311.001010000
................................................ACCA---------CCACACCAA-------------------------------------------------------------------------------------------------------------------------------CACTTACTCCAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCACAGATAGCCAAGTCTCGGT.......................................................2411.001100000
droBip1
ATTTACTAACCAACTCCAATCGATCGATCCCACCTCGACTAACGCACCACCA---------CCACA---ACC--------AC-----------------------------------------------AA-------------------------------CCACCACAACCACCACACCCACAACTACACCAA--CACTTACTCCAACAACATCAAC----------------------------------AACAACC-------ACAACAACACAC-TC---------------------------------------------------------------------TA---CAATCAA---CAACG--------------------------------------GCAA---CTGCAATCATCAATCAACAACAACCATCATCCACCAACA---------T-GAAACGATCAAATA--ACACCA----CAATCTCAACAACAA-----------------------------CCACAA------T------------------------CACAACCACTACGA---CCCCGTCTTGTTGTACCAACTCCATCGCCACAGATAGCCAAGTCTCGGTCTCGGTTTCGGCC------------------TCGGTCTCATCGGCGAACT---CGSizeHit CountTotal NormTotal
No Reads
dp5
----------CAATTCAAATCGATCGATCCTTCCTCCTCTGACGCACACCAA---------CACCA---A------CACCAA----------------------------------------------------------------------------------------------------------------------------------CACCAAC------ACCAACATGAATACGCAATCTCATCAATACCAACG-------TCAACAACA-AT-TCTA------------------------------------------C--CAATA---------------------------------------------------------CCAAAATCAACTTCAACGACAATCACACCAATCATCAATCAAC-----CGATCATTCAACATAA---------T-GACACTAACA-CCA--ACACCAATAAC------------AACACCACCACC------------AACACTGATACAAACA------------------------CA---ACAACTACCACGACCACCCCGTCTTGTTGTACCAATACCATCGCCACAGATAGCACAGTTTCGGTGTCGGTATCGGCC------------------TCGGCCTCATCGGCCAACT---CGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................................................................................................................................................................................................................................................AAAATCAACTTCAACGACAAT........................................................................................................................................................................................................................................................................................2111.0010010000000
...............................................ACCAA---------CACCA---A------CACCAA----------------------------------------------------------------------------------------------------------------------------------CACCAAC------ACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.5010010000000
..............................................CACCAA---------CACCA---A------CACCAA----------------------------------------------------------------------------------------------------------------------------------CACCAAC------A....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.1410100000000
.............................................................CACCA---A------CACCAA----------------------------------------------------------------------------------------------------------------------------------CACCAAC------ACCAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.1410100000000
................................................................CA---A------CACCAA----------------------------------------------------------------------------------------------------------------------------------CACCAAC------ACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1020200000000
.................................................CAA---------CACCA---A------CACCAA----------------------------------------------------------------------------------------------------------------------------------CACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1020200000000
..............................................................ACCA---A------CACCAA----------------------------------------------------------------------------------------------------------------------------------CACCAAC------ACCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510010000000
droPer2
ATTTACTAACCAATTCAAATCGATCGATCCTTCCTCCTCTGACGCACACCAACACCAACACC---A---ACATGAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCAATCTCATCAATACCAACG-------TCAACAACA-AT-TCTA------------------------------------------C--CAATA---------------------------------------------------------CCAAAATCAACTTCAACGACAATCACACCAATCATCAATAAAC-----CGATCATTCAACATAA---------T-GACACTAACA-CCA--ACACCAATAAC------------AACACCACCACC------------AACACTGATACAAACA------------------------CA---ACAACTACCACGACCACCCCGTCTTGTTGTACCAATACCATCGCCACAGATAGCACAGTTTCGGTGTCGGTATCGGCC------------------TCGGCCTCATCGGCCAACT---CGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACAGTTTCGGTGTCGGTATCGGCC------------------TC......................2814.004400000
.................................CTCCTCTGACGCACACCAACACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGCACAGTTTCGGTGTCGGTATC..............................................2511.001100000
................................CCTCCTCTGACGCACACCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
droWil2
TTTTACTAACCAATTGAAATCGATTGATCCTTCCTCTACTGACGCACCACCA--C------CAACACCAA---CACAATCAC----------------------------------------------------------------------------------------------------------------------------AACCATCATCACC----------------------------------ACCAAAT-------ACA--------------------------------------------------------------------------------------AACACAA---CCACACTGATTGACCCACAT-----ACAAAATTGAATACAATTACAAATACAACTACCGTCAAA---------------CGAACCTTCCCCTCTTGTTATAA------CA-CCAATCCACC-----------------AACCACCTCAACT------------CCAACCAACACAACCACCAACACCAACACCACCACCACCACCATCGCAAC------------------------------------CACAACAGATAGCAACATTTCGGTCTCGGTATCGGCATCGGCCTCGGCCTCCGCATCGGTATCATCCGCTAATTCTTCGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................TACAACTACCGTCAAA---------------CGAACCTTCCCC.............................................................................................................................................................................................................................................2811.00101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCGGTCTCGGTATCGGCATC........................................2311.00101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCGGTCTCGGTATCGGC...........................................2011.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAGCAACATTTCGGTCTCGGT.................................................2311.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACATTTCGGTCTCGGTATCGGCAT.........................................2611.00100010
droVir3
AC---------------------------------------------AACAG---------CAACA---GCAGCAGCAGCAG----------------------------------------------------------------------------------------------------------------------------------CAGCAGC-----------------------------------------AACAACATCAGCTA-----------------------------------------------------------------------------------CAC---CAACAACCA-----------------------------------------------------------------------------ACGTCA---------GCA------------------------ACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................................................................................................................................................TA-----------------------------------------------------------------------------------CAC---CAACAACCA-----------------------------------------------------------------------------ACGTCA---------GCA------------------------A..........................................................................................................................................................................................................2420.501001000000000000000000000000000000000000000000000000000000000000
..................................................AG---------CAACA---GCAGCAGCAGCAG----------------------------------------------------------------------------------------------------------------------------------C.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.153000000000000000000000000000003000000000000000000000000000000000
.......................................................................AGCAGCAGCAG----------------------------------------------------------------------------------------------------------------------------------CAGCAGC-----------------------------------------AACAACATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2790.111000000000000000000000010000000000000000000000000000000000000000
...................................................G---------CAACA---GCAGCAGCAGCAG----------------------------------------------------------------------------------------------------------------------------------CA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000000000000000000000000002000000000000000000000000000000000000
...................................................G---------CAACA---GCAGCAGCAGCAG----------------------------------------------------------------------------------------------------------------------------------CAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.102002000000000000000000000000000000000000000000000000000000000000
..................................................AG---------CAACA---GCAGCAGCAGCAG----------------------------------------------------------------------------------------------------------------------------------CAGCAGC-----------------------------------------A.................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051001000000000000000000000000000000000000000000000000000000000000
AC---------------------------------------------AACAG---------CAACA---GCAGCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
.C---------------------------------------------AACAG---------CAACA---GCAGCAGCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000100000000000000000000000000000000000000
..........................................................................AGCAGCAG----------------------------------------------------------------------------------------------------------------------------------CAGCAGC-----------------------------------------AACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................A---GCAGCAGCAGCAG----------------------------------------------------------------------------------------------------------------------------------CAGCAGC-----------------------------------------AACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051001000000000000000000000000000000000000000000000000000000000000
................................................ACAG---------CAACA---GCAGCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000001000000000000000000000000000000000000000000000
..............................................................AACA---GCAGCAGCAGCAG----------------------------------------------------------------------------------------------------------------------------------CAGCAGC-----------------------------------------A.................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000000000000000000000000000000000010
...........................................................................GCAGCAG----------------------------------------------------------------------------------------------------------------------------------CAGCAGC-----------------------------------------AACAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000100000000000000000000000000000000000000000000000000000000000
AC---------------------------------------------AACAG---------CAACA---GCAGCAGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000010000000000000000000000000000000000
droMoj3
CATTACTAATCAATTGAAACCAATCGATTCCCTCTCAATTGACGCACCAAAA---------CT-------TCTACACACCAC---CACAAACATTCAC---CCAATCCTGA-----CGTACACAAC--------------------------------------------------------------------------------------CAC-------------------------------------------------------------------------------------------------------------------------------------AATGA---ACAA---CAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------A------------------------CGTCACCACAACGT---CCCCGTCTTGTTGTACCAATACCATCGTCACAGATAGCAACGTTTCGGTCTCGGTATCGGCG------------------TCGGTATCATCGGCCAATT---CGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAGATAGCAACGTTTCGGT.......................................................2211.001100000
droGri2
TAATACTAACCAATTTAAACCAATCGATCCCTCCCCAATTGACGCACCAAAA---------CAATA---CACCAACCACCAA----------------------------------------------------------------------------------------------------------------------------------CACCACC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 05:01 PM